View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6883_low_7 (Length: 477)

Name: NF6883_low_7
Description: NF6883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6883_low_7
NF6883_low_7
[»] chr7 (27 HSPs)
chr7 (219-467)||(13645061-13645309)
chr7 (219-467)||(48001094-48001342)
chr7 (219-467)||(14102067-14102315)
chr7 (219-467)||(14412084-14412332)
chr7 (219-467)||(30846541-30846793)
chr7 (224-446)||(19072548-19072770)
chr7 (233-467)||(11886103-11886338)
chr7 (219-385)||(31512839-31513006)
chr7 (219-371)||(47750999-47751152)
chr7 (227-322)||(12027561-12027657)
chr7 (219-282)||(38555170-38555234)
chr7 (219-256)||(11886064-11886101)
chr7 (394-443)||(11886510-11886560)
chr7 (394-443)||(14101845-14101895)
chr7 (394-443)||(14411862-14411912)
chr7 (287-331)||(13644590-13644634)
chr7 (287-331)||(14101591-14101635)
chr7 (287-331)||(14411608-14411652)
chr7 (219-256)||(11886830-11886868)
chr7 (394-443)||(13644839-13644889)
chr7 (219-256)||(14101528-14101566)
chr7 (219-256)||(14411545-14411583)
chr7 (359-443)||(19073170-19073256)
chr7 (394-443)||(30846337-30846387)
chr7 (287-331)||(11886760-11886804)
chr7 (287-331)||(30846094-30846138)
chr7 (287-331)||(38555273-38555317)
[»] scaffold0217 (1 HSPs)
scaffold0217 (219-467)||(8807-9056)
[»] chr3 (39 HSPs)
chr3 (219-466)||(26494222-26494470)
chr3 (219-467)||(11270003-11270251)
chr3 (219-467)||(32743287-32743535)
chr3 (219-467)||(20484738-20484988)
chr3 (243-467)||(10658945-10659170)
chr3 (219-467)||(7941725-7941973)
chr3 (219-467)||(39999298-39999546)
chr3 (224-467)||(19842614-19842856)
chr3 (219-467)||(45075452-45075700)
chr3 (219-467)||(32592323-32592568)
chr3 (219-467)||(4274668-4274917)
chr3 (227-466)||(4330952-4331188)
chr3 (219-371)||(6143777-6143930)
chr3 (287-331)||(7941279-7941323)
chr3 (287-331)||(20485391-20485435)
chr3 (287-331)||(30294732-30294776)
chr3 (359-443)||(32592688-32592773)
chr3 (287-331)||(32592972-32593016)
chr3 (287-331)||(51755710-51755754)
chr3 (394-443)||(4274467-4274517)
chr3 (394-443)||(30294550-30294600)
chr3 (287-331)||(4274229-4274273)
chr3 (287-331)||(26493723-26493767)
chr3 (359-443)||(26493995-26494080)
chr3 (431-467)||(34722375-34722411)
chr3 (287-331)||(45076107-45076151)
chr3 (404-443)||(45075870-45075909)
chr3 (394-443)||(7941520-7941570)
chr3 (394-443)||(20485142-20485192)
chr3 (219-256)||(26493660-26493698)
chr3 (136-189)||(19842553-19842606)
chr3 (431-467)||(2062522-2062558)
chr3 (228-256)||(6525247-6525275)
chr3 (219-254)||(7941216-7941252)
chr3 (219-254)||(20485462-20485498)
chr3 (431-467)||(31890128-31890164)
chr3 (228-256)||(31890171-31890199)
chr3 (228-256)||(34722340-34722368)
chr3 (219-254)||(45076180-45076216)
[»] chr5 (24 HSPs)
chr5 (219-467)||(41622253-41622503)
chr5 (219-466)||(35282114-35282361)
chr5 (236-467)||(20743705-20743938)
chr5 (219-457)||(2170298-2170537)
chr5 (219-467)||(35671188-35671437)
chr5 (225-443)||(30192604-30192824)
chr5 (219-385)||(42912677-42912845)
chr5 (287-331)||(2169854-2169898)
chr5 (224-267)||(20743937-20743981)
chr5 (228-284)||(13590537-13590594)
chr5 (228-267)||(13580672-13580712)
chr5 (287-331)||(40789068-40789112)
chr5 (287-322)||(13590395-13590430)
chr5 (80-124)||(40789289-40789335)
chr5 (394-443)||(20743504-20743554)
chr5 (394-439)||(35671672-35671718)
chr5 (219-256)||(35671960-35671998)
chr5 (219-256)||(40789136-40789174)
chr5 (434-467)||(13589738-13589771)
chr5 (404-440)||(2170102-2170138)
chr5 (431-467)||(30966240-30966276)
chr5 (228-256)||(30966573-30966601)
chr5 (287-331)||(35671891-35671935)
chr5 (287-331)||(41622908-41622952)
[»] chr4 (24 HSPs)
chr4 (219-467)||(37295927-37296178)
chr4 (219-467)||(48807105-48807353)
chr4 (219-466)||(37855939-37856186)
chr4 (219-464)||(43175813-43176051)
chr4 (270-467)||(28235005-28235198)
chr4 (222-467)||(11565975-11566207)
chr4 (219-443)||(2449354-2449579)
chr4 (270-467)||(16473003-16473195)
chr4 (219-327)||(18884362-18884471)
chr4 (359-467)||(7088417-7088530)
chr4 (287-333)||(43176486-43176532)
chr4 (287-331)||(6092615-6092659)
chr4 (287-331)||(48806654-48806698)
chr4 (394-443)||(48806899-48806949)
chr4 (431-467)||(43493027-43493063)
chr4 (404-443)||(6092382-6092421)
chr4 (219-249)||(27872462-27872492)
chr4 (394-443)||(37856359-37856409)
chr4 (219-254)||(2449056-2449092)
chr4 (277-305)||(28235261-28235289)
chr4 (219-254)||(43176559-43176595)
chr4 (228-256)||(43492992-43493020)
chr4 (219-254)||(48806591-48806627)
chr4 (431-467)||(53536765-53536801)
[»] chr2 (36 HSPs)
chr2 (219-464)||(28138686-28138931)
chr2 (219-467)||(14002599-14002847)
chr2 (224-463)||(2271462-2271699)
chr2 (219-467)||(37321859-37322104)
chr2 (226-467)||(40156622-40156859)
chr2 (276-467)||(23265961-23266153)
chr2 (219-467)||(29407587-29407854)
chr2 (270-466)||(6232766-6232959)
chr2 (219-385)||(28419513-28419681)
chr2 (219-385)||(12252292-12252459)
chr2 (219-345)||(33222722-33222849)
chr2 (400-467)||(23260955-23261022)
chr2 (219-292)||(37294787-37294861)
chr2 (395-459)||(14003002-14003067)
chr2 (359-443)||(2271254-2271339)
chr2 (282-323)||(16544503-16544544)
chr2 (287-331)||(1728933-1728977)
chr2 (359-443)||(23260754-23260838)
chr2 (359-443)||(23265760-23265844)
chr2 (287-331)||(29407142-29407186)
chr2 (219-257)||(16544546-16544584)
chr2 (287-333)||(23260514-23260560)
chr2 (289-331)||(37294501-37294543)
chr2 (219-256)||(23266159-23266196)
chr2 (287-331)||(28139416-28139460)
chr2 (404-443)||(1729185-1729224)
chr2 (219-256)||(28139485-28139523)
chr2 (219-256)||(37294435-37294473)
chr2 (431-464)||(37893289-37893322)
chr2 (219-254)||(29407079-29407115)
chr2 (431-467)||(29601057-29601093)
chr2 (228-256)||(30271189-30271217)
chr2 (431-467)||(30273037-30273073)
chr2 (228-256)||(30273080-30273108)
chr2 (228-256)||(33661906-33661934)
chr2 (228-256)||(37893329-37893357)
[»] chr8 (48 HSPs)
chr8 (219-467)||(37656017-37656266)
chr8 (219-467)||(16939995-16940243)
chr8 (219-467)||(35206378-35206627)
chr8 (224-467)||(13782346-13782589)
chr8 (219-466)||(3085621-3085870)
chr8 (224-461)||(41471203-41471440)
chr8 (219-468)||(22961224-22961471)
chr8 (219-467)||(39208138-39208385)
chr8 (219-466)||(36595665-36595913)
chr8 (219-444)||(36345677-36345898)
chr8 (257-467)||(34892063-34892273)
chr8 (219-467)||(38133865-38134105)
chr8 (224-467)||(43520501-43520738)
chr8 (219-467)||(39512934-39513180)
chr8 (219-467)||(7121519-7121753)
chr8 (276-467)||(45410270-45410458)
chr8 (219-256)||(3086361-3086398)
chr8 (287-331)||(7121069-7121113)
chr8 (287-331)||(34892679-34892723)
chr8 (287-331)||(39512483-39512527)
chr8 (287-331)||(40741075-40741119)
chr8 (394-443)||(7121311-7121361)
chr8 (394-443)||(13782744-13782794)
chr8 (394-443)||(39512731-39512781)
chr8 (394-443)||(40741616-40741666)
chr8 (431-467)||(3641796-3641832)
chr8 (287-331)||(16939549-16939593)
chr8 (287-331)||(36595196-36595240)
chr8 (359-443)||(36595443-36595528)
chr8 (287-331)||(37656666-37656710)
chr8 (287-331)||(39207805-39207849)
chr8 (359-443)||(41471589-41471674)
chr8 (287-331)||(41471896-41471940)
chr8 (404-443)||(43520296-43520335)
chr8 (219-256)||(7121006-7121044)
chr8 (394-443)||(16939790-16939840)
chr8 (394-443)||(22961022-22961072)
chr8 (219-256)||(35205920-35205958)
chr8 (219-256)||(41471965-41472003)
chr8 (291-327)||(3086297-3086333)
chr8 (138-189)||(3086401-3086453)
chr8 (228-256)||(3641761-3641789)
chr8 (219-254)||(13783039-13783075)
chr8 (431-467)||(20861789-20861825)
chr8 (228-256)||(20861832-20861860)
chr8 (219-254)||(37656737-37656773)
chr8 (219-254)||(40741012-40741048)
chr8 (431-467)||(44885840-44885876)
[»] chr1 (21 HSPs)
chr1 (219-466)||(7943048-7943295)
chr1 (219-466)||(42290376-42290623)
chr1 (219-467)||(51461162-51461411)
chr1 (219-467)||(21699981-21700230)
chr1 (219-467)||(5329732-5329981)
chr1 (219-456)||(12627864-12628102)
chr1 (219-381)||(18609703-18609862)
chr1 (316-377)||(13760897-13760958)
chr1 (324-385)||(41909623-41909684)
chr1 (219-266)||(13760963-13761011)
chr1 (394-443)||(12627630-12627679)
chr1 (287-331)||(12627382-12627426)
chr1 (287-331)||(41909111-41909155)
chr1 (394-443)||(5329509-5329559)
chr1 (287-331)||(5329266-5329310)
chr1 (431-467)||(41909556-41909592)
chr1 (219-256)||(12627319-12627357)
chr1 (394-443)||(51461565-51461615)
chr1 (290-331)||(21268626-21268667)
chr1 (404-441)||(41909348-41909385)
chr1 (431-467)||(15695945-15695981)
[»] chr6 (11 HSPs)
chr6 (219-466)||(11159146-11159398)
chr6 (219-437)||(35096744-35096963)
chr6 (270-467)||(26350388-26350580)
chr6 (219-371)||(117709-117862)
chr6 (219-467)||(17338498-17338731)
chr6 (219-371)||(15546204-15546356)
chr6 (277-467)||(32396370-32396550)
chr6 (287-331)||(11157905-11157949)
chr6 (394-443)||(11158941-11158991)
chr6 (394-443)||(17338296-17338346)
chr6 (277-305)||(26350297-26350325)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-467)||(127650-127846)
[»] scaffold0092 (1 HSPs)
scaffold0092 (219-385)||(54671-54838)
[»] scaffold1379 (2 HSPs)
scaffold1379 (431-467)||(320-356)
scaffold1379 (228-256)||(363-391)
[»] scaffold0283 (1 HSPs)
scaffold0283 (431-467)||(1525-1561)


Alignment Details
Target: chr7 (Bit Score: 181; Significance: 1e-97; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 13645309 - 13645061
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  13645309 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 13645210  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        | ||||||||||||||||||||||    
T  13645209 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-aagcaacaacaaaaacgttacaaa 13645111  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13645110 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 13645061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 48001342 - 48001094
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  48001342 acacttaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 48001243  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||| ||||||||||||||    
T  48001242 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaataaaaacgttacaaa 48001144  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48001143 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 48001094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 14102315 - 14102067
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14102315 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 14102216  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||||||| |||||||||| |||||||        |||||||||||||||||||||||     
T  14102215 atgaagaaatatgagaaatgaataatatttgcaatcggtagttaatggacctaaaatgataattcaataaaaaaa-atgcaacaacaaaaacgttacaat 14102117  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14102116 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 14102067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 14412332 - 14412084
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14412332 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 14412233  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||||||| |||||||||| |||||||        |||||||||||||||||||||||     
T  14412232 atgaagaaatatgagaaatgaataatatttgcaatcggtagttaatggacctaaaatgataattcaataaaaaaa-atgcaacaacaaaaacgttacaat 14412134  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14412133 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 14412084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 30846793 - 30846541
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatt---tttatgatttcattcatatgattttgttgaca 314  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||   ||||||||||||||||||||||||||||| |     
T  30846793 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattattatttttatgatttcattcatatgattttgttgtcg 30846694  T
Q  315 taaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttac 414  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||| | |||||||||    
T  30846693 taaatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaataaatgcaacaaaagaaacgttac 30846594  T
Q  415 aaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30846593 aaatgatagaatagttatatttgtaattattagtaattaatttcattgatgtc 30846541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 224 - 446
Target Start/End: Original strand, 19072548 - 19072770
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgatttt-gttgacataaatga 321  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  19072548 taaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgatttttgttgccataaatga 19072647  T
