View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6882_low_6 (Length: 410)

Name: NF6882_low_6
Description: NF6882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6882_low_6
NF6882_low_6
[»] scaffold0162 (2 HSPs)
scaffold0162 (12-410)||(9297-9704)
scaffold0162 (24-69)||(17788-17833)
[»] scaffold0132 (1 HSPs)
scaffold0132 (12-410)||(12365-12772)
[»] chr5 (20 HSPs)
chr5 (12-410)||(2030385-2030802)
chr5 (13-410)||(25003433-25003838)
chr5 (161-410)||(34938163-34938412)
chr5 (25-410)||(23985583-23985992)
chr5 (83-232)||(34937996-34938146)
chr5 (24-273)||(7527684-7527955)
chr5 (24-248)||(17908244-17908489)
chr5 (309-410)||(29191387-29191487)
chr5 (135-272)||(32949787-32949926)
chr5 (140-222)||(14343351-14343430)
chr5 (309-401)||(23112279-23112371)
chr5 (161-222)||(16836869-16836931)
chr5 (161-314)||(23235809-23235963)
chr5 (179-222)||(18225565-18225608)
chr5 (166-222)||(11764913-11764970)
chr5 (169-218)||(19872552-19872601)
chr5 (24-69)||(32949674-32949719)
chr5 (166-222)||(14343258-14343314)
chr5 (166-314)||(16836681-16836830)
chr5 (335-375)||(7527982-7528021)
[»] scaffold0016 (1 HSPs)
scaffold0016 (12-410)||(167436-167841)
[»] scaffold0686 (2 HSPs)
scaffold0686 (12-410)||(7234-7638)
scaffold0686 (12-158)||(4-158)
[»] chr3 (36 HSPs)
chr3 (12-319)||(51962520-51962834)
chr3 (13-410)||(18738342-18738763)
chr3 (161-410)||(54039787-54040036)
chr3 (79-232)||(54040053-54040207)
chr3 (79-232)||(54049340-54049494)
chr3 (161-317)||(54049166-54049323)
chr3 (26-274)||(12903201-12903471)
chr3 (135-274)||(11987510-11987650)
chr3 (340-410)||(51962407-51962477)
chr3 (135-274)||(17936911-17937051)
chr3 (309-402)||(18892814-18892906)
chr3 (309-401)||(23174534-23174625)
chr3 (175-244)||(9304100-9304169)
chr3 (309-400)||(18889587-18889677)
chr3 (135-274)||(11480423-11480563)
chr3 (161-244)||(31413690-31413774)
chr3 (336-410)||(17937078-17937152)
chr3 (179-274)||(14284019-14284115)
chr3 (321-375)||(9303674-9303729)
chr3 (168-222)||(31413802-31413856)
chr3 (161-222)||(11637123-11637184)
chr3 (175-274)||(38166767-38166867)
chr3 (360-410)||(9303924-9303974)
chr3 (161-222)||(8603309-8603370)
chr3 (169-218)||(10903068-10903117)
chr3 (338-381)||(14284144-14284187)
chr3 (175-225)||(11516929-11516978)
chr3 (336-410)||(11987410-11987483)
chr3 (24-69)||(9304297-9304342)
chr3 (24-69)||(14283873-14283918)
chr3 (24-69)||(17936810-17936855)
chr3 (24-69)||(38166614-38166659)
chr3 (24-69)||(11480632-11480677)
chr3 (24-69)||(23887739-23887784)
chr3 (90-134)||(9304221-9304265)
chr3 (24-68)||(11636980-11637024)
[»] chr6 (27 HSPs)
chr6 (12-410)||(27739568-27739973)
chr6 (24-410)||(14151045-14151438)
chr6 (161-410)||(35010517-35010766)
chr6 (90-236)||(35010779-35010926)
chr6 (79-232)||(19627871-19628025)
chr6 (24-248)||(16301460-16301701)
chr6 (309-410)||(14627253-14627353)
chr6 (321-410)||(1554886-1554976)
chr6 (161-274)||(19628042-19628156)
chr6 (309-401)||(221983-222074)
chr6 (143-248)||(29664904-29665009)
chr6 (135-248)||(32277989-32278102)
chr6 (350-410)||(16301242-16301302)
chr6 (166-222)||(940649-940705)
chr6 (166-222)||(17084665-17084721)
chr6 (166-222)||(17084843-17084899)
chr6 (161-314)||(19671187-19671341)
chr6 (166-222)||(31469033-31469089)
chr6 (158-244)||(31468921-31469008)
chr6 (173-222)||(19671110-19671159)
chr6 (161-222)||(22594895-22594956)
chr6 (173-222)||(22594984-22595033)
chr6 (24-68)||(29664782-29664826)
chr6 (168-219)||(17084757-17084808)
chr6 (167-244)||(940537-940615)
chr6 (27-68)||(26523749-26523790)
chr6 (24-68)||(19670955-19670999)
[»] chr7 (26 HSPs)
chr7 (24-410)||(47482142-47482550)
chr7 (161-402)||(7285677-7285919)
chr7 (161-381)||(14252568-14252792)
chr7 (79-232)||(14252809-14252963)
chr7 (16-232)||(7285936-7286168)
chr7 (24-256)||(48623739-48623992)
chr7 (321-410)||(15761399-15761489)
chr7 (12-119)||(25122783-25122898)
chr7 (135-274)||(13319976-13320117)
chr7 (142-274)||(3048415-3048548)
chr7 (166-222)||(39293233-39293289)
chr7 (166-222)||(44306674-44306730)
chr7 (166-222)||(44306763-44306819)
chr7 (166-213)||(12246615-12246662)
chr7 (158-314)||(9641658-9641816)
chr7 (166-222)||(14276482-14276539)
chr7 (161-222)||(28389054-28389115)
chr7 (161-244)||(18081088-18081172)
chr7 (167-222)||(39293144-39293199)
chr7 (336-410)||(13320144-13320217)
chr7 (161-314)||(14276300-14276454)
chr7 (166-222)||(3136111-3136167)
chr7 (24-69)||(3048295-3048340)
chr7 (24-69)||(13319863-13319908)
chr7 (158-222)||(44306585-44306649)
chr7 (24-68)||(9641518-9641562)
[»] scaffold0158 (2 HSPs)
scaffold0158 (161-410)||(23580-23829)
scaffold0158 (79-232)||(23409-23563)
[»] scaffold0833 (1 HSPs)
scaffold0833 (24-402)||(1719-2121)
[»] chr2 (23 HSPs)
chr2 (23-274)||(28032441-28032703)
chr2 (12-330)||(32464441-32464773)
chr2 (161-381)||(42179632-42179860)
chr2 (24-274)||(17203112-17203384)
chr2 (83-232)||(7513522-7513672)
chr2 (79-232)||(42179877-42180029)
chr2 (26-232)||(22254870-22255099)
chr2 (158-274)||(7513391-7513508)
chr2 (321-410)||(32464816-32464906)
chr2 (161-273)||(22255116-22255230)
chr2 (175-248)||(25266602-25266675)
chr2 (135-244)||(23779298-23779407)
chr2 (166-222)||(16294238-16294294)
chr2 (173-222)||(22331297-22331346)
chr2 (166-222)||(22331468-22331524)
chr2 (161-222)||(22331374-22331435)
chr2 (169-218)||(25593786-25593835)
chr2 (339-393)||(25266491-25266545)
chr2 (24-69)||(25254868-25254913)
chr2 (26-69)||(23779476-23779519)
chr2 (180-232)||(28773364-28773413)
chr2 (161-222)||(16294149-16294210)
chr2 (24-68)||(16294398-16294442)
[»] chr8 (34 HSPs)
chr8 (12-232)||(41508567-41508796)
chr8 (24-232)||(18617531-18617749)
chr8 (79-232)||(18610801-18610955)
chr8 (161-315)||(41508395-41508550)
chr8 (321-410)||(41508262-41508352)
chr8 (161-274)||(18610972-18611086)
chr8 (161-274)||(18617766-18617880)
chr8 (142-274)||(16040978-16041111)
chr8 (142-274)||(16042654-16042787)
chr8 (321-410)||(18618189-18618279)
chr8 (135-274)||(21495652-21495792)
chr8 (135-274)||(22885142-22885282)
chr8 (166-222)||(17500642-17500698)
chr8 (166-222)||(20177435-20177491)
chr8 (166-222)||(20177524-20177580)
chr8 (166-222)||(20222162-20222218)
chr8 (166-222)||(20222251-20222307)
chr8 (166-314)||(20708412-20708561)
chr8 (161-222)||(16000775-16000837)
chr8 (166-222)||(18262908-18262964)
chr8 (161-221)||(45468760-45468820)
chr8 (336-375)||(16040854-16040893)
chr8 (336-375)||(16042530-16042569)
chr8 (314-384)||(17151222-17151293)
chr8 (24-69)||(21495860-21495905)
chr8 (158-222)||(20177346-20177410)
chr8 (158-222)||(20222073-20222137)
chr8 (24-68)||(20708264-20708308)
chr8 (167-217)||(18119538-18119588)
chr8 (161-222)||(17500726-17500787)
chr8 (24-69)||(22885027-22885072)
chr8 (24-68)||(16000632-16000676)
chr8 (161-244)||(45468649-45468733)
chr8 (24-68)||(45476044-45476088)
[»] scaffold0138 (5 HSPs)
scaffold0138 (196-394)||(28072-28272)
scaffold0138 (196-394)||(40068-40268)
scaffold0138 (79-232)||(27862-28016)
scaffold0138 (79-232)||(39858-40012)
scaffold0138 (79-202)||(26847-26970)
[»] chr1 (9 HSPs)
chr1 (79-274)||(20252739-20252935)
chr1 (309-401)||(32650474-32650565)
chr1 (166-222)||(18164795-18164851)
chr1 (158-244)||(18164876-18164963)
chr1 (314-384)||(20253288-20253359)
chr1 (174-225)||(20192827-20192878)
chr1 (169-218)||(25093474-25093523)
chr1 (335-410)||(20253050-20253124)
chr1 (172-217)||(18623365-18623408)
[»] chr4 (42 HSPs)
chr4 (79-232)||(19699079-19699233)
chr4 (79-232)||(19709664-19709818)
chr4 (143-277)||(22737260-22737393)
chr4 (161-330)||(55378056-55378225)
chr4 (16-232)||(55378242-55378474)
chr4 (291-394)||(8043928-8044032)
chr4 (146-274)||(23271500-23271628)
chr4 (161-274)||(19698948-19699062)
chr4 (161-274)||(19709533-19709647)
chr4 (321-410)||(55377937-55378027)
chr4 (135-248)||(14502967-14503080)
chr4 (135-232)||(9794005-9794102)
chr4 (135-248)||(32461904-32462017)
chr4 (309-401)||(14910960-14911051)
chr4 (142-235)||(8043710-8043803)
chr4 (161-222)||(14570029-14570090)
chr4 (335-410)||(23271400-23271474)
chr4 (161-222)||(7966094-7966155)
chr4 (161-218)||(12346693-12346750)
chr4 (161-222)||(40902210-40902271)
chr4 (166-222)||(41918276-41918332)
chr4 (314-384)||(19019432-19019503)
chr4 (165-218)||(12336020-12336073)
chr4 (173-222)||(13448534-13448583)
chr4 (158-314)||(13595429-13595587)
chr4 (161-222)||(41918187-41918248)
chr4 (24-68)||(22737065-22737109)
chr4 (314-384)||(8373473-8373544)
chr4 (335-410)||(19019193-19019267)
chr4 (336-381)||(14502868-14502913)
chr4 (166-222)||(19623520-19623575)
chr4 (166-314)||(40902028-40902177)
chr4 (336-375)||(9794186-9794225)
chr4 (83-220)||(7848903-7849036)
chr4 (24-69)||(23271728-23271773)
chr4 (175-222)||(19082441-19082489)
chr4 (24-67)||(8043584-8043627)
chr4 (24-67)||(13448695-13448738)
chr4 (321-375)||(22737482-22737537)
chr4 (24-69)||(9793891-9793936)
chr4 (24-69)||(32462085-32462130)
chr4 (24-68)||(13595683-13595727)
[»] scaffold0001 (3 HSPs)
scaffold0001 (27-274)||(165794-166063)
scaffold0001 (336-382)||(165617-165663)
scaffold0001 (337-382)||(165722-165767)
[»] scaffold0335 (2 HSPs)
scaffold0335 (24-236)||(9516-9739)
scaffold0335 (161-222)||(9442-9503)
[»] scaffold0892 (1 HSPs)
scaffold0892 (84-255)||(2439-2610)
[»] scaffold0615 (1 HSPs)
scaffold0615 (135-270)||(7421-7555)
[»] scaffold0023 (2 HSPs)
scaffold0023 (136-274)||(57872-58012)
scaffold0023 (24-68)||(58082-58126)
[»] scaffold1486 (2 HSPs)
scaffold1486 (136-248)||(1616-1728)
scaffold1486 (24-68)||(1502-1546)
[»] scaffold0244 (4 HSPs)
scaffold0244 (291-394)||(24205-24309)
scaffold0244 (175-244)||(24434-24503)
scaffold0244 (309-394)||(17786-17872)
scaffold0244 (336-372)||(24294-24330)
[»] scaffold0012 (3 HSPs)
scaffold0012 (143-274)||(35177-35309)
scaffold0012 (309-401)||(223303-223394)
scaffold0012 (358-408)||(35078-35128)
[»] scaffold0017 (1 HSPs)
scaffold0017 (24-241)||(42325-42563)
[»] scaffold0125 (3 HSPs)
scaffold0125 (291-394)||(34241-34345)
scaffold0125 (24-134)||(30040-30161)
scaffold0125 (336-372)||(34220-34256)
[»] scaffold0207 (3 HSPs)
scaffold0207 (135-248)||(16615-16728)
scaffold0207 (336-381)||(16782-16827)
scaffold0207 (24-69)||(16514-16559)
[»] scaffold0342 (3 HSPs)
scaffold0342 (142-248)||(2042-2148)
scaffold0342 (336-410)||(1916-1988)
scaffold0342 (24-69)||(2222-2267)
[»] scaffold0118 (1 HSPs)
scaffold0118 (140-273)||(35591-35725)
[»] scaffold0009 (1 HSPs)
scaffold0009 (166-314)||(98386-98536)
[»] scaffold0066 (5 HSPs)
scaffold0066 (175-274)||(44784-44884)
scaffold0066 (135-274)||(52940-53080)
scaffold0066 (321-410)||(53330-53420)
scaffold0066 (24-68)||(52827-52871)
scaffold0066 (24-68)||(44631-44675)
[»] scaffold0032 (2 HSPs)
scaffold0032 (135-232)||(14832-14929)
scaffold0032 (336-375)||(14709-14748)
[»] scaffold1427 (1 HSPs)
scaffold1427 (309-401)||(1382-1473)
[»] scaffold0005 (1 HSPs)
scaffold0005 (161-222)||(247286-247347)
[»] scaffold0165 (5 HSPs)
scaffold0165 (166-222)||(20741-20797)
scaffold0165 (166-222)||(28725-28781)
scaffold0165 (161-314)||(28809-28963)
scaffold0165 (166-244)||(20830-20909)
scaffold0165 (14-68)||(28567-28621)
[»] scaffold0133 (2 HSPs)
scaffold0133 (158-222)||(3203-3267)
scaffold0133 (166-244)||(3091-3170)
[»] scaffold0124 (1 HSPs)
scaffold0124 (326-399)||(36527-36601)
[»] scaffold1666 (1 HSPs)
scaffold1666 (135-244)||(945-1054)
[»] scaffold0561 (2 HSPs)
scaffold0561 (166-314)||(4166-4316)
scaffold0561 (24-68)||(4420-4464)
[»] scaffold0173 (2 HSPs)
scaffold0173 (146-274)||(4149-4278)
scaffold0173 (23-69)||(4009-4055)
[»] scaffold0409 (2 HSPs)
scaffold0409 (166-222)||(2632-2688)
scaffold0409 (166-222)||(10887-10943)
[»] scaffold0148 (1 HSPs)
scaffold0148 (166-222)||(36517-36573)
[»] scaffold0191 (1 HSPs)
scaffold0191 (90-244)||(140-303)
[»] scaffold0700 (1 HSPs)
scaffold0700 (161-222)||(1203-1264)
[»] scaffold1068 (1 HSPs)
scaffold1068 (166-222)||(1868-1924)
[»] scaffold0020 (1 HSPs)
scaffold0020 (166-222)||(104568-104624)
[»] scaffold0503 (1 HSPs)
scaffold0503 (161-222)||(10224-10285)
[»] scaffold0361 (1 HSPs)
scaffold0361 (334-375)||(2618-2659)
[»] scaffold0029 (1 HSPs)
scaffold0029 (135-212)||(67085-67162)
[»] scaffold0329 (1 HSPs)
scaffold0329 (179-219)||(1809-1849)
[»] scaffold0258 (1 HSPs)
scaffold0258 (27-68)||(8740-8781)
[»] scaffold0090 (2 HSPs)
scaffold0090 (166-222)||(36283-36340)
scaffold0090 (166-222)||(36190-36246)


