View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6883_high_15 (Length: 268)
Name: NF6883_high_15
Description: NF6883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6883_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 7 - 254
Target Start/End: Original strand, 45167788 - 45168035
Alignment:
| Q |
7 |
caaattaacatggtgtgcaatcattcttttttgttgaatggaactgcaaaagataatatattgatacatggtattccttcattttatatcttccatatac |
106 |
Q |
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| T |
45167788 |
caaattaacatggtgtgcaatcattcttttttgttgaatggaactgcaaaagataatatattgatacatggtattccttcattttatatcttccatatac |
45167887 |
T |
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| Q |
107 |
actttgcacaattcatgtatatatttgtaggaaaatacgttcatatattatcatgttaattgttttggaaattctcatttagggtgtgtaaagtattcca |
206 |
Q |
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| T |
45167888 |
actttgcacaactcatgtatatatttgtaggaaaatacgttcatatattatcatgttaattgttttggaaattctcatttagggtgtgtaaagtattcca |
45167987 |
T |
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| Q |
207 |
ctataaacaaactcatgaaagaacaaattgacatgatgcatatccaca |
254 |
Q |
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| T |
45167988 |
ctataaacaaactcatgaaagaacaaattgacatgatgcatattcaca |
45168035 |
T |
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