Q  322 agaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgat 421  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||    
T  19072648 agaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaa--atgcaacaacaaaaacgttacaaatgat 19072745  T
Q  422 agaataattatatttgtaattatta 446  Q
    |||||||||||||||||||||||||    
T  19072746 agaataattatatttgtaattatta 19072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 233 - 467
Target Start/End: Original strand, 11886103 - 11886338
Alignment:
Q  233 cttaattaaatttaattctttaatc--ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatg 330  Q
    |||||||||||||||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  11886103 cttaattaaatttaattctttaatcctttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccctaaatgaagaaatatg 11886202  T
Q  331 atagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataatt 430  Q
    | ||||||||||||||||||||| | ||||||| || |||||||| |||||||||        |||||||||||||||||||||||||||||||| ||||    
T  11886203 agagatgaataatatctgcaatctgtagttaat-gacctaaaatggtgattcaataaaaaaaaatgcaacaacaaaaacgttacaaatgatagaacaatt 11886301  T
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||    
T  11886302 atatttgtaattattagtaattaatttcattgatgtc 11886338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 385
Target Start/End: Complemental strand, 31513006 - 31512839
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  31513006 acacctaaattttccttaattaaatttaattatttaattcttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 31512907  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  31512906 atgaaaaaatatgatagatgaataatatctgcaatcggtaattaatggacctaaaatgatgattcaat 31512839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 47751152 - 47750999
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  47751152 acacctaaattttccttaattcaatttaattctttaaacattttaaggaattaaacataattatttttatgatttcattcatatgattttgttgtcataa 47751053  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaa 371  Q
    |||||||||||||| ||||||||||||||| || |||| | |||||||| ||||    
T  47751052 atgaagaaatatgagagatgaataatatctacattcggtaattaatggacctaa 47750999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 12027561 - 12027657
Alignment:
Q  227 attttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  12027561 attttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccttaaatgaa 12027657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 38555170 - 38555234
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatt 282  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  38555170 acacctaaatttttcttaattaaatttaattctttaatccttttaaggaattaaacataattatt 38555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 11886064 - 11886101
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat 256  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11886064 acacctaaattttccttaattaaatttaattctttaat 11886101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 11886510 - 11886560
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  11886510 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 11886560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 14101895 - 14101845
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  14101895 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 14101845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 14411912 - 14411862
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  14411912 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 14411862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 13644590 - 13644634
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  13644590 tgattttattcatataattttgttgccataaatgaagaaatatga 13644634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 14101591 - 14101635
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  14101591 tgatttcatttatataattttgttgccataaatgaagaaatatga 14101635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 14411608 - 14411652
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  14411608 tgatttcatttatataattttgttgccataaatgaagaaatatga 14411652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 11886868 - 11886830
Alignment:
Q  219 acacctaaattttcctt-aattaaatttaattctttaat 256  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  11886868 acacctaaattttcctttaattaaatttaattctttaat 11886830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 13644889 - 13644839
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||||||    
T  13644889 atgcaacaacaaaaaacattatatatgatagaataattatatttgtaatta 13644839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 14101528 - 14101566
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14101528 acacctaaattttcccttaattaaatttaattctttaat 14101566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 14411545 - 14411583
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14411545 acacctaaattttcccttaattaaatttaattctttaat 14411583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 443
Target Start/End: Original strand, 19073170 - 19073256
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaa--cgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| |||||||| |||||||||        |||||||||||||||  | ||| |||||||||||||||||||||| ||||||    
T  19073170 ttaatggacctaaaatggtgattcaataaaaaaaaatgcaacaacaaaaaaacattataaatgatagaataattatatttataatta 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 30846387 - 30846337
Alignment:
Q  394 atgcaacaacaaaaacg-ttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  30846387 atgcaacaacaaaaaatattataaatgatagaataattatatttgtaatta 30846337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 11886804 - 11886760
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||||| | || ||||||||| |||||||||||||||||||    
T  11886804 tgatttcattaaaataattttgttgccataaatgaagaaatatga 11886760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 30846094 - 30846138
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| ||||| | |||||||||||    
T  30846094 tgatttcattcatataattttgttgccataagttaagaaatatga 30846138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 38555317 - 38555273
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||| ||  |||||||||||||||||||    
T  38555317 tgatttcattcatataattttattaccataaatgaagaaatatga 38555273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 8807 - 9056
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  8807 acacctaaaatttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 8906  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| |||        |||||| |||||||||||||||||    
T  8907 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgatttaataaaaaaaaatgcaaaaacaaaaacgttacaaa 9006  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9007 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 9056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 1e-94; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 219 - 466
Target Start/End: Complemental strand, 26494470 - 26494222
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  26494470 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattaatatgattttgttgccataa 26494371  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  26494370 atgaagaaatatgagggatgaataatatctgcaatcggtagttaatggatctaaaatgatgattcaataaaaaaaaatacaacaacaaaaacgttacaaa 26494271  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26494270 tgatagaataattatatttgtaattattagtaattaattttattgatgt 26494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 11270251 - 11270003
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11270251 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgtcataa 11270152  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||        |||||||||||||||||||| |||    
T  11270151 atgaagaaatatgatatatgaataatatctgcaatcggtaattaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttagaaa 11270053  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11270052 ggatagaataattatatttgtaattattagtaattaatttcattgatgtc 11270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 32743287 - 32743535
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  | ||| |||||||||||||||||||||||||||||||||||| |||||    
T  32743287 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattatacataattatttttatgatttcattcatatgattttgttgccataa 32743386  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    || ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||||||||||||||||||    
T  32743387 ataaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaaa 32743485  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32743486 tgatagaataattatatttgtaattattagtaattaatttcattaatgtc 32743535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 20484738 - 20484988
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  20484738 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatataattttgttgtcataa 20484837  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat-nnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    || ||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||||         |||||||||||||||||||||||    
T  20484838 ataaagaaatatgagagatgaataatatctgcaattggtagttaatggacctaaaatgatgattcaataaaaaaaaaatgcaacaacaaaaacgttacaa 20484937  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20484938 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 20484988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 243 - 467
Target Start/End: Original strand, 10658945 - 10659170
Alignment:
Q  243 tttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaata 341  Q
    ||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  10658945 tttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaata 10659044  T
Q  342 atatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaat 441  Q
    |||||| ||||||| |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10659045 atatctacaatcggtagttaatggatctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaat 10659144  T
Q  442 tattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||    
T  10659145 tattagtaattaatttcattgatgtc 10659170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 7941973 - 7941725
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  7941973 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttataatttcattcatatgattttgttgccataa 7941874  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||||| || ||||||||| ||||||||        ||||||||||||||||||||||||    
T  7941873 atgaaaaaatatgagagatgaataatatctccaatcggtagttaattgacctaaaatgacgattcaataaaaaaa-atgcaacaacaaaaacgttacaaa 7941775  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7941774 tgatataataattatatttgtaattattagtaattaatttcattgatgtc 7941725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 39999546 - 39999298
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||| |||||||||||||||||||||||||||||||||||| |||||    
T  39999546 acacctaaattttccttaattaaatttaattctttaatccttttaagaaattatacataattatttttatgatttcattcatatgattttgttgccataa 39999447  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||||||||||||||||||    
T  39999446 atgaagaaatatgagagataaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaca-atgcaacaacaaaaacgttacaaa 39999348  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  39999347 tgatagaataattatatttgtaattatttttaattaatttcgttgatgtc 39999298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 224 - 467
Target Start/End: Original strand, 19842614 - 19842856
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatcttt-taaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    |||||||||||||||||||||||||||||||||| || |||||||  ||||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  19842614 taaattttccttaattaaatttaattctttaatccttgtaaggaattaaacataattatttttatgatttcattcatatgattttgttgcaataaatgaa 19842713  T
Q  323 gaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgata 422  Q
    ||||||||| |||||||||| |||||||||||| |||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||    
T  19842714 gaaatatgagagatgaataaaatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaa--atgcaacaacaaaaacgttacaaatgata 19842811  T
Q  423 gaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
     ||||||||||||||||||||||| ||||||||||||||||||||    
T  19842812 aaataattatatttgtaattattattaattaatttcattgatgtc 19842856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 45075452 - 45075700