Alignment Details
Target: scaffold0162 (Bit Score: 307; Significance: 1e-173; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 12 - 410
Target Start/End: Complemental strand, 9704 - 9297
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||| ||||||||||  ||    
T  9704 acatcaactacattcacaactaggactcatgccataacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttaggccg 9605  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  9604 tcgcccctgatgccgatagaacatcataatctcaccatttggatatataaaaatatccgtctccatctatcatgtatgcatgaacatacgactcaacaac 9505  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  9504 aatgcatatgttcacacaacaattcaccatattctcaccaatattacttgcataaatggagtcacaccaattcatcatttctcgacatatatgaactcac 9405  T
Q  304 caacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  9404 caacaattcacaacatcatatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacattaa 9305  T
Q  403 ttacatga 410  Q
    || |||||    
T  9304 tttcatga 9297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 17788 - 17833
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  17788 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 17833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 12 - 410
Target Start/End: Original strand, 12365 - 12772
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||   |    
T  12365 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttagaaag 12464  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||  | ||| ||||| |||||||||||||||||||||||||||||||    
T  12465 tcgcccatgatgccgaaaaaacatcataatctcaccatttagatatataaaaataaacatctacatcagtcatgtatgcatgaacatatgactcaacaac 12564  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12565 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 12664  T
Q  304 caacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12665 caacaattcacaacatcatatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcacctgcacataatttcacatcaa 12764  T
Q  403 ttacatga 410  Q
    ||||||||    
T  12765 ttacatga 12772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 12 - 410
Target Start/End: Original strand, 2030385 - 2030802
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||        |||||||||| ||||||||||  ||    
T  2030385 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccatgtatgcatgcggtaccggtctcaccaatatttaggccg 2030484  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  2030485 tcgcccctgatgccgacagaacatcataatctcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaac 2030584  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2030585 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactaac 2030684  T
Q  304 caacaattcacaacatc----------atatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataat 392  Q
    ||||||||||||| |||          |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2030685 caacaattcacaatatcatatatatatatatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataat 2030784  T
Q  393 ttcacatcaattacatga 410  Q
    ||||||||||||||||||    
T  2030785 ttcacatcaattacatga 2030802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 410
Target Start/End: Original strand, 25003433 - 25003838
Alignment:
Q  13 catcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcg 103  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||||        |||||||||| |||||||||| | |    
T  25003433 catcaactacattcacaactaagactcattccacaacatgatatgatcctagacacaactctatatgcatgtggtaccggtctcaccaatatttaggttg 25003532  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  25003533 tcgcctgtgatgccaacagaacatcataatctcaccatttggatatataaaaatatatgtctccatcattcgtgtatgcatgaacatatgactcaacaac 25003632  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  25003633 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcatatatgcattcacaccaatttatcatttctcgacatatatgcactcac 25003732  T
Q  304 caacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    ||||||||||||||| ||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  25003733 caacaattcacaacaacata--tatattcacccaccatatcataacaaacaatgtatatggattcaccaatatcatcaccttcacgtaatttcatatcaa 25003830  T
Q  403 ttacatga 410  Q
     |||||||    
T  25003831 atacatga 25003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 161 - 410
Target Start/End: Original strand, 34938163 - 34938412
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  34938163 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcataaa 34938262  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgta 358  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||    
T  34938263 tgcattcacaccaattcgtcatttctcgacatatatgcactcaccaacaattcacaacaacata--tatattcacccaccatatcataataaacaatgta 34938360  T
Q  359 tatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  34938361 tatggattcaccaatatcatcaccttcacataatttcacatcaaatacatga 34938412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 25 - 410
Target Start/End: Complemental strand, 23985992 - 23985583
Alignment:
Q  25 tcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgatg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||        |||||||| | ||||||||||  ||||| || |||||    
T  23985992 tcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccggtctgaccaatatttaggccgtcgtccatgatg 23985893  T
Q  116 ccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaa 202  Q
    || |   |||| |||||||             ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  23985892 ccaattgaacaccataatcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaa 23985793  T
Q  203 caatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaac-tc 301  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||| ||||| || ||    
T  23985792 caatgcatatgttcacacaacaactcaccaaattctcaccattattatttgcataaatgcactcacaccaattcatcatttctctacacatatgcacatc 23985693  T
Q  302 accaacaattcacaacatcatatttatattcac-caccatatcataataaacaatgtat--atggattcaccaatattatcaccttcacataatttcaca 398  Q
    ||||||||||||||||| ||||  | ||||||| ||||||||  | ||||||||| |||  |||||||||||||||| ||||||||||||||| |||| |    
T  23985692 accaacaattcacaacaacata--tgtattcactcaccatattgttataaacaatatatgcatggattcaccaatatcatcaccttcacataacttcata 23985595  T
Q  399 tcaattacatga 410  Q
    |||| |||||||    
T  23985594 tcaaatacatga 23985583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 34937996 - 34938146
Alignment:
Q  83 gtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgc 182  Q
    |||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  34937996 gtctcaccaatatttaggtcgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgtatgc 34938095  T
Q  183 atgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34938096 atgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 34938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 24 - 273
Target Start/End: Original strand, 7527684 - 7527955
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||        |||| ||||| ||||||||||  |||||||| ||||    
T  7527684 ttcacaacaaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccgatctcaccaatatttaggccgtcgcccatgat 7527783  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||||| ||||||||||||             ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  7527784 gccgacagaacatcataatcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaata 7527883  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaa 273  Q
    | ||||||||| | ||||||||||||||||| |||||||||||||||| ||||||  ||||| |||||||||    
T  7527884 ataatgcatatatccacacaacaactcaccaaattctcaccaatattatttgcatttatgcaatcacaccaa 7527955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 24 - 248
Target Start/End: Original strand, 17908244 - 17908489
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||        |||| ||||| ||||||||||  |||||||| ||||    
T  17908244 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccgatctcaccaatatttaggccgtcgcccatgat 17908343  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||||| ||||||||||||             ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  17908344 gccgacagaacatcataatcatcaccaatatcatcaccatttggatatataaaa-tatccgtctccatcagtcatgtatgcatgaacatatgactcaaca 17908442  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatatt 248  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||    
T  17908443 acaatgcatatgttcacacaacaactcacaaaattctcaccaatatt 17908489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 410
Target Start/End: Complemental strand, 29191487 - 29191387
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattaca 407  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  29191487 attcacaacaacatat--atattcacccaccatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaataca 29191390  T
Q  408 tga 410  Q
    |||    
T  29191389 tga 29191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 32949787 - 32949926
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatc-atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccat 233  Q
    |||||| ||| |||||||||||||| ||||  || |||   ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  32949787 tcaccaattgaatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccat 32949886  T
Q  234 attctcaccaata-ttacttgcataaatgcattcacacca 272  Q
    ||  ||||||||| ||| ||||||  ||||| ||||||||    
T  32949887 atcttcaccaatatttatttgcatttatgcaatcacacca 32949926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 14343430 - 14343351
Alignment:
Q  140 atttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||||||||||||   | |||| |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  14343430 atttggatatataaaa---tccgtcaccatcagtcatgaatgcatgaacatatgactcaacaacaatgtatatgttcacacaa 14343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 23112371 - 23112279
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaa-tattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||||||| ||| ||||||||| ||| |||||||| ||||||||||||||||    
T  23112371 attcacaacaacatat--atattcacccaccatatcataataaacaatgtagatgtattcaccaattatcatcacctttacataatttcacatca 23112279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 16836931 - 16836869
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16836931 cgtcaccatcagtcatgaatgcatgaacatatgactcaacaactaatgcatatgttcacacaa 16836869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 314
Target Start/End: Complemental strand, 23235963 - 23235809
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattacttgcataa 258  Q
    |||| |||||| ||||| ||||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||| | ||||| ||| | |  | |||||     
T  23235963 cgtcaccatcagtcatgaatgcatgaacagatgactcaataacaaatgcatatgttcacacaaacaattcaccacaatctcatcaacact--tagcatat 23235866  T
Q  259 atgcattca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    | ||||||| || ||||||| |||| || |||||||||  |||||||||||||||||    
T  23235865 acgcattcaccaacaattcaccattacttgacatatatacactcaccaacaattcac 23235809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 18225608 - 18225565
Alignment:
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18225608 atgcatgaacatatggctcaacaacaatgcatatgttcacacaa 18225565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 11764970 - 11764913
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactc-aacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||    
T  11764970 ccatcagtcatgaatgcatgaacatatgtctctaacaacaatgcatatgttcacacaa 11764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 19872552 - 19872601
Alignment:
Q  169 tcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    |||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  19872552 tcaaccatgtatgcatgaaaatatgactctacaataatgcatatgttcac 19872601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 32949674 - 32949719
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  32949674 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 32949719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 14343314 - 14343258
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| |||||  ||||||||||||||| |||||    
T  14343314 ccatcagtcatgtatgcataaacatatgtctcaaatacaatgcatatgttcgcacaa 14343258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 314
Target Start/End: Complemental strand, 16836830 - 16836681
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattactt-gcataaatgca 263  Q
    |||||| ||||||||| ||  ||||||| | ||||||||||| |||||||||||||| ||| |||||  | ||||||||  |  |||| ||||| |||||    
T  16836830 ccatcagtcatgtatgtatacacatatgtcacaacaacaatgtatatgttcacacaaccaattcaccgcaatctcacca--aacacttagcatatatgca 16836733  T
Q  264 ttca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    |||| ||  |||||| | || || |||||||||| |||||||||||||||||    
T  16836732 ttcaccaataattcaccgttacttgacatatatgcactcaccaacaattcac 16836681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 7527982 - 7528021
Alignment:
Q  335 caccatatcataataaacaatgtatatggattcaccaatat 375  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  7527982 caccatatcataataa-caatgtatatggactcaccaatat 7528021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 12 - 410
Target Start/End: Complemental strand, 167841 - 167436
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||    
T  167841 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttagttcg 167742  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    || ||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||| | ||| ||||| |||||||||||||||||||||||||||||||    
T  167741 tctcccttgatgccgacagaacatcataatctcaccatttagatatttaaaaatatccatcttcatcagtcatgtatgcatgaacatatgactcaacaac 167642  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  167641 aatgcatatgttcacacaacaactcaccattttctcaccaatattgtttgcataaatgcattcatatcaattcatcatttctcgacatatatgaactc-c 167543  T
Q  304 caacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    |||||||||| ||||| || | |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  167542 caacaattcataacat-atgtatatattcacccaccttatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaa 167444  T
Q  403 ttacatga 410  Q
    ||||||||    
T  167443 ttacatga 167436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 270; Significance: 1e-151; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 12 - 410
Target Start/End: Complemental strand, 7638 - 7234
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||        |||||||||| |||||||||| |||    
T  7638 acatcaactacattcacaactaggactcatgccattacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttaggtcg 7539  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  7538 tcgcccttgatgccgacagaacatcataatctcaccatttagatatttaaaaatacccatctccatcagtcatgtatgcatgaacatatgactcaacaac 7439  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||| |    
T  7438 aatgcatatgttcacacaacaactcaccatattctcaccaatattgtttgcataaatgcattcacatcaattcatcatttctcgacatacatgaactc-c 7340  T
Q  304 caacaattcacaacatcatatttatattcaccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaat 403  Q
    |||||||||| ||||| || | ||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7339 caacaattcataacat-atgtatatattcacccacttatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaat 7241  T
Q  404 tacatga 410  Q
    |||||||    
T  7240 tacatga 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 158 - 4
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||        |||||||||| |||||||||| |||    
T  158 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccatgtatgcatgcggtaccggtctcaccaatatttaggtcg 59  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaata 158  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  58 tcgcccttgatgccgacagaacatcataatctcaccatttagatatttaaaaata 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 12 - 319
Target Start/End: Complemental strand, 51962834 - 51962520
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||  ||    
T  51962834 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttagcccg 51962735  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  51962734 tcgcccttgatgccgacagaacatcataatctcaccatttagatatataaaaatatccatctccatcagtcatgtatgcatgaacatatgactcaacaac 51962635  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactcac 303  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51962634 aatgcatatgttcacacaacaactcgccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactc-c 51962536  T
Q  304 caacaattcacaacat 319  Q
    |||||||||| |||||    
T  51962535 caacaattcataacat 51962520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 410
Target Start/End: Original strand, 18738342 - 18738763
Alignment:
Q  13 catcaactacattcacaactaggactcatgccacaa-catgatatgatcctagacac-accctatatg--------accggtc-tcaacaatatttagtt 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||        || | || ||| ||||||||||      
T  18738342 catcaaccacattcacaactaggactcatgccacaatcatgttatgatcctagacacgacactatatgcatgcggtactgatcatcaccaatatttaggc 18738441  T
Q  102 cgtcgcccctgatgccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaac 188  Q
    |||||||| ||||||||||| ||||||||||||             ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  18738442 cgtcgcccatgatgccgacagaacatcataatcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaac 18738541  T
Q  189 atatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcga 288  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18738542 atatgactcaataacaatgcatatgttcatacaacaactcaccatatcatcaccactattacttgcataaatgcattcacaccaattcatcatttctcga 18738641  T
Q  289 catatatgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcac 387  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| ||||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||    
T  18738642 catatatgcactcaccaacaactcacaacatcatatatatattcacccaccatattataat-aacaaagtatatggattcaccaatatcatcacctccac 18738740  T
Q  388 ataatttcacatcaattacatga 410  Q
    |||||||||||||||||||||||    
T  18738741 ataatttcacatcaattacatga 18738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 161 - 410
Target Start/End: Complemental strand, 54040036 - 54039787
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  54040036 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcataaa 54039937  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatattcac-caccatatcataataaacaatgta 358  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||  ||||||||| |||| |||||||||||||||||||    
T  54039936 tgcattcacaccaattcgtcatttctcgacatatatgcactcaccaacaattcacaacgacata--tatattcacacaccctatcataataaacaatgta 54039839  T
Q  359 tatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||| |||||||    
T  54039838 tatggattcaccaatatcatcaccttcatatagtttcacatcaaatacatga 54039787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 54040207 - 54040053
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  54040207 accggtctcaccaatatttaggccgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatctgtctccatcagtcatgt 54040108  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54040107 atgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54040053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 54049494 - 54049340
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  54049494 accggtctcaccaatatttaggccgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatctgtctccatcagtcatgt 54049395  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54049394 atgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54049340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 54049323 - 54049166
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  54049323 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcataaa 54049224  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaac 317  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  54049223 tgcattcacaccaattcgtcatttctcgacatatatgcactcaccaacaattcacaac 54049166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 12903471 - 12903201
Alignment:
Q  26 cacaactaggactcatgccacaacatgatatgatcctagacacacc--ctatatg--------accggtctcaacaatatttagttcgtcgcccctgatg 115  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| |  |||||||        |||| ||||| ||||||||||  | |||||| |||||    
T  12903471 cacaactaggtctcatgccacctcatgatatgatcctagacacaacacctatatgcatgcggtaccgatctcaccaatatttaggccatcgcccatgatg 12903372  T
Q  116 ccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaa 202  Q
    |||||| ||||||||||||             |||||| |||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||    
T  12903371 ccgacagaacatcataatcatcaccaaagtcatcaccacttggatatataaaa-tatctgtctccatcagtcatgtatgcatgaacatatgactcaacaa 12903273  T
Q  203 caatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaat 274  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||| ||||||||||    
T  12903272 caatgcatatgttcacacaacaactcaccaaattctcaccaatattatttgcattcatgcaatcacaccaat 12903201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 11987650 - 11987510
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| |||||||||||||||||||||||  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  11987650 tcaccaattggatatataaaaatattcgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 11987551  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  |||||| || ||| ||||||  ||||| ||||||||||    
T  11987550 tcatcaccattatttatttgcatttatgcaatcacaccaat 11987510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 51962477 - 51962407
Alignment:
Q  340 tatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51962477 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatga 51962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 17936911 - 17937051
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| || |  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  17936911 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 17937010  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  ||||||||| ||| ||||||  ||||| ||||||||||    
T  17937011 tcatcaccaatatttatttgcatttatgcaatcacaccaat 17937051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 402
Target Start/End: Original strand, 18892814 - 18892906
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  18892814 attcacaacaacatat--atattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcacctttacataattacacatcaa 18892906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 23174534 - 23174625
