View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6883_low_4 (Length: 612)

Name: NF6883_low_4
Description: NF6883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6883_low_4
NF6883_low_4
[»] chr3 (41 HSPs)
chr3 (175-521)||(24618637-24618983)
chr3 (379-546)||(1923117-1923278)
chr3 (382-540)||(46194123-46194280)
chr3 (416-546)||(1334732-1334861)
chr3 (382-547)||(38600723-38600887)
chr3 (410-545)||(44218979-44219112)
chr3 (394-517)||(36790750-36790872)
chr3 (420-546)||(48409611-48409738)
chr3 (382-539)||(51164986-51165142)
chr3 (382-473)||(30261420-30261509)
chr3 (433-540)||(41287295-41287402)
chr3 (382-509)||(26479785-26479918)
chr3 (420-473)||(9218244-9218297)
chr3 (420-545)||(21296458-21296582)
chr3 (415-547)||(9017827-9017958)
chr3 (382-474)||(17776911-17777002)
chr3 (382-474)||(19078212-19078303)
chr3 (420-540)||(39329705-39329824)
chr3 (412-475)||(2868672-2868734)
chr3 (437-539)||(54021429-54021531)
chr3 (417-545)||(54122176-54122303)
chr3 (388-462)||(39144770-39144845)
chr3 (418-541)||(53051058-53051180)
chr3 (436-539)||(53754034-53754137)
chr3 (382-540)||(5245445-5245602)
chr3 (382-460)||(36315651-36315729)
chr3 (436-526)||(38524263-38524352)
chr3 (399-540)||(32977724-32977864)
chr3 (382-439)||(38215761-38215818)
chr3 (382-546)||(21585327-21585490)
chr3 (420-547)||(42547061-42547187)
chr3 (412-475)||(51636843-51636905)
chr3 (399-437)||(26832197-26832235)
chr3 (388-450)||(34081017-34081079)
chr3 (416-501)||(39866504-39866588)
chr3 (420-545)||(43639471-43639595)
chr3 (410-455)||(47684858-47684903)
chr3 (412-479)||(11529023-11529092)
chr3 (400-440)||(12745094-12745134)
chr3 (459-547)||(31650937-31651024)
chr3 (490-546)||(45819676-45819732)
[»] chr8 (51 HSPs)
chr8 (18-344)||(1354819-1355144)
chr8 (18-344)||(1344418-1344744)
chr8 (382-546)||(14689987-14690151)
chr8 (393-540)||(8394180-8394329)
chr8 (382-540)||(33743809-33743967)
chr8 (382-540)||(14748620-14748780)
chr8 (382-517)||(32231302-32231437)
chr8 (415-538)||(45420888-45421011)
chr8 (415-531)||(1494197-1494313)
chr8 (400-540)||(25174519-25174659)
chr8 (400-546)||(5392076-5392221)
chr8 (415-540)||(886397-886522)
chr8 (393-546)||(8566041-8566191)
chr8 (420-547)||(2195494-2195620)
chr8 (393-540)||(39998196-39998342)
chr8 (412-547)||(42412330-42412464)
chr8 (254-331)||(10043378-10043455)
chr8 (418-539)||(29638335-29638455)
chr8 (437-545)||(14117490-14117598)
chr8 (382-540)||(29451382-29451540)
chr8 (418-541)||(28791340-28791462)
chr8 (420-539)||(40077705-40077823)
chr8 (411-540)||(27868271-27868399)
chr8 (388-541)||(27973609-27973761)
chr8 (388-541)||(28030878-28031030)
chr8 (416-531)||(9734119-9734232)
chr8 (382-473)||(2797139-2797230)
chr8 (412-547)||(7258314-7258448)
chr8 (385-455)||(8840445-8840514)
chr8 (421-539)||(15559086-15559203)
chr8 (392-546)||(37459377-37459521)
chr8 (377-541)||(41726553-41726714)
chr8 (382-473)||(36011909-36012001)
chr8 (410-488)||(325028-325105)
chr8 (415-541)||(29615830-29615955)
chr8 (443-541)||(41759607-41759705)
chr8 (382-471)||(2875005-2875094)
chr8 (423-540)||(5423122-5423238)
chr8 (419-531)||(26677115-26677227)
chr8 (416-540)||(139055-139178)
chr8 (405-540)||(11637173-11637308)
chr8 (412-475)||(37703085-37703147)
chr8 (437-540)||(5878196-5878300)
chr8 (415-497)||(12653763-12653844)
chr8 (422-540)||(28802800-28802917)
chr8 (460-540)||(325110-325190)
chr8 (430-466)||(10728885-10728921)
chr8 (409-453)||(33890478-33890522)
chr8 (412-464)||(36649664-36649715)
chr8 (429-477)||(44225885-44225933)
chr8 (417-541)||(44790374-44790497)
[»] chr1 (73 HSPs)
chr1 (86-344)||(29051806-29052064)
chr1 (380-546)||(29756057-29756223)
chr1 (382-547)||(26583754-26583919)
chr1 (417-546)||(37541065-37541194)
chr1 (382-546)||(24131318-24131481)
chr1 (382-540)||(26924037-26924195)
chr1 (382-525)||(3160604-3160747)
chr1 (387-540)||(46363332-46363486)
chr1 (381-531)||(50926789-50926939)
chr1 (416-540)||(5503453-5503575)
chr1 (382-546)||(29225322-29225489)
chr1 (415-540)||(37925192-37925321)
chr1 (387-540)||(40754336-40754488)
chr1 (415-531)||(16956585-16956701)
chr1 (382-540)||(34813950-34814107)
chr1 (382-540)||(27932746-27932908)
chr1 (382-546)||(4466072-4466235)
chr1 (388-468)||(26760381-26760461)
chr1 (412-546)||(16040104-16040237)
chr1 (443-540)||(31798451-31798546)
chr1 (393-540)||(3718779-3718924)
chr1 (382-545)||(11425787-11425949)
chr1 (387-516)||(14090697-14090822)
chr1 (437-543)||(36232761-36232867)
chr1 (382-462)||(2886323-2886403)
chr1 (416-540)||(10587533-10587656)
chr1 (396-539)||(25983565-25983702)
chr1 (418-540)||(27209921-27210042)
chr1 (419-540)||(705303-705424)
chr1 (381-517)||(36326122-36326257)
chr1 (382-545)||(2219366-2219528)
chr1 (417-536)||(13409730-13409849)
chr1 (418-517)||(28706577-28706675)
chr1 (400-547)||(32348244-32348390)
chr1 (437-546)||(14352593-14352705)
chr1 (418-475)||(4659529-4659585)
chr1 (437-541)||(37495861-37495963)
chr1 (412-540)||(27391380-27391507)
chr1 (410-466)||(34332217-34332272)
chr1 (420-540)||(40061842-40061961)
chr1 (417-473)||(40988450-40988506)
chr1 (415-475)||(49494114-49494173)
chr1 (412-524)||(49944981-49945092)
chr1 (417-541)||(50267391-50267514)
chr1 (437-541)||(51049540-51049643)
chr1 (410-473)||(7224500-7224563)
chr1 (344-383)||(29051382-29051421)
chr1 (382-547)||(29225779-29225942)
chr1 (457-540)||(33149306-33149389)
chr1 (415-531)||(44580558-44580676)
chr1 (429-539)||(45889212-45889322)
chr1 (417-518)||(50773301-50773399)
chr1 (482-540)||(2886204-2886262)
chr1 (417-539)||(21304760-21304880)
chr1 (437-531)||(9590554-9590650)
chr1 (412-501)||(40019831-40019919)
chr1 (416-540)||(32587798-32587921)
chr1 (415-475)||(36467146-36467205)
chr1 (412-547)||(28839365-28839499)
chr1 (412-474)||(5040523-5040584)
chr1 (417-475)||(5442438-5442495)
chr1 (416-478)||(6787342-6787403)
chr1 (439-541)||(12267605-12267707)
chr1 (412-473)||(25418743-25418802)
chr1 (410-467)||(39420692-39420750)
chr1 (420-465)||(2571469-2571514)
chr1 (409-454)||(18186142-18186187)
chr1 (419-547)||(27831872-27831997)
chr1 (415-479)||(37525134-37525195)
chr1 (419-467)||(28424279-28424327)
chr1 (412-475)||(42309528-42309589)
chr1 (462-538)||(46968113-46968189)
chr1 (415-543)||(52830365-52830492)
[»] chr4 (52 HSPs)
chr4 (382-546)||(28330821-28330985)
chr4 (393-541)||(8759811-8759959)
chr4 (382-546)||(20964204-20964368)
chr4 (382-546)||(37315838-37316002)
chr4 (419-540)||(38319944-38320065)
chr4 (393-540)||(32949775-32949923)
chr4 (416-546)||(42132840-42132972)
chr4 (415-540)||(49218732-49218856)
chr4 (396-540)||(53848679-53848823)
chr4 (416-540)||(48400582-48400705)
chr4 (416-540)||(22020462-22020584)
chr4 (382-543)||(25902378-25902539)
chr4 (382-473)||(5499349-5499440)
chr4 (382-501)||(54217441-54217562)
chr4 (382-540)||(22872303-22872462)
chr4 (437-546)||(42051627-42051736)
chr4 (396-467)||(18872585-18872656)
chr4 (409-540)||(47277625-47277756)
chr4 (400-540)||(4360343-4360482)
chr4 (382-482)||(41594764-41594864)
chr4 (400-547)||(33047518-33047664)
chr4 (417-540)||(34790903-34791026)
chr4 (399-540)||(39052835-39052975)
chr4 (380-544)||(28279866-28280029)
chr4 (420-540)||(41436514-41436633)
chr4 (388-464)||(46958828-46958904)
chr4 (400-475)||(8295127-8295201)
chr4 (418-541)||(29550680-29550802)
chr4 (412-547)||(41203763-41203897)
chr4 (409-454)||(36045994-36046039)
chr4 (412-540)||(49448874-49448999)
chr4 (417-473)||(13529961-13530017)
chr4 (400-547)||(42024136-42024282)
chr4 (482-540)||(36047116-36047174)
chr4 (388-445)||(11583647-11583704)
chr4 (412-547)||(40020892-40021029)
chr4 (412-468)||(12619792-12619847)
chr4 (412-540)||(17237076-17237203)
chr4 (412-540)||(38160099-38160226)
chr4 (490-541)||(10099749-10099800)
chr4 (388-547)||(35027420-35027578)
chr4 (437-540)||(35998088-35998191)
chr4 (412-547)||(41710091-41710225)
chr4 (417-455)||(1920846-1920884)
chr4 (420-545)||(25149479-25149604)
chr4 (419-540)||(54729434-54729558)
chr4 (436-537)||(13719811-13719912)
chr4 (442-539)||(49306621-49306718)
chr4 (430-543)||(49401686-49401798)
chr4 (419-475)||(28974404-28974459)
chr4 (410-455)||(38838740-38838787)
chr4 (411-475)||(52676977-52677040)
[»] chr2 (49 HSPs)
chr2 (382-546)||(13222095-13222259)
chr2 (382-545)||(314455-314618)
chr2 (387-540)||(6972462-6972614)
chr2 (382-540)||(4282934-4283093)
chr2 (393-531)||(928466-928603)
chr2 (416-540)||(2048325-2048448)
chr2 (416-547)||(43950399-43950529)
chr2 (416-541)||(9724910-9725034)
chr2 (375-546)||(37528981-37529151)
chr2 (412-546)||(2427387-2427521)
chr2 (411-546)||(38872867-38873000)
chr2 (393-540)||(7213508-7213654)
chr2 (384-547)||(43427005-43427167)
chr2 (418-541)||(24356143-24356265)
chr2 (400-462)||(5425969-5426031)
chr2 (410-540)||(10069530-10069659)
chr2 (417-528)||(38280148-38280258)
chr2 (420-541)||(18181168-18181288)
chr2 (452-539)||(31348545-31348632)
chr2 (379-541)||(39166606-39166771)
chr2 (412-479)||(45464162-45464228)
chr2 (444-546)||(1908472-1908574)
chr2 (418-540)||(18460521-18460642)
chr2 (418-540)||(36748181-36748302)
chr2 (419-546)||(3199925-3200049)
chr2 (411-488)||(14384057-14384133)
chr2 (420-540)||(31592583-31592703)
chr2 (400-540)||(9472455-9472594)
chr2 (412-475)||(32556270-32556330)
chr2 (417-547)||(2756700-2756829)
chr2 (393-475)||(6213778-6213859)
chr2 (417-517)||(14890373-14890470)
chr2 (412-472)||(883100-883159)
chr2 (416-475)||(8550593-8550651)
chr2 (409-528)||(12949908-12950026)
chr2 (412-475)||(28527062-28527124)
chr2 (416-475)||(40965112-40965170)
chr2 (412-475)||(44736964-44737026)
chr2 (417-531)||(3123688-3123801)
chr2 (419-465)||(5007194-5007240)
chr2 (417-503)||(43077678-43077763)
chr2 (405-455)||(44024825-44024875)
chr2 (442-540)||(44424241-44424337)
chr2 (415-475)||(435026-435087)
chr2 (382-478)||(10394202-10394295)
chr2 (399-440)||(14306031-14306072)
chr2 (410-475)||(39159717-39159780)
chr2 (410-475)||(39209414-39209477)
chr2 (430-518)||(39807268-39807355)
[»] chr6 (23 HSPs)
chr6 (393-546)||(15371791-15371943)
chr6 (382-540)||(15325180-15325337)
chr6 (393-540)||(15321153-15321299)
chr6 (395-540)||(15355608-15355752)
chr6 (382-540)||(34803621-34803781)
chr6 (382-541)||(33921386-33921544)
chr6 (393-540)||(15351311-15351457)
chr6 (436-538)||(3166078-3166180)
chr6 (395-547)||(31075854-31076005)
chr6 (436-539)||(3874020-3874123)
chr6 (415-546)||(4552936-4553059)
chr6 (382-466)||(16126318-16126402)
chr6 (417-545)||(3604552-3604679)
chr6 (415-475)||(15081521-15081580)
chr6 (415-479)||(33109467-33109530)
chr6 (97-141)||(34265359-34265403)
chr6 (431-518)||(20027637-20027724)
chr6 (412-478)||(7739465-7739530)
chr6 (387-473)||(20383944-20384030)
chr6 (419-545)||(31265807-31265932)
chr6 (480-546)||(33017958-33018024)
chr6 (399-531)||(9354374-9354505)
chr6 (382-531)||(34703643-34703792)
[»] chr7 (47 HSPs)
chr7 (382-546)||(32776010-32776174)
chr7 (382-541)||(29996945-29997104)
chr7 (386-536)||(47238254-47238404)
chr7 (382-546)||(37264340-37264502)
chr7 (416-540)||(32971968-32972092)
chr7 (416-536)||(23111039-23111159)
chr7 (432-540)||(10355701-10355809)
chr7 (450-546)||(38589761-38589857)
chr7 (396-531)||(8150001-8150135)
chr7 (418-541)||(45218111-45218233)
chr7 (418-540)||(2849288-2849409)
chr7 (387-473)||(33773965-33774051)
chr7 (411-540)||(43007927-43008057)
chr7 (418-546)||(30659433-30659560)
chr7 (417-540)||(9602894-9603017)
chr7 (417-540)||(9830465-9830588)
chr7 (382-540)||(34064248-34064405)
chr7 (411-524)||(6697130-6697242)
chr7 (415-531)||(21446478-21446594)
chr7 (393-472)||(39143601-39143680)
chr7 (375-497)||(27621913-27622035)
chr7 (430-540)||(36070138-36070247)
chr7 (417-473)||(9658937-9658993)
chr7 (400-475)||(11616660-11616733)
chr7 (462-546)||(18731466-18731550)
chr7 (412-496)||(45890805-45890888)
chr7 (437-539)||(39343644-39343744)
chr7 (417-482)||(5724660-5724724)
chr7 (417-545)||(7425829-7425957)
chr7 (410-494)||(36194599-36194684)
chr7 (420-540)||(3667832-3667951)
chr7 (257-313)||(13590862-13590918)
chr7 (159-250)||(13590644-13590735)
chr7 (411-540)||(14648862-14648993)
chr7 (457-540)||(24288456-24288539)
chr7 (412-547)||(29257573-29257707)
chr7 (417-540)||(37490570-37490692)
chr7 (410-478)||(39498768-39498838)
chr7 (400-475)||(44604413-44604487)
chr7 (424-462)||(37496354-37496392)
chr7 (418-475)||(23058916-23058972)
chr7 (399-440)||(31549556-31549597)
chr7 (442-547)||(33584589-33584694)
chr7 (415-472)||(49100453-49100509)
chr7 (415-475)||(30463114-30463173)
chr7 (411-455)||(32346635-32346679)
chr7 (387-539)||(40023649-40023800)
[»] chr5 (43 HSPs)
chr5 (382-539)||(5147413-5147570)
chr5 (382-540)||(38978937-38979095)
chr5 (399-546)||(13016298-13016444)
chr5 (382-540)||(15564810-15564963)
chr5 (399-540)||(13087676-13087816)
chr5 (380-546)||(5357733-5357898)
chr5 (416-538)||(42818938-42819060)
chr5 (394-530)||(4194975-4195112)
chr5 (395-540)||(31090337-31090482)
chr5 (382-545)||(16926006-16926171)
chr5 (382-546)||(39060340-39060503)
chr5 (393-546)||(25111078-25111229)
chr5 (393-546)||(25170169-25170320)
chr5 (380-540)||(31196352-31196512)
chr5 (416-547)||(11099429-11099559)
chr5 (393-546)||(25108600-25108751)
chr5 (393-546)||(25167692-25167843)
chr5 (382-539)||(39060868-39061028)
chr5 (443-540)||(15898224-15898321)
chr5 (481-542)||(7871344-7871405)
chr5 (398-546)||(35988661-35988808)
chr5 (417-545)||(42575591-42575718)
chr5 (419-541)||(4044433-4044553)
chr5 (410-540)||(6172926-6173055)
chr5 (410-539)||(7311128-7311254)
chr5 (418-546)||(36006849-36006973)
chr5 (387-460)||(6629318-6629391)
chr5 (382-536)||(35666922-35667073)
chr5 (382-440)||(22983076-22983134)
chr5 (382-455)||(792095-792168)
chr5 (412-496)||(41594795-41594878)
chr5 (412-475)||(858433-858495)
chr5 (416-475)||(3725284-3725342)
chr5 (382-445)||(15898605-15898668)
chr5 (416-467)||(25344692-25344742)
chr5 (428-467)||(35012812-35012851)
chr5 (436-531)||(35968762-35968857)
chr5 (412-475)||(42211427-42211489)
chr5 (410-460)||(39212500-39212550)
chr5 (411-543)||(4475276-4475405)
chr5 (412-541)||(33988232-33988360)
chr5 (444-524)||(39035834-39035914)
chr5 (415-475)||(41184758-41184817)
[»] scaffold0576 (1 HSPs)
scaffold0576 (395-540)||(598-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (393-539)||(10717-10864)
[»] scaffold0155 (1 HSPs)
scaffold0155 (382-506)||(7838-7960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (415-539)||(12385-12509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (400-475)||(98923-98997)
[»] scaffold0003 (1 HSPs)
scaffold0003 (417-541)||(352415-352536)
[»] scaffold0578 (1 HSPs)
scaffold0578 (419-465)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (415-532)||(9503-9618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (419-540)||(5851-5969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (452-518)||(158068-158134)
[»] scaffold0058 (1 HSPs)
scaffold0058 (419-475)||(14554-14609)
[»] scaffold0009 (1 HSPs)
scaffold0009 (382-462)||(220132-220212)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 175 - 521
Target Start/End: Original strand, 24618637 - 24618983
Alignment:
Q  175 cttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24618637 cttttcggtttctcaatgttaataattctcaaatttacaaagttttctagaggtaattagaaaattcataattagtagtcactttgtttctgatcattgt 24618736  T
Q  275 tatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaaatattcaagtcctaaaacgtttaattgccc 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24618737 tatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaaatattcaagtcctataacgtttaattgccc 24618836  T
Q  375 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618837 aaaaaagtactttctccctcccattttaactgaaccttttgctcgtttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 24618936  T
Q  475 aatgcctttatcaactattggtgtatttttctttagcataaatacaa 521  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||    
T  24618937 agtgcctttatcaactagtggtgtattcttctttagcataaatacaa 24618983  T

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Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 1923278 - 1923117
Alignment:
Q  379 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    ||||||| ||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    ||    
T  1923278 aagtactccctccgtcccattttaactgagccctt-gctcatttcacacttattaagaaaaagtgtataagtgaaa--aagagaaaaatggttt---gtg 1923185  T
Q  479 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || ||||||||| |||||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  1923184 cccttatcaactgttggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 1923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 46194123 - 46194280
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||| ||||||||| || ||  || |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| | ||||     
T  46194123 tactccctccgtcccaatttaactgagcccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgccc 46194222  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||| |||||| | || |||||| ||||||| ||||||||||||| ||||||||    
T  46194223 ttatcaactgttggtgca-ttctctttatcataaatgcaaagtagaatatattgaattg 46194280  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 546
Target Start/End: Original strand, 1334732 - 1334861
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||  |||||||||| | |||||| |||||| |||||||||||  |||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  1334732 ctcatttcacacagattaagaaaa-gcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataa 1334830  T
Q  516 atacaaagtagaatatgttgaattggaagtg 546  Q
    ||  |||||||||||| ||||||||| ||||    
T  1334831 atgtaaagtagaatatattgaattgggagtg 1334861  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 547
Target Start/End: Original strand, 38600723 - 38600887
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||| ||||| || ||| ||| |||||||| |||  |||||||||| |||||||| |||||  |||||||||||| |||| | | |||    
T  38600723 tactccctccatcccagtttaattggaccattttctcatttcgcacagattaagaaaa-gtgtataaatgaaaaagagagaaaaatgattttgagtccct 38600821  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    ||||||| |||||||| ||| ||||||| |||||||  |||||| ||||| ||||| ||| |||||    
T  38600822 ttatcaagtattggtgcattcttctttaccataaatgtaaagtataatatattgaactgggagtga 38600887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 545
Target Start/End: Original strand, 44218979 - 44219112
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||| | || |||    || | |||||| |||   | |||    
T  44218979 cttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtgtctt--gtaagtgttggtgcattccccatta 44219076  T
Q  510 gcataaatacaaagtagaatatgttgaattggaagt 545  Q
     ||||||||||||||||||||| |||||||||||||    
T  44219077 tcataaatacaaagtagaatatattgaattggaagt 44219112  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 517
Target Start/End: Original strand, 36790750 - 36790872
Alignment:
Q  394 cccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactatt 493  Q
    |||||||||||||| ||||   ||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  ||| |  ||  ||||||||||||    
T  36790750 cccattttaactgagccttga-ctcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaatgagtttgagcgcacttatcaactatt 36790848  T
Q  494 ggtgtatttttctttagcataaat 517  Q
    |||||||| ||||||| |||||||    
T  36790849 ggtgtattcttctttatcataaat 36790872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 420 - 546
Target Start/End: Complemental strand, 48409738 - 48409611
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa--tggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    |||||||| |||||||||||| ||||||| |||||| |||||| |||  | ||||| | || |||| |||| |||||||| ||| ||||||| |||||||    
T  48409738 tttcacacatattaagaaaaa-tgtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaagtattggtggattcttctttatcataaat 48409640  T
Q  518 acaaagtagaatatgttgaattggaagtg 546  Q
      |||||||||||||||||||||| ||||    
T  48409639 gtaaagtagaatatgttgaattgggagtg 48409611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 539
Target Start/End: Complemental strand, 51165142 - 51164986
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||| | ||||| ||| || ||| || |||||||||  |||||||||| |||||||| | |||| |||||||||||  |||| | || ||    
T  51165142 tactccctccgtccgagtttaattgagccattttctgatttcacacaaattaagaaaa-gtgtataaataaaagagagagaaaaataattttgagtgtct 51165044  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    ||||||| |||||||| ||| ||||||| |||||||  |||||||||||| |||||||    
T  51165043 ttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 51164986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 473
Target Start/End: Original strand, 30261420 - 30261509
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||||| | |||||||||| ||||  |||||||||| ||||||||||| |||||    
T  30261420 tactccctccgtcccattttaactgagccttttgttcatttcacgcatattaagaaagagtg--taagtgaaagagagagaaaaatagtttt 30261509  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 540
Target Start/End: Complemental strand, 41287402 - 41287295
Alignment:
Q  433 aagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatg 532  Q
    |||||||  |||||||||||||| ||||||||||||||||| | |  |||| |||| ||||| || ||| ||||||| |||||||  ||||||||||||     
T  41287402 aagaaaacatgtataagtgaaagagagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatata 41287303  T
Q  533 ttgaattg 540  Q
    ||||||||    
T  41287302 ttgaattg 41287295  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 26479785 - 26479918
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataa------gtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||  | |||||||||||| || || | |||||||||||||||||||||||||| |||||      |||  || |||||| | |||||||| |    
T  26479785 tacttcctccgcctcattttaactgagcccttggttcatttcacacttattaagaaaaagtatataagtgtgtgtgtgagagagagagagatggttttga 26479884  T
Q  476 atgcctttatcaactattggtgtatttttcttta 509  Q
    |||| ||||||||||||||||| ||| |||||||    
T  26479885 atgcatttatcaactattggtgcattcttcttta 26479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 9218297 - 9218244
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  9218297 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 9218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 545
Target Start/End: Original strand, 21296458 - 21296582
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| || ||||| ||| ||||||| |||| | ||||| |||||| ||||||||||  || | || |||||||| |||||||  || ||||||| |    
T  21296458 tttcacacatactaagacaaa-tgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatgc 21296556  T
Q  520 aaagtagaatatgttgaattggaagt 545  Q
    |||||||||||| |||||||||||||    
T  21296557 aaagtagaatatattgaattggaagt 21296582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 547
Target Start/End: Complemental strand, 9017958 - 9017827
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||| |||||| ||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| | || |||||||| ||| | |  ||  |||    
T  9017958 gctcatttcacacatattaaaaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattata 9017860  T
Q  515 aatacaaagtagaatatgttgaattggaagtga 547  Q
    ||| ||||||  ||||| |||||||||||||||    
T  9017859 aatgcaaagtgaaatatattgaattggaagtga 9017827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 474
Target Start/End: Original strand, 17776911 - 17777002
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  17776911 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 17777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 474
Target Start/End: Original strand, 19078212 - 19078303
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  19078212 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 19078303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 540
Target Start/End: Original strand, 39329705 - 39329824
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| |||||||||||| |||||||||||||| || ||| |||| ||||| |||| | || | || |||||||| ||| ||  ||| ||||||| |    
T  39329705 tttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 39329803  T
Q  520 aaagtagaatatgttgaattg 540  Q