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  45075452 acacctaaattttccttgattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttaattcatatgattttgttgccataa 45075551  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||        ||| ||||||||||||||||||||    
T  45075552 atgaagaaatatgagagatgaataatatgtgcaatcggtagttaatggacctaaaatgacgattctataaaaaaaaatg-aacaacaaaaacgttacaaa 45075650  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45075651 tgatagaataattatatttgtaattattagtgattaatttcattgatgtc 45075700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 32592323 - 32592568
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| ||  |||||    || |||||||||||||||||||||||||||||| |||||    
T  32592323 acacctaaattttccttaattaaattcaattctttaatccttttaagcaattaaaca----taattttatgatttcattcatatgattttgttgccataa 32592418  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||||||||||||||  ||||||    
T  32592419 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataacaaaaaatgcaacaacaaaaacactacaaa 32592518  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32592519 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 32592568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 4274917 - 4274668
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||||| ||| |||||||||||||| ||||||| ||||||| ||  ||||  |||| ||||||||||||||||||||||||||||||| |||||    
T  4274917 acacctaaatttccctgaattaaatttaattatttaatccttttaagtaattaaacgtaattctttttatgatttcattcatatgattttgttgtcataa 4274818  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||        ||||||||||||| ||||||||||    
T  4274817 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatgaacctaaaatgatgattcaataaaaaaaaatgcaacaacaaatacgttacaaa 4274718  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4274717 tgatagaataattatatttgtaattattagtaattgatttcattgatgtc 4274668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 227 - 466
Target Start/End: Original strand, 4330952 - 4331188
Alignment:
Q  227 attttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  4330952 attttccttaattaaatttaattctttaatcttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccttaaatgaagaaa 4331051  T
Q  327 tatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaat 426  Q
    ||||| |||||||||||||| |||||||| |||||||||| |||||| |||||||||||        | |   |||||||||||||  ||||||||||||    
T  4331052 tatgagagatgaataatatccgcaatcggtagttaatggacctaaaaagatgattcaataaaaaaaaagg---caacaaaaacgttttaaatgatagaat 4331148  T
Q  427 aattatatttgtaattattagtaattaatttcattgatgt 466  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4331149 aattatatttgtaattattagtaattaatttcattgatgt 4331188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 219 - 371
Target Start/End: Original strand, 6143777 - 6143930
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||  ||||| |||||||||||| |||||||||| |||||||||||| |||||    
T  6143777 acacctaaatttttcttaattaaatttaattatttaatccttttaaggaattaaacataattatttttatcatttcattcagatgattttgttgccataa 6143876  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaa 371  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  6143877 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaa 6143930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 7941279 - 7941323
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  7941279 tgatttcattcatataattttgttgtcataaatgaagaaatatga 7941323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 20485435 - 20485391
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  20485435 tgatttcattcatataattttgttgccataaatgaagaaatatga 20485391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 30294776 - 30294732
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  30294776 tgatttcattcatataattttgttgtcataaatgaagaaatatga 30294732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 443
Target Start/End: Original strand, 32592688 - 32592773
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaa-aaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| ||||||||||||||||||        |||||||||||| |||| ||| |||||||||||||||||||||| ||||||    
T  32592688 ttaatggacctaaaatgatgattcaataaaaaaaaatgcaacaacaataaacattataaatgatagaataattatatttataatta 32592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 32593016 - 32592972
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  32593016 tgatttcattcatataattttgttgccataaatgaagaaatatga 32592972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 51755754 - 51755710
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  51755754 tgatttcattcatataattttgttgtcataaatgaagaaatatga 51755710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 4274517 - 4274467
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  4274517 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 4274467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 30294550 - 30294600
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  30294550 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 30294600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 4274229 - 4274273
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||    
T  4274229 tgatttcagtcatataattttgttgtcataaatgaagaaatatga 4274273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 26493723 - 26493767
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  26493723 tgattttattcatataattttgttgccataaatgaagaaatatga 26493767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 26494080 - 26493995
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| |||||||| |||||||||        ||||||||||||||| | ||| | |||||||||||||||||||||||||||    
T  26494080 ttaatggacctaaaatggtgattcaataaaaaaaaatgcaacaacaaaaaacattatatatgatagaataattatatttgtaatta 26493995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 34722375 - 34722411
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34722375 atatttgtaattatttgtaattaatttcattgatgtc 34722411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 45076151 - 45076107
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  45076151 tgatttcattcatataattttgttgccataaattaagaaatatga 45076107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 45075870 - 45075909
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  45075870 aaaaacattataaatgatagaataattatatttgtaatta 45075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 7941570 - 7941520
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| ||||||    
T  7941570 atgcaacaacaaaaaacattataaatgatagaataattatatttataatta 7941520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 20485142 - 20485192
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||| ||||||||||||||||||||    
T  20485142 atgcaacaacaaaaaacattataaatgatataataattatatttgtaatta 20485192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 26493660 - 26493698
Alignment:
Q  219 acacctaaattttcctt-aattaaatttaattctttaat 256  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  26493660 acacctaaattttcctttaattaaatttaattctttaat 26493698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 19842553 - 19842606
Alignment:
Q  136 gaaaatttcgacaattaactgacaggaatttcaaatttgaaattaaataaggaa 189  Q
    ||||| ||||||| ||||||| | |||||||||||  |||||||||||||||||    
T  19842553 gaaaacttcgacagttaactgccgggaatttcaaacatgaaattaaataaggaa 19842606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 2062522 - 2062558
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  2062522 atatttgtatttatttgtaattaatttcattgatgtc 2062558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 6525275 - 6525247
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  6525275 ttttccttaattaaatttaattctttaat 6525247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 7941216 - 7941252
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7941216 acacctaaattttcccttaattaaatttaattcttta 7941252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 20485498 - 20485462
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20485498 acacctaaattttcccttaattaaatttaattcttta 20485462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 31890164 - 31890128
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||| |||||||| |||||||||||||||||||||    
T  31890164 atatttataattatttgtaattaatttcattgatgtc 31890128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 31890199 - 31890171
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  31890199 ttttccttaattaaatttaattctttaat 31890171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 34722340 - 34722368
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  34722340 ttttccttaattaaatttaattctttaat 34722368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 45076216 - 45076180
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45076216 acacctaaattttcccttaattaaatttaattcttta 45076180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 5e-91; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 41622253 - 41622503
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  41622253 acacctaaatttttcttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 41622352  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat-nnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||         |||||||||||||||||||||||    
T  41622353 atgaagaaatgtgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaaaaatgcaacaacaaaaacgttacaa 41622452  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41622453 atgatataataattatatttgtaattattagtaattaatttcattgatgtc 41622503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 219 - 466
Target Start/End: Complemental strand, 35282361 - 35282114
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  35282361 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataatcatttttatgatttcattcatatgattttgttgccataa 35282262  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||  |||||||||||||||||        |||||||||||||||||||| |||    
T  35282261 atgaagaaatatgagagatgaataatatctgcaatcggtaattaatggacataaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttagaaa 35282163  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35282162 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 35282114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 236 - 467
Target Start/End: Complemental strand, 20743938 - 20743705
Alignment:
Q  236 aattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatag 334  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||    
T  20743938 aattaaatttaattctttaatccttttaaggaattaaacataattatttttacgatttcattcatatgattttgttgccataaatgaagaaatatgagag 20743839  T
Q  335 atgaataatatctgcaatcggcagttaat-ggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattata 433  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  20743838 atgaataatatctgcaatcggtagttaatgggacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttacaaatgatagaataattata 20743739  T
Q  434 tttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||| ||||||||||||||||||||    
T  20743738 tttgtaattattattaattaatttcattgatgtc 20743705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 219 - 457
Target Start/End: Complemental strand, 2170537 - 2170298
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||  ||| || ||||||||||||||||||||| ||||||| ||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2170537 acacctaaaaattctttgattaaatttaattctttaatccttttaagaaattaaacataattatttttatgatttcattcatatgattttgttgtcataa 2170438  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||| |||||||| |||||||||||||||| |||||| |||||||| | ||||||||||||||||||        ||||||||||||||||||||||||    
T  2170437 atgaaaaaatatgagagatgaataatatctgtaatcggtagttaatgaacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttacaaa 2170338  T
Q  418 tgatagaataattatatttgtaattattagtaattaattt 457  Q
     |||||||||||||||||||||||||||||||||||||||    
T  2170337 cgatagaataattatatttgtaattattagtaattaattt 2170298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 35671188 - 35671437
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  35671188 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgatttttttgccataa 35671287  T
Q  318 atg-aagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    ||| || |||||||| |||||||||||||||||||| |  |||||||||| ||||||||||||||||||        |||||||||||||||| ||||||    
T  35671288 atgaaaaaaatatgagagatgaataatatctgcaattgatagttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaactttacaa 35671386  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||| ||||||||||||  ||| ||||||||||||||||||||||||||    