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  23174534 attcacaacaacatat--atattcacccaccatatcataataaacaaagtatatggattcaccaatatcatcacctttacataatttcacatca 23174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 9304169 - 9304100
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaa 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  9304169 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaacaactcaccatatcatcaccaa 9304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 18889587 - 18889677
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatc 400  Q
    |||||||||| |||||  ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  18889587 attcacaacaacatat--atattcacccaccgtatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatc 18889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 11480563 - 11480423
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| ||||  |||  || |||  ||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |    
T  11480563 tcaccaattggatatataaacatatctgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaa 11480464  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  ||||||||| ||| ||||||  ||||| ||||||||||    
T  11480463 tcatcaccaatatttatttgcatttatgcaatcacaccaat 11480423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 31413774 - 31413690
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    |||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||| | |||||||||    
T  31413774 cgtcaccatcagtcatgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaaacaattcaccacaatctcaccaa 31413690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 17937078 - 17937152
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||| |||||||    
T  17937078 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatataatttcacatcaaatacatga 17937152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 14284019 - 14284115
Alignment:
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    ||||||||||||||||||||| || |||||||||||  |||||| ||||||||||||  ||||||||| ||| ||||||  ||||| ||||||||||    
T  14284019 atgcatgaacatatgactcaataataatgcatatgtcgacacaagaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaat 14284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 9303729 - 9303674
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatat 375  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9303729 atatatatattcacccaccatatcataataaacaatgtatatggattcaccaatat 9303674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 31413856 - 31413802
Alignment:
Q  168 atcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  31413856 atcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 31413802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 11637123 - 11637184
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  11637123 cgtcaccatcagtcatgaatgcatgaacatatgactcgacaacaatccatatgttcacacaa 11637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 38166767 - 38166867
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaata-ttacttgcataaatgcattcacaccaa 273  Q
    ||||||| |||||||||| |||||| || ||| ||||||| ||||||||||||||||| ||  ||||||||| ||| ||||||  ||||| |||||||||    
T  38166767 atgtatgtatgaacatataactcaataataatacatatgtccacacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaa 38166866  T
Q  274 t 274  Q
    |    
T  38166867 t 38166867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 9303974 - 9303924
Alignment:
Q  360 atggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  9303974 atggattcaccaatatcatcaccttctcataatttcatatcaattacatga 9303924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 8603309 - 8603370
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  8603309 cgtcaccatcagtcatgaatgcataaacatatgtctcaacaataatgcatatgttcacacaa 8603370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 10903068 - 10903117
Alignment:
Q  169 tcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  10903068 tcaaccatgtatgcatgaacatatgactcgacaataatgcatatgttcac 10903117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 14284144 - 14284187
Alignment:
Q  338 catatcataataaacaatgtatatggattcaccaatattatcac 381  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  14284144 catatcataataaacaatgtatatggactcaccaatatcatcac 14284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 11516978 - 11516929
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaa 225  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||    
T  11516978 atgtatgcatgaacatatgactcggca-caatgcatatgttcacacaacaa 11516929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 11987483 - 11987410
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||| | ||||||||| |||| ||||| |||||||    
T  11987483 accatattataataaacaatgtatatgaactcaccaatatcatctcattcacataa-ttcatatcaaatacatga 11987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 9304342 - 9304297
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  9304342 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 9304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 14283873 - 14283918
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  14283873 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 14283918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 17936810 - 17936855
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  17936810 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 17936855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 38166614 - 38166659
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  38166614 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 38166659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 11480677 - 11480632
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||    
T  11480677 ttcacaactaggactcatgtcaccttatgatatgatcctagacaca 11480632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 23887784 - 23887739
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||| ||||||||    
T  23887784 ttcacaactaggactcatgtcacctcatgatatgatcatagacaca 23887739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 9304265 - 9304221
Alignment:
Q  90 caatatttagttcgtcgcccctgatgccgacataacatcataatc 134  Q
    ||||||||||  |||||||| ||||||||||| ||||||||||||    
T  9304265 caatatttaggccgtcgcccatgatgccgacagaacatcataatc 9304221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 11636980 - 11637024
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||||    
T  11636980 ttcacaattaggactcatgccacaatatgatatgcccctagacac 11637024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 12 - 410
Target Start/End: Original strand, 27739568 - 27739973
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaa-catgatatgatcctagacac-accctatatg--------accggtc-tcaacaatatttagt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |        | ||||| ||| ||||||||||     
T  27739568 acatcaactacattcacaactaggactcatgccacaatcatgatatgatcctagacacgacactataggcatgcgatatcggtcatcaccaatatttagg 27739667  T
Q  101 tcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaa--tattcgtctccatcaatcatgtatgcatgaacatatgactca 198  Q
     |||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||  ||| |||||||| || ||||||||||||||||||||||||||    
T  27739668 ccgtcgcccatgatgccaacagaacatcataatctcaccatttagatatataaaaaaatatccgtctccaccagtcatgtatgcatgaacatatgactca 27739767  T
Q  199 acaacaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaa 298  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  27739768 ataacaatgcatatgttcacacaacaactcaccatatcctcaccaatattacttgcatatatgcattcacaccaattcatcatttctcgacatatatgca 27739867  T
Q  299 ctcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcac 397  Q
         ||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27739868 -----caacaattcacaacatcata--tatattcacccaccatattataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcac 27739960  T
Q  398 atcaattacatga 410  Q
    ||||| |||||||    
T  27739961 atcaaatacatga 27739973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 24 - 410
Target Start/End: Original strand, 14151045 - 14151438
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac-ac-cctatatg--------accggtctcaacaatatttagttcgtcgcccctga 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||        |||||||||| |||||||||| ||||||||| |||    
T  14151045 ttcacaactagcactcatgccacaacatgatatgatcctagacacgacacctatatgcatgcggtaccggtctcaccaatatttaggtcgtcgcccatga 14151144  T
Q  114 tgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatg 213  Q
    |||||||| ||||||| |||| ||||||||||||||| |||    | ||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  14151145 tgccgacaaaacatcaaaatcccaccatttggatataaaaa----tccgtctccactagtcatgtatgcatgaacatatgactcaacaacaatgcatatg 14151240  T
Q  214 ttcacac-aacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatca-tttctcgacatatatgaactcaccaacaatt 311  Q
    ||||||| |||||||||||||||||||||||| ||||||||  || |||||||||||||||||||| | ||||||||||| |||| || |||||||||||    
T  14151241 ttcacacaaacaactcaccatattctcaccaaaattacttgtgtatatgcattcacaccaattcattattttctcgacatgtatgcacccaccaacaatt 14151340  T
Q  312 cacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    | ||||| ||||  |||||||||| | |||||||| ||||||||||||| | ||||||||||||| |||| |||||||||||| |||||||| |||||||    
T  14151341 ctcaacaacata--tatattcaccaatcatatcatcataaacaatgtatgtagattcaccaatatcatcatcttcacataattccacatcaaatacatga 14151438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 161 - 410
Target Start/End: Complemental strand, 35010766 - 35010517
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  35010766 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcataaa 35010667  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatattcac-caccatatcataataaacaatgta 358  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | || ||||||||| ||||||||||||||||||||||||    
T  35010666 tgcattcacaccaattcatcatttctcgacatatatgtactcaccaacaattcacaaca--agatatatattcactcaccatatcataataaacaatgta 35010569  T
Q  359 tatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  35010568 tatggattcaccaatatcattaccttcacataatttcacatcaaatacatga 35010517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 35010926 - 35010779
Alignment:
Q  90 caatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaaca 189  Q
    ||||||||||  |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  35010926 caatatttaggccgtcgcccatgatgtcgacagaacatcataatctcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaaca 35010827  T
Q  190 tatgactcaacaacaatgcatatgttcacac-aacaactcaccatatt 236  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35010826 tatgactcaacaacaatgcatatgttcacacaaacaactcaccatatt 35010779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 19627871 - 19628025
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |    
T  19627871 accggtctcaccaatatttaggccgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatat 19627970  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  19627971 atgcatgaacatatgacttaacaacaatacatatgttcacacaaacaactcacca 19628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 16301701 - 16301460
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatgac--cggt-----ctcaacaatatttagttcgtcgcccctgatg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||    ||||     |||| ||||||||||  |||||||| |||||    
T  16301701 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtactatctcaccaatatttaggccgtcgcccatgatg 16301602  T
Q  116 ccgacataacatcataatctcacca------------tttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||| ||||||||||| ||||||            ||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||    
T  16301601 ccgacagaacatcataatatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaatatatgactcaacaac 16301502  T
Q  204 aatgcatatgttcacacaacaactcaccatattctcaccaatatt 248  Q
       ||||||||||||| |||||||||||| |||||||| ||||||    
T  16301501 ---gcatatgttcacataacaactcaccaaattctcacaaatatt 16301460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 410
Target Start/End: Complemental strand, 14627353 - 14627253
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattaca 407  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  14627353 attcacaacaacatat--atattcacccaccatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaataca 14627256  T
Q  408 tga 410  Q
    |||    
T  14627255 tga 14627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 1554886 - 1554976
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  1554886 atatatatattcacccaccatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatga 1554976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 19628042 - 19628156
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||  |    
T  19628042 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcattta 19628141  T
Q  260 tgcattcacaccaat 274  Q
    |||| ||||||||||    
T  19628142 tgcaatcacaccaat 19628156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 221983 - 222074
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  221983 attcacaacaacatat--atattcacccaccatatcataataaacaatgtatatggattcaccaacatcatcacctttacataatttcacatca 222074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 29664904 - 29665009
Alignment:
Q  143 tggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcacc 242  Q
    |||||| |||||||||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||  |||||    
T  29664904 tggatacataaaaatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactctccatatcatcacc 29665003  T
Q  243 aatatt 248  Q
    ||||||    
T  29665004 aatatt 29665009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 32278102 - 32277989
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |    
T  32278102 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaaccactcaccaaa 32278003  T
Q  235 ttctcaccaatatt 248  Q
    |  |||||||||||    
T  32278002 tcatcaccaatatt 32277989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 16301302 - 16301242
Alignment:
Q  350 aacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  16301302 aacaatgtatatagactcaccaatatcatcaccttcacataatttcacatcaattacatga 16301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 940705 - 940649
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  940705 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 940649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 17084721 - 17084665
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  17084721 ccatcagtcatgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 17084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 17084899 - 17084843
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  17084899 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 17084843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 314
Target Start/End: Original strand, 19671187 - 19671341
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gcataa 258  Q
    |||| |||||| ||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | ||||||||  |  |||| |||||     
T  19671187 cgtcaccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcacca--aacacttagcatat 19671284  T
Q  259 atgcattca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||||||||| || |||||||||||  |  | |||||||| |||||||||||||||||    
T  19671285 atgcattcaccaacaattcatcatcacatgtcatatatgcactcaccaacaattcac 19671341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 31469089 - 31469033
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  31469089 ccatcaatcatgaatgcatgaacatatgactcgacaacaatgtctatgttcacacaa 31469033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 31469008 - 31468921
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    ||||||| |||||| ||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  31469008 attcgtcaccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 31468921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 19671110 - 19671159
Alignment:
Q  173 tcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  19671110 tcatgaatgcatgaacatataactcgacaacaatgcatatgttcacacaa 19671159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 22594956 - 22594895
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||||||||||| ||||| || |||||||||| |||||||||||||||||    
T  22594956 cgtcaccatcagtcatgtatgcataaacatttgtctcaacaacattgcatatgttcacacaa 22594895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 22595033 - 22594984
Alignment:
Q  173 tcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  22595033 tcatgaatgcatgaacatatgactcgacaacaatgcatatgtttacacaa 22594984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 29664782 - 29664826
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  29664782 ttcacaactaggactcatgtcacctcatgatatgatcctagacac 29664826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 17084808 - 17084757
Alignment:
Q  168 atcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcaca 219  Q
    |||| |||||||||||| |||||||  |||||||||||| ||||||||||||    
T  17084808 atcattcatgtatgcataaacatatatctcaacaacaatacatatgttcaca 17084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 940615 - 940537
Alignment:
Q  167 catcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    ||||| ||||||||| || |||||||  |||| ||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  940615 catcagtcatgtatgtataaacatatatctcatcaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 940537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 26523790 - 26523749
Alignment:
Q  27 acaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    |||||||||||||||||||||||||  |||| ||||||||||    
T  26523790 acaactaggactcatgccacaacatactatgttcctagacac 26523749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 19670955 - 19670999
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||||    
T  19670955 ttcacaattaggactcatgccacaatatgatatgtccctagacac 19670999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 1e-97; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 24 - 410
Target Start/End: Complemental strand, 47482550 - 47482142
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||         |||| ||||| |||||||||| | ||||||| ||||    
T  47482550 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatacatgcggtaccgatctcaccaatatttaggttgtcgcccatgat 47482451  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||| | ||||||||||||             |||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |    
T  47482450 gccgatagaacatcataatcatcaccaaaatcatcacaatttggatatataaaa-tatccgtctccatcagtcatgtatgcatgaacatatgactcaata 47482352  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactc 301  Q
    | ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||  ||||| ||||||||||   ||||||| |||| |||||| ||||    
T  47482351 ataatgcatatgtccacacaacaactcaccaaattctcaccaatattatttgcatttatgcaatcacaccaataattcatttcgcgacttatatgcactc 47482252  T
Q  302 accaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatc 400  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||    
T  47482251 accaacaattcacaacaacatatatatattcacccaccatatcataataaacaatatatatggattcaccaatatcatcacattcatataatttcacatc 47482152  T
Q  401 aattacatga 410  Q
    || |||||||    
T  47482151 aaatacatga 47482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 161 - 402
Target Start/End: Complemental strand, 7285919 - 7285677
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaat 260  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| || |   || | |||||||||||||||||||||||||    
T  7285919 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaaaaattcacacaatctcaccaatattacttgcataaat 7285820  T
Q  261 gcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtat 359  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  7285819 gcatccacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatatatattcacccaccatatcataataaacaatgtat 7285720  T
Q  360 atggattcaccaatattatcaccttcacataatttcacatcaa 402  Q
    ||| || ||||||||| ||||||||||||||||||||||||||    
T  7285719 atgaatccaccaatatcatcaccttcacataatttcacatcaa 7285677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 161 - 381
Target Start/End: Complemental strand, 14252792 - 14252568
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| | ||||||  || |||||||  ||||||||| || |||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  14252792 cgtcaccatcagttatgtataaataaacatatatctcaacaacgatacatatgttcatacaaacaactcaccatattctcatcaatattacttgcataaa 14252693  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatc--atatttatattca-ccaccatatcataataaacaatg 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||    
T  14252692 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatatatatattcacccaccatatcataataaacaatg 14252593  T
Q  357 tatatggattcaccaatattatcac 381  Q
    |||||||||||| |||||| |||||    
T  14252592 tatatggattcatcaatatcatcac 14252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 14252963 - 14252809
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  14252963 accggtctcaccaatatttaggtcgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 14252864  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14252863 atgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 14252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 7286168 - 7285936
Alignment:
Q  16 caactacattcacaactaggactcatgccacaa-catgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtc 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||        | ||||| || ||||||| ||  ||||    
T  7286168 caaccacattcacaactaggactcatgccacaatcatgatatgatcctagacacaactctatatgcatgcggtatcggtcacaccaatatt-aggccgtc 7286070  T
Q  106 gcccctgatgccgacataacatcataatctcaccat--------ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactc 197  Q
    |||| ||||||||| | |||||||||||| ||||||        ||||||||||||||||||  ||| |||||| |||||||||||||||||||||| ||    
T  7286069 gccc-tgatgccgatagaacatcataatcacaccatcacaccatttggatatataaaaatatctgtcgccatcagtcatgtatgcatgaacatatgaatc 7285971  T
Q  198 aacaacaatgcatatgttcacacaacaactcacca 232  Q
    ||||| |||||||||||||||||||||||||||||    