    |||||||||||| ||||||||    
T  39329804 aaagtagaatatattgaattg 39329824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 2868734 - 2868672
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | |||||||||||||||||||    
T  2868734 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaaaatggttttaa 2868672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 539
Target Start/End: Original strand, 54021429 - 54021531
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| | |||| |||||||||||| |||| | || ||||||||| ||||| || ||| |||||||  ||||||  |||||||||||| ||||    
T  54021429 aaaagtgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgtaaagtagaatatattga 54021528  T
Q  537 att 539  Q
    |||    
T  54021529 att 54021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 545
Target Start/End: Original strand, 54122176 - 54122303
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||  ||| | || |||||||| ||| | |  || ||||||    
T  54122176 tcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatgtttttgttaagtattggtgcattctccactatcataaa 54122274  T
Q  517 tacaaagtagaatatgttgaattggaagt 545  Q
    | ||||||  ||||| |||||||||||||    
T  54122275 tgcaaagtgaaatatattgaattggaagt 54122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 39144845 - 39144770
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaaga-aaaagtgtataagtgaaagggagaga 462  Q
    |||| ||||||| ||| ||| ||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  39144845 ctccatcccattataagtgagccttttgttcatttcacacatattaagaaaaaaatgtataagtgaaagagagaga 39144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 53051180 - 53051058
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| |||| |||| ||| ||| || |||| |||||||    
T  53051180 catttcacacagattaagaaaa-gtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtatttgtgcattcttgtttatcataaat 53051082  T
Q  518 acaaagtagaatatgttgaattgg 541  Q
      |||||| ||||| |||||||||    
T  53051081 gtaaagtataatatattgaattgg 53051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 539
Target Start/End: Original strand, 53754034 - 53754137
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 535  Q
    ||||||||||||| |||||  |||||||||||| |||| | || ||||   || |||||||| ||| ||||||| |||||||  |||||||||||| |||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaatatattg 53754133  T
Q  536 aatt 539  Q
    ||||    
T  53754134 aatt 53754137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 5245602 - 5245445
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||||  |||||||| || ||||||||  ||| || |||||||| ||| ||||||  |||| | ||||||||||| ||||||| |||      
T  5245602 tactccctccgtcccagattaactgagccatttgctcaaatcatacatattaagacaaa-tgtatacatgaaggagagagaaaaatagttttaagtgctc 5245504  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || | || |||||||||||| | |  || |||||||||||||| |||||| ||||||||    
T  5245503 ttgttaagtattggtgtattctccaatatcataaatacaaagtggaatatattgaattg 5245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 460
Target Start/End: Original strand, 36315651 - 36315729
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 460  Q
    |||| ||||| ||| ||| ||||| | | ||||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  36315651 tactccctccgtcctattataactaagctttttgctcattccacacatattaagaaaaagtgtataagtaaaagagaga 36315729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 526
Target Start/End: Original strand, 38524263 - 38524352
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtag 526  Q
    ||||| ||||||||||||||  | |||||||| ||||| ||||  |||||||| ||||| |||||||||| | | ||||||||||||||||    
T  38524263 aaaaaatgtataagtgaaagaaaaagaaaaatagttttgaatgt-tttatcaagtattgatgtatttttcatcatcataaatacaaagtag 38524352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 399 - 540
Target Start/End: Original strand, 32977724 - 32977864
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 498  Q
    ||||||||| || |||  |||||||||||  |||||||||| ||||||||   |||| | ||||||||| ||||| | ||| ||| |||| ||||| ||     
T  32977724 tttaactgagccattttttcatttcacacggattaagaaaa-gtgtataaagtaaagagggagaaaaatagttttgagtgcatttttcaagtattgatgc 32977822  T
Q  499 atttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||||| |||||||  ||  |||||||| ||||||||    
T  32977823 atttttctttatcataaatgtaatttagaatatattgaattg 32977864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 439
Target Start/End: Original strand, 38215761 - 38215818
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa 439  Q
    |||||||||| || || ||||| |||| |||||||||||||||||||||| |||||||    
T  38215761 tacttcctccgtctcaatttaaatgaatcttttgctcatttcacacttataaagaaaa 38215818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 21585327 - 21585490
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||||||||| ||||| ||| |  ||| |||||| |||| ||||| ||||||| | ||| |||||| |  ||||||||||| |||| | || ||    
T  21585327 tactccctccctcccaatttaattgagcaatttactcattccacatttattgagaaaaa-tatattagtgaaggacagagaaaaatgattttgagtgtct 21585425  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || | || |||||||  ||| ||||||| |||||||  ||| |||||||| ||| ||||||||||    
T  21585426 ttgttaattattggttcattcttctttatcataaatgtaaaatagaatatattgtattggaagtg 21585490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 547
Target Start/End: Original strand, 42547061 - 42547187
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| |||||||||||| | ||||||| |||| |||| |||||| ||||| |||| | || | || |||||||| ||| ||  ||| ||||||| |    
T  42547061 tttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 42547159  T
Q  520 aaagtagaatatgttgaattggaagtga 547  Q
    |||  ||||||| ||||||||| |||||    
T  42547160 aaaagagaatatattgaattgggagtga 42547187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 51636843 - 51636905
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||| |||||||| | ||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  51636843 tttgttcatttcataattattaagaaaaa-tgtttaagtgaaggagagagaaaaatggttttaa 51636905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 26832235 - 26832197
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaa 437  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  26832235 tttaactgagccttttgctcaattcacacttattaagaa 26832197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 34081017 - 34081079
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagt 450  Q
    |||| ||||||||||||  || |||||| | |||| |||| ||||||||||||||||||||||    
T  34081017 ctccatcccattttaacccaaacttttgtttattttacacatattaagaaaaagtgtataagt 34081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 501
Target Start/End: Original strand, 39866504 - 39866588
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatt 501  Q
    |||||||||||| |||||||||||| ||||||| |||| |  |||||||||| ||||||| ||  ||| | || ||||||||||||    
T  39866504 ctcatttcacacatattaagaaaaa-tgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtatt 39866588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 545
Target Start/End: Original strand, 43639471 - 43639595
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| |||||||| ||| | ||||| |||| | ||||||||||||||||||| |||  || | || ||||| || ||||| |  || ||||||| |    
T  43639471 tttcacacatattaagacaaa-tatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcattttccactatcataaatgc 43639569  T
Q  520 aaagtagaatatgttgaattggaagt 545  Q
    |||||  ||||| |||||||||||||    
T  43639570 aaagtgaaatatattgaattggaagt 43639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 47684903 - 47684858
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  47684903 cttttgttcatttcacacatattaagaaaaggtgtacaagtgaaag 47684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 479
Target Start/End: Original strand, 11529023 - 11529092
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagag---aaaaatggttttaaatgc 479  Q
    |||||||||||||||| |||||||||||| | ||||| ||||||  ||||   ||||||||||||||||||    
T  11529023 tttgctcatttcacacatattaagaaaaa-tatataaatgaaagaaagagaaaaaaaatggttttaaatgc 11529092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 12745134 - 12745094
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaa 440  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  12745134 ttaactgagtcttttgctcatttcacacatattaagaaaaa 12745094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 547
Target Start/End: Complemental strand, 31651024 - 31650937
Alignment:
Q  459 gagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||||||| |||||| || |||  |||| |||| ||| ||||||| ||| |||||||||||| |||||||| || ||||| ||||||    
T  31651024 gagaaaaatgattttaagtgtcttg-tcaagtatttgtgcatttttcattatcataaatacaaattagaatatattaaattgaaagtga 31650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 45819732 - 45819676
Alignment:
Q  490 tattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    ||||||| ||||| || ||| |||||||| |||||| |||||||||||||| |||||    
T  45819732 tattggtttatttatcattatcataaataaaaagtaaaatatgttgaattgaaagtg 45819676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 344
Target Start/End: Complemental strand, 1355144 - 1354819
Alignment:
Q  18 tgagtgcttgagctatctactcgatcgataatctcattttatgtcgatcactcgacaatatctgttttggtagagtaagcattttaaaattttgaatagc 117  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||    
T  1355144 tgagtgcttgagctatctactcaatcgataatctcgttttatgtcgatcacttcacaatatctgttttggtagagtaagcatttttaaattttgaattgc 1355045  T
Q  118 tttatcactatttcaactatgcaacaatttccttgtgattgtgaagtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagt 217  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||  |||||| |||||| | ||| |||||||||   ||||    
T  1355044 ttcatcactatttcaactatgcaagaatttccttgtgattgtgaagtcaatgtgttactatttagtttcttaatgtt-agaatgctcaaatttgtgaagt 1354946  T
Q  218 tttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaac 317  Q
    |||  ||| |||||| |||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1354945 tttttagatgtaatttgaaaattcataattagtaattactttgtttctgatcattgttatgttaatttctctaaggaccagattgatgaaatcatgaaac 1354846  T
Q  318 tgctttagatttagggtgtcctctcaa 344  Q
    ||||||| ||||||||| |||| ||||    
T  1354845 tgctttaaatttagggtttcctttcaa 1354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 18 - 344
Target Start/End: Original strand, 1344418 - 1344744
Alignment:
Q  18 tgagtgcttgagctatctactcgatcgataatctcattttatgtcgatcactcgacaatatctgttttggtagagtaagcattttaaaattttgaatagc 117  Q
    |||||||||||||||||||||  |||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||    
T  1344418 tgagtgcttgagctatctacttaatcggtaatctcattttatgccgatcgctctacaatatctgttttggtagagtaagcatttttaaattttgaattgc 1344517  T
Q  118 tttatcactatttcaactatgcaacaatttccttgtgattgtgaagtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagt 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |  ||||||||   ||||    
T  1344518 ttcatcactatttcaactatgcaacaatttccttgtgattgtgaagtcagtgtgttactatttggtttctcaatgttaaaactaatcaaatttttgaagt 1344617  T
Q  218 tttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaac 317  Q
      || ||| |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||  ||||  ||||||||    
T  1344618 cctctagatgtaatttgaaaattcataattagtaatcactttgtttctgatcattgttatgttaatttctctaaggaccagattagtgaaggcatgaaac 1344717  T
Q  318 tgctttagatttagggtgtcctctcaa 344  Q
    ||||||| ||||||||| |||| ||||    
T  1344718 tgctttaaatttagggtttcctttcaa 1344744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 14690151 - 14689987
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || |     
T  14690151 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtcc 14690052  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||||||||||||| ||| || |||| ||||||| ||||||||||||| ||||||||| ||||    
T  14690051 ttatcaactattggtgcattcttttttatcataaatgcaaagtagaatatattgaattgggagtg 14689987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 393 - 540
Target Start/End: Original strand, 8394180 - 8394329
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaaggga--gagaaaaatggttttaaatgcctttatcaact 490  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||  ||| ||  ||||||||||  |||||||||  |||||||||    
T  8394180 tcccattttaactgaactcttaactcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaact 8394279  T
Q  491 attggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||| ||| ||||||| ||||||||||||||| ||||| ||||||||    
T  8394280 attggtgcattattctttatcataaatacaaagtaaaatatattgaattg 8394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 33743967 - 33743809
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgct-catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    |||||||||  ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| | ||      
T  33743967 tacttcctcgatcccattttaattgaac-tcttgcttcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgta 33743869  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
     |||||||||||| ||| ||| ||||||| ||||||||||||||||||||| || |||||    
T  33743868 cttatcaactatttgtgcattcttctttatcataaatacaaagtagaatatattaaattg 33743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 14748620 - 14748780
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaa--agggagagaaaaatggttttaaatgc 479  Q
    |||| ||||| ||||||||||||||| || ||  ||||||| ||||||||||||||||||||||||||||||  || |||||||| |||| ||| | |||    
T  14748620 tactccctccgtcccattttaactgagcccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgc 14748719  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
      |||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  14748720 tcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattg 14748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 382 - 517
Target Start/End: Original strand, 32231302 - 32231437
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||| ||| || ||  ||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| | ||||     
T  32231302 tactccctccgtcccattttaattgagcccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaatggttttgagtgccc 32231401  T
Q  482 ttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||||| |||||| ||||||| |||||||    
T  32231402 ttatcaactattgatgtattcttctttatcataaat 32231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 538
Target Start/End: Original strand, 45420888 - 45421011
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| || |||||| |||| | ||| ||||||| ||||    
T  45420888 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcata 45420987  T
Q  515 aatacaaagtagaatatgttgaat 538  Q
    ||| ||||||| ||||| ||||||    
T  45420988 aatgcaaagtaaaatatattgaat 45421011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 531
Target Start/End: Original strand, 1494197 - 1494313
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||||||||||| |||| |||||| ||||||| | |||||||||| |||| | |||| ||||||| ||||| || ||| ||||||| ||||    
T  1494197 gctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcata 1494296  T
Q  515 aatacaaagtagaatat 531  Q
    ||| |||||||||||||    
T  1494297 aatgcaaagtagaatat 1494313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 400 - 540
Target Start/End: Original strand, 25174519 - 25174659
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| |||||  ||||||||| | ||||||||||||| ||||||||| |||| |||| || |||| |||| | |||| |||| ||||||||||| |    
T  25174519 ttaactgagcctttgactcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgca 25174618  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || |||||||  |||||| ||||||||||||| ||||||||    
T  25174619 ttattctttattataaatgcaaagtagaatatattgaattg 25174659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 546
Target Start/End: Complemental strand, 5392221 - 5392076
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| || |||||||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| ||| ||| |||| |||||||| |    
T  5392221 ttaactgagccatttgctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgca 5392123  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || | |  || ||||||| |||||| |||||| ||||||||| ||||    
T  5392122 ttctccactatcataaatgcaaagtggaatatattgaattgggagtg 5392076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 886397 - 886522
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||  |||||  ||| | || | |||||||||||  ||| ||| ||||||| ||||    
T  886397 gctcatttcacacttattaagaaaaagtgtacaagtgaaagagagagggaaatgagtttgattgtccttatcaactatctgtgcattcttctttatcata 886496  T
Q  515 aatacaaagtagaatatgttgaattg 540  Q
    ||| ||||||||||||| | ||||||    
T  886497 aatgcaaagtagaatatatcgaattg 886522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 546
Target Start/End: Original strand, 8566041 - 8566191
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    |||||||||||||||  | ||  |||||||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | |||| |||||||||||    
T  8566041 tcccattttaactgagtcattgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaatgtgtttgagtgcccttatcaactat 8566140  T
Q  493 tggtg--tatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || ||  | |||||||||| |||||||     | ||||||| ||||||||||||||    
T  8566141 tgatgcatttttttctttatcataaat-----gcagaatatattgaattggaagtg 8566191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 420 - 547
Target Start/End: Complemental strand, 2195620 - 2195494
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| | || | || | || |||||||| ||| ||  ||| ||||||| |    
T  2195620 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgttaagtattggtgcattctttcttatcataaatgc 2195522  T
Q  520 aaagtagaatatgttgaattggaagtga 547  Q
    |||||||||||| ||||||||| |||||    
T  2195521 aaagtagaatatattgaattgggagtga 2195494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 540
Target Start/End: Complemental strand, 39998342 - 39998196
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||| ||||| ||| || ||| ||||||||| || ||||||||||| | |||||| |||||| |||||||||||| |||||| || ||||||||| |||    
T  39998342 tcccagtttaattgagccattttctcatttcatacatattaagaaaa-gagtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtat 39998244  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    | | | ||| ||||||| |||||||  |||||||||||| ||||||||    
T  39998243 ttgagcattcttctttatcataaatgtaaagtagaatatattgaattg 39998196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 42412330 - 42412464
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||||||||||||||| |||||||||||| |||||||||||| | ||||||||||| ||||||| |||  || |||  |||||||| ||| | | ||| |    
T  42412330 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattctccattatc 42412428  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  42412429 ataaatgcaaagtggaatatattgaattgggagtga 42412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 10043455 - 10043378
Alignment:
Q  254 cactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttag 331  Q
    |||||||||| | |||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  10043455 cactttgtttctgatcactgttatgttaatttctctaaggaccagattgataaaataatgaaactgctttaaatttag 10043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 29638455 - 29638335
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| |||||||| ||||||  |||||||||||||||| ||||||||| |||| |||||||  ||| ||||||| |||||||    
T  29638455 catttcacacagattaagaaaa-gtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaat 29638357  T
Q  518 acaaagtagaatatgttgaatt 539  Q
      |||||| ||||| |||||||    
T  29638356 gtaaagtataatatattgaatt 29638335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 545
Target Start/End: Complemental strand, 14117598 - 14117490
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    ||||||||||||  ||||| ||||||||| | ||||| | ||||||| |||| |||||||||||| ||||||| |||||||  ||||| |||||| ||||    
T  14117598 aaaagtgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaatatattga 14117499  T
Q  537 attggaagt 545  Q
    |||| ||||    
T  14117498 attgaaagt 14117490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 29451540 - 29451382
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa---gtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||    ||||||| |||||  ||||||||||| ||||| ||      
T  29451540 tacttcctccatcccattttaaccgaaccttttgttcatttcacacatattaagaaaaaatgatgtataaatgaaa--gagagaaaaatagttttgaa-c 29451444  T
Q  479 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
      ||| |||| |||| ||||||| ||  ||| ||||||| ||||||| ||||| ||||||||    
T  29451443 attttgtcaagtattagtgtattctttcttatcataaatccaaagtataatatattgaattg 29451382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 28791462 - 28791340
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| |||| |||||||| ||| ||||||| |||||||    
T  28791462 catttcacacagattaagaaaa-gtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 28791364  T
Q  518 acaaagtagaatatgttgaattgg 541  Q
      ||| |||||||| |||||||||    
T  28791363 gtaaactagaatatattgaattgg 28791340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 539
Target Start/End: Original strand, 40077705 - 40077823
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||| | ||||||||||| |||||||| |||||| |||| ||||||| |||| | || |||| |||| |||||||| ||| ||||||| |||||||      
T  40077705 tttcactcatattaagaaaa-gtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgt 40077803  T
Q  520 aaagtagaatatgttgaatt 539  Q
    |||||||||||| |||||||    
T  40077804 aaagtagaatatattgaatt 40077823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 540
Target Start/End: Original strand, 27868271 - 27868399
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||  ||   || |||| ||||| |  |||| || |||     
T  27868271 ttttgctcatttcacacttattaagaaaaa-tgtattagtgaatgatggagaaaaatggttttacgtgttcttgtcaagtattgatccatttatcattat 27868369  T
Q  511 cataaatacaaagtagaatatgttgaattg 540  Q
    ||||||| ||||||||||||| ||||||||    
T  27868370 cataaatgcaaagtagaatatattgaattg 27868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 541
Target Start/End: Original strand, 27973609 - 27973761
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 487  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||| ||   || |||    
T  27973609 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaagtgttcttgtca 27973707  T
Q  488 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    | ||||| |  ||||  | ||| ||||||| ||||||||||||  |||||||||    
T  27973708 agtattgatccatttaccattatcataaatgcaaagtagaatacattgaattgg 27973761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 541
Target Start/End: Original strand, 28030878 - 28031030
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 487  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||| ||   || |||    
T  28030878 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaagtgttcttgtca 28030976  T
Q  488 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    | ||||| |  ||||  | ||| ||||||| ||||||||||||  |||||||||    
T  28030977 agtattgatccatttaccattatcataaatgcaaagtagaatacattgaattgg 28031030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 531
Target Start/End: Original strand, 9734119 - 9734232
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||| ||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |    |||||||||||||||| ||| ||||||| |||||    
T  9734119 ctcatttcacatttattaaaaaaaaatgtataaatgaaag--agagaaaaatggatttgagtattcttatcaactattggtgcattcttctttatcataa 9734216  T
Q  516 atacaaagtagaatat 531  Q
    || ||||||| |||||    
T  9734217 atgcaaagtaaaatat 9734232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 473
Target Start/End: Complemental strand, 2797230 - 2797139
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||| ||||| ||| ||| ||| ||| | ||||| ||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||    
T  2797230 tactccctccgtccaattataaatgagctttttgttcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaaaatggtttt 2797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 7258314 - 7258448
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||||| |||||||||||||||| ||||| | ||| | |||| |  ||||||||||||||||||  ||  || |||| |||||||| |||| || ||| |    