T  35671387 atgataaaataattatattgataactattagtaattaatttcattgatgtc 35671437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 225 - 443
Target Start/End: Original strand, 30192604 - 30192824
Alignment:
Q  225 aaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaag 323  Q
    |||||||| |||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||     
T  30192604 aaattttctttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgtcataaatgaaa 30192703  T
Q  324 aaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaac-aaaaacgttacaaatgata 422  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||        |||||||||| |||||| ||| ||||||||    
T  30192704 aaatatgagagatgaataatatcagcaatcggtagttaatggatctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaaacattataaatgata 30192803  T
Q  423 gaataattatatttgtaatta 443  Q
    |||||||||||||||||||||    
T  30192804 gaataattatatttgtaatta 30192824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 219 - 385
Target Start/End: Complemental strand, 42912845 - 42912677
Alignment:
Q  219 acacctaaattttccttaattaaatttaatt-ctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata 316  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  42912845 acacctaaattttccttaatttaatttaatttctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccata 42912746  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    |||||| |||||||||||||||||||||||||||||| | | |||||||| ||||||||||||||||||    
T  42912745 aatgaaaaaatatgatagatgaataatatctgcaatcagtaattaatggacctaaaatgatgattcaat 42912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 2169854 - 2169898
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  2169854 tgatttcattcatataattttgttgccataaatgaagaaatatga 2169898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 20743981 - 20743937
Alignment:
Q  224 taaattttccttaattaaatttaattctttaat-cttttaaggaa 267  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  20743981 taaattttccttaattaaatttaattctttaatccttttaaggaa 20743937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 13590594 - 13590537
Alignment:
Q  228 ttttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatttt 284  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||| |||| ||||    
T  13590594 ttttccttaattaaatttaattctttaatccttttaaggaattaaacataattttttt 13590537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 13580672 - 13580712
Alignment:
Q  228 ttttccttaattaaatttaattctttaat-cttttaaggaa 267  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  13580672 ttttccttaattaaatttaattctttaatccttttaaggaa 13580712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 40789112 - 40789068
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||    
T  40789112 tgatttcattcatataattttgttaccataaatgaagaaatatga 40789068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 13590430 - 13590395
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaa 322  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13590430 tgatttcattcatatgattttgttgccataaatgaa 13590395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 40789335 - 40789289
Alignment:
Q  80 gttgacacatttggtttgattgataaac--gagtaaattattcaaat 124  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||    
T  40789335 gttgacacatttggtttgattgagaaacatgagtaaattattcaaat 40789289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 20743554 - 20743504
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||  |||||||||||||||||||||||||||||    
T  20743554 atgcaacaacaaaaaacattttaaatgatagaataattatatttgtaatta 20743504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 35671672 - 35671718
Alignment:
Q  394 atgcaacaacaaa-aacgttacaaatgatagaataattatatttgta 439  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  35671672 atgcaacaacaaataacattataaatgatagaataattatatttgta 35671718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 35671998 - 35671960
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35671998 acacctaaattttcccttaattaaatttaattctttaat 35671960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 40789174 - 40789136
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40789174 acacctaaattttcccttaattaaatttaattctttaat 40789136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Original strand, 13589738 - 13589771
Alignment:
Q  434 tttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||| |||||||||||||||||||||    
T  13589738 tttgtaattatttgtaattaatttcattgatgtc 13589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 2170138 - 2170102
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaa 440  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  2170138 aaaaacattataaatgatagaataattatatttgtaa 2170102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 30966240 - 30966276
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||  ||||||||||||||||||||    
T  30966240 atatttgtaattatttataattaatttcattgatgtc 30966276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 30966601 - 30966573
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  30966601 ttttccttaattaaatttaattctttaat 30966573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 35671935 - 35671891
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||| ||| ||||| ||| |||||||||||||||||||    
T  35671935 tgatttcattcgtataattttattgccataaatgaagaaatatga 35671891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 41622952 - 41622908
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||| ||||| |||||||||||| ||||||    
T  41622952 tgatttcattcatataattgtgttgtcataaatgaagatatatga 41622908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 5e-91; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 37296178 - 37295927
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctttt-aaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  37296178 acacctaaattttccttaattaaatttaattctttaatctttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 37296079  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcag---ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttac 414  Q
    |||||||||||||| ||||||||||||||||||||||| ||   |||||||| ||||||||||||||||||        ||||||||||||||||||||     
T  37296078 atgaagaaatatgagagatgaataatatctgcaatcggtagtaattaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttag 37295980  T
Q  415 aaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37295979 aaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 37295927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 48807353 - 48807105
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc--ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata 316  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| ||  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  48807353 acacctaaattttccttaattaaatttaattctttaatcctttttaagaaattaaacataattatttttatgatttcattcatatgattttgttgccata 48807254  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||        |||||||||||||||||||||||    
T  48807253 aatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgataattcaataaaaaa--atgcaacaacaaaaacgttacaa 48807156  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  48807155 atgatagaataattatatttttaattattaataattaatttcattgatgtc 48807105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 219 - 466
Target Start/End: Original strand, 37855939 - 37856186
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||| |||||||| ||||||||| |||||    
T  37855939 acacctaaactttccttaattaaatttaattctttaatcattttaaggaattaaacataattatttttatgattttattcatattattttgttgccataa 37856038  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||| || |||||||||||||| |||        ||||||||||||||||||||||||    
T  37856039 atgaagaaatatgagagatgaataatatctgcaatccgtagttaatagacctaaaatgatgatttaataaaaaaa-atgcaacaacaaaaacgttacaaa 37856137  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37856138 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 37856186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 219 - 464
Target Start/End: Original strand, 43175813 - 43176051
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  43175813 acacctaaattttccttaattaaatttaattctttaatcattttaaggaattaaacataattattattatgatttcattcatatgattttgttgccataa 43175912  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    || |||| |||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||        ||||||||||||||||||||||      
T  43175913 ataaagatatatgagagatgaataatatctgcaatcggtagttaatggacctaaagtgatgattcaataaaagtaaatgcaacaacaaaaacgttaca-- 43176010  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgat 464  Q
          |||||||||||||||||||||||||||||||||||||||||    
T  43176011 ------aataattatatttgtaattattagtaattaatttcattgat 43176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 270 - 467
Target Start/End: Complemental strand, 28235198 - 28235005
Alignment:
Q  270 aaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  28235198 aaacataattatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacct 28235099  T
Q  370 aaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||        |||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28235098 aaaatgatgattcaataaaaaaa-atg---caacaaaaacgtttcaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 28235005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 222 - 467
Target Start/End: Original strand, 11565975 - 11566207
Alignment:
Q  222 cctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatg 320  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||              ||||| ||||||||    
T  11565975 cctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacaaaattatttttatgattt--------------tgttgccataaatg 11566060  T
Q  321 aagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatga 420  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||  |||||||||| |||||||        ||||||||| |||||||||||||||||    
T  11566061 aagaaatatgagagatgaataatatctgcaatctgtagttaatgggcctaaaatgattattcaataaaaaaaaatgcaacaataaaaacgttacaaatga 11566160  T
Q  421 tagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11566161 tagaataattatatttgtaattattagtaattaatttcattgatgtc 11566207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 219 - 443
Target Start/End: Complemental strand, 2449579 - 2449354
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2449579 acacctaaattttccttaattaaatttaattctttaatccttttaagaaattaaacataattatttttatgatttcattcatatgattttgttgtcataa 2449480  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaac-aaaaacgttacaa 416  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||||        |||||| ||| |||||| ||| ||    
T  2449479 atgaagaaatatgagagatgaataatatctgcaatcagtagttaattgacctaaaatgatgattcaataaaaaaa-atgcaaaaacaaaaaacattataa 2449381  T
Q  417 atgatagaataattatatttgtaatta 443  Q
    |||||| ||||||||||||||||||||    
T  2449380 atgatataataattatatttgtaatta 2449354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 270 - 467
Target Start/End: Complemental strand, 16473195 - 16473003
Alignment:
Q  270 aaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  16473195 aaacataattatttttatgatttcattcatatgattttgttgccataaataaagaaatatgagagatgaataatatctgcaatcggtagttaatggacct 16473096  T
Q  370 aaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||        |||   ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16473095 aaaatgatgattcaataaaaaa--atg---caacaaaaacgtttctaatgatagaataattatatttgtcattattagtaattaatttcattgatgtc 16473003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 18884471 - 18884362
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctttt-aaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  18884471 acacctaaattttccttaattaaatttaattatttaatctttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 18884372  T
Q  318 atgaagaaat 327  Q
    ||||||||||    
T  18884371 atgaagaaat 18884362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 7088530 - 7088417
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttaca-----aatgatagaataattatatttgtaattattagtaatta 453  Q
    ||||||||||||||||| |||||||||       ||||||||||||||||||||||      ||||||||||||||||||||||||||||||| ||||||    
T  7088530 ttaatggatctaaaatggtgattcaataaaaaaatatgcaacaacaaaaacgttacgttgcgaatgatagaataattatatttgtaattattaataatta 7088431  T
Q  454 atttcattgatgtc 467  Q
    |||||||| |||||    
T  7088430 atttcattaatgtc 7088417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 43176532 - 43176486
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatgata 333  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  43176532 tgatttcattcatataattttgttgccataaatgaagaaatatgata 43176486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 6092659 - 6092615