T  7285970 aacaataatgcatatgttcacacaacaactcacca 7285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 256
Target Start/End: Complemental strand, 48623992 - 48623739
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| | | |||||||        |||  |||||  |||| ||||  |||||||| ||||    
T  48623992 ttcacaactaggactcatgccacaacatgatatgatcctagacatatctctatatgcatgcggtaccattctcactaataattaggccgtcgcccatgat 48623893  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||| | ||||||||||||             ||||||||| ||||| ||||| ||| | ||||||||| ||||||||||||||||||||||||||| |    
T  48623892 gccgatagaacatcataatcatcaccaaaatcatcaccatttagatatgtaaaa-tatccatctccatcagtcatgtatgcatgaacatatgactcaata 48623794  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcat 256  Q
    | ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  48623793 ataatgcatatgtccacacaacaactcaccaaattctcaccaatattatttgcat 48623739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 15761489 - 15761399
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  15761489 atatatatattcacccaccatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatga 15761399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 25122783 - 25122898
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatg--------accggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||  ||    
T  25122783 acatcaactacattcacaactacgactcatgccacaacatgatatgatcctagacacaccctatatgcatgcggtaccggtctcaccaatatttaggccg 25122882  T
Q  104 tcgcccctgatgccga 119  Q
    |||||| |||||||||    
T  25122883 tcgcccttgatgccga 25122898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 13319976 - 13320117
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatc-atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccat 233  Q
    |||||| |||||||||||||||||| ||||  || |||   ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  13319976 tcaccaattggatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccat 13320075  T
Q  234 attctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    ||  ||||||||| ||| ||||||  ||||| ||||||||||    
T  13320076 atcatcaccaatatttatttgcatttatgcaatcacaccaat 13320117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 3048415 - 3048548
Alignment:
Q  142 ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcac 241  Q
    ||||||||||||| |||| ||||  || |||  ||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||  ||||    
T  3048415 ttggatatataaacatatccgtcatcaccaaatatgtatgtatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaatcatcac 3048514  T
Q  242 caata-ttacttgcataaatgcattcacaccaat 274  Q
    ||||| ||| ||||||  ||||| ||||||||||    
T  3048515 caatatttatttgcatttatgcaatcacaccaat 3048548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 39293289 - 39293233
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  39293289 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 39293233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 44306730 - 44306674
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  44306730 ccatcagtcatgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 44306674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 44306819 - 44306763
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  44306819 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 44306763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 12246615 - 12246662
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatg 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12246615 ccatcattcatgtatgcatgaacatatgactcaacaacaatgcatatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 9641658 - 9641816
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gc 254  Q
    |||||||  ||||| ||||| |||| |||||||||||||||||||| |||||||||||| |||| ||||| |||||| | ||||||||  |  ||||  |    
T  9641658 attcgtcatcatcagtcatgaatgcttgaacatatgactcaacaacaaatgcatatgtttacacaaacaattcaccacaatctcacca--aacacttaac 9641755  T
Q  255 ataaatgcattcac-accaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||| |||||||||| | ||||||| | || || |||||||||| |||||||||||||||||    
T  9641756 atatatgcattcacaaacaattcaccgttacttgacatatatgcactcaccaacaattcac 9641816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 14276539 - 14276482
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  14276539 ccatcagtcatgaatgcatgaacatatgactcaacaacaaatgcatatgttcacacaa 14276482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 28389054 - 28389115
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  28389054 cgtcaccatcagtcatgaatgcatgaacatatgactcgacaacaatccatatgttcacacaa 28389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 18081172 - 18081088
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacacaacaactcaccatattctcaccaa 244  Q
    |||| |||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||  | |||||| | |||||||||    
T  18081172 cgtcaccatcagtcatgaatccatgaacatatgactcaacaacaaatgcatatgttcacacaaacattcaccacaatctcaccaa 18081088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 39293199 - 39293144
Alignment:
Q  167 catcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  39293199 catcagtcgtgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 39293144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 13320144 - 13320217
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||| | ||||||||| |||| ||||| |||||||    
T  13320144 accatatcatagtaaacaatgtatatggactcaccaatatcatctcattcacataa-ttcatatcaaatacatga 13320217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 314
Target Start/End: Complemental strand, 14276454 - 14276300
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttca-cacaacaactcaccatattctcaccaatattactt-gcataa 258  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |  ||||| |||||| | ||||||||  |  |||| |||||     
T  14276454 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatccaaacaattcaccacaatctcacca--aacacttagcatat 14276357  T
Q  259 atgcattca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||||||||| || ||||||| |  | || |||||||||||| |||||||||||||||    
T  14276356 atgcattcaccaacaattcaccgctacttgacatatatgaattcaccaacaattcac 14276300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 3136111 - 3136167
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||  || ||||||||||||||||||||||||||||||||| ||||||    
T  3136111 ccatcagtcatgattgtatgaacatatgactcaacaacaatgcatatgttgacacaa 3136167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 3048295 - 3048340
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  3048295 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 3048340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 13319863 - 13319908
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  13319863 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 13319908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 44306649 - 44306585
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||| |||||| |||||||||||  ||| |||| |||| |||||| ||||||||||||||||    
T  44306649 attcgtcaccatcagtcatgtatgcacaaacttatgtctcagcaacaacgcatatgttcacacaa 44306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 9641518 - 9641562
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||    
T  9641518 ttcacaattaggactcatgccacaacatggtatgtccctagacac 9641562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 173; Significance: 7e-93; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 161 - 410
Target Start/End: Original strand, 23580 - 23829
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  23580 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcataaa 23679  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgta 358  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||  |||||||| |||||||||||||||||||||||||    
T  23680 tgcattcacaccaattcgtcatttctcgacatatatgcactcaccaataattcacaacaacata--tatattcacccaccatatcataataaacaatgta 23777  T
Q  359 tatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23778 tatggattcaccaatatcatcaccttcacataatttcacatcaattacatga 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 23409 - 23563
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    ||||||||||  |||||||||  |||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||    
T  23409 accggtctcacaaatatttaggccgtcgcccatgatgccgacagaacatcataatctcaatatttggatatataaaaatatccgtctccatcagtcatgt 23508  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23509 atgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 24 - 402
Target Start/End: Original strand, 1719 - 2121
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| | | |||||||        |||| ||||| ||||||||||    |||||| ||||    
T  1719 ttcacaactaggactcatgccacaacatgatatgatcctagacataactctatatgcatgcggtaccgatctcaccaatatttaggctttcgcccatgat 1818  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||| | ||||||||||||             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |    
T  1819 gccgatagaacatcataatcatcaccaatatcatcaccatttggatatataaaa-tattcgtctccatcagtcatgtatgcatgaacatatgactcaata 1917  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatatatgaactc 301  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||| ||||||||||   |||||||||||| |||||| |||     
T  1918 ataatgcatatgttcacacaacaactcaccaaattctcaccaatattatttgcatttatgcaatcacaccaataattcatttctcgacttatatgcactg 2017  T
Q  302 accaacaattcacaacatc--atatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcaca 398  Q
    ||||||||||||||||| |  |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||     
T  2018 accaacaattcacaacaacatatatatatattcacccaccatatcataataaacaatatatatggattcaccaatatcatcaccttcatataatttcacg 2117  T
Q  399 tcaa 402  Q
    ||||    
T  2118 tcaa 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 28032703 - 28032441
Alignment:
Q  23 attcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||        |||| ||||| ||||||||||  |||||||| |||    
T  28032703 attcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccgatctcaccaatatttaggccgtcgcccatga 28032604  T
Q  114 tgccgacataacatcataatc-tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatat 212  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28032603 tgccgacaaaacatcataatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatat 28032504  T
Q  213 gttcacacaacaactcaccatattctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||||  ||||||||||||||||    
T  28032503 gttcacacaacaactcaccatatcatcaccaatatttatttgcatttatgcattcacaccaat 28032441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 12 - 330
Target Start/End: Original strand, 32464441 - 32464773
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttc 102  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||        ||| ||| || |||||||  |||     
T  32464441 acatcaaatacattcacaactaggactcatgtcacaacatgatatgatcctagacacaactctatatgcatgtggtaccagtcacaccaatattaggtt- 32464539  T
Q  103 gtcgcccctgatgccgacataacatcataatctcaccat--------ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatga 194  Q
    ||||||| ||||||||||| |||||||||||| ||||||        |||||||||||||| |||  ||| |||||| ||||||||||||||||||||||    
T  32464540 gtcgccc-tgatgccgacagaacatcataatcacaccatcacaccatttggatatataaaa-tatctgtcaccatcagtcatgtatgcatgaacatatga 32464637  T
Q  195 ctcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatata 294  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  32464638 ctcaacaacaatgcatatgttcacacaacaactcaccaaattcacaccaatattacttgcataaatgcatgcacaccaattcgtcatttctcgacatata 32464737  T
Q  295 tgaactcaccaacaattcacaacatcatatttatat 330  Q
    ||| || ||| |||||||||||||||| || |||||    
T  32464738 tgatcttaccgacaattcacaacatcacatatatat 32464773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 161 - 381
Target Start/End: Complemental strand, 42179860 - 42179632
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| ||||||||||  ||| ||||||||||||||||||| |||||||||||||||||    
T  42179860 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatccaaacaactcaccatattctcactaatattacttgcataaa 42179761  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatc------atatttatattca-ccaccatatcataataaac 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||| |||||||| |||||||||||||||||||    
T  42179760 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatatatatatatattcacccaccatatcataataaac 42179661  T
Q  353 aatgtatatggattcaccaatattatcac 381  Q
    |||||||||||||||| || ||| |||||    
T  42179660 aatgtatatggattcatcattatcatcac 42179632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 24 - 274
Target Start/End: Original strand, 17203112 - 17203384
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||        |||| ||||| ||||||| || ||||||||| ||||    
T  17203112 ttcacaactaggactcatgccacaacatgatatgatcctaaacacaactctatatgcatgcggtaccgatctcaccaatattcaggtcgtcgcccatgat 17203211  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||||| ||||||||||||             ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  17203212 gccgacagaacatcataatcatcaccaatatcatcaccatttagatatataaaaatatccgtctccatcactcatgtatgcatgaacatatgactcaaca 17203311  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaat 274  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||  ||||| ||||||||||    
T  17203312 acaatgcatatgttcacacaacaattcaccaaattctcaccaatattatttgcatttatgcaatcacaccaat 17203384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 7513672 - 7513522
Alignment:
Q  83 gtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgc 182  Q
    |||||| ||||||||||   ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  7513672 gtctcaccaatatttaggctgtcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatttgtctccatcagtcatgtatgc 7513573  T
Q  183 atgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  7513572 atgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 7513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 42180029 - 42179877
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||| ||||||    
T  42180029 accggtctcaccaatatttaggtcgtcacccatgatgccgacagaacatcataatctcaccatttggatata--aaaatatctgtctccatcagtcatgt 42179932  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42179931 atgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 42179877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 22254870 - 22255099
Alignment:
Q  26 cacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgatgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||        |||| ||||| ||||||||||  |||||||| ||||||    
T  22254870 cacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccgatctcaccaatatttaggccgtcgcccatgatgc 22254969  T
Q  117 cgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    ||||| ||||||||||||             |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  22254970 cgacagaacatcataatcatcactaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaac 22255069  T
Q  204 aatgcatatgttcacac-aacaactcacca 232  Q
    ||| ||||||||||||| ||||||||||||    
T  22255070 aattcatatgttcacacaaacaactcacca 22255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 7513508 - 7513391
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaatattacttgcat 256  Q
    ||||||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| || ||||| | ||||||||||||||||||||||||||||    
T  7513508 attcgtcaccatcagtcatgtatgcataaacatatttctcaacaacaatacatatgttcatacaaacaatttaccatattctcaccaatattacttgcat 7513409  T
Q  257 aaatgcattcacaccaat 274  Q
      ||||| ||||||||||    
T  7513408 ttatgcaatcacaccaat 7513391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 32464816 - 32464906
Alignment:
Q  321 atatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  32464816 atatatatattcatccaccatatcataataaacaacatatatggattcaccaatatcatcaatttcacataatttcacatcaattacatga 32464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 22255116 - 22255230
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa-tattacttgcataa 258  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||||||||||| ||||||||||||      
T  22255116 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaattattacttgcattt 22255215  T
Q  259 atgcattcacaccaa 273  Q
    ||||| |||||||||    
T  22255216 atgcaatcacaccaa 22255230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 25266675 - 25266602
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 248  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  25266675 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 25266602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 23779407 - 23779298
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| |  ||||||||||| ||||||| |||||| ||||    
T  23779407 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaaaaactcatcata 23779308  T
Q  235 ttctcaccaa 244  Q
    |  |||||||    
T  23779307 tcatcaccaa 23779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 16294294 - 16294238
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16294294 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 16294238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 22331297 - 22331346
Alignment:
Q  173 tcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  22331297 tcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 22331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 22331468 - 22331524
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  22331468 ccatcagtcatgtatgcataaacatatggctcaacaacaatgcatatgtttacacaa 22331524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 22331374 - 22331435
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||||||||||| |||||||  ||||||||||||| ||||||||||||||    
T  22331374 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatgtatatgttcacacaa 22331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 25593786 - 25593835
Alignment:
Q  169 tcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  25593786 tcaaccatgtatgcatgaacatatgactcgacaataatgcatatgttcac 25593835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 25266545 - 25266491
Alignment:
Q  339 atatcataataaacaatgtatatggattcaccaatattatcaccttcacataatt 393  Q
    |||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||    
T  25266545 atatcatagtaaacaatgtatatggactcaccaatatcatctcattcacataatt 25266491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 25254913 - 25254868
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  25254913 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 25254868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 23779519 - 23779476
Alignment:
Q  26 cacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||| |||  |||||||||||||||||||||    
T  23779519 cacaactaggactcatgtcacctcatgatatgatcctagacaca 23779476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 28773364 - 28773413
Alignment:
Q  180 tgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 232  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||| ||||||    
T  28773364 tgcatgaacatatgac---acaacaatgcatatgttcatacaacaaatcacca 28773413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 16294210 - 16294149
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||||||| || |||||||  |||||||| ||| |||||||||||||||    
T  16294210 cgtcaccatcagtcatgtatgtataaacatatatctcaacaataatacatatgttcacacaa 16294149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 16294442 - 16294398
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||||    
T  16294442 ttcacaattaggactcatgccacaatatgatatgcccctagacac 16294398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 6e-81; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 41508796 - 41508567
Alignment:
Q  12 acatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacacaccctatatga--------ccggtctcaacaatatttagttcg 103  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||| ||||||||||  ||    
T  41508796 acatcaactacattcacaactaggactcatgccaaaacatgatatgatcctagacacaccctatatgcatgcgttgccggtctcaccaatatttaggccg 41508697  T
Q  104 tcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaac 203  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  41508696 tcgcccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaac 41508597  T
Q  204 aatgcatatgttcacac-aacaactcacca 232  Q
    ||||||||||||||||| ||||||||||||    
T  41508596 aatgcatatgttcacacaaacaactcacca 41508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 18617531 - 18617749
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||        |||| ||||| |||||||||| ||||||||| ||||    
T  18617531 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctaaatgcatgcggtaccgatctcaccaatatttaggtcgtcgcccatgat 18617630  T
Q  115 gccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgt 214  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  18617631 gccggcagaacatcataatctcaccatttggatatataaaaatattcgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatatatatgt 18617730  T
Q  215 tcacac-aacaactcacca 232  Q
    |||||| ||||||||||||    
T  18617731 tcacacaaacaactcacca 18617749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 18610801 - 18610955
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18610801 accggtctcaccaatatttaggccgtcgcccatgatgccgacataacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 18610900  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18610901 atgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 18610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 161 - 315
Target Start/End: Complemental strand, 41508550 - 41508395
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||| ||||||||    
T  41508550 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacctgcataaa 41508451  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcaca 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41508450 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcaca 41508395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 41508352 - 41508262
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  41508352 atatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattgcatga 41508262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 18610972 - 18611086
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||  |    