T  7258314 tttgcttatttcacacttattaaaaaaaa-tatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcatttatcattatc 7258412  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||| |||| |||||||| ||||||||| |||||    
T  7258413 ataaatgcaaactagaatatattgaattgggagtga 7258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 8840514 - 8840445
Alignment:
Q  385 ttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    ||||||| ||||||| ||| ||| ||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  8840514 ttcctccgtcccattataagtgagccttttg-tcatttcacacatattaagaaaaattgtataagtgaaag 8840445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 421 - 539
Target Start/End: Original strand, 15559086 - 15559203
Alignment:
Q  421 ttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaataca 520  Q
    |||||| ||||||||||||| ||||| |||||| | |||| ||||||| |||||| ||   || |||| |||||||||||||  | ||| ||||||| ||    
T  15559086 ttcacatttattaagaaaaa-tgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgca 15559184  T
Q  521 aagtagaatatgttgaatt 539  Q
    ||||||||||| |||||||    
T  15559185 aagtagaatatattgaatt 15559203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 546
Target Start/End: Complemental strand, 37459521 - 37459377
Alignment:
Q  392 ctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaacta 491  Q
    |||||||||||||| |  | || ||||||||||||||||||||| |||||||||||| |||||  |||| |||||||       |||  || ||||||||    
T  37459521 ctcccattttaactaagtcattggctcatttcacacttattaag-aaaagtgtataaatgaaaaagagaaaaaaatg-------atg--ttgatcaacta 37459432  T
Q  492 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    ||| |||||| ||||||| ||||||| |||||| |||||| || |||||| ||||    
T  37459431 ttgatgtattcttctttatcataaatgcaaagttgaatatattaaattgggagtg 37459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 541
Target Start/End: Complemental strand, 41726714 - 41726553
Alignment:
Q  377 aaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaa 476  Q
    |||| |||| ||||| ||||| |||||||||||   ||   ||||||||||  ||||||||||| |||||||  |||||  ||||||| || ||||| |     
T  41726714 aaaattactccctccgtcccagtttaactgaactaattttccatttcacacagattaagaaaaa-tgtataaaagaaag--agagaaatatagttttgag 41726618  T
Q  477 tgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    ||||||| |||| ||||| || ||| ||||||| |||||||  |||||||||||| |||||||||    
T  41726617 tgcctttttcaagtattgttgcattcttctttatcataaatgtaaagtagaatatattgaattgg 41726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 473
Target Start/End: Original strand, 36011909 - 36012001
Alignment:
Q  382 tacttcctccctcccattttaactgaac-cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||||||||| ||||||||||| | ||  |||||| ||||||||||  | ||||||||| ||||||||||||||| || ||| ||||||||||    
T  36011909 tacttcctccgtcccattttaagtcaagtcttttgttcatttcacatatgttaagaaaatgtgtataagtgaaagagaaagagaaatggtttt 36012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 488
Target Start/End: Original strand, 325028 - 325105
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaa 488  Q
    |||||| |||||||| || |||||||| ||| ||||||||||||| ||| |||||||||||||| | ||||||| ||||    
T  325028 cttttgttcatttcaaacatattaagacaaa-tgtataagtgaaaaggaaagaaaaatggttttgattgcctttgtcaa 325105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 29615955 - 29615830
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||| |||||||||||| ||||||| |||| | |||||||||||  ||||||||||  || | || |||||||||| ||| |  |  ||||    
T  29615955 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaataattttaaatgcacttgttaagtattggtgtactttccactgtcata 29615857  T
Q  515 aatacaaagtagaatatgttgaattgg 541  Q
    |||  ||||| |||||| |||||||||    
T  29615856 aatgtaaagtggaatatattgaattgg 29615830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 541
Target Start/End: Original strand, 41759607 - 41759705
Alignment:
Q  443 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    ||||| ||||||| |||| |||||||  ||| | || | || |||| |||||||| ||| ||||||| ||||||||||||||| ||||| |||||||||    
T  41759607 gtatatgtgaaagagagaaaaaaatgagtttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagtaaaatatattgaattgg 41759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 2875005 - 2875094
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtt 471  Q
    |||| ||||| ||||||| ||| | | | ||||| ||||||||||  ||||||||||| ||| |||||||||||  ||||||||||||||    
T  2875005 tactccctccgtcccattataaataagctttttgttcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaaaatggtt 2875094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 540
Target Start/End: Original strand, 5423122 - 5423238
Alignment:
Q  423 cacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaa 522  Q
    ||||| |||||||| ||| || ||||||||||| |||||||||||| |||| | || | || ||||  ||||||||||||  | ||| ||||||||||||    
T  5423122 cacacatattaagataaa-tgcataagtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaa 5423220  T
Q  523 gtagaatatgttgaattg 540  Q
    || ||| || ||||||||    
T  5423221 gtggaagatattgaattg 5423238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 531
Target Start/End: Complemental strand, 26677227 - 26677115
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg-gttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||  ||||||| || | || | || |||||||| |||   | ||| |||||||    
T  26677227 atttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaat 26677129  T
Q  518 acaaagtagaatat 531  Q
     |||||||||||||    
T  26677128 gcaaagtagaatat 26677115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 139178 - 139055
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||| ||||||| |||||||| |  || | || |||||||| ||||| |  || |||||    
T  139178 ctcatttcacacatattaagaaaaa-tgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcattttccgctatcataa 139080  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || |||||| ||||||  |||||||    
T  139079 atgcaaagtggaatataatgaattg 139055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 540
Target Start/End: Complemental strand, 11637308 - 11637173
Alignment:
Q  405 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaa-agggagagaaaaatggttttaaatgcctttatcaactattggtgtatttt 503  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||| ||    ||||||||||| ||||| | || ||||  ||| ||||| |  ||| |    
T  11637308 tgaacattttgttcatgtcacacatattaagaaaaagtgtataagtaaattaagagagaaaaat-gttttgagtgtctttgccaagtattgatacattat 11637210  T
Q  504 tctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||| |||||||  |||||||||||| ||||||||    
T  11637209 tctttatcataaatgtaaagtagaatatattgaattg 11637173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 37703147 - 37703085
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||  |||||||||||| ||||||    
T  37703147 tttgatcatttcacacatattaagaaaaa-tgtataagcgaaaaagagagaaaaatgattttaa 37703085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 540
Target Start/End: Original strand, 5878196 - 5878300
Alignment:
Q  437 aaaagtgtataagtgaaagggaga--gaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgtt 534  Q
    |||||||||||| |||||| ||||  |||||||||||||||||| |||| |||| |||| ||  ||| | | ||| |||||||  |||||||||||| ||    
T  5878196 aaaagtgtataaatgaaagagagagagaaaaatggttttaaatgtctttgtcaagtattagttcattctac-ttatcataaatgtaaagtagaatatatt 5878294  T
Q  535 gaattg 540  Q
    ||||||    
T  5878295 gaattg 5878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 497
Target Start/End: Complemental strand, 12653844 - 12653763
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtg 497  Q
    ||||||||||||| |||||||||||| ||||||| ||||   ||||||||||| ||||||| ||| ||| | || ||||||||    
T  12653844 gctcatttcacacgtattaagaaaaa-tgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtg 12653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 540
Target Start/End: Complemental strand, 28802917 - 28802800
Alignment:
Q  422 tcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaa 521  Q
    |||||| |||||||| ||| ||||||| |||||| ||||||||||||||||||| |||  || | || ||||| | |||| | |  || ||||||| |||    
T  28802917 tcacacgtattaagacaaa-tgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatctattctccactatcataaatgcaa 28802819  T
Q  522 agtagaatatgttgaattg 540  Q
    ||| |||||| ||||||||    
T  28802818 agtggaatatattgaattg 28802800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 540
Target Start/End: Original strand, 325110 - 325190
Alignment:
Q  460 agaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||| | ||||||| |||| |||||||| |||   | ||| |||||||| ||||| |||||| ||||||||    
T  325110 agaaaaatggttttgattgcctttgtcaagtattggtgcattcaccgttatcataaatataaagtggaatatattgaattg 325190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 466
Target Start/End: Original strand, 10728885 - 10728921
Alignment:
Q  430 attaagaaaaagtgtataagtgaaagggagagaaaaa 466  Q
    |||||||||||||||||||||||||| |||| |||||    
T  10728885 attaagaaaaagtgtataagtgaaagagagaaaaaaa 10728921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 33890522 - 33890478
Alignment:
Q  409 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaa 453  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||    
T  33890522 ccttttgctcatttcacacgtattaagaataaatgtataaatgaa 33890478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 36649664 - 36649715
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 464  Q
    |||| |||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  36649664 tttgttcattttacacttattaagaaaaa-tgtaaaagtgaaagagagagaaa 36649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 44225885 - 44225933
Alignment:
Q  429 tattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat 477  Q
    ||||||||||||||||||| |||||||  ||||||||||  ||||||||    
T  44225885 tattaagaaaaagtgtatacgtgaaagaaagagaaaaataattttaaat 44225933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 541
Target Start/End: Original strand, 44790374 - 44790497
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||| |||  || | || |||||||| ||| | |  || ||||||    
T  44790374 tcatttcacacgtattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaa 44790472  T
Q  517 tacaaagtagaatatgttgaattgg 541  Q
    |  ||||| |||||| |||||||||    
T  44790473 tgtaaagtggaatatattgaattgg 44790497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 2e-91; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 86 - 344
Target Start/End: Complemental strand, 29052064 - 29051806
Alignment:
Q  86 ggtagagtaagcattttaaaattttgaatagctttatcactatttcaactatgcaacaatttccttgtgattgtgaagtcagtgtgttacttttcggttt 185  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  29052064 ggtagagtaagcatttttaaattttgaattgcttcatcactatttcaactatgcaacaatttctttgtgattgtgaagtcagtgtgttactatttggttt 29051965  T
Q  186 ctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaattt 285  Q
    ||||||||||  ||| |||||||||   |||||||| | | |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29051964 ctcaatgttagaaatgctcaaatttgtgaagttttctatatgtaatttgaaaattcataattagtagtcactttgtttctgatcattgttatgttaattt 29051865  T
Q  286 ctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaa 344  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  29051864 ctctaaggaccagattgatgaaatcatgaaagtgctttagattttgggtgtcctttcaa 29051806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 29756057 - 29756223
Alignment:
Q  380 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    |||||| ||||| |||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||    
T  29756057 agtactccctccgtcccattttaacggagcccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgc 29756156  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    | |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  29756157 ccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 29756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 382 - 547
Target Start/End: Complemental strand, 26583919 - 26583754
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| | |||||    
T  26583919 tactccctccgtcccattttaactgaacccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcct 26583820  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||||||||||||| ||| ||||||| ||||||| |||| |||||||| ||||||||| |||||    
T  26583819 ttatcaactattggtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtga 26583754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 546
Target Start/End: Original strand, 37541065 - 37541194
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||| |||||||  |||||    
T  37541065 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaa 37541164  T
Q  517 tacaaagtagaatatgttgaattggaagtg 546  Q
    |  |||||||||||| ||||||||||||||    
T  37541165 tgtaaagtagaatatattgaattggaagtg 37541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 24131318 - 24131481
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttg-ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    |||| ||||| |||||||||||||||  | |||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||    
T  24131318 tactccctccgtcccattttaactgagtcatttgactcatttcacacttattaagaaaaagcgtataagtgaaag--agagaaaaatggttttgaatgcc 24131415  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
     ||||||||||| |||| ||| ||||||| ||||||| ||||||| ||||| ||||||||| ||||    
T  24131416 cttatcaactataggtgcattcttctttatcataaatgcaaagtataatatattgaattgggagtg 24131481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 26924037 - 26924195
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||| |||||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | ||||     
T  26924037 tactccctccgtcccgttttaactgagctcttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgccc 26924136  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||| ||||| ||||||||    
T  26924137 ttatcaactattggtgcattcttctttatcataaatgcaaagtataatatattgaattg 26924195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 3160604 - 3160747
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| | ||||     
T  3160604 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgccc 3160703  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagta 525  Q
    || ||||||||||||| ||| ||||||| ||||||| |||||||    
T  3160704 ttgtcaactattggtgcattattctttatcataaatgcaaagta 3160747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 387 - 540
Target Start/End: Original strand, 46363332 - 46363486
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc-ctttat 485  Q
    ||||| ||| ||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||| || |||||| |||||  ||| | ||| ||||||    
T  46363332 cctccgtccaattttaattgagcctttcactcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttat 46363431  T
Q  486 caactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| ||||| ||||||||    
T  46363432 caactattggtgcattcttctttatcataaatgcaaagtaaaatatattgaattg 46363486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 531
Target Start/End: Complemental strand, 50926939 - 50926789
Alignment:
Q  381 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    ||||| ||||| || |||||||||||| | |||| |||||||||||  |||||||||||| ||||||||  |||| ||||||||||||||||| |||||     
T  50926939 gtactccctccgtctcattttaactgagcttttttctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgca 50926840  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 531  Q
    ||| |||| |||||||| ||| ||||||| |||||||  ||||||||||||    
T  50926839 tttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatat 50926789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 5503575 - 5503453
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||  | || |||||||||||||||| ||| ||||||| ||| |    
T  5503575 ctcatttcacacttattaagaaaaagtgtataaatgaa--ggagagaaaaatggttttaggtacccttatcaactattggtgcattcttctttatcatta 5503478  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || ||||||| ||||| ||||||||    
T  5503477 attcaaagtataatatattgaattg 5503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 29225322 - 29225489
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta---taagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||| ||||| ||||||| ||| |||  |||||||||||||||||| |||||||||||||||||   |||||||||| | |||||||||| |||| | ||    
T  29225322 tactccctccgtcccattataattgagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtg 29225421  T
Q  479 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    ||||| | || |||||||| ||| || |||| |||||||  |||||||||||| ||||||||||||||    
T  29225422 cctttgttaagtattggtgcattcttttttatcataaatggaaagtagaatatattgaattggaagtg 29225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 37925192 - 37925321
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggaga----gaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    |||||||| |||| | |||  ||||||| |||||||| |||||||||||     
T  37925192 gctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttat 37925291  T
Q  511 cataaatacaaagtagaatatgttgaattg 540  Q
    ||||||| ||||||||||||| ||||||||    
T  37925292 cataaatgcaaagtagaatatattgaattg 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 387 - 540
Target Start/End: Original strand, 40754336 - 40754488
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 486  Q
    ||||| ||||| ||||||||| |  ||  ||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||| | |||| |||||    
T  40754336 cctccgtcccaatttaactgagctcttgactcatttcatacttattaagaaaaagtgtataagtgaaa--gagagagaaatggttttgagtgcccttatc 40754433  T
Q  487 aa-ctattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || ||||||||| ||| ||||||| ||||||| ||||||||||||| || |||||    
T  40754434 aacctattggtgcattcttctttatcataaatgcaaagtagaatatattaaattg 40754488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 531
Target Start/End: Complemental strand, 16956701 - 16956585
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||| | || |||||| || |||| ||| ||| || |||| ||||    
T  16956701 gctcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcata 16956602  T
Q  515 aatacaaagtagaatat 531  Q
    |||| ||||||||||||    
T  16956601 aatataaagtagaatat 16956585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 34814107 - 34813950
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||| ||||||| ||       
T  34814107 tactccctccgtcccaatttaagtgaattttttgctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgttc 34814009  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || | || |||| ||| |||| || ||| ||||||| ||||||||||||| ||||||||    
T  34814008 ttgttaagtattagtgcatttatcattatcataaatgcaaagtagaatatattgaattg 34813950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 27932746 - 27932908
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttat----taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat 477  Q
    |||| ||||| ||||||||||||| |  | || |||||||||||| ||||    |||| |||||| |||||||||||| ||||||||||||  ||| | |    
T  27932746 tactccctccgtcccattttaactaagtcattggctcatttcacatttatatattaagtaaaagtatataagtgaaagagagagaaaaatgcgtttgagt 27932845  T
Q  478 gcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    | | || ||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  27932846 gtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattg 27932908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 4466072 - 4466235
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||| ||||| ||| || |||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||| ||| | | |||    
T  4466072 tactccctccgtcccaatttaattgagccatttgttcatttcacacttattaagaaaaa-tatattagtgaatgagagagaaaaatgggtttgagtacct 4466170  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| ||||||||||    
T  4466171 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtg 4466235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 26760461 - 26760381
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 468  Q
    |||| |||||||||||| || |||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26760461 ctccgtcccattttaaccgagcctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatg 26760381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 546
Target Start/End: Complemental strand, 16040237 - 16040104
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||||||||| ||||||||||||| | ||| ||| || | ||||||||||||||||||| || |||| | || |||||||  ||| ||||||| |    
T  16040237 tttgctcatttcacatttattaagaaaaa-tatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatc 16040139  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtg 546  Q
    ||||||  |||||||||||| ||| ||||||||||    
T  16040138 ataaatgtaaagtagaatatattgtattggaagtg 16040104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 443 - 540
Target Start/End: Complemental strand, 31798546 - 31798451
Alignment:
Q  443 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||  ||||||| |||||||| | |||| |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  31798546 gtataagtgaaag--agagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatatattgaattg 31798451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 540
Target Start/End: Original strand, 3718779 - 3718924
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||| | || ||| ||||||||||| ||||||| |||  || |||| |||    
T  3718779 tcccaatttaagtgaacattttgctcatttcacacttattaagaaaaa-tgtattaatg-aagagagagaaaaatagttttaagtgctcttgtcaagtat 3718876  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    | ||| |||| || ||| |||||||  |||||| ||||| ||||||||    
T  3718877 ttgtgcatttatcattatcataaatgtaaagtataatatattgaattg 3718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 545
Target Start/End: Original strand, 11425787 - 11425949
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||| ||||| ||| || ||||||||||||||  ||||||||||||| | ||| |||||| | ||||||||||| ||||| | || ||    
T  11425787 tactccctccgtcccaatttaattgagccatttgctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtct 11425885  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 545  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| |||||||||    
T  11425886 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagt 11425949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 516
Target Start/End: Complemental strand, 14090822 - 14090697
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 486  Q
    ||||| |||||||||||||||||   | |||||||||||||||||||||| ||| |||||||||||||  ||||||||||| |  || | || |||||||    
T  14090822 cctccatcccattttaactgaactcctcgctcatttcacacttattaagacaaaatgtataagtgaaa--gagagaaaaatag--ttgattgtctttatc 14090727  T
Q  487 aactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| ||| || |||| ||||||    
T  14090726 aactattggtgcattcttgtttatcataaa 14090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 543
Target Start/End: Original strand, 36232761 - 36232867
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    ||||||||||||  ||||| |||||||||||| |||| | || ||||  ||| |||||||| ||| ||||||| |||||||| |||||||||||| ||||    
T  36232761 aaaagtgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatataaagtagaatatattga 36232860  T
Q  537 attggaa 543  Q
    |||||||    
T  36232861 attggaa 36232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 2886403 - 2886323
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 462  Q
    |||||||| | ||||||||||| ||| || || |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  2886403 tacttccttcgtcccattttaattgagcccttggctcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 540
Target Start/End: Original strand, 10587533 - 10587656
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||  |||||| || | ||||||| || || |  ||| ||| ||| |||||    
T  10587533 ctcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaaaataattttaagtgtcattatcaatta-tgatacattcttcattatcataa 10587631  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || |||| |||||||| ||||||||    
T  10587632 atgcaaaatagaatatattgaattg 10587656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 539
Target Start/End: Original strand, 25983565 - 25983702
Alignment:
Q  396 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 495  Q