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  6092659 tgatttcattcatataattttgttgccataaatgaagaaatatga 6092615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 48806654 - 48806698
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  48806654 tgatttcattcatataattttgttgccataaatgaagaaatatga 48806698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 48806949 - 48806899
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  48806949 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 48806899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 43493027 - 43493063
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||    
T  43493027 atatttgtaattatttgtaattaatttcattgatgtc 43493063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 6092382 - 6092421
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  6092382 aaaaacattataaatgatagaataattatatttgtaatta 6092421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 27872462 - 27872492
Alignment:
Q  219 acacctaaattttccttaattaaatttaatt 249  Q
    |||||||||||||||||||||||||||||||    
T  27872462 acacctaaattttccttaattaaatttaatt 27872492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 37856359 - 37856409
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| |  || |||||||||||||||||||||||||||||    
T  37856359 atgcaacaacaaaaaacaatataaatgatagaataattatatttgtaatta 37856409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 2449056 - 2449092
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2449056 acacctaaattttcccttaattaaatttaattcttta 2449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 28235261 - 28235289
Alignment:
Q  277 attatttttatgatttcattcatatgatt 305  Q
    |||||||||||||||||||||||||||||    
T  28235261 attatttttatgatttcattcatatgatt 28235289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 43176595 - 43176559
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  43176595 acacctaaattttcccttaattaaatttaattcttta 43176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 43492992 - 43493020
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  43492992 ttttccttaattaaatttaattctttaat 43493020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 48806591 - 48806627
Alignment:
Q  219 acacctaaatttt-ccttaattaaatttaattcttta 254  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48806591 acacctaaatttttccttaattaaatttaattcttta 48806627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 53536801 - 53536765
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  53536801 atatttgtatttatttgtaattaatttcattgatgtc 53536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 219 - 464
Target Start/End: Original strand, 28138686 - 28138931
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttt-tatgatttcattcatatgattttgttgacata 316  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  28138686 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattattttttatgatttcattcatatgattttgttgccata 28138785  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||||||| |||        |||||||||||||||||||||||    
T  28138786 aatgaagaaatatgagagatgaataatatctgcaattggtagttaatggacctaaaatgatgatttaataaaaaa--atgcaacaacaaaaacgttacaa 28138883  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgat 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28138884 atgatagaataattatatttgtaattattagtaattaatttcattgat 28138931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 14002599 - 14002847
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  14002599 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaatataattatttttatgatttcattcatatgattt-gttgccataa 14002697  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| |||||||||||||||||||| || |||||||| | ||||||||||||||||||        |||||||||||||||||||| |||    
T  14002698 atgaagaaatatgagagatgaataatatctgcaataggtagttaatgaacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttataaa 14002797  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14002798 tgatagaataattatatttgtaatcattagtaattaatttcattgatgtc 14002847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 224 - 463
Target Start/End: Complemental strand, 2271699 - 2271462
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||  ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2271699 taaattttccttaattaaatttaattctt-aatcattttaaggaattaaacataattatttttatgatttctttcatatgattttgttgccataaatgaa 2271601  T
Q  323 gaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgata 422  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||    
T  2271600 gaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaa--atgcaacaacaaaaacgttacaaatgata 2271503  T
Q  423 gaataattatatttgtaattattagtaattaatttcattga 463  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  2271502 gaataattatatttgtaattattattaattaatttcattga 2271462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 37322104 - 37321859
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  37322104 acacctaaattttccttaattaaatttaattctttaatccttttaaggaaataaacataataatttttatgatttcattcatatgattttgttgccataa 37322005  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||| ||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||        |||   ||||||||| ||| ||||    
T  37322004 atgaaaaaatatgagtgatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-atg---caacaaaaatgtttcaaa 37321909  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321908 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 226 - 467
Target Start/End: Original strand, 40156622 - 40156859
Alignment:
Q  226 aattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaaga 324  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  40156622 aattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccttaaatgaaga 40156721  T
Q  325 aatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgataga 424  Q
    ||||||| ||||||||||||||||||||||| |||||||| | || ||||||||||||||         |||   ||||||||||||| |||||||||||    
T  40156722 aatatgagagatgaataatatctgcaatcggtagttaatgaacctgaaatgatgattcaa--aaaaaaaatg---caacaaaaacgtttcaaatgataga 40156816  T
Q  425 ataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40156817 ataattatatttgtaattattagtaattaatttcattgatgtc 40156859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 276 - 467
Target Start/End: Complemental strand, 23266153 - 23265961
Alignment:
Q  276 aattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatg 375  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  23266153 aattatttttatgatttcatttatatgattttgttgccataaatgaagaaatataagagatgaataatatctgcaatcggtagttaatggatctaaaatg 23266054  T
Q  376 atgattcaat-nnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23266053 atgattcaataaaaaaaaaatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 23265961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 29407854 - 29407587
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata- 316  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||| |||||||||||||||||||||||||| ||||     
T  29407854 acacctaaattttccttaattaaatttaattctttaattcttttaaggaattaaacataattattttaatgatttcattcatatgattttgttgccatat 29407755  T
Q  317 -----------------aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaa 399  Q
                     ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        | ||||    
T  29407754 atgattttgttgccataaatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaatcaaaaaaaaggcaa 29407655  T
Q  400 caacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29407654 caacaaaaacgttacaaatgaaagaataattatatttgtaattattagtaattaatttcattgatgtc 29407587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 270 - 466
Target Start/End: Original strand, 6232766 - 6232959
Alignment:
Q  270 aaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  6232766 aaacataattatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacct 6232865  T
Q  370 aaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    ||||||||||||||||        |||    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6232866 aaaatgatgattcaataaagaaaaatg---taacaaaaacgtttcaaatgatagaataattatatttgtaattattagtaattaatttaattgatgt 6232959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 28419513 - 28419681
Alignment:
Q  219 acacctaaattttccttaattaaatttaatt-ctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata 316  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  28419513 acacctaaattttccttaattaaatttaatttctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccata 28419612  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    |||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  28419613 aatgaaaaaatatgatagatgaataatatctgcaatcggtaattaatggacctaaaatgatgattcaat 28419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 385
Target Start/End: Complemental strand, 12252459 - 12252292
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| | |||||||||||||||||||||||||||||||||| |||||    
T  12252459 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacatagttatttttatgatttcattcatatgattttgttgccataa 12252360  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||| || ||||||||||||||||||    
T  12252359 atgaagaaatatgagagatgaataatatctacaatcggtagttaattgacctaaaatgatgattcaat 12252292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 345
Target Start/End: Original strand, 33222722 - 33222849
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  33222722 acacctaaattttccttaattaaatttaattcattaatccttttaaggaattaaacataattatttttatgatttcaatcatatgattttgttgccataa 33222821  T
Q  318 atgaagaaatatgatagatgaataatat 345  Q
    |||||||||||||| |||||||||||||    
T  33222822 atgaagaaatatgagagatgaataatat 33222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 467
Target Start/End: Complemental strand, 23261022 - 23260955
Alignment:
Q  400 caacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23261022 caacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 23260955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 37294861 - 37294787
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat-cttttaaggaaccaaacaaaattatttttatgattt 292  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  37294861 acacctaaatttttcttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgattt 37294787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 14003002 - 14003067
Alignment:
Q  395 tgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaattattagtaattaatttca 459  Q
    |||||||||||||| | ||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  14003002 tgcaacaacaaaaaacattataaatgataaaataattatatttataattattagtaattaatttca 14003067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 2271339 - 2271254
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| ||||||||||||||||||        ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  2271339 ttaatggacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 2271254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 16544544 - 16544503
Alignment:
Q  282 ttttatgatttcattcatatgattttgttgacataaatgaag 323  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16544544 ttttatgatttcattcatatgattttgttgtcataaatgaag 16544503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 1728933 - 1728977
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  1728933 tgatttcattcatataattttgttgtcataaatgaagaaatatga 1728977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 23260838 - 23260754
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaa-aaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| ||||||||||||||||||        |||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  23260838 ttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaagaaacattataaatgatagaataattatatttgtaatta 23260754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 23265844 - 23265760
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaa-aaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| ||||||||||||||||||        |||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  23265844 ttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaagaaacattataaatgatagaataattatatttgtaatta 23265760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 29407142 - 29407186
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  29407142 tgatttcattcatataattttgttgccataaatgaagaaatatga 29407186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 16544584 - 16544546