T  18610972 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcattta 18611071  T
Q  260 tgcattcacaccaat 274  Q
    |||| ||||||||||    
T  18611072 tgcaatcacaccaat 18611086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 18617766 - 18617880
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||  |    
T  18617766 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcattta 18617865  T
Q  260 tgcattcacaccaat 274  Q
    |||| ||||||||||    
T  18617866 tgcaatcacaccaat 18617880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 16041111 - 16040978
Alignment:
Q  142 ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcac 241  Q
    ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||    
T  16041111 ttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcac 16041012  T
Q  242 caata-ttacttgcataaatgcattcacaccaat 274  Q
    ||||| ||| ||||||  ||||| ||||||||||    
T  16041011 caatatttatttgcatttatgcaatcacaccaat 16040978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 16042787 - 16042654
Alignment:
Q  142 ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcac 241  Q
    ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||    
T  16042787 ttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcac 16042688  T
Q  242 caata-ttacttgcataaatgcattcacaccaat 274  Q
    ||||| ||| ||||||  ||||| ||||||||||    
T  16042687 caatatttatttgcatttatgcaatcacaccaat 16042654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 18618189 - 18618279
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| || || |||||||||||||||||| |||||| ||||||||    
T  18618189 atatatatattcacccaccatatcataataaacaatgtatatggattcacaaaaatcatcaccttcacataatttgacatcacttacatga 18618279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 21495792 - 21495652
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || |||||||||||  |||||||||||||||| |    
T  21495792 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtctacacaacaactcaccaaa 21495693  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  ||||||||| ||| ||||||  ||||| ||||||||||    
T  21495692 tcatcaccaatatttatttgcatttatgcaatcacaccaat 21495652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 22885142 - 22885282
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| ||||| |||  || |||  ||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |    
T  22885142 tcaccaattggatatataaacatatttgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaa 22885241  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  ||||||||| ||| ||||||  ||||| ||||||||||    
T  22885242 tcatcaccaatatttatttgcatttatgcaatcacaccaat 22885282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 17500642 - 17500698
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  17500642 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 17500698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 20177491 - 20177435
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20177491 ccatcagtcatgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 20177435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 20177580 - 20177524
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  20177580 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 20177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 20222218 - 20222162
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20222218 ccatcagtcatgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 20222162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 20222307 - 20222251
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  20222307 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 20222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 314
Target Start/End: Original strand, 20708412 - 20708561
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattacttgcataaatgca 263  Q
    |||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||| | ||||||||| | |  | ||||| | |||    
T  20708412 ccatcagtcatgaatgcatgaacacatgactcaacaacaaatgcatatgttcacacaaacaattcaccacaatctcaccaacact--tagcatataggca 20708509  T
Q  264 ttca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    |||| || ||||||| |||| || | |||||||| ||||| |||||||||||    
T  20708510 ttcaccaacaattcaccattacttgccatatatgcactcagcaacaattcac 20708561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 16000775 - 16000837
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16000775 cgtcaccatcagtcatgaatgcatgaacatatgactcaacaacaaatgcatatgttcacacaa 16000837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 18262964 - 18262908
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  18262964 ccatcagtcatgaatgcatgaacatatgactcgacaacaatacatatgttcacacaa 18262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 45468820 - 45468760
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacaca 221  Q
    |||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  45468820 cgtcaccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgtttacaca 45468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 16040893 - 16040854
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatat 375  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  16040893 accatatcataataaacaatgtatatggactcaccaatat 16040854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 16042569 - 16042530
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatat 375  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  16042569 accatatcataataaacaatgtatatggactcaccaatat 16042530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 384
Target Start/End: Complemental strand, 17151293 - 17151222
Alignment:
Q  314 caacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcacctt 384  Q
    |||||| |||| |||||||| |||| ||||||||||||  |||||||||||||||||||| || ||||||||    
T  17151293 caacataatatatatattcaaccacaatatcataataaggaatgtatatggattcaccaaaatcatcacctt 17151222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 21495905 - 21495860
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  21495905 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 21495860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 20177410 - 20177346
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||| |||||| |||||||||||  ||| |||| |||| |||||| ||||||||||||||||    
T  20177410 attcgtcaccatcagtcatgtatgcacaaacttatgtctcagcaacaacgcatatgttcacacaa 20177346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 20222137 - 20222073
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||| |||||| |||||||||||  ||| |||| |||| |||||| ||||||||||||||||    
T  20222137 attcgtcaccatcagtcatgtatgcacaaacttatgtctcagcaacaacgcatatgttcacacaa 20222073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 20708264 - 20708308
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||    
T  20708264 ttcacaattagaactcatgccacaacatgatatgttcctagacac 20708308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 18119588 - 18119538
Alignment:
Q  167 catcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttca 217  Q
    |||||| |||||||||||||| ||||||||||||| |||| ||||| ||||    
T  18119588 catcaaccatgtatgcatgaatatatgactcaacaccaatacatatattca 18119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 17500726 - 17500787
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||||||| || |||||||  |||||||||||| |||||||||| ||||    
T  17500726 cgtcaccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcatacaa 17500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 22885027 - 22885072
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||    
T  22885027 ttcacaactaggactcatgtcaccttatgatatgatcctagacaca 22885072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 16000632 - 16000676
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| |||||||||||||||||| || |||| ||||||||||    
T  16000632 ttcacaattaggactcatgccacaacgtggtatgttcctagacac 16000676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 45468733 - 45468649
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    |||| |||||| ||||||||| || |||||||   ||| ||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  45468733 cgtcaccatcagtcatgtatgtataaacatatatttcagcaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 45468649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 45476088 - 45476044
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||||    
T  45476088 ttcacaattaggactcatgccacaatatgatatgcccctagacac 45476044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 133; Significance: 5e-69; HSPs: 5)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 28072 - 28272
Alignment:
Q  196 tcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatata 294  Q
    ||||||||||| ||||||||||  ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28072 tcaacaacaatacatatgttcatgcaaacaattaaccatattctcaccaatattacttgcataaatgcattcacaccaattcgtcatttctcgacatata 28171  T
Q  295 tgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatt 393  Q
    || ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||    
T  28172 tgcactcaccaacaattcacaacaacatatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcatctccacatcatt 28271  T
Q  394 t 394  Q
    |    
T  28272 t 28272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 40068 - 40268
Alignment:
Q  196 tcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaatgcattcacaccaattcatcatttctcgacatata 294  Q
    ||||||||||| ||||||||||  ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40068 tcaacaacaatacatatgttcatgcaaacaattaaccatattctcaccaatattacttgcataaatgcattcacaccaattcgtcatttctcgacatata 40167  T
Q  295 tgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatt 393  Q
    || ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||    
T  40168 tgcactcaccaacaattcacaacaacatatatatattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcatctccacatcatt 40267  T
Q  394 t 394  Q
    |    
T  40268 t 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 27862 - 28016
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27862 accggtctcatcaatatttaggccgtcgcccataatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 27961  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27962 atgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 39858 - 40012
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39858 accggtctcatcaatatttaggccgtcgcccataatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 39957  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39958 atgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 26847 - 26970
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||  ||||| ||||||    
T  26847 accggtctcaccaatatttaggccgtcgcccatgatgccgacagaacatcataatcacaccatttggatatataaaaatatccgtcctcatcagtcatgt 26946  T
Q  179 atgcatgaacatatgactcaacaa 202  Q
    ||||| ||||||||||||||||||    
T  26947 atgcacgaacatatgactcaacaa 26970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 20252739 - 20252935
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  20252739 accggtctcaccaatatttaggccgtcacccatgatgccgacagaacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 20252838  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaatattacttgcataaatgcattcacaccaat 274  Q
    ||||||||||||||  || ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20252839 atgcatgaacatatatcttaacaacaatacatatgttcatacaaacaactcaccatattctcaccaatattacttgcatttatgcaatcacaccaat 20252935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 32650474 - 32650565
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  32650474 attcacaacaacatat--atattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcacccttacataatttcacatca 32650565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 18164795 - 18164851
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  18164795 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 18164851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 18164876 - 18164963
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    ||||||| |||||||||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  18164876 attcgtcaccatcaatcatgtatgtataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 18164963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 20253288 - 20253359
Alignment:
Q  314 caacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcacctt 384  Q
    ||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||| || ||||||||    
T  20253288 caacatcatatatatattcacccaccatatcataataaggaatgtatatggattcaccaaaatcatcacctt 20253359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 20192827 - 20192878
Alignment:
Q  174 catgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaa 225  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  20192827 catgtatgcatgaacatatgactcgacaataatgcatatgttcacccaacaa 20192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 25093474 - 25093523
Alignment:
Q  169 tcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  25093474 tcaaccatgtatgcatgaacatatgactcgacaataatgcatatgttcac 25093523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 20253050 - 20253124
Alignment:
Q  335 caccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||||| |||||||||||| |  | |||||||||||||| | ||||||||| |||||||||| |||||||||||||    
T  20253050 caccatgtcataataaaca-tacacatggattcaccaatgtcatcaccttctcataatttcatatcaattacatga 20253124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 18623408 - 18623365
Alignment:
Q  172 atcatgtatgcatgaacatatgactcaacaacaatgcatatgttca 217  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||    
T  18623408 atcatgaatgcatgaacatatgactca--aacaatgcatatgttca 18623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 19699233 - 19699079
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19699233 accggtctcaccaatatttaggccgtcgcccatgatgccgacataacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 19699134  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19699133 atgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 19709818 - 19709664
Alignment:
Q  79 accggtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgt 178  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19709818 accggtctcaccaatatttaggccgtcgcccatgatgccgacataacatcataatctcaccatttggatatataaaaatatccgtctccatcagtcatgt 19709719  T
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 232  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19709718 atgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19709664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 143 - 277
Target Start/End: Original strand, 22737260 - 22737393
Alignment:
Q  143 tggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcacc 242  Q
    ||||||||||||| ||| || | ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  22737260 tggatatataaaa-tatccgccaccatcaggcatgtatgcatgaacatatgactcaacaacaatgcatatgttcccacaacaactcaccatattcacacc 22737358  T
Q  243 aatattacttgcataaatgcattcacaccaattca 277  Q
    |||||||||||||||| ||||||||||||||||||    
T  22737359 aatattacttgcataattgcattcacaccaattca 22737393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 330
Target Start/End: Complemental strand, 55378225 - 55378056
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||| |||  ||||||||| |||| ||| |||| | | ||||||||||||||||||||||||    
T  55378225 cgtcaccatcagtcatgtatgcataaacatatacctcaacaataataaatatgttcatacaaacaattcac-acaatctcaccaatattacttgcataaa 55378127  T
Q  260 tgcattcacaccaattcatcatttctcgacatatatgaactcaccaacaattcacaacatcatatttatat 330  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55378126 tgcatccacaccaatttatcatttctcgacatatatgaactcaccaacaattcacaacatcatatatatat 55378056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 55378474 - 55378242
Alignment:
Q  16 caactacattcacaactaggactcatgccacaa-catgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtc 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||        ||||||| || ||||||| ||  ||||    
T  55378474 caaccacattcacaactaggactcatgccacaatcatgatatgatcctagacacaactctatatgcatgcggtaccggtcacaccaatatt-aggccgtc 55378376  T
Q  106 gcccctgatgccgacataacatcataatctcaccat--------ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactc 197  Q
    |||| ||||||||||| |||||||||||| ||||||        |||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  55378375 gccc-tgatgccgacagaacatcataatcacaccatcgcaccatttggatatataaaaatatccgtcaccatcagtcatgtatgcatgaacgtatgactc 55378277  T
Q  198 aacaacaatgcatatgttcacacaacaactcacca 232  Q
    ||||||||||||||||||||||||| |||||||||    
T  55378276 aacaacaatgcatatgttcacacaataactcacca 55378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 8043928 - 8044032
Alignment:
Q  291 tatatgaactcaccaacaattcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacat 389  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| || |||||    
T  8043928 tatatggactcaccaacaattcacaacatcatatatatattcacccaccacatcataataaacaatgtatatggattcaccaatatcatcatctccacat 8044027  T
Q  390 aattt 394  Q
     ||||    
T  8044028 cattt 8044032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 23271628 - 23271500
Alignment:
Q  146 atatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaat 245  Q
    |||||||||||||| ||||  || |||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  ||||||||    
T  23271628 atatataaaaatatccgtcatcaccaaaaatgtatgcatgaacatatgactcaataacaatgcatatgtccacacaacaactcaccatatcatcaccaat 23271529  T
Q  246 attacttgcataaatgcattcacaccaat 274  Q
    |||| ||||||  ||||| | ||||||||    
T  23271528 attatttgcatttatgcaattacaccaat 23271500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 19699062 - 19698948
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||  |    
T  19699062 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcattta 19698963  T
Q  260 tgcattcacaccaat 274  Q
    |||| ||||||||||    
T  19698962 tgcaatcacaccaat 19698948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 19709647 - 19709533
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatattctcaccaatattacttgcataaa 259  Q
    |||| |||||| |||||||||||| |||||||  |||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||  |    
T  19709647 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatattacttgcattta 19709548  T
Q  260 tgcattcacaccaat 274  Q
    |||| ||||||||||    
T  19709547 tgcaatcacaccaat 19709533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 55378027 - 55377937
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  55378027 atatatatattcacccaccatatcataataaataatgtatatggatccaccaatatcatcaccttcacataatttcacatcaaatacatga 55377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 14503080 - 14502967
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |    
T  14503080 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaa 14502981  T
Q  235 ttctcaccaatatt 248  Q
    |  |||||||||||    
T  14502980 tcatcaccaatatt 14502967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 9794005 - 9794102
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 232  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  9794005 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 9794102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 32462017 - 32461904
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||| ||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  32462017 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatggacatatgactcaataataatgcatatgtccacacaacaactcatcata 32461918  T
Q  235 ttctcaccaatatt 248  Q
    |  |||||||||||    
T  32461917 tcatcaccaatatt 32461904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 14910960 - 14911051
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| |||| ||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||    
T  14910960 attcacaacaacatat--atattcacccaccaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacatca 14911051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 8043710 - 8043803
Alignment:
Q  142 ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatat 235  Q
    ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  8043710 ttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaacaactcaccatat 8043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 14570029 - 14570090
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14570029 cgtcaccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaa 14570090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 23271474 - 23271400
Alignment:
Q  335 caccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||| ||||| |||||||    
T  23271474 caccatatcataataaacaatgtatatggattcaccaatatca-ccccttcacataatctcatatcaaatacatga 23271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 7966155 - 7966094
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  7966155 cgtcaccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 7966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 12346750 - 12346693
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  12346750 cgtcaccatcgatcatgaatgcatgaacatatgactcaacaacaatgcatatgttcac 12346693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 40902271 - 40902210
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  40902271 cgtcaccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 40902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 41918332 - 41918276
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  41918332 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 41918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 19019432 - 19019503
Alignment:
Q  314 caacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcacctt 384  Q
    ||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||| || ||||||||    
T  19019432 caacatcatatatatattcacccaccatatcataataaggaatgtatatggattcaccaaaatcatcacctt 19019503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 12336073 - 12336020
Alignment:
Q  165 tccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 218  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||    
T  12336073 tccatcagtcatgaatgcatgaacatatgaatcaacaacaatgcatatgttcac 12336020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 13448583 - 13448534