    ||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||    |||| ||||| ||||||| || | |||| || ||||||    
T  25983565 cattttaactgagtcttttgttcatt-cacacatattaagaaaaagtgtataagtgaa----agagtaaaattgttttaagtgtc-ttattaagtattgg 25983658  T
Q  496 tgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    || |||  | |||| ||||||| |||| ||||||||||||||||    
T  25983659 tgcattcatttttatcataaatgcaaaatagaatatgttgaatt 25983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 540
Target Start/End: Original strand, 27209921 - 27210042
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||| |||| ||||||||||| |||||||| |||||| |||||||||||| |||| | || ||||  ||| |||||||| ||| ||||||| |||||||    
T  27209921 cattttacacatattaagaaaa-gtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 27210019  T
Q  518 acaaagtagaatatgttgaattg 540  Q
      |||| ||||||| ||||||||    
T  27210020 gtaaaggagaatatattgaattg 27210042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 540
Target Start/End: Original strand, 705303 - 705424
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||| || |||||||||||| ||||||||| |||| || ||||||||| |||| |||| |||||| || |||| ||| ||| ||||||| |||| ||     
T  705303 atttcatacatattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatg 705402  T
Q  519 caaagtagaatatgttgaattg 540  Q
     |||||| ||||| ||||||||    
T  705403 taaagtataatatattgaattg 705424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 517
Target Start/End: Original strand, 36326122 - 36326257
Alignment:
Q  381 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    ||||| ||||| ||||| ||||||||| ||  |||  ||||||||||  |||||||||| |||||||| |||||| ||||||| ||||||||| | || |    
T  36326122 gtactccctccatcccagtttaactgagccagttgaacatttcacacagattaagaaaa-gtgtataaatgaaagagagagaacaatggttttgagtgtc 36326220  T
Q  481 tttatcaactattggtgtatttttctttagcataaat 517  Q
    ||| |||| |||||||| ||| || |||| |||||||    
T  36326221 tttgtcaaatattggtgcattcttgtttatcataaat 36326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 545
Target Start/End: Original strand, 2219366 - 2219528
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||||  |||| |||||| |||  |||||||||||| |||||| |||  ||||||| |||||| ||||||| |||| |||| | || ||    
T  2219366 tactccctccgtcccagattaattgaaccattttttcatttcacactgattaagtaaat-tgtataaatgaaagagagagaataatgattttgagtgtct 2219464  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 545  Q
    |||| ||  |||| || ||| ||||||| |||||||  |||||| ||||| |||||||||||||    
T  2219465 ttataaaagattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattggaagt 2219528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 536
Target Start/End: Original strand, 13409730 - 13409849
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||  |||||||||||| | ||||||||||||| |||||||||| ||||||   |  ||||| || ||||| || ||||||||||| ||||||    
T  13409730 tcatttcacatatattaagaaaaaatatataagtgaaaggaagagaaaaatagttttactagtatttattaagtattgatgcatttttctttatcataaa 13409829  T
Q  517 tacaaagtagaatatgttga 536  Q
    ||  | ||||||||| ||||    
T  13409830 tatgaggtagaatatattga 13409849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 517
Target Start/End: Original strand, 28706577 - 28706675
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    |||||||||| |||||| ||||| ||||||| ||||   ||||||||||||||||| | ||||||| |||| ||||| || ||||||||||| |||||||    
T  28706577 catttcacacatattaaaaaaaa-tgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaat 28706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 547
Target Start/End: Complemental strand, 32348390 - 32348244
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| |||  || | || ||||||| ||    
T  32348390 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtcta 32348292  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||| |  || || |||| |||||| |||||| ||||||||| |||||    
T  32348291 ttttccactatcacaaatgcaaagtggaatatattgaattgggagtga 32348244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 546
Target Start/End: Complemental strand, 14352705 - 14352593
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaa---tggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgt 533  Q
    |||||||||||| |||||  ||||||||||   ||||||| | || |||| |||| |||||||| ||| ||||||| | |||||| |||||||||||| |    
T  14352705 aaaagtgtataaatgaaatagagagaaaaaaaatggttttgagtgtctttgtcaagtattggtgcattcttctttatcgtaaatataaagtagaatatat 14352606  T
Q  534 tgaattggaagtg 546  Q
    |||||||| ||||    
T  14352605 tgaattgggagtg 14352593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 475
Target Start/End: Complemental strand, 4659585 - 4659529
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  4659585 catttcacacttattaagaaaaa-tgtattagtgaaggggagagaaaaatagttttaa 4659529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 37495963 - 37495861
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| |||||  ||||||||  || |||| |||| ||||||||| |||||||| ||| |||||||  ||||||  |||||||||||| ||||    
T  37495963 aaaagtgtataaatgaaaaagagagaaa--tgattttgaatgtctttatcaagtattggtgcattcttctttattataaatgtaaagtagaatatattga 37495866  T
Q  537 attgg 541  Q
    |||||    
T  37495865 attgg 37495861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 540
Target Start/End: Complemental strand, 27391507 - 27391380
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||| ||| ||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| |||  |||| || |||||||  ||||    ||| |    
T  27391507 tttgttcaattcacacttattacgaaaaa-tgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatttactattatc 27391409  T
Q  512 ataaatacaaagtagaatatgttgaattg 540  Q
    |||||| |||||| |||||| ||||||||    
T  27391408 ataaatgcaaagtggaatatattgaattg 27391380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 34332272 - 34332217
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 466  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  34332272 cttttgttcatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaa 34332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 540
Target Start/End: Complemental strand, 40061961 - 40061842
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    ||||||||||||||| | ||| |||||||| |||   |||||||||||| |||||||||   ||||||| ||||| |  ||||||| ||| ||||||| |    
T  40061961 tttcacacttattaaaagaaa-tgtataagcgaagaagagagaaaaatgattttaaatgttcttatcaagtattgttacatttttcattatcataaatgc 40061863  T
Q  520 aaagtagaatatgttgaattg 540  Q
    ||| |||||||| ||||||||    
T  40061862 aaattagaatatattgaattg 40061842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 40988506 - 40988450
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||    
T  40988506 tcatttcacacatattaagaaaaatagtataagtgaaagagagagacaaatggtttt 40988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 49494114 - 49494173
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  49494114 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaa 49494173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 49945092 - 49944981
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||||||||||||||| |||||||||||| ||||||| ||||   ||||||||||||||||||| |||  || | || |||| ||| ||| |||| || |    
T  49945092 tttgctcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatc 49944994  T
Q  512 ataaatacaaagt 524  Q
    |||||| ||||||    
T  49944993 ataaatgcaaagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 541
Target Start/End: Original strand, 50267391 - 50267514
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||| ||||||| |||  || | || |||||||| ||| | | ||| ||||||    
T  50267391 tcatttcacacgtattaagaaaaa-tgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccattatcataaa 50267489  T
Q  517 tacaaagtagaatatgttgaattgg 541  Q
    |  |||||  ||||| |||||||||    
T  50267490 tgtaaagtgaaatatattgaattgg 50267514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 51049643 - 51049540
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| | |||| ||||||||||||||||| |||| ||||||||| | || ||| ||| || |||| |||||||  |||||| ||||| ||||    
T  51049643 aaaagtgtataaataaaagagagagaaaaatggttttgaatgtctttatcaagt-ttagtgcattcttttttatcataaatgtaaagtataatatattga 51049545  T
Q  537 attgg 541  Q
    |||||    
T  51049544 attgg 51049540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 473
Target Start/End: Complemental strand, 7224563 - 7224500
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||||| ||||||||||| |||||| ||||| ||||||||||||||  || |||||||||||||    
T  7224563 cttttgttcatttcacacatattaaaaaaaaatgtataagtgaaagaaagcgaaaaatggtttt 7224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 383
Target Start/End: Complemental strand, 29051421 - 29051382
Alignment:
Q  344 aatattcaagtcctaaaacgtttaattgcccaaaaaagta 383  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  29051421 aatattcaagtcctaaaacgtttaagtgcccaaaaaagta 29051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 547
Target Start/End: Complemental strand, 29225942 - 29225779
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga-aaaatggttttaaatgcc 480  Q
    |||| ||||| |||||| |||||||| | ||||| | |||| ||||  |||||||||||||||| ||||||||| |||||| ||||| | ||| | || |    
T  29225942 tactccctccgtcccatgttaactgagcattttgttaattttacac--attaagaaaaagtgtacaagtgaaagagagagagaaaataggtttgagtgtc 29225845  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
     || |||| |||||||| |||  |  ||| ||||||| ||||||||||||| ||||||||| |||||    
T  29225844 -ttgtcaagtattggtgcattcattcttatcataaatgcaaagtagaatatattgaattgggagtga 29225779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 33149389 - 33149306
Alignment:
Q  457 gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||||||| ||| | || | |||| || |||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  33149389 gagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaattg 33149306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 531
Target Start/End: Complemental strand, 44580676 - 44580558
Alignment:
Q  415 gctcatttcacacttat--taag--aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    |||||||||||||||||  ||||  ||| || |||||||||||||  |||||||||||| ||  | || | |||||||||||| ||| |||||| ||||     
T  44580676 gctcatttcacacttatattaagtgaaagagagtataagtgaaag--agagaaaaatgggttagagtgaccttatcaactatttgtgcatttttttttat 44580579  T
Q  511 cataaatacaaagtagaatat 531  Q
    ||||||| |||||||||||||    
T  44580578 cataaatgcaaagtagaatat 44580558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 539
Target Start/End: Original strand, 45889212 - 45889322
Alignment:
Q  429 tattaagaaaaagtgtataagtgaaagg-gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtaga 527  Q
    |||||||| ||| ||||||| ||||||| ||||||||||||||||||| |||  || | |||||||||| |||| | | ||| ||||||| |||||| ||    
T  45889212 tattaagacaaa-tgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggtctattctccattatcataaatgcaaagtgga 45889310  T
Q  528 atatgttgaatt 539  Q
    |||| |||||||    
T  45889311 atatattgaatt 45889322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 50773301 - 50773399
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||   ||| ||| | |||  |||||||||||| ||||||| || | || ||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagagaa---tgggtttgagtgctcttatcaactattagtgtattcttttctatcataaa 50773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 540
Target Start/End: Complemental strand, 2886262 - 2886204
Alignment:
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||| | ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  2886262 ttatcaactattggagcattcttctttatcataaatgcaaagtagaatatattgaattg 2886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 539
Target Start/End: Original strand, 21304760 - 21304880
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||   ||||||||||| ||||||| |||||| |||| |||| || |||| | || |||| |||| ||||| || ||||||||||| ||||||    
T  21304760 tcatttcacataaattaagaaaaa-tgtataaatgaaagagagataaaattg-ttttgagtgtctttgtcaagtattgatgcatttttctttatcataaa 21304857  T
Q  517 tacaaagtagaatatgttgaatt 539  Q
    || |||||| ||||| |||||||    
T  21304858 tataaagtataatatattgaatt 21304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 531
Target Start/End: Complemental strand, 9590650 - 9590554
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaa--atggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 531  Q
    |||| ||||||| |||||| |||||| ||  |||||||||| ||||||| |||| |||| ||| ||| || |||| |||||||| ||||||||||||    
T  9590650 aaaattgtataaatgaaagagagagataataatggttttaagtgcctttgtcaagtatttgtgcattattatttatcataaatataaagtagaatat 9590554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 40019919 - 40019831
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatt 501  Q
    |||| |||||| ||||| ||||||||||| |||||||||||| | ||||||||||| ||||||| |||  || |||| |||| |||||||    
T  40019919 tttgttcattttacactgattaagaaaaa-tgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtatt 40019831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 32587921 - 32587798
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||||||||||  |||||| ||  ||| | || ||||| || ||||| | ||| |||||    
T  32587921 ctcatttcacacatattaagaaaaa-tgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataa 32587823  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || ||||||  ||||| ||||||||    
T  32587822 atgcaaagtgaaatatattgaattg 32587798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 36467146 - 36467205
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  36467146 gctcatttcacacgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaa 36467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 28839499 - 28839365
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||  |||||  |||||||| ||| ||||||| |||| | ||||||||||| |||||||||||  || | || ||||||| |||| | |  || |    
T  28839499 tttgctcaaatcacatatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatgctcttgttaagtattggtctattctccactatc 28839401  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  28839400 ataaatgcaaagtggaatatattgaattgggagtga 28839365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 474
Target Start/End: Original strand, 5040523 - 5040584
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||||||||||||| |||| ||| ||| ||||||| |||| | ||||||||||||||||||    
T  5040523 tttgctcatttcacacatatttagacaaa-tgtataaatgaatgagagagaaaaatggtttta 5040584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 5442495 - 5442438
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  5442495 tcatttcacacctattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaa 5442438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 478
Target Start/End: Complemental strand, 6787403 - 6787342
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||||||||||| |||||||||||| | |||||  ||||| ||||||||||| ||||||||||    
T  6787403 ctcatttcacacgtattaagaaaaa-tatataaacgaaagagagagaaaaatagttttaaatg 6787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 541
Target Start/End: Original strand, 12267605 - 12267707
Alignment:
Q  439 aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaat 538  Q
    ||||||||||   |||| || |||||||| ||||| | ||| ||| |||| |||||||  ||| ||||||| |||||||  |||||||||||| ||||||    
T  12267605 aagtgtataaagaaaagagaaagaaaaatagttttgagtgcatttttcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaat 12267704  T
Q  539 tgg 541  Q
    |||    
T  12267705 tgg 12267707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 25418802 - 25418743
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||||||||||| || |||||||||||| | |||||||||||  ||||||||||| |||||    
T  25418802 tttgctcatttcatacatattaagaaaaattatataagtgaaa--gagagaaaaatagtttt 25418743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 39420750 - 39420692
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaat 467  Q
    |||||| ||||||||| | |||||||||||| |||||||| |||||| |||||||||||    
T  39420750 cttttgttcatttcacgcatattaagaaaaaagtgtataaatgaaagagagagaaaaat 39420692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 2571514 - 2571469
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 465  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||||    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagagaaaa 2571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 454
Target Start/End: Original strand, 18186142 - 18186187
Alignment:
Q  409 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 454  Q
    |||||| |||||||||||| |||||||||||| ||||| |||||||    
T  18186142 ccttttactcatttcacacgtattaagaaaaattgtatgagtgaaa 18186187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 547
Target Start/End: Complemental strand, 27831997 - 27831872
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    ||||||||  ||||||||||| ||| || ||||||||  |||||||||| ||||||| |||| || |||| |||||||| |||   | ||| |||||||     
T  27831997 atttcacaaatattaagaaaa-gtgcatgagtgaaag--agagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatg 27831901  T
Q  519 caaagtagaatatgttgaattggaagtga 547  Q
    |||||| ||| || ||||||||| |||||    
T  27831900 caaagtggaagatattgaattgggagtga 27831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 479
Target Start/End: Complemental strand, 37525195 - 37525134
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    ||||||||||||  |||||||||||| ||||||| ||||  |||||||||||| |||||||||||    
T  37525195 gctcatttcacatgtattaagaaaaa-tgtataaatgaa--ggagagaaaaatagttttaaatgc 37525134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 467
Target Start/End: Original strand, 28424279 - 28424327
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 467  Q
    ||||||||| |||||||||||||||||||| | |||  |||||||||||    
T  28424279 atttcacacatattaagaaaaagtgtataaataaaatagagagaaaaat 28424327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 42309589 - 42309528
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||| ||||||||||  |||||||||||| | |||||||||||  ||| |||||||||||||||    
T  42309589 tttgttcatttcacatatattaagaaaaaatatataagtgaaa--gagtgaaaaatggttttaa 42309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 538
Target Start/End: Complemental strand, 46968189 - 46968113
Alignment:
Q  462 aaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaat 538  Q
    |||||||||||||||||   || | || |||| |||||||| || ||| |||||||| |||||| ||||||||||||    
T  46968189 aaaaatggttttaaatgttattgttaagtattagtgtatttatcattatcataaatataaagtaaaatatgttgaat 46968113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 543
Target Start/End: Original strand, 52830365 - 52830492
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||| |||||| ||||| ||||||| |||| | |||||||||||  |||| | ||| ||| | || |||||||| ||||| |  || ||||    
T  52830365 gctcatttcacacgtattaaaaaaaa-tgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcata 52830463  T
Q  515 aatacaaagtagaatatgttgaattggaa 543  Q
    |||  ||||| |||||| || ||||||||    
T  52830464 aatgtaaagtggaatatattcaattggaa 52830492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 28330985 - 28330821
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||     
T  28330985 tactccctccgtcccattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgccc 28330886  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||| ||| ||| ||||||||| ||||    
T  28330885 ttatcaactattggtgcattcttctttatcataaatgcaaagcagattatattgaattgggagtg 28330821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 393 - 541
Target Start/End: Complemental strand, 8759959 - 8759811
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    |||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||| ||| | | |  |||||||||||    
T  8759959 tcccattttaaccgaaccttttactcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaaaatgggtttcagttcacttatcaactat 8759860  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    || || ||||||||||| ||||||| ||||||||||||| |||||||||    
T  8759859 tgatgcatttttctttatcataaatgcaaagtagaatatattgaattgg 8759811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 20964204 - 20964368
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||   || ||    
T  20964204 tactccctccgtcccattttaactgagctcttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtct 20964303  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||||||||||||| ||| ||||||| | ||||| ||||||||||||| | ||||||||||||    
T  20964304 ttatcaactattggtgcattcttctttatcgtaaatgcaaagtagaatatatcgaattggaagtg 20964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 37315838 - 37316002
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    |||| ||||| |||| |||||| |||  |||| |||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||  |||||    
T  37315838 tactccctccgtcccgttttaattgagactttggctcatttaacacttattaagaaaaaagtg-ataagtgaaagagagagaaaaatggttttggatgcc 37315936  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
     |||| ||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  37315937 cttattaactattagtgcatttttctttatcataaatgcaaagtagaatatgttgaattgggagtg 37316002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 38320065 - 38319944
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| | |||| |||||||||||||||| ||| ||||||| |||||||     
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  519 caaagtagaatatgttgaattg 540  Q
    ||||||||||||| ||||||||    
T  38319965 caaagtagaatatattgaattg 38319944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 393 - 540
Target Start/End: Original strand, 32949775 - 32949923
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatgg-ttttaaatgcctttatcaacta 491  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| |||||  || |||||||||| |||| | || ||||||||||||    
T  32949775 tcccattttaactgagcctttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaaaatggtttttgagtgtctttatcaacta 32949874  T
Q  492 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||| ||||||||||| |||||||  |||||||||||| ||||||||    
T  32949875 ttggtgcatttttctttatcataaatgtaaagtagaatatattgaattg 32949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 416 - 546
Target Start/End: Complemental strand, 42132972 - 42132840
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat--gcctttatcaactattggtgtatttttctttagcat 513  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |  ||| |||| |||||||| || ||| ||||||| |||    
T  42132972 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttctttatcat 42132873  T
Q  514 aaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||| ||||||||||||| ||||||||||||||    
T  42132872 aaatgcaaagtagaatatattgaattggaagtg 42132840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 49218732 - 49218856
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | |||| |||||| ||||||||| | || |||||| ||||    
T  49218732 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggttagagtgcccttatcagctattggtgca-ttctctttatcata 49218830  T
Q  515 aatacaaagtagaatatgttgaattg 540  Q
    ||| ||||||| ||||| ||||||||    
T  49218831 aattcaaagtataatatattgaattg 49218856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 396 - 540
Target Start/End: Complemental strand, 53848823 - 53848679
Alignment:
Q  396 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 495  Q
    |||||||| ||| | ||| | |||||||||  |||||||||||||||||||||||| ||| |||| ||||||| |||| | |||| ||||||||||||||    
T  53848823 cattttaattgagcttttggttcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattgg 53848724  T
Q  496 tgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || ||| || |||| ||||||| ||||||||||||| ||||||||    
T  53848723 tgcattattatttatcataaatgcaaagtagaatatattgaattg 53848679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 540
Target Start/End: Original strand, 48400582 - 48400705
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||  ||||||||||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| ||||| |||||| ||||||| |||||    
T  48400582 ctcatttcacacagattaagaaaaa-tgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataa 48400680  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    ||  |||||||||||| ||||||||    