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc 257  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16544584 acacctaaattttccttaattaaatttaattccttaatc 16544546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 23260514 - 23260560
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatgata 333  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||||    
T  23260514 tgatttgattcatataattttgttgccataaatgaagaaatatgata 23260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 37294501 - 37294543
Alignment:
Q  289 atttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  37294501 atttcattcatataattttgttgccataaatgaagaaatatga 37294543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 23266196 - 23266159
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat 256  Q
    |||| |||||||||||||||||||||||||||||||||    
T  23266196 acacttaaattttccttaattaaatttaattctttaat 23266159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 28139460 - 28139416
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  28139460 tgattttattcatataattttgttgccataaatgaagaaatatga 28139416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 1729224 - 1729185
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  1729224 aaaaacattataaatgatagaataattatatttgtaatta 1729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 28139523 - 28139485
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28139523 acacctaaattttcccttaattaaatttaattctttaat 28139485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 37294435 - 37294473
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37294435 acacctaaattttcccttaattaaatttaattctttaat 37294473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 37893322 - 37893289
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgat 464  Q
    ||||||||||||||| ||||||||||||||||||    
T  37893322 atatttgtaattatttgtaattaatttcattgat 37893289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 29407079 - 29407115
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  29407079 acacctaaattttcccttaattaaatttaattcttta 29407115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 29601093 - 29601057
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29601093 atatttgtatttatttgtaattaatttcattgatgtc 29601057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 30271189 - 30271217
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  30271189 ttttccttaattaaatttaattctttaat 30271217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 30273073 - 30273037
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  30273073 atatttgtaattatttgtatttaatttcattgatgtc 30273037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 30273108 - 30273080
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  30273108 ttttccttaattaaatttaattctttaat 30273080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 33661906 - 33661934
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  33661906 ttttccttaattaaatttaattctttaat 33661934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 37893357 - 37893329
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  37893357 ttttccttaattaaatttaattctttaat 37893329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 1e-88; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 37656017 - 37656266
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctttt-aaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  37656017 acacctaaatttttcttaattaaatttaaatctttaatctttttaaggaattaaacataattatttttatgatttcattcgtatgattttgttgccataa 37656116  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatga-ttcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||        |||||||||||||||||||||||    
T  37656117 atgaagaaatatgaaagatgaataatatctgcaatcggtagttaatggacctaaaatgatgatttcaataaaaaaa-atgcaacaacaaaaacgttacaa 37656215  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37656216 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 37656266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 16940243 - 16939995
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| | |||||||||||||||||||||||||||||||||||| |||||    
T  16940243 acacctaaattttccttaattaaatttaattctttaatcattttaaggaattaaaaataattatttttatgatttcattcatatgattttgttgccataa 16940144  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  16940143 atgaagaaatatgagagatgaataatatctacaatcgatagttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaatgttacaaa 16940045  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16940044 tgataaaataattatatttgtaattattagtaattaatttcattgatgtc 16939995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 35206627 - 35206378
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||| |||| |||||||||||| |||||||||||||||||| |||||    
T  35206627 acacctaaatttttcttaattaaatttaattctttaatccttttaaggaattaaacataattctttttatgattttattcatatgattttgttgccataa 35206528  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||| ||||||||||||||||||        ||||||||||||||||||||||||    
T  35206527 atgaagaaatatgagagatgaataatatctgcaatccatagttaatggacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttacaaa 35206428  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35206427 tgatagaataattatatttgtaattattagtaattaattttattgatgtc 35206378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 224 - 467
Target Start/End: Original strand, 13782346 - 13782589
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||    
T  13782346 taaattttccttaattaaatttaattctttaatcattttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataaataaa 13782445  T
Q  323 gaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgata 422  Q
    ||||||||||||||||||||||||||||||| |  |||||| |||||||||||||||||||||        |||||||||||||||||||||||| ||||    
T  13782446 gaaatatgatagatgaataatatctgcaatcagtggttaatagatctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaaacgata 13782544  T
Q  423 gaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  13782545 taataattatatttgtaattattagtaattaatttcattgatgtc 13782589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 219 - 466
Target Start/End: Original strand, 3085621 - 3085870
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  3085621 acacctaaattttccttaattaaatttaattctttaatccttttaagaaattaaacataattatttttataatttcattcatatgattttgttgccataa 3085720  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat-nnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||| |||         |||||||||||||||||||| ||    
T  3085721 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacttaaaatgatgatttaatacaaaaaaaatgcaacaacaaaaacgttataa 3085820  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3085821 atgatagaataattatatttgtaattattagtaattaatttcattgatgt 3085870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 224 - 461
Target Start/End: Original strand, 41471203 - 41471440
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41471203 taaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataaatgaa 41471302  T
Q  323 gaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgata 422  Q
    ||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||        |||||||||||||||||||||||| ||||    
T  41471303 gaaatatgagagatgaataatatctgcaatcggtagttaatagacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaaacgata 41471401  T
Q  423 gaataattatatttgtaattattagtaattaatttcatt 461  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  41471402 gaataattatatttgtaattattattaattcatttcatt 41471440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 219 - 468
Target Start/End: Complemental strand, 22961471 - 22961224
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaa 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  22961471 acacctaaattttccttaattaaatttaattctttaaccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgctataaa 22961372  T
Q  319 tgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaat 418  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||| ||||        ||||||||||| ||| |||||||||    
T  22961371 tgaagaaatatgagagatgaataatatctgcaat-ggtagttaatggacctaaaatgatgatgcaataaaaaaa-atgcaacaacagaaatgttacaaat 22961274  T
Q  419 gatagaataattatatttgtaattattagtaattaatttcattgatgtcc 468  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  22961273 gatagaataaatatatttgtaattattaataattaatttcattgatgtcc 22961224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 39208385 - 39208138
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||| |||||||||  ||||    
T  39208385 acacctaaattttccttaattaaatataattctttaatccttttaaggaattaaacataattatttttatgatttcattcatataattttgttgcaataa 39208286  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  39208285 atgaagaaatataagagatgaataatatctgcaatcggtagttaatggatctaaaatgatgattcaataaaaaa--atgcaacaacaaaaacgttacaaa 39208188  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||| |||| |||||||||| ||| |||||||||||||||    
T  39208187 tgatagaataattaaatttataattattagcaatcaatttcattgatgtc 39208138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 219 - 466
Target Start/End: Complemental strand, 36595913 - 36595665
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctttt-aaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || |||  ||||| |||||||||| ||||||||||| ||||||||||||| |||||    
T  36595913 acacctaaattttcgttaatttaatttaattctttaatctttttaatgaattaaacataattatttttgtgatttcattcgtatgattttgttgtcataa 36595814  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||| |||||        ||| ||||||||||||||||||||    
T  36595813 atgaagaaatatgagagatgaataatatctgcaatcgttagttaatggacctaaaatgatgagtcaataaaaaaaaatgtaacaacaaaaacgttacaaa 36595714  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36595713 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 36595665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 219 - 444
Target Start/End: Complemental strand, 36345898 - 36345677
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  36345898 acacctaaattttccttaattaaatttaattctttaatcttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataaa 36345799  T
Q  319 tgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaat 418  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        |||   |||||||||||||||||||    
T  36345798 tgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-atg---caacaaaaacgttacaaat 36345703  T
Q  419 gatagaataattatatttgtaattat 444  Q
    ||||||||||||||||||||||||||    
T  36345702 gatagaataattatatttgtaattat 36345677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 257 - 467
Target Start/End: Original strand, 34892063 - 34892273
Alignment:
Q  257 cttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggc 356  Q
    |||||||||||  ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||     
T  34892063 cttttaaggaattaaacataattatttttatgattccattcatatgattttgttgccataaatgaagaaatataagagatgaataatatctgcaatcggt 34892162  T
Q  357 agttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatt 456  Q
    |||||||||| ||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34892163 agttaatggacctaaaatgatgattcaataaaaaaaaatgcaacaacaaaaacgttacaaataatagaataattatatttgtaattattagtaattaatt 34892262  T
Q  457 tcattgatgtc 467  Q
    |||||||||||    
T  34892263 tcattgatgtc 34892273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 38134105 - 38133865
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaa 318  Q
    |||| ||||||||||||||||||||||||||||||       |||| ||  | ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  38134105 acacataaattttccttaattaaatttaattcttt-------taagaaattatacataattatttttatgatttcattcatatgattttgttgtcataaa 38134013  T
Q  319 tgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaat 418  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||        |||||||||||||||||||||||||    
T  38134012 tgaagaaatatgagagatgaataatatctgcaatcggtagttaatgaacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaaat 38133914  T
Q  419 gatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38133913 gatagaataattatatttgtaattattagtaactaatttcattgatgtc 38133865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 224 - 467
Target Start/End: Complemental strand, 43520738 - 43520501
Alignment:
Q  224 taaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaa 322  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||  ||||| ||||||||| |||||||     |||||||||||||| ||||||||||    
T  43520738 taaatttttcttaattaaatttaattctttaatccttttaaggaattaaacataattattttaatgattt-----atatgattttgttgtcataaatgaa 43520644  T