Alignment:
Q  173 tcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  13448583 tcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 13448534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 13595587 - 13595429
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gc 254  Q
    |||||||  ||||| ||||| |||| |||||||||||||||||||| |||||||||||| |||| ||||| |||||| | ||||||||  |  ||||  |    
T  13595587 attcgtcatcatcagtcatgaatgcttgaacatatgactcaacaacaaatgcatatgtttacacaaacaattcaccacaatctcacca--aacacttaac 13595490  T
Q  255 ataaatgcattcac-accaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||| |||||||||| | ||||||| | || || |||||||||| |||||||||||||||||    
T  13595489 atatatgcattcacaaacaattcaccgttacttgacatatatgcactcaccaacaattcac 13595429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 41918248 - 41918187
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  41918248 cgtcaccatcagtcatgtatgcataaacatatatctcaacaacaatgcatatgttcacacaa 41918187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 22737065 - 22737109
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  22737065 ttcacaactaggactcatgccacatcatgatatgatcctagacac 22737109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 8373473 - 8373544
Alignment:
Q  314 caacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcacctt 384  Q
    |||||| |||| |||||||||| |||||||||||||||  |||||||||||||||||||| || ||||||||    
T  8373473 caacataatatatatattcacccaccatatcataataaggaatgtatatggattcaccaaaatcatcacctt 8373544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 19019193 - 19019267
Alignment:
Q  335 caccatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||||| |||||||||||| |  | |||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  19019193 caccatgtcataataaaca-tacacatggattcaccaatatcatcaccttctcataatttcatatcaattacatga 19019267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 14502913 - 14502868
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcac 381  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  14502913 accatatcataataaacaatgtatatggactcaccaatatcatcac 14502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 19623575 - 19623520
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| |||||||||||| |||||||||||| || |||||||||||||||||||||    
T  19623575 ccatcagtcatgtatgcatcaacatatgactcgac-acaatgcatatgttcacacaa 19623520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 314
Target Start/End: Complemental strand, 40902177 - 40902028
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gcataaatgca 263  Q
    |||||| ||||||||| || |||||||  |||||||||||| |||||||||| || ||||| |||||| | ||||||||  |  |||| ||||| |||||    
T  40902177 ccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccacaatctcacca--aacacttagcatatatgca 40902080  T
Q  264 ttca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    |||| || |||||||   || || |||||||||| |||||||||||||||||    
T  40902079 ttcaccaacaattcacagttacttgacatatatgcactcaccaacaattcac 40902028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 375
Target Start/End: Original strand, 9794186 - 9794225
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatat 375  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  9794186 accatatcataataaacaatgtatatggactcaccaatat 9794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 7848903 - 7849036
Alignment:
Q  83 gtctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatctcaccatttggatatataaaaatattcgtctccatcaatcatgtatgc 182  Q
    |||||| ||||| |||| | ||||||  ||||||||||| ||||||||| ||||||| || ||||||||||  ||   | |||| | |||||||  ||||    
T  7848903 gtctcaccaataattaggttgtcgcctttgatgccgacagaacatcatagtctcaccgtt-ggatatataaccatc--cctctc-accaatcatacatgc 7848998  T
Q  183 atgaacatatgactcaacaacaatgcatatgttcacac 220  Q
    |||| |||||||||| ||||||||| ||||||||||||    
T  7848999 atgagcatatgactctacaacaatgtatatgttcacac 7849036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 23271773 - 23271728
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  23271773 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 23271728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 19082489 - 19082441
Alignment:
Q  175 atgtatgcatgaacatatgactcaa-caacaatgcatatgttcacacaa 222  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  19082489 atgtatgcatgaacatatgcctcaaacaacaaagcatatgttcacacaa 19082441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 8043584 - 8043627
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagaca 67  Q
    ||||||||||||||||||| |||  |||||||||||||||||||    
T  8043584 ttcacaactaggactcatgtcacctcatgatatgatcctagaca 8043627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 13448738 - 13448695
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagaca 67  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  13448738 ttcacaactaggactcatgccacaatatgatatgtccctagaca 13448695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 22737482 - 22737537
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatat 375  Q
    |||| |||||||||| ||||||||||||||||||| |||||||| |||| ||||||    
T  22737482 atatatatattcacccaccatatcataataaacaacgtatatggtttcatcaatat 22737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 9793891 - 9793936
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||    
T  9793891 ttcacaactaggactcatgtcaccttatgatatgatcctagacaca 9793936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 32462130 - 32462085
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||    
T  32462130 ttcacaactaggactcatgtcacctcatgatatgatcctggacaca 32462085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 13595727 - 13595683
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||    
T  13595727 ttcacaattaggactcatgccacaacatggtatgtccctagacac 13595683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 118; Significance: 4e-60; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 166063 - 165794
Alignment:
Q  27 acaactaggactcatgccacaacatgatatgatcctagacaca-ccctatatg--------accggtctcaacaatatttagttcgtcgcccctgatgcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||| ||||| || |||||||  ||| |||| |||||||    
T  166063 acaactaggactcatgccacaacatgatatgatcctagacacaaccctatatgcatgcggtaccgatctcacca-tatttaggccgtagcccatgatgcc 165965  T
Q  118 gacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaaca 204  Q
    |||| ||||||||||||             |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  165964 gacagaacatcataatcatcaccaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaaca 165865  T
Q  205 atgcatatgttcacacaacaactcaccatattctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||  ||||| ||||||||||    
T  165864 atgcatatgttcacacaacaactcaccaaattctcaccaatatttatttgcatttatgcaatcacaccaat 165794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 382
Target Start/End: Complemental strand, 165663 - 165617
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcacc 382  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||    
T  165663 accatatcataataaacaatgtatttggactcaccaatatcatcacc 165617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 165767 - 165722
Alignment:
Q  337 ccatatcataataaacaatgtatatggattcaccaatattatcacc 382  Q
    |||||||| ||||||||||||||||||| ||| |||||| ||||||    
T  165767 ccatatcacaataaacaatgtatatggactcatcaatatcatcacc 165722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 24 - 236
Target Start/End: Complemental strand, 9739 - 9516
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatga--------ccggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||         ||| ||||| ||||| ||||   ||||||| ||||    
T  9739 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggttccgatctcaccaataattaggctgtcgcccatgat 9640  T
Q  115 gccgacataacatcataatc-tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatg 213  Q
    || |||| |||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  9639 gctgacagaacatcataatcatcaccatttggatatataaaaatatacatctccatcagtcatgtatgcatgaacgtatgactcaacgacaatgcatatg 9540  T
Q  214 ttcacac-aacaactcaccatatt 236  Q
    ||||||| ||||||||||||||||    
T  9539 ttcacacaaacaactcaccatatt 9516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 9503 - 9442
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||| ||||||| |||||||  |||||||||||| |||||||||| ||||    
T  9503 cgtcaccatcagtcatctatgcataaacatatatctcaacaacaatacatatgttcatacaa 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 84 - 255
Target Start/End: Original strand, 2439 - 2610
Alignment:
Q  84 tctcaacaatatttagttcgtcgcccctgatgccgacataacatcataatc-tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgc 182  Q
    ||||| ||||| ||||  |||||||| ||||||||| | |||||||||||| ||||||||| ||||| ||||| ||| | ||||||||| ||||||||||    
T  2439 tctcaccaataattaggccgtcgcccatgatgccgatagaacatcataatcatcaccatttagatatgtaaaa-tatccatctccatcagtcatgtatgc 2537  T
Q  183 atgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatattacttgca 255  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  2538 atgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaattctcaccaatattatttgca 2610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 7555 - 7421
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    ||||||||||||||||||||| ||| | |||| |||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |    
T  7555 tcaccatttggatatataaaa-tatccatctcgatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaa 7457  T
Q  235 ttctcaccaatattacttgcataaatgcattcacac 270  Q
    ||||||||||||| | ||||||  ||||| ||||||    
T  7456 ttctcaccaatatcatttgcatttatgcaatcacac 7421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 274
Target Start/End: Complemental strand, 58012 - 57872
Alignment:
Q  136 caccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatat 235  Q
    ||||| ||||||||||||| |||| ||||  || |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58012 caccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatat 57913  T
Q  236 tctcaccaata--ttacttgcataaatgcattcacaccaat 274  Q
      |||||||||  ||| ||||||  ||||| ||||||||||    
T  57912 catcaccaatattttatttgcatttatgcaatcacaccaat 57872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 58126 - 58082
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  58126 ttcacaactaggactcatgtcacctcatgatatgatcctagacac 58082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 1616 - 1728
Alignment:
Q  136 caccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatat 235  Q
    ||||| ||||||||||||| |||| ||||  || |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1616 caccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatat 1715  T
Q  236 tctcaccaatatt 248  Q
      |||||||||||    
T  1716 catcaccaatatt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 1502 - 1546
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||||||||||||| |||  |||||||||||| |||||||    
T  1502 ttcacaactaggactcatgtcacctcatgatatgatcatagacac 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 24309 - 24205
Alignment:
Q  291 tatatgaactcaccaacaattcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacat 389  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| || |||||    
T  24309 tatatggactcaccaacaattcacaacatcatatatatattcacccaccacatcataataaacaatgtatatggattcaccaatatcatcatctccacat 24210  T
Q  390 aattt 394  Q
     ||||    
T  24209 cattt 24205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 24503 - 24434
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaa 244  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||    
T  24503 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 17872 - 17786
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataattt 394  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||| | |||||| |||| || ||||| ||||    
T  17872 attcacaacatcatatatatattcacccaccacatcgtaataaacaatgtatatggatttatcaatatcatcatctccacatcattt 17786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 24330 - 24294
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaa 372  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24330 accatatcataataaacaatgtatatggactcaccaa 24294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 69; Significance: 8e-31; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 35309 - 35177
Alignment:
Q  143 tggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcacc 242  Q
    |||||||||||| |||| ||||  || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||    
T  35309 tggatatataaacatatccgtcatcaccaattatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcactatatcatcacc 35210  T
Q  243 aat-attacttgcataaatgcattcacaccaat 274  Q
    ||| |||| ||||||  ||||| || |||||||    
T  35209 aataattatttgcatttatgcaatcgcaccaat 35177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 223394 - 223303
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  223394 attcacaacaacatat--atattcacccaccatatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatca 223303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 35128 - 35078
Alignment:
Q  358 atatggattcaccaatattatcaccttcacataatttcacatcaattacat 408  Q
    |||||||||||||||||| ||||||||| |||||||||  |||||||||||    
T  35128 atatggattcaccaatatcatcaccttctcataatttcctatcaattacat 35078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 42325 - 42563
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc-ctatatg--------accggtctcaacaatatttagttcgtcgcccctgat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||        |||  ||| | ||||| ||||  |||||||| ||||    
T  42325 ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtaccaatctgaccaataattaggccgtcgcccatgat 42424  T
Q  115 gccgacataacatcataatc-------------tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaaca 201  Q
    ||||| | |||||||||||              ||||||||| ||||| ||||| ||| | ||||||||| ||||||||||||||||||||||||||| |    
T  42425 gccgatagaacatcataattatcaccaaaatcatcaccatttagatatgtaaaa-tatccatctccatcagtcatgtatgcatgaacatatgactcaata 42523  T
Q  202 acaatgcatatgttcacacaacaactcaccatattctcac 241  Q
    | ||||||||||| ||||||||||||||||| ||||||||    
T  42524 ataatgcatatgtccacacaacaactcaccaaattctcac 42563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 34241 - 34345
Alignment:
Q  291 tatatgaactcaccaacaattcacaacatcatatttatattca-ccaccatatcataataaacaatgtatatggattcaccaatattatcaccttcacat 389  Q
    |||||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||| |||| || |||||    
T  34241 tatatggactcaccaacaattcacaacatcatatatatattcacccaccacatcataataaccaatgtatatggattcaccaatatcatcatctccacat 34340  T
Q  390 aattt 394  Q
     ||||    
T  34341 cattt 34345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 30040 - 30161
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacacacc--ctatatg--------accggtc-tcaacaatatttagttcgtcgcccctg 112  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||| |  |||||||        |||| || ||| ||||||||||  |||||||| ||    
T  30040 ttcacaactaggactcatgtcacctcatgatatgatcctagacacaacacctatatgcatgcggtaccgttcatcaccaatatttaggccgtcgcccatg 30139  T
Q  113 atgccgacataacatcataatc 134  Q
    ||||||||| ||||||||||||    
T  30140 atgccgacaaaacatcataatc 30161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 34220 - 34256
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaa 372  Q
    |||||||||||||||| |||||||||||| |||||||    
T  34220 accatatcataataaagaatgtatatggactcaccaa 34256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 16615 - 16728
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  16615 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 16714  T
Q  235 ttctcaccaatatt 248  Q
    |  |||||||||||    
T  16715 tcatcaccaatatt 16728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 16782 - 16827
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcac 381  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  16782 accatatcataataaacaatgtatatggactcaccaatatcatcac 16827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 16514 - 16559
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    |||||||||||||||| || |||  |||||||||||||||||||||    
T  16514 ttcacaactaggactcgtgtcacctcatgatatgatcctagacaca 16559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 2148 - 2042
Alignment:
Q  142 ttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcac 241  Q
    ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||    
T  2148 ttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcac 2049  T
Q  242 caatatt 248  Q
    |||||||    
T  2048 caatatt 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 1988 - 1916
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||| | ||||||||| |||| ||||| |||||||    
T  1988 accatatcataataa-caatgtatatggactcaccaatatcatctcattcacataa-ttcatatcaaatacatga 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 2267 - 2222
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  2267 ttcacaactaggactcatgtcacctcatgatatgatcctagacaca 2222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 35725 - 35591
Alignment:
Q  140 atttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctc 239  Q
    ||||||||||||||| |||| ||||  || |||  |||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||  ||    
T  35725 atttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgacttaataataatgcatatgtccacacaacaactcaccatatcatc 35626  T
Q  240 accaata-ttacttgcataaatgcattcacaccaa 273  Q
    ||||||| ||| ||||||  ||||| |||||||||    
T  35625 accaatatttatttgcatttatgcaatcacaccaa 35591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 166 - 314
Target Start/End: Complemental strand, 98536 - 98386
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gcataaatgc 262  Q
    |||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||  |  ||||  |||| ||||    
T  98536 ccatcagtcatgaatgcgtgaacatatgactcaacaacaaatgcatatgttcacacaaacaattcaccacattctcacca--aacacttaacatatatgc 98439  T
Q  263 attca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||||| || ||||||| |||| || ||||||||||||||||||||||||||||    
T  98438 attcaccaacaattcaccattacttgacatatatgaactcaccaacaattcac 98386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 57; Significance: 1e-23; HSPs: 5)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 44784 - 44884
Alignment:
Q  175 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaata-ttacttgcataaatgcattcacaccaa 273  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||||||| ||| ||||||  ||||| |||||||||    
T  44784 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaa 44883  T
Q  274 t 274  Q
    |    
T  44884 t 44884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 52940 - 53080
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| ||||  |||  || |||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |    
T  52940 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaa 53039  T
Q  235 ttctcaccaata-ttacttgcataaatgcattcacaccaat 274  Q
    |  ||||||||| ||| ||||||  ||||| ||||||||||    
T  53040 tcatcaccaatatttatttgcatttatgcaatcacaccaat 53080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 53330 - 53420
Alignment:
Q  321 atatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatcaattacatga 410  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||| | ||| || ||||||||| ||||||||||||||| ||||||||    
T  53330 atatatatattcacccaccatatcataataaagaatgtatatggattaatcaaaatcatcaccttctcataatttcacatcacttacatga 53420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 52827 - 52871
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  52827 ttcacaactaggactcatgtcacctcatgatatgatcctagacac 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 44631 - 44675
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||||| ||||||| |||  ||||||||||||||||||||    
T  44631 ttcacaactagaactcatgtcacctcatgatatgatcctagacac 44675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 14929 - 14832
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 232  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  14929 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 14832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 14748 - 14709
Alignment:
Q  336 accatatcataataaacaatgtatatggattcaccaatat 375  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  14748 accatatcataataaacaatgtatatggactcaccaatat 14709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 1382 - 1473
Alignment:
Q  309 attcacaacatcatatttatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacatca 401  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||||||||||||    
T  1382 attcacaacaacatat--atattcacccaccatatcataataaacaatgtatatcgatacaccaatatcatcacccttacataatttcacatca 1473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 247347 - 247286
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  247347 cgtcaccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaa 247286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 7e-19; HSPs: 5)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 20741 - 20797
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20741 ccatcagtcatgaatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 20797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 28725 - 28781
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28725 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 28781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 314
Target Start/End: Original strand, 28809 - 28963
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gcataa 258  Q
    |||| |||||| ||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | ||||||||  |  |||| |||||     
T  28809 cgtcaccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcacca--aacacttagcatat 28906  T
Q  259 atgcattca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||||||||| || ||||||| |||  |  | |||||||| |||||||||||||||||    
T  28907 atgcattcaccaacaattcaccatcacatgtcatatatgcactcaccaacaattcac 28963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 20830 - 20909
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    |||||| ||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  20830 ccatcagtcatgtatgaataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 20909  T