T  48400681 atgtaaagtagaatatattgaattg 48400705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 540
Target Start/End: Original strand, 22020462 - 22020584
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||| | | ||||| ||||||||| ||  ||||||| ||| |||||    
T  22020462 ctcatttcacacttattaagaaaaagtgtataaatgagagtgagag-aaaatggttttgagttcctttgtcaactatttgtacatttttc-ttatcataa 22020559  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || ||||||||||||| ||||||||    
T  22020560 atgcaaagtagaatatattgaattg 22020584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 543
Target Start/End: Original strand, 25902378 - 25902539
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||||||||| ||||||  ||||||| | |||| |||||||||||| ||||||||||||||||||||||||||| |  || ||||||||||| | ||  |    
T  25902378 tacttcctccgtcccataataactgagcattttcctcatttcacacatattaagaaaaagtgtataagtgaaagaggaagtaaaatggttttgagtgttt 25902477  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaa 543  Q
    || | || |||| ||| ||| ||||||   ||||||| ||||| |||||| |||||||||||    
T  25902478 ttgttaagtattagtgcattcttctttgttataaatataaagttgaatatattgaattggaa 25902539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 473
Target Start/End: Original strand, 5499349 - 5499440
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    |||| ||||| |||||||||||| || ||||||| |||||| |||| ||||||||||||||||||||||||||| || |||||||| |||||    
T  5499349 tactccctccgtcccattttaaccgagccttttgttcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaaaatagtttt 5499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 54217562 - 54217441
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagag--aaaaatggttttaaatgc 479  Q
    |||| ||||| |||||||||||| |  |||||  ||||||||| |||||||||||||||||||||||||||||| |||||  |||||||| ||| | | |    
T  54217562 tactccctccgtcccattttaacggggcctttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaaaatgggtttgagtac 54217463  T
Q  480 ctttatcaactattggtgtatt 501  Q
    | || |||||||||||||||||    
T  54217462 ccttgtcaactattggtgtatt 54217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 22872303 - 22872462
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg--c 479  Q
    |||| ||||| |||||  |||| ||| || |||||||||||||||| |||||||||||| ||||||||||||   ||||||||||||||||||| ||  |    
T  22872303 tactccctccgtcccaaattaagtgagccatttgctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggttttaagtgctc 22872401  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
     ||| |||| |||||||| ||| | | ||| ||||||| |||||| |||||| ||||||||    
T  22872402 gtttgtcaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaattg 22872462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 437 - 546
Target Start/End: Original strand, 42051627 - 42051736
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| |||||| || |||||||||||||| | || ||||| ||| |||||||| ||| ||||||| |||||||  ||||||||||||  |||    
T  42051627 aaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaatataatga 42051726  T
Q  537 attggaagtg 546  Q
    ||||||||||    
T  42051727 attggaagtg 42051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 18872585 - 18872656
Alignment:
Q  396 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 467  Q
    |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  18872585 cattttaagtgaacattttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaat 18872656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 540
Target Start/End: Original strand, 47277625 - 47277756
Alignment:
Q  409 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttt 508  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||  ||| ||||||  |||| |||||| || |||  |||| ||  ||||||||||    
T  47277625 ccttttgctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttcttt 47277724  T
Q  509 agcataaatacaaagtagaatatgttgaattg 540  Q
    | |||||||  |||||| ||||| ||||||||    
T  47277725 atcataaatgtaaagtaaaatatattgaattg 47277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 540
Target Start/End: Original strand, 4360343 - 4360482
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| || |||| ||||||||||| ||||||||||||  |||||| |||| |  |||||||||||||||||| ||| ||| | || |||||||| |    
T  4360343 ttaactgagccatttgttcatttcacacatattaagaaaaaa-gtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgca 4360441  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || | |  |||||||||| |||||| |||||| ||||||||    
T  4360442 ttctccactagcataaatgcaaagtggaatatattgaattg 4360482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 41594764 - 41594864
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||| |||  || ||||||| ||||||||||  |||| ||||||||||| |||||||||| ||||||||||||||||| | |||||    
T  41594764 tactccctccgtcccattataagcgagccttttgttcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaatggttttgagtgcct 41594863  T
Q  482 t 482  Q
    |    
T  41594864 t 41594864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 547
Target Start/End: Complemental strand, 33047664 - 33047518
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| || || ||||||||||||| |||||||||||| |||||||   ||   ||||||||||||||||||| ||| ||| | || |||||||  |    
T  33047664 ttaactgagccattagctcatttcacacctattaagaaaaa-tgtataaacaaagaagagagaaaaatggttttaagtgcttttgttaagtattggtaga 33047566  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    || | |  || |||||||||||||| |||||| |||||||||||||||    
T  33047565 ttctccactatcataaatacaaagtggaatatattgaattggaagtga 33047518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 540
Target Start/End: Original strand, 34790903 - 34791026
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||| ||||| ||||||||||| |||||||| |||||| |||||||||||| |||| | ||| |||||||| |||| ||| ||| ||||||| ||||||    
T  34790903 tcattgcacacatattaagaaaa-gtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaa 34791001  T
Q  517 --tacaaagtagaatatgttgaattg 540  Q
      || |||||||||||| ||||||||    
T  34791002 agta-aaagtagaatatattgaattg 34791026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 540
Target Start/End: Original strand, 39052835 - 39052975
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 498  Q
    ||||| |||||  ||| ||||||||||||  ||||||||||| ||||||| |||||| || | ||||| |  ||| | || ||||||||| ||||||||     
T  39052835 tttaattgaacaattttctcatttcacacagattaagaaaaa-tgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgc 39052933  T
Q  499 atttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||| ||||||| |||||||  |||||||||||| ||||||||    
T  39052934 attcttctttatcataaatgtaaagtagaatatattgaattg 39052975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 544
Target Start/End: Complemental strand, 28280029 - 28279866
Alignment:
Q  380 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    |||||||||||| ||||| ||||||||| ||  ||   |||||||||   ||||||||||| |||||||   |||| || ||| |||| ||||| | ||     
T  28280029 agtacttcctccgtcccagtttaactgagccaattttccatttcacagagattaagaaaaa-tgtataaagaaaagagaaagagaaatagttttgagtgt 28279931  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaag 544  Q
    |||| | || |||||||| ||||||||||| |||||||| |||||||||||| || |||||||||    
T  28279930 ctttgttaagtattggtgcatttttctttatcataaatataaagtagaatatatttaattggaag 28279866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 540
Target Start/End: Complemental strand, 41436633 - 41436514
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| ||||||||||| |||||||||||| || |||| |||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  41436633 tttcacacatattaagaaaa-gtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 41436535  T
Q  520 aaagtagaatatgttgaattg 540  Q
    |||||||||||| ||||||||    
T  41436534 aaagtagaatattttgaattg 41436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 464
Target Start/End: Complemental strand, 46958904 - 46958828
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 464  Q
    |||| |||| ||||||||||   ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||    
T  46958904 ctccgtccccttttaactgagtattttgttcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaa 46958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 8295201 - 8295127
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||| || ||||||||||||||||  ||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  8295201 ttaactgagccatttgctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaaaattgttttaa 8295127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 541
Target Start/End: Original strand, 29550680 - 29550802
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  ||||||||||| |||||||  ||||| ||||||||||| ||||| | ||||||| | || ||||| ||| |  ||||||| |||||||    
T  29550680 catttcacacagattaagaaaaa-tgtataaaggaaagagagagaaaaatagttttgagtgccttttttaagtattgatgtttcattctttatcataaat 29550778  T
Q  518 acaaagtagaatatgttgaattgg 541  Q
      |||||||||||| |||||||||    
T  29550779 gtaaagtagaatatattgaattgg 29550802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 41203897 - 41203763
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||| |||||||| |||||||||||| ||||||| |||| | || |||||||||||||| | |||  || | || ||||| || ||| |||  || |    
T  41203897 tttgctcgtttcacacgtattaagaaaaa-tgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactacc 41203799  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    ||||||||||||| |||||| |||||||| ||||||    
T  41203798 ataaatacaaagtggaatatattgaattgaaagtga 41203763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 454
Target Start/End: Original strand, 36045994 - 36046039
Alignment:
Q  409 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 454  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36045994 cctttggctcatttcacacttattaagaaaaagtgtataagagaaa 36046039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 540
Target Start/End: Complemental strand, 49448999 - 49448874
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||| ||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||| |||  || |||| |||| ||| ||| |   ||| |    
T  49448999 tttgttcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatc 49448903  T
Q  512 ataaatacaaagtagaatatgttgaattg 540  Q
    |||||| ||||||| ||||| ||||||||    
T  49448902 ataaatgcaaagtataatatattgaattg 49448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 13530017 - 13529961
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  13530017 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 13529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 547
Target Start/End: Original strand, 42024136 - 42024282
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| | |  || | || ||||||| ||    
T  42024136 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaactactcttgttaagtattggtcta 42024234  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    || | |  ||  |||||| |||||| |||||| |||||||||||||||    
T  42024235 ttctccactattataaatgcaaagtggaatatattgaattggaagtga 42024282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 540
Target Start/End: Original strand, 36047116 - 36047174
Alignment:
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  36047116 ttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattg 36047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 11583647 - 11583704
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 445  Q
    |||| |||||||||| |||| ||||| |||||||||||| ||||||||||||| ||||    
T  11583647 ctccgtcccattttagctgagcctttggctcatttcacatttattaagaaaaaatgta 11583704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 40020892 - 40021029
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaa-gtgta-taagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    |||| ||||||||||| |||||||||||| || || |||||||| | ||||||||||||||||| ||||  ||| |||| |||||||| ||||  | |||    
T  40020892 tttggtcatttcacacatattaagaaaaatgtatactaagtgaatgagagagaaaaatggttttgaatgtttttgtcaagtattggtgcatttaccatta 40020991  T
Q  510 gcataaatacaaagtagaatatgttgaattggaagtga 547  Q
     |||| || ||||  ||||||| || |||||| |||||    
T  40020992 tcatagatgcaaaaaagaatatattaaattgggagtga 40021029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 12619847 - 12619792
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 468  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| | ||||||||||    
T  12619847 tttgttcatttcatacttattaagaaaaa-tgtataagtgaaagagcgagaaaaatg 12619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 540
Target Start/End: Complemental strand, 17237203 - 17237076
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    |||||||||||||||| |||||||||||| | ||||| |||| | ||||||||||| ||||||| ||  ||| | || |||| ||| ||| ||   || |    
T  17237203 tttgctcatttcacacctattaagaaaaa-tatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattctttactatc 17237105  T
Q  512 ataaatacaaagtagaatatgttgaattg 540  Q
    |||||| |||||| |||||| ||||||||    
T  17237104 ataaatgcaaagtggaatatattgaattg 17237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 540
Target Start/End: Original strand, 38160099 - 38160226
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||||| | |  |||||||||||| ||||||| | || | ||||||||||| ||||||| || |||| |||| ||||| || ||| | | ||| |    
T  38160099 tttgctcattttatatatattaagaaaaa-tgtataaataaaggagagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatc 38160197  T
Q  512 ataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||  ||||| ||||||||    
T  38160198 ataaatacaaagtgaaatatattgaattg 38160226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 541
Target Start/End: Original strand, 10099749 - 10099800
Alignment:
Q  490 tattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    |||||||| ||||||||||| |||||||  |||||||||||| |||||||||    
T  10099749 tattggtgcatttttctttatcataaatttaaagtagaatatattgaattgg 10099800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 547
Target Start/End: Original strand, 35027420 - 35027578
Alignment:
Q  388 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 487  Q
    |||| ||| |||||||||||   ||||| | ||||||||| |||||| ||||||||||||| |||||  | |||||||||  ||||||||| | || |||    
T  35027420 ctccatcctattttaactgagtattttgtttatttcacacatattaaaaaaaagtgtataattgaaaaagggagaaaaataattttaaatgtc-ttgtca 35027518  T
Q  488 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    | |||||||| |||| |  ||| ||||||  ||||||  ||||| || ||||| ||||||    
T  35027519 aatattggtgcatttattattatcataaacgcaaagttaaatatattaaattgaaagtga 35027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 540
Target Start/End: Original strand, 35998088 - 35998191
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| |||||| ||  |||||||  |||| | || ||||||||| |||||||  ||| ||||||| |||||||  |||||| ||||| ||||    
T  35998088 aaaagtgtataaatgaaagcgaacgaaaaataattttgagtgtctttatcaagtattggtacattcttctttatcataaatgtaaagtaaaatatattga 35998187  T
Q  537 attg 540  Q
    ||||    
T  35998188 attg 35998191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 41710091 - 41710225
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||  |||||| |||||||| ||| ||||||| ||||   |||| |||||||||||||| |||  || | || ||||||| |||||| |  || |    
T  41710091 tttgctcaaatcacacatattaagacaaa-tgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtctattttccactatc 41710189  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  41710190 ataaatgcaaagtggaatatattgaattgggagtga 41710225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 455
Target Start/End: Complemental strand, 1920884 - 1920846
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  1920884 tcatttcacacatattaagaaaaaatgtataagtgaaag 1920846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 545
Target Start/End: Complemental strand, 25149604 - 25149479
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttc-tttagcataaata 518  Q
    ||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| | || |||||||| |||  || |||| |||||||     
T  25149604 tttcacacagattaagaaaa-gtgtataacgaaaagagagagaaaaatagttttgagtgccttttttaagtattggtgcattcctcttttatcataaatg 25149506  T
Q  519 caaagtagaatatgttgaattggaagt 545  Q
     ||||| |||||| |||||||||||||    
T  25149505 taaagtggaatatattgaattggaagt 25149479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 540
Target Start/End: Original strand, 54729434 - 54729558
Alignment:
Q  419 atttcacacttattaagaaa---aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||| ||||||||||   || ||||||| |||||| ||||||||||| ||||||| ||  ||| | || |||| ||||||| | |  || |||||    
T  54729434 atttcacacatattaagaaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataa 54729533  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || |||||| |||||| ||||||||    
T  54729534 atgcaaagtggaatatattgaattg 54729558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 537
Target Start/End: Complemental strand, 13719912 - 13719811
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 535  Q
    ||||||||||||| |||||| || |||||||||| ||| | || |||| | || || || |||||| ||||||| |||||||  |||||| ||||| |||    
T  13719912 aaaaagtgtataaatgaaagagaaagaaaaatgggtttgagtgtctttgttaagtaatgatgtattattctttatcataaatgtaaagtataatatattg 13719813  T
Q  536 aa 537  Q
    ||    
T  13719812 aa 13719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 539
Target Start/End: Complemental strand, 49306718 - 49306621
Alignment:
Q  442 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    ||||||| |||||| ||||||||||||||||||| |||  || | || ||||||| |||| | |  || ||||||| |||||| |||||| |||||||    
T  49306718 tgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaagtggaatatattgaatt 49306621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 543
Target Start/End: Complemental strand, 49401798 - 49401686
Alignment:
Q  430 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaat 529  Q
    ||||||||||| |||||||   |||| ||||||||||| ||||| |||| | || |||| ||||| |  ||| |||||||  ||||||  ||||||||||    
T  49401798 attaagaaaaa-tgtataaagtaaagagagagaaaaatagttttgaatgtccttttcaagtattgatacattgttctttattataaatgtaaagtagaat 49401700  T
Q  530 atgttgaattggaa 543  Q
    || |||||||||||    
T  49401699 atattgaattggaa 49401686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 475
Target Start/End: Complemental strand, 28974459 - 28974404
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||| |||||||| ||| ||||||| ||||||||||| |||| |||||||||    
T  28974459 atttcacacatattaagacaaa-tgtataaatgaaagggagataaaagtggttttaa 28974404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 38838787 - 38838740
Alignment:
Q  410 cttttgctcatttcacacttat--taagaaaaagtgtataagtgaaag 455  Q
    |||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  38838787 cttttgctcatttcacacatatattaagaaaaagtgtctaagtgaaag 38838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 52676977 - 52677040
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||| | ||||||||||||| ||||| |||||| |  ||||||||||| ||||||    
T  52676977 ttttgctcatttcatatttattaagaaaaa-tgtattagtgaatgaaagagaaaaatgattttaa 52677040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 13222259 - 13222095
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||||||||||| || || ||  || |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| | ||||     
T  13222259 tactccctccgtcccattttaaccgagccattgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgccc 13222160  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  13222159 ttatcaactattggtgtattcttctttatcataaatgcaaagtaaaatatattgaattggaagtg 13222095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 382 - 545
Target Start/End: Complemental strand, 314618 - 314455
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||     
T  314618 tactccctccgtcccattttaactgagcgattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgccc 314519  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 545  Q
    ||||||||||||| || ||| ||||||| ||||||| ||||||||||||| |||||||| ||||    
T  314518 ttatcaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgaaagt 314455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 540
Target Start/End: Original strand, 6972462 - 6972614
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 486  Q
    ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| | |||| |||||    
T  6972462 cctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagag-aaaatggttttgagtgcccttatc 6972560  T
Q  487 aactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  6972561 aactatttgtgcattcttctttatcataaatgcaaagtagaatatattgaattg 6972614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 4282934 - 4283093
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa-agtgtataagtgaaagggagagaaaaatggttttaaatgcc 480  Q
    |||||||||| || ||||||||||||  ||||||||||||| ||  |||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  4282934 tacttcctccgtctcattttaactgagtcttttgctcattttacgtttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcc 4283033  T
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
     ||||||| |||||||| |||  |||||| |||||||  ||| |||||||| ||||||||    
T  4283034 cttatcaagtattggtgcattcctctttatcataaatgtaaaatagaatatattgaattg 4283093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 393 - 531
Target Start/End: Original strand, 928466 - 928603
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||  ||||||||||||| || | |||||||| ||| | ||||||||||||||||    
T  928466 tcccattttaactgagcccttggctcatttcacacttattaagaaaaaacgtataagtgaaagaga-aaaaaaatgggtttgagtgcctttatcaactat 928564  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatat 531  Q
    ||||| ||| ||||||| ||||||| |||| ||||||||    
T  928565 tggtgcattcttctttatcataaatgcaaaatagaatat 928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 2048448 - 2048325
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | | |||  |||||||||||||||| ||| || |||| |||||    
T  2048448 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatcataa 2048350  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || ||||||||||||| ||||||||    
T  2048349 atgcaaagtagaatatattgaattg 2048325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 547
Target Start/End: Original strand, 43950399 - 43950529
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||  ||| | || ||||| |||||||| | ||| |||||    
T  43950399 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccattaacataa 43950497  T
Q  516 atacaaagtagaatatgttgaattggaagtga 547  Q
    || ||||||||||||| |||||||| ||||||    
T  43950498 atgcaaagtagaatatattgaattgaaagtga 43950529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 541
Target Start/End: Complemental strand, 9725034 - 9724910
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    |||||||||||| ||||||||||| |||||||| |||||| |||||| ||||| |||| | ||| |||||||| |||||||| ||| ||||||| |||||    
T  9725034 ctcatttcacacatattaagaaaa-gtgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataa 9724936  T
Q  516 atacaaagtagaatatgttgaattgg 541  Q
    ||  |||||||||||| |||||||||    
T  9724935 atgtaaagtagaatatattgaattgg 9724910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 375 - 546
Target Start/End: Original strand, 37528981 - 37529151
Alignment:
Q  375 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||| |||| ||||| ||||| |||||||||  | |||| |||||||||||||||||| ||||| | ||| ||| || |  ||||||||||||||||     
T  37528981 aaaaaattactccctccgtcccaatttaactgagtcatttgttcatttcacacttattaaaaaaaa-tatattagtaaaggatagagaaaaatggttttg 37529079  T
Q  475 aatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    | || |||| | || ||||||| |||||||||||| |||||||  |||||||||||  ||||||||||||||    
T  37529080 agtgtctttgttaagtattggtctatttttctttatcataaatgtaaagtagaataaattgaattggaagtg 37529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 546
Target Start/End: Complemental strand, 2427521 - 2427387
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||||||| | ||||||||||||||||||||| ||| |   |||||||||||| ||| |||||| |||| || |||||| | ||| ||||||  |    