Q  323 gaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgata 422  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        |||||||||||||||||||| ||||||||    
T  43520643 gaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaa--atgcaacaacaaaaacgttaaaaatgata 43520546  T
Q  423 gaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  43520545 gaataattatatttgtaattattattaattaatttcattgatgtc 43520501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 39513180 - 39512934
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctttt-aaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||  ||||| |||||||| ||||||||||||  ||||||||||||| |||||    
T  39513180 acacctatatttttcttaattaaatttaattctttaatctttttaaggaattaaacataattatttctatgatttcatttctatgattttgttgccataa 39513081  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||||||| |||| |   ||||||||| ||||||||| |||||||||| ||||||||||||||||||        | || |||||||||||||||||||    
T  39513080 atgaagaaacatgaga---gaataatatatgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaaaaagccacaacaaaaacgttacaaa 39512984  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39512983 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 39512934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 7121753 - 7121519
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  7121753 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 7121654  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||        |||||||||||||||||||||||     
T  7121653 atgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaa- 7121556  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
                 |||||||||||||||||||||||||||||||||||||    
T  7121555 -------------atatttgtaattattagtaattaatttcattgatgtc 7121519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 276 - 467
Target Start/End: Original strand, 45410270 - 45410458
Alignment:
Q  276 aattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatg 375  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||    
T  45410270 aattatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaataatatttgcaatcggtagttaatggacctaaaatg 45410369  T
Q  376 atgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||        |||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45410370 atgattcaataaaaaaaaatg---caacaaaaacgtttcaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 45410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 3086398 - 3086361
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaat 256  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3086398 acacctaaattttccttaattaaatttaattctttaat 3086361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 7121069 - 7121113
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  7121069 tgatttcattcatataattttgttgtcataaatgaagaaatatga 7121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 34892723 - 34892679
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  34892723 tgatttcattcatataattttgttgtcataaatgaagaaatatga 34892679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 39512483 - 39512527
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  39512483 tgatttcattcatataattttgttgtcataaatgaagaaatatga 39512527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 40741075 - 40741119
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  40741075 tgatttcattcatataattttgttgtcataaatgaagaaatatga 40741119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 7121361 - 7121311
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  7121361 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 7121311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 13782744 - 13782794
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  13782744 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 13782794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 39512781 - 39512731
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  39512781 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 39512731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 40741666 - 40741616
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  40741666 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 40741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 3641796 - 3641832
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3641796 atatttgtaattatttgtaattaatttcattgatgtc 3641832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 16939549 - 16939593
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  16939549 tgattttattcatataattttgttgccataaatgaagaaatatga 16939593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 36595196 - 36595240
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||    
T  36595196 tgatttcattcatataattttgttaccataaatgaagaaatatga 36595240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 36595528 - 36595443
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||| |||||||||| |||||||||        ||||||||||||||| | ||| ||| |||||||||||||||||||||||||    
T  36595528 ttaatgaatctaaaatggtgattcaataaaaaaaaatgcaacaacaaaaaacattataaacgatagaataattatatttgtaatta 36595443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 37656710 - 37656666
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||||||| || ||||||||| |||||||||||||||||||    
T  37656710 tgatttcattcacataattttgttgccataaatgaagaaatatga 37656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 39207805 - 39207849
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||    
T  39207805 tgatttcattcatataatttcgttgtcataaatgaagaaatatga 39207849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 443
Target Start/End: Original strand, 41471589 - 41471674
Alignment:
Q  359 ttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||| |||||||| |||||||||        ||||||||||||||| | ||| | |||||||||||||||||||||||||||    
T  41471589 ttaatggacctaaaatggtgattcaataaaaaaagatgcaacaacaaaaaacattatatatgatagaataattatatttgtaatta 41471674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 41471940 - 41471896
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  41471940 tgattttattcatataattttgttgccataaatgaagaaatatga 41471896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 43520335 - 43520296
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  43520335 aaaaacattataaatgatagaataattatatttgtaatta 43520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 7121006 - 7121044
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7121006 acacctaaattttcccttaattaaatttaattctttaat 7121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 16939840 - 16939790
Alignment:
Q  394 atgcaacaacaaaaacg-ttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  16939840 atgcaacaacaaaaaatattataaatgatagaataattatatttgtaatta 16939790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 22961072 - 22961022
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||| ||||||||||||    
T  22961072 atgcaacaacaaaaaacattataaatgatagaataattgtatttgtaatta 22961022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 35205920 - 35205958
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35205920 acacctaaattttcccttaattaaatttaattctttaat 35205958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 41472003 - 41471965
Alignment:
Q  219 acacctaaatttt-ccttaattaaatttaattctttaat 256  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  41472003 acacctaaatttttccttaattaaatttaattctttaat 41471965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 3086333 - 3086297
Alignment:
Q  291 ttcattcatatgattttgttgacataaatgaagaaat 327  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  3086333 ttcattcatataattttgttggcataaatgaagaaat 3086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 3086453 - 3086401
Alignment:
Q  138 aaatttcgacaattaactgac-aggaatttcaaatttgaaattaaataaggaa 189  Q
    |||||||| || ||||||| | |||||||||||| ||||||||||||||||||    
T  3086453 aaatttcggcagttaactgccgaggaatttcaaacttgaaattaaataaggaa 3086401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 3641761 - 3641789
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  3641761 ttttccttaattaaatttaattctttaat 3641789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 13783075 - 13783039
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13783075 acacctaaattttcccttaattaaatttaattcttta 13783039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 20861825 - 20861789
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  20861825 atatttgtatttatttgtaattaatttcattgatgtc 20861789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 20861860 - 20861832
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  20861860 ttttccttaattaaatttaattctttaat 20861832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 37656773 - 37656737
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37656773 acacctaaattttcccttaattaaatttaattcttta 37656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 40741012 - 40741048
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattcttta 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40741012 acacctaaattttcccttaattaaatttaattcttta 40741048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 44885840 - 44885876
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  44885840 atatttgtatttatttgtaattaatttcattgatgtc 44885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 2e-87; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 219 - 466
Target Start/End: Original strand, 7943048 - 7943295
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  7943048 acacctaaattttccttaattaaatttaattctgtaatccttttaaagaattaaacataattatttttatgatttcattcatatgattttgttgccataa 7943147  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||||        |||||||||||| |||||||||||    
T  7943148 atgaaaaaatatgagagatgaataatatctgcaatcggtagttaatggacttaaaatgatgattcaataaaaaaa-atgcaacaacaacaacgttacaaa 7943246  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7943247 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 7943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 219 - 466
Target Start/End: Original strand, 42290376 - 42290623
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||  |||||||||||||||||||| ||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  42290376 acacctatgttttccttaattaaatttaaatctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgctataa 42290475  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||| || ||||||||||||||||||        ||||||||||||||||||||||||    
T  42290476 atgaagaaatatgagagatgaataatatctgtaatcggtagttaatagacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttacaaa 42290574  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42290575 tgatagaataattatatttgtaattattagtaattaatttcattgatgt 42290623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 51461162 - 51461411
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||  ||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  51461162 acacctaaatttttcttaattaaatttaattctttaatccttttaaagaattaaacataattatttttatgatttcattcatatgattttgttgctataa 51461261  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||| | |||| |||||||||||||||||| |||||   || ||||||||||||||||||        ||||||||||||||||||||||||    
T  51461262 atgaagaaatataagagataaataatatctgcaatcggtagttagatgacctaaaatgatgattcaataaaaaacaatgcaacaacaaaaacgttacaaa 51461361  T
Q  418 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51461362 tgatagaataattatatttgtaattattagtaattaatttcattgatgtc 51461411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 219 - 467
Target Start/End: Original strand, 21699981 - 21700230
Alignment:
Q  219 acacctaaattttccttaattaaa-tttaattctttaatctt-ttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata 316  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||| ||  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  21699981 acacctaaattttccttaattaaaatttaattctttaatcctcttaagaaattaaacataattatttttatgatttcattcatatgattttgttgccata 21700080  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    |||||| |||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||        |||||||||||||||||||| ||    
T  21700081 aatgaaaaaatatgatagatgaataatatgtgcaatcggtaattaatggacctaaaatgatgattcaataaaaaaa-atgcaacaacaaaaacgttagaa 21700179  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21700180 atgatataataattatatttgtaattattagtaattaatttcattgatgtc 21700230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 5329981 - 5329732