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Target: scaffold0165; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 28567 - 28621
Alignment:
Q  14 atcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||||  ||||||| ||||||||||||||||| ||||||||  |||||||||    
T  28567 atcaactattttcacaattaggactcatgccacaatatgatatggccctagacac 28621  T

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Target: scaffold0133 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 3267 - 3203
Alignment:
Q  158 attcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    ||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  3267 attcgtcaccatcaaacatgaatgcatgaacatatgactctacaacaatgcatatgttcacacaa 3203  T

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Target: scaffold0133; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 3170 - 3091
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatattctcaccaa 244  Q
    |||||| ||||||||| || |||||||  |||||||||||| ||||||||||||| ||||| |||||| | |||||||||    
T  3170 ccatcagtcatgtatgtataaacatatatctcaacaacaatacatatgttcacacaaacaattcaccacaatctcaccaa 3091  T

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Target: scaffold0124 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 399
Target Start/End: Complemental strand, 36601 - 36527
Alignment:
Q  326 tatattcacc-accatatcataataaacaatgtatatggattcaccaatattatcaccttcacataatttcacat 399  Q
    |||||||||| |||| ||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  36601 tatattcacccaccaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacat 36527  T

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Target: scaffold1666 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 1054 - 945
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 234  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||| |||||| |||| || ||||||||||| ||||||| |||||||||||    
T  1054 tcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaagatatgaatcaataataatgcatatgtccacacaaaaactcaccata 955  T
Q  235 ttctcaccaa 244  Q
    |  |||||||    
T  954 tcatcaccaa 945  T