T  2427521 tttgctcatttcatatttattaagaaaaagtgtataactgacatatagagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtc 2427422  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||| ||||||||||||| ||||||||| ||||    
T  2427421 ataaatgcaaagtagaatatattgaattgggagtg 2427387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 411 - 546
Target Start/End: Original strand, 38872867 - 38873000
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| | || | ||||||||||||| || |||  ||||||     
T  38872867 ttttgctcatttcatacttattaagaaaaagtgtaaaagtggaagagaaaaaaaaatggttttgagtgtccttatcaactattgatgcattcctctttat 38872966  T
Q  511 cataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||||| |||||  ||||| ||||||||| ||||    
T  38872967 cataaatataaagt--aatatattgaattgggagtg 38873000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 540
Target Start/End: Complemental strand, 7213654 - 7213508
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||| ||||| ||| || ||| ||||||||||||  ||||||||||| ||||||| |||||  |||||||||||| |||| | |||||||||||| |||    
T  7213654 tcccagtttaattgagccattttctcatttcacacagattaagaaaaa-tgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatat 7213556  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||| ||| |||||||  ||||||  ||||| |||||| ||||||||    
T  7213555 tggtgcattcttctttattataaatgtaaagtggaatatattgaattg 7213508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 547
Target Start/End: Original strand, 43427005 - 43427167
Alignment:
Q  384 cttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgccttt 483  Q
    |||||||| ||||||||||||||| |  ||  ||||||||| |||| |||||||||||||||||| |||||  ||||||||||| | ||| | |||| ||    
T  43427005 cttcctccgtcccattttaactgagctattgactcatttcatactttttaagaaaaagtgtataaatgaaa--gagagaaaaataggtttgagtgccctt 43427102  T
Q  484 at-caactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
     |  ||||||| ||| ||| ||||||| ||||||| |||| |||||||| ||||||||| |||||    
T  43427103 gtgaaactattagtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtga 43427167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 24356265 - 24356143
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||| | ||||| | ||||||| |||| ||||| || ||| ||||||| |||||||    
T  24356265 catttcacacagattaagaaaa-gtgtataaaggaaagagagagaaaactagttttgagtgcctttttcaagtattgatgcattcttctttatcataaat 24356167  T
Q  518 acaaagtagaatatgttgaattgg 541  Q
      ||||||||||||||||||||||    
T  24356166 gtaaagtagaatatgttgaattgg 24356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 5426031 - 5425969
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 462  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5426031 ttaactgatccttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagaga 5425969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 540
Target Start/End: Original strand, 10069530 - 10069659
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||| |||| ||||||| |||||| | | ||| |||| |||| ||| ||||  | |||    
T  10069530 cttttgctcatttcacactcattaagaaaaa-tatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttaccatta 10069628  T
Q  510 gcataaatacaaagtagaatatgttgaattg 540  Q
     ||||||| |||||| |||||| ||||||||    
T  10069629 tcataaatgcaaagtcgaatatattgaattg 10069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 528
Target Start/End: Original strand, 38280148 - 38280258
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||||||| |||||||  ||||  ||||||||||||||||| | ||||||| | || |||||||| ||| ||||||| ||||||    
T  38280148 tcatttcacacatattaagaaaaa-tgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaa 38280246  T
Q  517 tacaaagtagaa 528  Q
    |  |||||||||    
T  38280247 tgtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 541
Target Start/End: Original strand, 18181168 - 18181288
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    ||||||||  |||||||||| |||||||||||| || ||||||||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  18181168 tttcacacagattaagaaaa-gtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  520 aaagtagaatatgttgaattgg 541  Q
    |||||||||||| |||||||||    
T  18181267 aaagtagaatattttgaattgg 18181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 539
Target Start/End: Complemental strand, 31348632 - 31348545
Alignment:
Q  452 aaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    |||| ||||||||||||| ||| | |||| |||||||||||||||| ||| || |||| ||||||| || |||||||||| |||||||    
T  31348632 aaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatatattgaatt 31348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 541
Target Start/End: Original strand, 39166606 - 39166771
Alignment:
Q  379 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa---gtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||  |||| ||||||||||| ||| | |||||||||||||||| ||||||| |||||    | |||||||||||| || ||||||||| |||| |    
T  39166606 aagtactcgctccgtcccattttaattgagctttttgctcatttcacatttattaaaaaaaatatatatataagtgaaagagaaagaaaaatgattttga 39166705  T
Q  476 atgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    ||||| |||| || |||  ||  ||| || |||| |||||||  |||||| ||||| |||||||||    
T  39166706 atgcccttattaattatgtgtacattcttttttatcataaatgtaaagtataatatattgaattgg 39166771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 479
Target Start/End: Original strand, 45464162 - 45464228
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    |||||||||||||||| |||||||||||| |||||||||||| | |||| ||||||| ||||||||||    
T  45464162 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagaaaaaaatgattttaaatgc 45464228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 444 - 546
Target Start/End: Original strand, 1908472 - 1908574
Alignment:
Q  444 tataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaa 543  Q
    ||||| |||||  ||||||||||||||||| | || ||||  ||| |||| ||| ||| ||||||| |||||||  |||||||||||| |||||||||||    
T  1908472 tataaatgaaatagagagaaaaatggttttgagtgtcttttgcaagtattagtgcattcttctttatcataaatgtaaagtagaatatattgaattggaa 1908571  T
Q  544 gtg 546  Q
    |||    
T  1908572 gtg 1908574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 18460642 - 18460521
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| |||||||| |||||| || ||||||||| |||| | || |||| |||| |||||||  ||| ||||||  |||||||    
T  18460642 catttcacacagattaagaaaa-gtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaat 18460544  T
Q  518 acaaagtagaatatgttgaattg 540  Q
      |||||||||||| ||||||||    
T  18460543 gtaaagtagaatatattgaattg 18460521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 36748302 - 36748181
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    |||||||||| ||||||||||| ||||||||  ||||  ||||||||||| ||||| | | ||||| |||| ||||||||  || ||||||| |||||||    
T  36748302 catttcacacatattaagaaaa-gtgtataaaagaaatagagagaaaaatagttttgagttcctttttcaagtattggtgcgttattctttatcataaat 36748204  T
Q  518 acaaagtagaatatgttgaattg 540  Q
      |||||| ||||| ||||||||    
T  36748203 ttaaagtaaaatatattgaattg 36748181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 546
Target Start/End: Complemental strand, 3200049 - 3199925
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||| | ||||||||||||  ||||||| |||||| ||||||||||||||||| | || | || | ||||||| ||| ||||   |||| |||||||     
T  3200049 atttcatatttattaagaaaagatgtataaatgaaagagagagaaaaatggttttgagtgtcattgttaactatttgtgcattt---tttatcataaatg 3199953  T
Q  519 caaagtagaatatgttgaattggaagtg 546  Q
    ||||||| ||||| ||||||||| ||||    
T  3199952 caaagtataatatattgaattgggagtg 3199925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 14384057 - 14384133
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaa 488  Q
    ||||| |||||||| || |||||||||||| | ||||| |||||| ||||||||||||||||| |||| |||||||||    
T  14384057 ttttgttcatttcatacatattaagaaaaaatatataaatgaaagagagagaaaaatggttttgaatg-ctttatcaa 14384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 540
Target Start/End: Complemental strand, 31592703 - 31592583
Alignment:
Q  420 tttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||||| |||||| ||||| ||||||||||||||| ||||||||||| ||||  | || | || |||| ||||| || ||| ||  ||| ||||||||    
T  31592703 tttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagtttcgagtgtc-ttgtcaagtattgctgcattctttcttatcataaata 31592605  T
Q  519 caaagtagaatatgttgaattg 540  Q
    ||||||||||||| ||||||||    
T  31592604 caaagtagaatatattgaattg 31592583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 540
Target Start/End: Complemental strand, 9472594 - 9472455
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 499  Q
    |||||||||||  |||  |||||||||| |||||||||||| ||||||| |||||| || |||| ||||||||  | || |||| |||| ||||| |  |    
T  9472594 ttaactgaaccagttgaccatttcacacatattaagaaaaa-tgtataaatgaaagagatagaacaatggtttagagtgtctttgtcaagtattgataca 9472496  T
Q  500 tttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || ||||||| |||||||  | |||||||||| ||||||||    
T  9472495 ttcttctttatcataaatgtatagtagaatatattgaattg 9472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 32556330 - 32556270
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||    
T  32556330 tttgttcatttcacacatattaagaaaa-gtgtataagtgaaa--gagagaaaaatggttttaa 32556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 547
Target Start/End: Complemental strand, 2756829 - 2756700
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    |||||||||||||||||||||||| ||||| | ||||   |||||||||||  |||||| |||  || |||| |||| ||| ||||  | ||| ||||||    
T  2756829 tcatttcacacttattaagaaaaa-tgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatttaccattatcataaa 2756731  T
Q  517 tacaaagtagaatatgttgaattggaagtga 547  Q
    |  |||||||||||| || ||||||||||||    
T  2756730 tgtaaagtagaatatattaaattggaagtga 2756700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 6213778 - 6213859
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||| ||||| |||  ||||||||||||||||||||||||||||||| || || |||||| |  ||||||||||| ||||||    
T  6213778 tcccaatttaagtgagtcttttgctcatttcacacttattaagaaaaa-tgaattagtgaatgaaagagaaaaatgattttaa 6213859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 517
Target Start/End: Complemental strand, 14890470 - 14890373
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| || ||||||||| ||||||| ||||||  ||| |||||||||||| | || ||||||||| |||| ||| ||| ||||||| ||||||    
T  14890470 tcatttcacacatactaagaaaaa-tgtataaatgaaag--agataaaaatggttttgagtgtctttatcaagtattagtgcattcttctttatcataaa 14890374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 883100 - 883159
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 472  Q
    |||| ||||||||||| | ||||||||| ||||||||||||||| || |||||||||||||    
T  883100 tttgttcatttcacacattttaagaaaa-gtgtataagtgaaagagaaagaaaaatggttt 883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 8550593 - 8550651
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||  ||| ||||||| |||||||||||||| ||||||||| |||||||||    
T  8550593 ctcatttcacacacatttagaaaaa-tgtataagtgaaagagagagaaaagtggttttaa 8550651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 528
Target Start/End: Original strand, 12949908 - 12950026
Alignment:
Q  409 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttt 508  Q
    ||||||| ||||||||||  ||||| |||||| |||||||||||||| |||| ||||||  |||| | || | || |||| |||||||| |||  | |||    
T  12949908 ccttttgttcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaataattttgagtgtc-ttgtcaagtattggtgaattccttttt 12950006  T
Q  509 agcataaatacaaagtagaa 528  Q
    | ||||||| ||||||||||    
T  12950007 atcataaatgcaaagtagaa 12950026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 28527124 - 28527062
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | || | ||||||||||||||    
T  28527124 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagaaaaaaaaatggttttaa 28527062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Complemental strand, 40965170 - 40965112
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  40965170 ctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaa 40965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 44737026 - 44736964
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||||| |||||||||||| ||||||||| || | |||| ||||||| ||||||    
T  44737026 tttgctcatttcacacatattaagaaaaa-tgtataagttaatgagagataaaaatgattttaa 44736964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 531
Target Start/End: Complemental strand, 3123801 - 3123688
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||||||| ||||||| ||||   |||||||||||  |||||| ||| || || || |||||||| ||| |||  || ||||||    
T  3123801 tcatttcacacatattaagaaaaa-tgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattcttcactatcataaa 3123703  T
Q  517 tacaaagtagaatat 531  Q
    |||||| | ||||||    
T  3123702 tacaaaatggaatat 3123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 465
Target Start/End: Original strand, 5007194 - 5007240
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 465  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  5007194 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 5007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 503
Target Start/End: Original strand, 43077678 - 43077763
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttt 503  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||   || | ||||||||||| |||||    
T  43077678 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcatttt 43077763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 44024875 - 44024825
Alignment:
Q  405 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    ||||||||||| ||| ||||||| |||||||||||| | ||||||||||||    
T  44024875 tgaaccttttgttcacttcacacgtattaagaaaaaatctataagtgaaag 44024825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 540
Target Start/End: Original strand, 44424241 - 44424337
Alignment:
Q  442 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||| ||||| ||||||||||| |||| | || |||| ||||| || ||||||  ||| ||||||| |||||| |||||| ||||||||    
T  44424241 tgtataagtgaaagagagag-aaaatggttttgaatgtc-ttgtcaagtattgatgcattttttattatcataaatgcaaagttgaatatattgaattg 44424337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 435026 - 435087
Alignment:
Q  415 gctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| |||| |||||| |||||||    
T  435026 gctcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaa 435087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 478
Target Start/End: Original strand, 10394202 - 10394295
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||||||||| |||||  ||||||||||  |||| |||||||||||  ||||||||||| |||||||  ||| | |||||||||||  |||||||||    
T  10394202 tacttcctccatcccaaattaactgaactatttgttcatttcacac--attaagaaaaa-tgtataaaagaaggagagagaaaaataattttaaatg 10394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 14306031 - 14306072
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaa 440  Q
    ||||| ||||| |||||||||||||||| |||||||||||||    
T  14306031 tttaagtgaacattttgctcatttcacatttattaagaaaaa 14306072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 39159780 - 39159717
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39159780 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39159717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Original strand, 39209414 - 39209477
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39209414 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 518
Target Start/End: Complemental strand, 39807355 - 39807268
Alignment:
Q  430 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    ||||||||||| ||||||| | |||| || |||||||||||||| | ||||||| | || |||||||| ||| |||||||  |||||||    
T  39807355 attaagaaaaa-tgtataaatcaaagagaaagaaaaatggttttgagtgcctttgtgaagtattggtgcattcttctttataataaata 39807268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 393 - 546
Target Start/End: Original strand, 15371791 - 15371943
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||||||||||| || || | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | || | |||||||||||    
T  15371791 tcccattttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtc-ttatcaactat 15371889  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    | ||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  15371890 tagtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 15371943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 15325337 - 15325180
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| |  ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||     
T  15325337 tactccctccgtcccattttaactgagctcttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgcc- 15325239  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||||||||||| || ||||||| | ||||| ||||||||||||| ||| ||||    
T  15325238 ttatcaactattggtgtgttcttctttatcgtaaatgcaaagtagaatatattggattg 15325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 393 - 540
Target Start/End: Original strand, 15321153 - 15321299
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||||||||||| || || ||| |||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| | || | |||| ||||||    
T  15321153 tcccattttaactgatcccttggcttatttcacaattattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtgtc-ttataaactat 15321251  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||  || ||||||| ||||||| ||||||||||||| ||||||||    
T  15321252 tggtgcgttcttctttatcataaatgcaaagtagaatatattgaattg 15321299  T

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Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 540
Target Start/End: Complemental strand, 15355752 - 15355608
Alignment:
Q  395 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 494  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||||||||||||    
T  15355752 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 15355654  T
Q  495 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||| ||| ||||||| ||||||| |||||||||||||  |||||||    
T  15355653 gtgcattcttctttatcataaatccaaagtagaatataatgaattg 15355608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 34803621 - 34803781
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||| ||| || || ||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||| | || ||    
T  34803621 tactccctccgtcccattttaattgagcccttagctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtct 34803720  T
Q  482 ttatcaactattggtgtatttttctt--tagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||||||| || |||  ||||  || ||||||| |||| || ||||| ||||||||    
T  34803721 ttatcaactattgatgcattcctctttatatcataaatgcaaaataaaatatattgaattg 34803781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 33921386 - 33921544
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| || |||||||||||| |||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||  |    
T  33921386 tactccctccgtcccattttaactgagccatttgctcatttcgcacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtgt 33921484  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| |||||||||    
T  33921485 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgaattgg 33921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 393 - 540
Target Start/End: Original strand, 15351311 - 15351457
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||||||| |||| | ||  ||||||||||| ||||||||||||| |||||||||||| | ||||||||| || |||| | |||| |||||||||||    
T  15351311 tcccattttaattgaatccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgcc-ttatcaactat 15351409  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || ||  || ||||||| ||||||| ||| ||||||||| ||||||||    
T  15351410 tgatgcgttcttctttatcataaatgcaaggtagaatatattgaattg 15351457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 538
Target Start/End: Original strand, 3166078 - 3166180
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 535  Q
    ||||||||||||| |||||| ||||||||||| ||||| | || ||||| ||| ||||| |||||||||||||| |||||||  |||||||||||| |||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagtagaatatattg 3166177  T
Q  536 aat 538  Q
    |||    
T  3166178 aat 3166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 547
Target Start/End: Original strand, 31075854 - 31076005
Alignment:
Q  395 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 494  Q
    ||||||||| ||| | ||||| ||||||||| |  ||||||||||| |||| ||||||||| |||||||||||||| || | || |||| ||||||||||    
T  31075854 ccattttaagtgatcattttgttcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaatggtattgagtgtcttt-tcaactattg 31075952  T
Q  495 gtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 547  Q
    ||| |||  |  ||| |||||||||||| || ||||| ||||||||| |||||    
T  31075953 gtgcattccttcttatcataaatacaaaatataatatattgaattgggagtga 31076005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 539
Target Start/End: Original strand, 3874020 - 3874123
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 535  Q
    ||||||||||||| |||||| |||| ||||||| |||| | || |||| |||| |||||||| ||| ||||||| |||||||  ||||| |||||| |||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatatattg 3874119  T
Q  536 aatt 539  Q
    ||||    
T  3874120 aatt 3874123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 546
Target Start/End: Complemental strand, 4553059 - 4552936
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagt-gaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcat 513  Q
    |||||||||||||||||||||||||  |||||||||  |||| ||||||||||||||||| | |         ||||||||||| ||| ||||||| |||    
T  4553059 gctcatttcacacttattaagaaaatatgtataagtaaaaagagagagaaaaatggttttgagt---------aactattggtgcattcttctttatcat 4552969  T
Q  514 aaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||| |||| |||||||| || |||||| ||||    
T  4552968 aaatgcaaattagaatatattaaattgggagtg 4552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 16126402 - 16126318
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 466  Q
    |||| ||||| || ||||||||||||   ||||| ||||||||||| ||||||||||||||||| ||| ||||| |||| |||||    
T  16126402 tactccctccgtctcattttaactgactattttgttcatttcacacgtattaagaaaaagtgtaaaagcgaaagagagaaaaaaa 16126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 545
Target Start/End: Original strand, 3604552 - 3604679
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||| ||| ||||||| | |||| ||||||||||||||||||| | |  || | || |||||||| ||| | | |||   ||||    
T  3604552 tcatttcacacatattaagacaaa-tgtataaataaaagagagagaaaaatggttttaagttctcttgttaagtattggtgcattctccattattgtaaa 3604650  T
Q  517 tacaaagtagaatatgttgaattggaagt 545  Q
    | |||||| |||||| |||||||||||||    
T  3604651 tgcaaagtggaatatattgaattggaagt 3604679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 475
Target Start/End: Complemental strand, 15081580 - 15081521
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  15081580 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggtgagagaaaaatagttttaa 15081521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 479
Target Start/End: Complemental strand, 33109530 - 33109467
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    ||||||||||||| |||||||||||| ||||||  |||| | ||||||||||| |||||||||||    
T  33109530 gctcatttcacacgtattaagaaaaa-tgtatagatgaatgagagagaaaaatagttttaaatgc 33109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 34265403 - 34265359
Alignment:
Q  97 cattttaaaattttgaatagctttatcactatttcaactatgcaa 141  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||    
T  34265403 cattttaaaattttgaattgcttcatccctatttcaactatgcaa 34265359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 518
Target Start/End: Complemental strand, 20027724 - 20027637
Alignment:
Q  431 ttaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||||||||||||||||||||||  | || |||||| |||| | || |||| | || |||||||| ||| ||||||| ||||||||    
T  20027724 ttaagaaaaagtgtataagtgaaagaaatagcaaaatgattttgagtgtctttgttaagtattggtgcattcttctttatcataaata 20027637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 7739465 - 7739530
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||||||||||||||  || ||||||||| |||||||||||||| || |||||||| |||| |||||    
T  7739465 tttgctcatttcacatgtaataagaaaaa-tgtataagtgaaagagatagaaaaatagtttaaaatg 7739530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 473
Target Start/End: Complemental strand, 20384030 - 20383944
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||| ||||||| | | ||||| ||||| || ||| |||| ||||||||||| || | |||||||||| |||| ||||||||||||    
T  20384030 cctccatcccattattagtgaactttttgttcctttaacacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggtttt 20383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 545
Target Start/End: Complemental strand, 31265932 - 31265807
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    ||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||| |||  || | || |||||||| ||| | |  || |||||||     
T  31265932 atttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattctccactatcataaatg 31265834  T
Q  519 caaagtagaatatgttgaattggaagt 545  Q
     ||||| |||||| |||||||||||||    
T  31265833 taaagtggaatatattgaattggaagt 31265807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 546
Target Start/End: Original strand, 33017958 - 33018024
Alignment:
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||| |||| |||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  33017958 ctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 33018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 9354374 - 9354505
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 498  Q
    |||||||||  | |||||| |||| ||| || |||||||||| | ||| |||||| | ||||||||||||||||| | || |||| | || |||||||      
T  9354374 tttaactgagtcatttgcttattttacattttttaagaaaaa-tatattagtgaatgagagagaaaaatggttttgagtgtctttgttaaatattggtcc 9354472  T
Q  499 atttttctttagcataaatacaaagtagaatat 531  Q
    ||| ||||||| |||||||  | ||||||||||    
T  9354473 attcttctttatcataaatgtagagtagaatat 9354505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 531
Target Start/End: Complemental strand, 34703792 - 34703643
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaa--tgc 479  Q
    |||| ||||| ||||| ||||| ||| | ||||| ||||||||||| |||||||||||| |||||  ||||| | || ||| |||||||||||||  | |    
T  34703792 tactccctccgtcccaatttaagtgagcattttgttcatttcacac-tattaagaaaaa-tgtattggtgaaggagatagagaaatggttttaaattttc 34703695  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 531  Q
     ||| |||| |||||||| ||||  | ||| || |||| |||||||||||||    
T  34703694 ttttgtcaattattggtgcatttaccattatcacaaatgcaaagtagaatat 34703643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 8e-38; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 32776174 - 32776010
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| | ||||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| | |||||    
T  32776174 tactccctccgttccattataaatgagccttttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcct 32776075  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || | || |||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  32776074 ttgttaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 32776010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 29996945 - 29997104
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||||||||| ||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |     
T  29996945 tacttcctccgtcctattttaactgagcctttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtcc 29997044  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    || | || |||||||| ||| ||||||| ||||||| ||||||| ||||| |||| ||||    
T  29997045 ttgttaattattggtgcattcttctttatcataaatgcaaagtataatatattgagttgg 29997104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 386 - 536
Target Start/End: Complemental strand, 47238404 - 47238254
Alignment:
Q  386 tcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttat 485  Q
    |||||| | |||||||||| ||  | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||||    
T  47238404 tcctccgttccattttaaccgagtcattggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttat 47238305  T
Q  486 caactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||| ||||||| ||| ||||||| ||||||| ||||||| || |||||||    
T  47238304 caacaattggtgcattcttctttatcataaatgcaaagtacaaaatgttga 47238254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 37264502 - 37264340
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||| | ||||     
T  37264502 tactccctccgtcccattttaagtgagccttttgctcatttcacacatattaagaaaaagtatataagtgaaa--gagagaaaaatggttttgagtgccc 37264405  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || |||| ||||| || |||  |||||| ||||||| ||||||||||||| ||||||||| ||||    
T  37264404 ttgtcaagtattgatgcattgctctttatcataaatgcaaagtagaatatattgaattgggagtg 37264340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 416 - 540
Target Start/End: Original strand, 32971968 - 32972092
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||| |||||||||||||||| ||| || |||  |||||    
T  32971968 ctcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtcataa 32972067  T
Q  516 atacaaagtagaatatgttgaattg 540  Q
    || ||||||||||||| ||||||||    
T  32972068 atgcaaagtagaatatattgaattg 32972092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 23111039 - 23111159
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||| ||||||||||||||| ||||||| |||||  |||||||||||| |||| |||| |||||||||||||||||| ||| ||||||| |||||    
T  23111039 ctcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataa 23111138  T
Q  516 atacaaagtagaatatgttga 536  Q
    ||  |||||||||||| ||||    
T  23111139 atgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 432 - 540
Target Start/End: Original strand, 10355701 - 10355809
Alignment:
Q  432 taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 531  Q
    |||||||||||||||||||| ||| |||| |||||||||||| | || | |||||||||||||||| |||| |||||| ||||||| |||||||||||||    
T  10355701 taagaaaaagtgtataagtgtaagagagaaaaaaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagtagaatat 10355800  T
Q  532 gttgaattg 540  Q
     ||||||||    
T  10355801 attgaattg 10355809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 546
Target Start/End: Complemental strand, 38589857 - 38589761
Alignment:
Q  450 tgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  38589857 tgaaagagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 38589761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 531
Target Start/End: Complemental strand, 8150135 - 8150001
Alignment:
Q  396 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 495  Q
    |||| ||| |||| ||| || ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||  ||| |||| |||| |    
T  8150135 cattataaatgaatcttgtgttcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtg-ttttgtcaaatatttg 8150037  T
Q  496 tgtatttttctttagcataaatacaaagtagaatat 531  Q
    || ||||| | ||| ||||||  |||||||||||||    
T  8150036 tgcattttccattatcataaaatcaaagtagaatat 8150001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 541
Target Start/End: Original strand, 45218111 - 45218233
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||||| ||||| | ||||||| |||| |||||||| ||| ||||||| |||||||    
T  45218111 catttcacacaaattaagaaaa-gtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 45218209  T
Q  518 acaaagtagaatatgttgaattgg 541  Q
      |||||||||||| |||||||||    
T  45218210 gtaaagtagaatatattgaattgg 45218233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 2849409 - 2849288
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||   || |||| |||| |||||||| ||| ||||||| |||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaat 2849311  T
Q  518 acaaagtagaatatgttgaattg 540  Q
      |||||||||||| ||||||||    
T  2849310 gtaaagtagaatatattgaattg 2849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 473
Target Start/End: Original strand, 33773965 - 33774051
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||| ||||||||||||||||| |||   ||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||    
T  33773965 cctccgtcccattttaactgaacttttaattcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 33774051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 540
Target Start/End: Complemental strand, 43008057 - 43007927
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagt-gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    ||||||||||||||||| | ||||||||||   ||||||||||||| ||| ||||||| ||||| | || |||| |||| |||| ||| |||||||||||    
T  43008057 ttttgctcatttcacacatgttaagaaaaaaacgtataagtgaaagagagggaaaaatagttttgagtgtctttgtcaagtatttgtgcatttttcttta 43007958  T
Q  510 gcataaatacaaagtagaatatgttgaattg 540  Q
     |||||||  ||| |||||||| ||||||||    
T  43007957 tcataaatttaaattagaatatattgaattg 43007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 546
Target Start/End: Original strand, 30659433 - 30659560
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  |||||||||| ||||| ||  ||||| ||||||||||| ||||| | ||||||| |||| |||| |||  || ||||||| |||||||    
T  30659433 catttcacacagattaagaaaa-gtgtacaaaggaaagagagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaat 30659531  T
Q  518 acaaagtagaatatgttgaattggaagtg 546  Q
    | |||||||||||| ||||||| ||||||    
T  30659532 ataaagtagaatatattgaatttgaagtg 30659560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 540
Target Start/End: Complemental strand, 9603017 - 9602894
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9603017 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9602918  T
Q  517 tacaaagtagaatatgttgaattg 540  Q
    | |||||||||| || ||||||||    
T  9602917 tgcaaagtagaacatattgaattg 9602894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 540
Target Start/End: Complemental strand, 9830588 - 9830465
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9830588 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9830489  T
Q  517 tacaaagtagaatatgttgaattg 540  Q
    | |||||||||| || ||||||||    
T  9830488 tgcaaagtagaacatattgaattg 9830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 34064405 - 34064248
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| |||||||||| ||||| |||| ||||||  || |||||||| |||||| ||||||||||||| |||||  ||||||||||| ||||| | || |     
T  34064405 tactccctccctcccgttttatctgagcctttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtgtc- 34064307  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    || | || |||||||| ||| ||  ||| |||||||  |||||||||||| ||||||||    
T  34064306 ttgttaagtattggtgcattctttcttatcataaatgtaaagtagaatatattgaattg 34064248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 524
Target Start/End: Complemental strand, 6697242 - 6697130
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||  |||||| ||  ||| ||   |||||||| ||||||| |||     
T  6697242 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 6697144  T
Q  511 cataaatacaaagt 524  Q
    ||||||| ||||||    
T  6697143 cataaatgcaaagt 6697130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 531
Target Start/End: Complemental strand, 21446594 - 21446478
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    |||||||| | ||||||||||||||| |||||||||||||| |||||||||||  |||| | || | |||| || |||| ||| ||| || |||| ||||    
T  21446594 gctcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgcattcttttttatcata 21446495  T
Q  515 aatacaaagtagaatat 531  Q
    |||| |||||| |||||    
T  21446494 aatataaagtataatat 21446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 472
Target Start/End: Original strand, 39143601 - 39143680
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 472  Q
    ||||||| ||| |||  |||||||||||||||||| ||| ||||||||||||||| ||||||  ||||||| ||||||||    
T  39143601 tcccattataagtgagtcttttgctcatttcacacgtataaagaaaaagtgtatatgtgaaatagagagaataatggttt 39143680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 27622035 - 27621913
Alignment:
Q  375 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 474  Q
    |||||| |||| ||||| ||||||||||| ||| |  ||  ||||||||||||||||||||||||| |||||||   |||| || ||||||||| ||||     
T  27622035 aaaaaactactccctccgtcccattttaattgagctcttaactcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgattttg 27621936  T
Q  475 aatgcctttatcaactattggtg 497  Q
    | | || ||||||| ||||||||    
T  27621935 agtacccttatcaattattggtg 27621913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 430 - 540
Target Start/End: Complemental strand, 36070247 - 36070138
Alignment:
Q  430 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaat 529  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||| | || |||| |||| |||||||| ||| ||||||| ||||||   ||||||||||    
T  36070247 attaagaaaaa-tgtataaatgaaagagagaggaaaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagtagaat 36070149  T
Q  530 atgttgaattg 540  Q
    ||  |||||||    
T  36070148 atactgaattg 36070138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 9658993 - 9658937
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 473  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  9658993 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 11616733 - 11616660
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||| || |||||||||||||||| |||||| ||||  ||||||| |||| | |||||||||||||||||||    
T  11616733 ttaactgagccatttgctcatttcacacatattaaaaaaa--tgtataaatgaaggagagagaaaaatggttttaa 11616660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 18731550 - 18731466
Alignment:
Q  462 aaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||||| ||||| | || ||||||||| ||||| || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  18731550 aaaaatcgttttgagtgtctttatcaagtattgatgaattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 18731466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 496
Target Start/End: Original strand, 45890805 - 45890888
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggt 496  Q
    |||| ||||||||||| |||||||||||| |||||||  ||| | ||||||||||||||||||||||| ||| | || |||||||    
T  45890805 tttgttcatttcacacgtattaagaaaaa-tgtataaaagaaggagagagaaaaatggttttaaatgcttttgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 437 - 539
Target Start/End: Original strand, 39343644 - 39343744
Alignment:
Q  437 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    |||||||||||| ||||||  |||||| ||| ||||| | ||| ||| |||| |||| ||||||| ||||||| |||||||  |||||||||||| ||||    
T  39343644 aaaagtgtataaatgaaag--agagaacaatcgttttgagtgcatttgtcaagtatttgtgtattcttctttatcataaatgtaaagtagaatatattga 39343741  T
Q  537 att 539  Q
    |||    
T  39343742 att 39343744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 5724660 - 5724724
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctt 482  Q
    ||||||||||| |||||||||||| ||||||| |||| | ||||||||||| ||||||| ||||||    
T  5724660 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcctt 5724724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 545
Target Start/End: Original strand, 7425829 - 7425957
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg-cctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| ||  |||  | || |||||||| ||| | |  || |||||    
T  7425829 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgcattctccactatcataa 7425927  T
Q  516 atacaaagtagaatatgttgaattggaagt 545  Q
    || |||||| |||||| |||||||||||||    
T  7425928 atgcaaagtggaatatattgaattggaagt 7425957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 36194599 - 36194684
Alignment:
Q  410 cttttgctcatttcacacttattaagaaa-aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 494  Q
    ||||| ||||||||||| || |||||||| || ||||||| |||  | || |||||||||||||||||||||||||| || |||||    
T  36194599 cttttactcatttcacatttgttaagaaagaaatgtataaatgagcgagaaagaaaaatggttttaaatgcctttattaattattg 36194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 540
Target Start/End: Original strand, 3667832 - 3667951
Alignment:
Q  420 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 519  Q
    |||||||| |||||||||| |||||||||||||||   ||||||||||  |||| | || | ||||||| |||| ||| ||| ||  ||| |||||||      
T  3667832 tttcacacatattaagaaatagtgtataagtgaaaaaaagagaaaaataattttgagtgtc-ttatcaagtattagtgcattatttcttatcataaatgt 3667930  T
Q  520 aaagtagaatatgttgaattg 540  Q
    |||||||||||| ||||||||    
T  3667931 aaagtagaatatattgaattg 3667951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 13590862 - 13590918
Alignment:
Q  257 tttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatg 313  Q
    ||||||| | || ||||||||| |||||||||||||||| ||||||| |||||||||    
T  13590862 tttgtttctgattattgttatgctaatttctctaaggaccagattgacgaaatcatg 13590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 13590644 - 13590735
Alignment:
Q  159 tgaagtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagt 250  Q
    |||| ||||||||||||| || ||||||||| || ||| ||| |||||||||  | ||||||  ||| |||||| |||||||||| ||||||    
T  13590644 tgaattcagtgtgttactatttggtttctcagtggtaaaaatgctcaaatttgtatagttttatagatgtaatttgaaaattcatgattagt 13590735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 540
Target Start/End: Original strand, 14648862 - 14648993
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat-gcct-ttatcaactattggtgtatttttcttt 508  Q
    ||||||||||||| ||| |||   |||||| ||||||||||||||  ||||||||||| |||||| | |  | || |||| |||||||| |||| || ||    
T  14648862 ttttgctcatttcgcacatatattgaaaaaatgtataagtgaaagaaagagaaaaatgattttaattagtgtcttgtcaattattggtgcatttctcatt 14648961  T
Q  509 agcataaatacaaagtagaatatgttgaattg 540  Q
    | ||||||| ||| ||||||||| ||||||||    
T  14648962 atcataaatgcaaggtagaatatattgaattg 14648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 24288539 - 24288456
Alignment:
Q  457 gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||| |||| ||||| | ||||||| |||| |||| ||| ||| ||||||| |||||||  |||||||||||| ||||||||    
T  24288539 gagagataaatagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatattgaattg 24288456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 29257707 - 29257573
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||  |||||| |||||||| ||| ||||||| ||||   |||| |||||||||||||| |||  || | || ||||||| |||||| |  || |    
T  29257707 tttgctcaaatcacacatattaagacaaa-tgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtctattttccactatc 29257609  T
Q  512 ataaatacaaagtagaatatgttgaattggaagtga 547  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  29257608 ataaatgcaaagtggaatatattgaattgggagtga 29257573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 540
Target Start/End: Original strand, 37490570 - 37490692
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| | |||||||||| ||||||| |||| | |||||||||||| |||||| ||  ||| | || |||||||| ||| | |  || ||||||    
T  37490570 tcatttcacacatgttaagaaaaa-tgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataaa 37490668  T
Q  517 tacaaagtagaatatgttgaattg 540  Q
    | |||||| |||||| ||||||||    
T  37490669 tgcaaagtggaatatattgaattg 37490692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 478
Target Start/End: Complemental strand, 39498838 - 39498768
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaa--agtgtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    ||||||||||||||||||||||||| ||||  |  |||| |||||| | ||||||||||| ||||||||||    
T  39498838 cttttgctcatttcacacttattaaaaaaaatatagtattagtgaatgagagagaaaaatagttttaaatg 39498768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 44604413 - 44604487
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||| ||||||||  |||||| |||||||| ||| ||||||| |||| | |||||||||||| ||||||    
T  44604413 ttaactgaaccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatgattttaa 44604487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 37496354 - 37496392
Alignment:
Q  424 acacttattaagaaaaagtgtataagtgaaagggagaga 462  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  37496354 acacatattaagaaaaagtgtataagtgaaagagagaga 37496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 475
Target Start/End: Complemental strand, 23058972 - 23058916
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||| |||||||||||| | ||||| |||||| ||||||||||| |||||||    
T  23058972 catttcacacgtattaagaaaaa-tatataaatgaaagagagagaaaaatagttttaa 23058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 31549556 - 31549597
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaa 440  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  31549556 tttaactgagtcttttgctcattttacacttattaagaaaaa 31549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 547
Target Start/End: Complemental strand, 33584694 - 33584589
Alignment:
Q  442 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 541  Q
    ||||||| |||| | ||||||||||||||||||| |||  || | || |||||||||||| | |  || ||||||| |||| | |||||| |||||||||    
T  33584694 tgtataaatgaaggagagagaaaaatggttttaagtgctattgttaagtattggtgtattctccagtatcataaatgcaaaatggaatatattgaattgg 33584595  T
Q  542 aagtga 547  Q
     |||||    
T  33584594 gagtga 33584589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 49100453 - 49100509
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 472  Q
    ||||||||||||| |||||||||||| ||||||| ||||||  |||||||||| ||||    
T  49100453 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagacagagaaaaatagttt 49100509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 475
Target Start/End: Complemental strand, 30463173 - 30463114
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||| | |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  30463173 gctcatttcacgcgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaa 30463114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 455
Target Start/End: Complemental strand, 32346679 - 32346635
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||||    
T  32346679 ttttgttcatttcacacatattaagaaaaagtaaataagtgaaag 32346635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 539
Target Start/End: Original strand, 40023649 - 40023800
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 486  Q
    ||||| ||||| ||||| ||| | ||||| | ||||||||  |||||||||||| | ||||| |||||  ||||||||||| ||||| | || | || ||    
T  40023649 cctccatcccactttaagtgagctttttgttaatttcacatgtattaagaaaaaatatataattgaaaaagagagaaaaattgttttgagtgtc-ttgtc 40023747  T
Q  487 aactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    || |||| | | |||| || ||| ||||||| ||||||| ||||| |||||||    
T  40023748 aaatattagagcatttctccttaccataaatgcaaagtaaaatatattgaatt 40023800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 539
Target Start/End: Original strand, 5147413 - 5147570
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| | ||||||||||||  ||||||||||| |||| | || |     
T  5147413 tactccctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtcc 5147512  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| |||||||    
T  5147513 ttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 540
Target Start/End: Complemental strand, 38979095 - 38978937
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||| | ||||     
T  38979095 tactccctccgtcccattttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgccc 38978996  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||| ||||||||||  |||  |||||| ||||||| ||||||||||||| || |||||    
T  38978995 ttattaactattggtacattcctctttatcataaatgcaaagtagaatatattaaattg 38978937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 546
Target Start/End: Original strand, 13016298 - 13016444
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 498  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | ||||||||||||||||     
T  13016298 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13016397  T
Q  499 atttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    | || |||||| ||||||| ||||||||||||| ||||||||| ||||    
T  13016398 a-ttctctttatcataaatgcaaagtagaatatattgaattgggagtg 13016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 15564810 - 15564963