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Target: scaffold0561 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 314
Target Start/End: Complemental strand, 4316 - 4166
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcaccatattctcaccaatattactt-gcataaatgc 262  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||| | ||||||||  |  |||| ||||| ||||    
T  4316 ccatcagtcatgaatgcatgaacatatgactcaacaacaaatgcatatgtttacactaacaattcaccacaatctcacca--aacacttagcatatatgc 4219  T
Q  263 attca-caccaattcatcatttctcgacatatatgaactcaccaacaattcac 314  Q
    ||||| || ||||||| | || || |||||||||| |||||| ||||||||||    
T  4218 attcaccaacaattcaccgttacttgacatatatgcactcacaaacaattcac 4166  T

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Target: scaffold0561; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 4464 - 4420
Alignment:
Q  24 ttcacaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||    
T  4464 ttcacaattaggactcatgccacaacatggtatgtccctagacac 4420  T

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Target: scaffold0173 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 4149 - 4278
Alignment:
Q  146 atatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaat 245  Q
    ||||||||| |||| ||||  || |||  ||| ||||||||||||||||||| | || ||||||||||| ||||||||||||||||| ||  ||||||||    
T  4149 atatataaacatatccgtcatcaccaaatatgcatgcatgaacatatgactcgataataatgcatatgtccacacaacaactcaccaaatcatcaccaat 4248  T
Q  246 a-ttacttgcataaatgcattcacaccaat 274  Q
    | ||| ||||||  ||||| ||||||||||    
T  4249 atttatttgcatttatgcaatcacaccaat 4278  T

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Target: scaffold0173; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 4009 - 4055
Alignment:
Q  23 attcacaactaggactcatgccacaacatgatatgatcctagacaca 69  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||    
T  4009 attcacaactaggactcatgtcacctcatgatatgatcatagacaca 4055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 2688 - 2632
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2688 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 2632  T

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Target: scaffold0409; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 10943 - 10887
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  10943 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 10887  T

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Target: scaffold0148 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 36517 - 36573
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  36517 ccatcagtcatgaatgcatgaacatatgactcgacaacaatgcatatgttcacacaa 36573  T

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Target: scaffold0191 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 303 - 140
Alignment:
Q  90 caatatttagttcgtcgcccctgatgccgacataacatcataatc------------tcaccatttggatatataaaaatattcgtctccatcaatcatg 177  Q
    |||||||||| ||||||||| ||||||||| | ||||||||||||            |||||| ||||||||||||| |||| ||||  || |||  |||    
T  303 caatatttaggtcgtcgcccatgatgccgatagaacatcataatcatcaccaaattatcaccaattggatatataaacatatccgtcatcaccaaatatg 204  T
Q  178 tatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaa 244  Q
    |||||   |||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||    
T  203 tatgc---aacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 140  T

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Target: scaffold0700 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 1203 - 1264
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  1203 cgtcaccatcagtcatgaatgcatgaacatatgagtcgacaacaatgcatatgttcacacaa 1264  T

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Target: scaffold1068 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 1868 - 1924
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  1868 ccatcagtcatgaatgcatgaacatatgacttgacaacaatgcatatgttcacacaa 1924  T

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Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 104568 - 104624
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  104568 ccatcagtcatgaatgcatgaacatatgactcgacaagaatgcatatgttcacacaa 104624  T

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Target: scaffold0503 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 10224 - 10285
Alignment:
Q  161 cgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||| |||||| ||||| ||||||| ||||||||||| ||||||||||||||||||| ||||    
T  10224 cgtcaccatcagtcatgaatgcatggacatatgactcgacaacaatgcatatgttcatacaa 10285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 2618 - 2659
Alignment:
Q  334 ccaccatatcataataaacaatgtatatggattcaccaatat 375  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  2618 ccaccatatcataataaacaatgtatatggactcaccaatat 2659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 67162 - 67085
Alignment:
Q  135 tcaccatttggatatataaaaatattcgtctccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatat 212  Q
    |||||| ||||||||||||| |||| ||||  || |||  ||||||||||||||||||||||||| || |||||||||    
T  67162 tcaccagttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 67085  T

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Target: scaffold0329 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 1809 - 1849
Alignment:
Q  179 atgcatgaacatatgactcaacaacaatgcatatgttcaca 219  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  1809 atgcatgaacatatgactcaacaacaatgcatatattcaca 1849  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 8740 - 8781
Alignment:
Q  27 acaactaggactcatgccacaacatgatatgatcctagacac 68  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  8740 acaactaggactcatgccacaacatgttatgttcctagacac 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 36340 - 36283
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 222  Q
    |||||| ||||| |||||||||||||||| |||| ||| |||||||||||||||||||    
T  36340 ccatcagtcatgaatgcatgaacatatgattcaataacaaatgcatatgttcacacaa 36283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 36246 - 36190
Alignment:
Q  166 ccatcaatcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 222  Q
    |||||| ||||| ||| || |||| ||| |||||||||| |||||||||||||||||    
T  36246 ccatcagtcatgaatgtataaacaaatgtctcaacaacattgcatatgttcacacaa 36190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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