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||||||||| |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | | ||     
T  15564810 tacttcctccatcccattttagctgagtctttcgctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtaccc 15564909  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    |||||||||||||||| ||     |||| ||||||| ||||||||||||| || |||||    
T  15564910 ttatcaactattggtgcat-----tttatcataaatgcaaagtagaatatattaaattg 15564963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 399 - 540
Target Start/End: Original strand, 13087676 - 13087816
Alignment:
Q  399 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 498  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | ||||||||||||||||     
T  13087676 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13087775  T
Q  499 atttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    | || |||||| ||||||| ||||||||||||| ||||||||    
T  13087776 a-ttctctttatcataaatgcaaagtagaatatattgaattg 13087816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 5357733 - 5357898
Alignment:
Q  380 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    |||||| ||||| ||||| ||||| |||||| |||||||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||     
T  5357733 agtactccctccgtcccaatttaattgaaccatttgctcattacacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgt 5357831  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    |||| | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| ||||||||||    
T  5357832 ctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtg 5357898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 538
Target Start/End: Complemental strand, 42819060 - 42818938
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| | |||| |||| ||  ||||||| ||| ||||||| |||||    
T  42819060 ctcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatcataa 42818961  T
Q  516 atacaaagtagaatatgttgaat 538  Q
    ||  |||||||||||| ||||||    
T  42818960 atgtaaagtagaatatattgaat 42818938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 530
Target Start/End: Complemental strand, 4195112 - 4194975
Alignment:
Q  394 cccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    |||||||||||||| || ||  | ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| |||| ||||||    
T  4195112 cccattttaactgagcccttgacgcatttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactat 4195013  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaata 530  Q
    || || ||| ||||||| |||||||  |||||||||||    
T  4195012 tgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 540
Target Start/End: Complemental strand, 31090482 - 31090337
Alignment:
Q  395 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 494  Q
    |||||||||||||  | ||  ||||||| ||| ||||||||||||| |||||||||||||  |||||||||||| |||| | |||| |||||||||||||    
T  31090482 ccattttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattg 31090383  T
Q  495 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||| ||| ||||||| ||||||  ||||||||||||| | ||||||    
T  31090382 gtgcattcttctttatcataaacgcaaagtagaatatatggaattg 31090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 382 - 545
Target Start/End: Original strand, 16926006 - 16926171
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta---taagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||| ||||| ||||||| ||| ||| ||||||||||||||||||| |||||| || |||||||   |||||||||| | ||||||||||||||| | ||    
T  16926006 tactccctccgtcccattataattgacccttttgctcatttcacacatattaa-aagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtg 16926104  T
Q  479 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 545  Q
    ||||  | || |||||||| ||| ||||||| |||||||  |||||||||||| |||||||||||||    
T  16926105 ccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaatatattgaattggaagt 16926171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 39060340 - 39060503
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| | ||| ||||| |||||| ||||||||||||||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||| |    
T  39060340 tactccctccgttccaatttaattgaaccatttgctcatttcacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgcat 39060438  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || | || |||||||  ||| ||||||| ||||||| ||||||||| ||| ||| ||||||||||    
T  39060439 ttgttaagtattggtccattcttctttatcataaatgcaaagtagactatattgtattggaagtg 39060503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 546
Target Start/End: Original strand, 25111078 - 25111229
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| |||| |||    
T  25111078 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtat 25111175  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  25111176 tgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 25111229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 546
Target Start/End: Original strand, 25170169 - 25170320
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| |||| |||    
T  25170169 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtat 25170266  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  25170267 tgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 25170320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 380 - 540
Target Start/End: Complemental strand, 31196512 - 31196352
Alignment:
Q  380 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 479  Q
    |||||||||||| ||||||||||||||||   || |||||||||||||||||||||||||  ||||||| |||||| || |||||||| ||||| | ||     
T  31196512 agtacttcctccgtcccattttaactgaattcttggctcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgt 31196413  T
Q  480 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    | || |||  ||||| || |||||||||||  ||| || ||||||||||||| ||| ||||    
T  31196412 ccttgtcatttattgctgcatttttctttattatacatgcaaagtagaatatattggattg 31196352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 547
Target Start/End: Original strand, 11099429 - 11099559
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 515  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||||| ||||||| ||  ||| | || |||||||| ||| | |  || |||||    
T  11099429 ctcatttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataa 11099527  T
Q  516 atacaaagtagaatatgttgaattggaagtga 547  Q
    ||||||||| |||||| ||||||||| |||||    
T  11099528 atacaaagtggaatatattgaattgggagtga 11099559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 546
Target Start/End: Complemental strand, 25108751 - 25108600
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| | || |||    
T  25108751 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgttaagtat 25108654  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || || ||| ||||||| |||||||  |||||| ||||| ||||||||||||||    
T  25108653 tgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtg 25108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 546
Target Start/End: Complemental strand, 25167843 - 25167692
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 492  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| | || |||    
T  25167843 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgttaagtat 25167746  T
Q  493 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
    || || ||| ||||||| |||||||  |||||| ||||| ||||||||||||||    
T  25167745 tgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtg 25167692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 382 - 539
Target Start/End: Original strand, 39060868 - 39061028
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagt---gtataagtgaaagggagagaaaaatggttttaaatg 478  Q
    |||| ||||| ||||||||||| | |  ||||  ||||||||||||||||||||||||| |   ||||||||||||| ||||||||||||  ||| | ||    
T  39060868 tactccctccgtcccattttaatttagactttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtg 39060967  T
Q  479 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
     | || ||||| | | ||| ||| ||||||| ||||||| ||||||||||||| |||||||    
T  39060968 tccttgtcaaccactagtgcattcttctttatcataaatgcaaagtagaatatattgaatt 39061028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 443 - 540
Target Start/End: Complemental strand, 15898321 - 15898224
Alignment:
Q  443 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||||||||||||| ||||||||||||  ||||| || | |||| |||||||| || ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  15898321 gtataagtgaaagagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattg 15898224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 481 - 542
Target Start/End: Complemental strand, 7871405 - 7871344
Alignment:
Q  481 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgga 542  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||| || |||||||    
T  7871405 tttatcaactattggtgtatttttctttatcataaatgtaaagtagaatatattaaattgga 7871344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 546
Target Start/End: Complemental strand, 35988808 - 35988661
Alignment:
Q  398 ttttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtg 497  Q
    |||||| ||||||||||  ||||||||||  |||||||||||| | |||||||||||  ||||||||||| ||||||| ||   || |||| ||||||||    
T  35988808 ttttaaatgaacctttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtg-tgttgtcaagtattggtg 35988710  T
Q  498 tatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 546  Q
     |||  |  ||| ||||||| |||||| |||||| ||||||||| ||||    
T  35988709 cattcattcttatcataaatgcaaagttgaatatattgaattgggagtg 35988661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 417 - 545
Target Start/End: Original strand, 42575591 - 42575718
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| |||  ||   || |||||||||||| | |  || ||||||    
T  42575591 tcatttcacacatattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgctcttggtaagtattggtgtattctccactatcataaa 42575689  T
Q  517 tacaaagtagaatatgttgaattggaagt 545  Q
    | |||||| |||||| |||||||||||||    
T  42575690 tgcaaagtggaatatattgaattggaagt 42575718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 541
Target Start/End: Original strand, 4044433 - 4044553
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||||||  |||||||||| |||||||| ||||| | | | ||||| | |||| ||||| |||||||| |||||||| ||| ||||||| |||||||     
T  4044433 atttcacacagattaagaaaa-gtgtataaatgaaaagaaaaaaaaaa-gattttgaatgcttttatcaagtattggtgcattcttctttatcataaatg 4044530  T
Q  519 caaagtagaatatgttgaattgg 541  Q
     |||||||||||| |||||||||    
T  4044531 taaagtagaatatattgaattgg 4044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 540
Target Start/End: Original strand, 6172926 - 6173055
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||   |||| |||||| ||||||| |||  ||||||| ||||  || ||||  | |||    
T  6172926 cttttcctcatttcacacttattaagaaaaa-tgtattagtgaagaagagataaaaatagttttaagtgctcttatcaaatattaatgcatttaccatta 6173024  T
Q  510 gcataaatacaaagtagaatatgttgaattg 540  Q
     ||||||| ||||||| ||||| ||||||||    
T  6173025 tcataaatgcaaagtataatatattgaattg 6173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 539
Target Start/End: Original strand, 7311128 - 7311254
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 509  Q
    ||||| || |||||| ||||||||||||||| ||||| | | ||||  |||||||||||||||||| |||  ||||||| |||| ||| ||||  | |||    
T  7311128 cttttactgatttcatacttattaagaaaaa-tgtattaataaaag--agagaaaaatggttttaagtgctcttatcaagtatttgtgcatttaccatta 7311224  T
Q  510 gcataaatacaaagtagaatatgttgaatt 539  Q
     ||||||| ||||||||||||| |||||||    
T  7311225 tcataaatgcaaagtagaatatattgaatt 7311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 546
Target Start/End: Original strand, 36006849 - 36006973
Alignment:
Q  418 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 517  Q
    ||||||||||  ||||||||||| ||||||| | |||| ||||   |||||||||||| || |||| |||| |||| ||| ||| ||||||| |||||||    
T  36006849 catttcacacagattaagaaaaa-tgtataaataaaagagaga---aaatggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaat 36006944  T
Q  518 acaaagtagaatatgttgaattggaagtg 546  Q
      ||||||||||||  |||||||||||||    
T  36006945 gtaaagtagaatatactgaattggaagtg 36006973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 460
Target Start/End: Original strand, 6629318 - 6629391
Alignment:
Q  387 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 460  Q
    ||||| |||||||||| |||| ||||||  || |||||||| |||||||||||||||||||| |||||| ||||    
T  6629318 cctccgtcccattttatctgagcctttttttcttttcacacatattaagaaaaagtgtataaatgaaagagaga 6629391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 536
Target Start/End: Complemental strand, 35667073 - 35666922
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| |||| |||||| ||||| |||  ||||  ||||||||||| ||||||||||||| | ||| | ||||  |||||||||||| ||||||| ||| |    
T  35667073 tactccctctctcccaatttaagtgagtctttcactcatttcacatttattaagaaaaatt-tattattgaa--ggagagaaaaatagttttaagtgctt 35666977  T
Q  482 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 536  Q
    || | || |||||||| ||||  | |||  |||||||||||||||||||| ||||    
T  35666976 ttcttaagtattggtgcatttaccattattataaatacaaagtagaatatattga 35666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 440
Target Start/End: Complemental strand, 22983134 - 22983076
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa 440  Q
    |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  22983134 tactccctccgtcccattttaactaaacattttgttcatttcacacatattaagaaaaa 22983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 455
Target Start/End: Complemental strand, 792168 - 792095
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 455  Q
    ||||||||| |||||||| ||| ||| | ||||||||||||||||  ||||||||| | |||||||||| ||||    
T  792168 tacttcctctctcccattataagtgagcattttgctcatttcacatatattaagaatatgtgtataagtaaaag 792095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 496
Target Start/End: Original strand, 41594795 - 41594878
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggt 496  Q
    ||||||||||||| || |||||||||||| | |||||||||| | |||||||||||  |||||||||  ||| |||| |||||||    
T  41594795 tttgctcatttcatacatattaagaaaaa-tatataagtgaatgagagagaaaaataattttaaatgtttttgtcaagtattggt 41594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 858495 - 858433
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||||| |||||||||||| ||||||| | || | |||| ||||||||||||||    
T  858495 tttgctcatttcacacatattaagaaaaa-tgtataaataaaggagagaaaaaaatggttttaa 858433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 475
Target Start/End: Complemental strand, 3725342 - 3725284
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||| |||||||||||| |||||||  ||| | |||||||||||||||||||    
T  3725342 ctcatttcacacatattaagaaaaa-tgtataaaggaaggagagagaaaaatggttttaa 3725284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 15898668 - 15898605
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 445  Q
    |||| ||||| ||||||||||| |||  |||| | |||||||||||||||||||||||| ||||    
T  15898668 tactccctccgtcccattttaaatgagtctttagttcatttcacacttattaagaaaaaatgta 15898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 467
Target Start/End: Original strand, 25344692 - 25344742
Alignment:
Q  416 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 467  Q
    |||||||||||| || ||||||||| |||||||||||||| |||||||||||    
T  25344692 ctcatttcacacatactaagaaaaa-tgtataagtgaaagagagagaaaaat 25344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 467
Target Start/End: Original strand, 35012812 - 35012851
Alignment:
Q  428 ttattaagaaaaagtgtataagtgaaagggagagaaaaat 467  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  35012812 ttattaagaaaaagtgtataagtgaaagagaaagaaaaat 35012851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 531
Target Start/End: Complemental strand, 35968857 - 35968762
Alignment:
Q  436 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 531  Q
    ||||||||||||| |||||| || |||||||| ||||| | || |||| |||| |||| ||  ||| |||||||  ||||||| ||||||||||||    
T  35968857 aaaaagtgtataaatgaaagagaaagaaaaatagttttgagtgtctttgtcaagtattagtacattcttctttattataaatataaagtagaatat 35968762  T

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Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 42211489 - 42211427
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    |||||||||||||||| |||||| ||||| ||||||| |||| | | |||||||||||||||||    
T  42211489 tttgctcatttcacacatattaa-aaaaaatgtataaatgaaggtgggagaaaaatggttttaa 42211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 39212500 - 39212550
Alignment:
Q  410 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 460  Q
    |||||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  39212500 cttttgttcatttcacgcatattaagaaaaattgtataagtgaaagagaga 39212550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 543
Target Start/End: Complemental strand, 4475405 - 4475276
Alignment:
Q  411 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 510  Q
    ||||| ||||| ||||| ||||||||||| |||||||||||||||  ||||||||||  | || | || | || |||| |||||||| |||   | |||     
T  4475405 ttttgttcattgcacacatattaagaaaa-gtgtataagtgaaagaaagagaaaaat--tgttgagtgtccttgtcaagtattggtgcattcaccattat 4475309  T
Q  511 cataaatacaaagtagaatatgttgaattggaa 543  Q
    ||||||| |||||| ||| ||||||||||||||    
T  4475308 cataaatgcaaagtggaaaatgttgaattggaa 4475276  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 541
Target Start/End: Complemental strand, 33988360 - 33988232
Alignment:
Q  412 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 511  Q
    ||||||||  |||||| |||||||| ||| ||||||| |||| | || |||||||||||||||| ||  ||| | || |||||||||||| | |  || |    
T  33988360 tttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtgtattctccactatc 33988262  T
Q  512 ataaatacaaagtagaatatgttgaattgg 541  Q
    ||||||  ||||| |||||| |||||||||    
T  33988261 ataaatgtaaagtggaatatattgaattgg 33988232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 39035834 - 39035914
Alignment:
Q  444 tataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagt 524  Q
    |||||||||||| || |||||||| ||||| |||||| ||| || ||||| ||| |||  |||||| ||||| ||||||||    
T  39035834 tataagtgaaagagatagaaaaattgttttgaatgcccttaccagctattagtgcattcctctttatcataactacaaagt 39035914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 475
Target Start/End: Complemental strand, 41184817 - 41184758
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||||| |||||||||||| ||||||| |||| | || |||||||| |||||||    
T  41184817 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggagaaagaaaaatagttttaa 41184758  T

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Target: scaffold0576 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 540
Target Start/End: Complemental strand, 742 - 598
Alignment:
Q  395 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 494  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||||||||||||    
T  742 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 644  T
Q  495 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 540  Q
    ||| ||| ||||||| ||||||| |||||||||||||  |||||||    
T  643 gtgcattcttctttatcataaatccaaagtagaatataatgaattg 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 393 - 539
Target Start/End: Original strand, 10717 - 10864
Alignment:
Q  393 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaag-tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaacta 491  Q
    |||||||||||||||  | || |||||||||||| |||||||||||||  ||| |||||||||| ||||||||||||| ||| | || | ||||||||||    
T  10717 tcccattttaactgagtcattggctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaacta 10816  T
Q  492 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 539  Q
    |||||  ||| ||||||| ||||||| ||||||| ||||| |||||||    
T  10817 ttggttcattcttctttatcataaatgcaaagtaaaatatattgaatt 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 506
Target Start/End: Original strand, 7838 - 7960
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 481  Q
    |||| ||||| ||| ||||||| ||| || ||  ||||||||||| ||||||||||||| ||||||| |||||  |||||||||||  |||| | |||||    
T  7838 tactccctccgtcctattttaattgagcccttgactcatttcacatttattaagaaaaaatgtataaatgaaa--gagagaaaaattattttgagtgcct 7935  T
Q  482 ttatcaactattggtgtatttttct 506  Q
    |||||||||||||||| ||||||||    
T  7936 ttatcaactattggtgcatttttct 7960  T

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Target: scaffold0262 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 539
Target Start/End: Original strand, 12385 - 12509
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||| ||||||||||||  |||||| |||||| ||| ||| ||||||||| | || |||| |||| |||| ||| ||| |||||||  |||    
T  12385 gctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattata 12484  T
Q  515 aatacaaagtagaatatgttgaatt 539  Q
    |||  |||||||||||| |||||||    
T  12485 aatgtaaagtagaatatattgaatt 12509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 98997 - 98923
Alignment:
Q  400 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||||| |||| ||||||||||| |||||||||||| ||||||| |||| | |||||||||||| ||||||    
T  98997 ttaactgaaccatttgttcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaaaatgattttaa 98923  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 541
Target Start/End: Original strand, 352415 - 352536
Alignment:
Q  417 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 516  Q
    |||||||||||  |||||||||| |||||||| | ||||  ||||||||||  |||| | || |||| | || |||||||| ||| ||||||| ||||||    
T  352415 tcatttcacacagattaagaaaa-gtgtataaataaaag--agagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaa 352511  T
Q  517 tacaaagtagaatatgttgaattgg 541  Q
    |  |||||||||||| |||||||||    
T  352512 tgtaaagtagaatatattgaattgg 352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 465
Target Start/End: Complemental strand, 4484 - 4438
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 465  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  4484 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 532
Target Start/End: Original strand, 9503 - 9618
Alignment:
Q  415 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 514  Q
    ||||||||||||  ||||||||||||  |||||| |||| | ||||||||||||||||||| |||  || | || ||||  |||||| | | ||| ||||    
T  9503 gctcatttcaca--tattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatgtattctccattatcata 9600  T
Q  515 aatacaaagtagaatatg 532  Q
    ||| |||||| |||||||    
T  9601 aatgcaaagtggaatatg 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 5969 - 5851
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||||||||  |||||||||| |||||||| | ||||  ||||||||||| | || | || ||||||||| ||||| || |||  |||||| |||||||     
T  5969 atttcacacaaattaagaaaa-gtgtataaataaaag--agagaaaaatgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatg 5873  T
Q  519 caaagtagaatatgttgaattg 540  Q
     |||||||||||| ||||||||    
T  5872 taaagtagaatatattgaattg 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 518
Target Start/End: Complemental strand, 158134 - 158068
Alignment:
Q  452 aaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 518  Q
    |||| ||||||||||||||||| |||| | ||||||||||||| ||| || ||||||  ||||||||    
T  158134 aaagagagagaaaaatggttttgaatgtccttatcaactattgatgttttcttctttgtcataaata 158068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 475
Target Start/End: Complemental strand, 14609 - 14554
Alignment:
Q  419 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 475  Q
    ||||||||| |||||||||||| ||||||| |||| |||||| |||||| |||||||    
T  14609 atttcacacgtattaagaaaaa-tgtataaatgaaggggagataaaaatagttttaa 14554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 220212 - 220132
Alignment:
Q  382 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 462  Q
    |||| ||||| || ||||||||||||    || |||||||||||||||| ||||||| |||||||||| || || ||||||    
T  220212 tactccctccgtcgcattttaactgagttattggctcatttcacacttactaagaaagagtgtataagagagagagagaga 220132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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