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc--ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacata 316  Q
    |||||||||||||  ||||||||||||||||||||||||  |||||| |||  ||||| |||||||||||||||||||||||||||||||| ||  ||||    
T  5329981 acacctaaattttttttaattaaatttaattctttaatcctttttaatgaattaaacataattatttttatgatttcattcatatgattttcttaccata 5329882  T
Q  317 aatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaa 416  Q
    ||| ||||||||||  ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||         |||||||||||||||||||||||    
T  5329881 aataaagaaatatgggagatgaataatatgtgcaatcggtagttaatgg-tctaaaatgatgattcaagaaaacaaaatgcaacaacaaaaacgttacaa 5329783  T
Q  417 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5329782 atgatagaataattatatttgtaattattagtaattaatttcattgatgtc 5329732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 219 - 456
Target Start/End: Complemental strand, 12628102 - 12627864
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatctt-ttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||| |||  ||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  12628102 acacctaaaatttccttaattaaatttaattctttaatcctgttaaagaattaaacataattatttttatgatttcatttatatgattttgttgccataa 12628003  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||        || |||||||||||||||||||||    
T  12628002 atgaagaaatatgagagatgaataatatctgtaatcggtagttaatggacctaaaataatgattcaataaaaaaaaatacaacaacaaaaacgttacaaa 12627903  T
Q  418 tgatagaataattatatttgtaattattagtaattaatt 456  Q
    | ||||||||||||||| |||||||||||||||||||||    
T  12627902 taatagaataattatatctgtaattattagtaattaatt 12627864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 219 - 381
Target Start/End: Complemental strand, 18609862 - 18609703
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaa 318  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||||||  | ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18609862 acacctaaatttttcttaattaaatttaattctttaatct---aaggaattacacataattatttttatgatttcattcatatgattttgttgccataaa 18609766  T
Q  319 tgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgatt 381  Q
    |||| ||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||    
T  18609765 tgaaaaaatatgatagatgaataatatccgcaatcggtaattaatggacctaatatgatgatt 18609703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 13760958 - 13760897
Alignment:
Q  316 aaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgat 377  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  13760958 aaatgaagaaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgat 13760897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 41909684 - 41909623
Alignment:
Q  324 aaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  41909684 aaatatgagagatgaataatatctgcaatcggtagttaatggacctaaaatgatgattcaat 41909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 13761011 - 13760963
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaagga 266  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13761011 acacctaaattttccttaattaaatttaattctttaatcattttaagga 13760963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 12627679 - 12627630
Alignment:
Q  394 atgcaacaacaaaaacgttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  12627679 atgcaacaacaaaaatattataaatgatagaataattatatttgtaatta 12627630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 12627382 - 12627426
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  12627382 tgatttcattcatataattttgttgccataaatgaagaaatatga 12627426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 41909111 - 41909155
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  41909111 tgatttcattcatataattttgttgtcataaatgaagaaatatga 41909155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 5329559 - 5329509
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  5329559 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 5329509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 5329266 - 5329310
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  5329266 tgatttcattcatataattttgttgccataaataaagaaatatga 5329310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 41909592 - 41909556
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||||||||||||| ||||||||||||||||||||    
T  41909592 atatttgtaattattaataattaatttcattgatgtc 41909556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 12627319 - 12627357
Alignment:
Q  219 acacctaaattttcc-ttaattaaatttaattctttaat 256  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12627319 acacctaaattttcccttaattaaatttaattctttaat 12627357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 51461565 - 51461615
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||| ||||||||||||||||||    
T  51461565 atgcaacaacaaaaaacattataaatgatagattaattatatttgtaatta 51461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 21268667 - 21268626
Alignment:
Q  290 tttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    |||||||||||| ||||||||| |||||||||| ||||||||    
T  21268667 tttcattcatataattttgttgccataaatgaaaaaatatga 21268626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 41909385 - 41909348
Alignment:
Q  404 aaaaacgttacaaatgatagaataattatatttgtaat 441  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  41909385 aaaaacattataaatgatagaataattatatttgtaat 41909348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 15695945 - 15695981
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  15695945 atatttgtatttatttgtaattaatttcattgatgtc 15695981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 4e-79; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 219 - 466
Target Start/End: Complemental strand, 11159398 - 11159146
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11159398 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 11159299  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggat-ctaaaatgatgattcaat---nnnnnnntatgcaacaacaaaaacgtta 413  Q
    |||||||||||||| ||||||||||||||| | ||||| |||||||   | ||||||||||||||||||           ||||||||||||||||||||    
T  11159298 atgaagaaatatgagagatgaataatatctactatcggtagttaataattcctaaaatgatgattcaataaaaaaaaaaaatgcaacaacaaaaacgtta 11159199  T
Q  414 caaatgatagaataattatatttgtaattattagtaattaatttcattgatgt 466  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11159198 caaatgatagaataattatatttgaaattattagtaattaatttcattgatgt 11159146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 219 - 437
Target Start/End: Original strand, 35096744 - 35096963
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  35096744 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 35096843  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaa 417  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||||         ||||||||| ||||||||||||||    
T  35096844 atgaagaaatatgagagaggaataatatctgcaatcggtagttaatggacctaaaatgatgattcaacaaaaaaaaatgcaacaaaaaaaacgttacaaa 35096943  T
Q  418 tgatagaataattatatttg 437  Q
    ||||||||||||||||||||    
T  35096944 tgatagaataattatatttg 35096963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 270 - 467
Target Start/End: Original strand, 26350388 - 26350580
Alignment:
Q  270 aaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  26350388 aaacataattatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaataatatct-caatcggtagttaatggatct 26350486  T
Q  370 aaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||        |||    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26350487 aaaatgatgattcaataaaaaaa-atg---taacaaaaacgtttcaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 26350580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 117862 - 117709
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  117862 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatatgattttgttgccataa 117763  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaa 371  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||||| ||||    
T  117762 atgaagaaatatgagagatgaataatatctataatcggtagttaatggacctaa 117709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 219 - 467
Target Start/End: Complemental strand, 17338731 - 17338498
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatcttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataaa 318  Q
    |||||||||||||||||||||||||||||||||| |||             ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  17338731 acacctaaattttccttaattaaatttaattcttgaatt------------aaacataattatttttatgatttcattcatatgattttgttgccataaa 17338644  T
Q  319 tgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaat 418  Q
    ||  ||||||||| |||||||||||||||||||| || |||||||||| ||| |||||| |||||||        |||   |||||||||| || |||||    
T  17338643 tgtggaaatatgagagatgaataatatctgcaataggtagttaatggacctataatgatcattcaataaaaaaaaatg---caacaaaaacctttcaaat 17338547  T
Q  419 gatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17338546 gatagaataattatatttgtaattattagtaattaatatcattgatgtc 17338498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 15546356 - 15546204
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  15546356 acacctaaattttccttaattaaatttaattctttaatccttttaaggaattaaacataattatttttatgatttcattcatat-attttgttgccataa 15546258  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaa 371  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||||||| ||||    
T  15546257 atgaagaaatatgagagatgaaaaatatctgcaatcggtcgttaatggacctaa 15546204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 277 - 467
Target Start/End: Complemental strand, 32396550 - 32396370
Alignment:
Q  277 attatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatga 376  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||     |||| |||||||||| |||||||||    
T  32396550 attatttttatgatttcattcatatgattttgttgccataaatgaagaaatatgagagatgaataatatc-----tcggtagttaatggacctaaaatga 32396456  T
Q  377 tgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    |||||| ||        |||   ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32396455 tgattcgataaaaaa--atg---caacaaaaacgtttcaaatgatagaataattatatttgtaattattagtaattaattttattgatgtc 32396370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 11157905 - 11157949
Alignment:
Q  287 tgatttcattcatatgattttgttgacataaatgaagaaatatga 331  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  11157905 tgatttcattcatataattttgttgccataaatgaagaaatatga 11157949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 11158991 - 11158941
Alignment:
Q  394 atgcaacaacaaaaa-cgttacaaatgatagaataattatatttgtaatta 443  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  11158991 atgcaacaacaaaaaacattataaatgatagaataattatatttgtaatta 11158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 17338346 - 17338296
Alignment:
Q  394 atgcaacaacaaaaacg-ttacaaatgatagaataattatatttgtaatta 443  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  17338346 atgcaacaacaaaaaatattataaatgatagaataattatatttgtaatta 17338296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 26350325 - 26350297
Alignment:
Q  277 attatttttatgatttcattcatatgatt 305  Q
    |||||||||||||||||||||||||||||    
T  26350325 attatttttatgatttcattcatatgatt 26350297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 270 - 467
Target Start/End: Original strand, 127650 - 127846
Alignment:
Q  270 aaacaaaattatttttatgatttcattcatatgattttgttgacataaatgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||| | ||||| || |||| ||| ||||||||||||||||||||||| |||||||||| ||    
T  127650 aaacataattatttttatgatttcattcatatgattttgttgccttaaattaataaatttgagagatgaataatatctgcaatcggtagttaatggacct 127749  T
Q  370 aaaatgatgattcaatnnnnnnntatgcaacaacaaaaacgttacaaatgatagaataattatatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||||        ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  127750 aaaatgatgattcaataaaaaaa-atgcaacaacaaaaatgttacaaatgatagaataattatatttgtaattattattaattaatttcattgatgtc 127846  T

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Target: scaffold0092 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 54671 - 54838
Alignment:
Q  219 acacctaaattttccttaattaaatttaattctttaatc-ttttaaggaaccaaacaaaattatttttatgatttcattcatatgattttgttgacataa 317  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  54671 acacctaaattttctttaattaaatttaattctttaatcattttaaggaattaaacataattatttttatgatttcattcatataattttgttgccataa 54770  T
Q  318 atgaagaaatatgatagatgaataatatctgcaatcggcagttaatggatctaaaatgatgattcaat 385  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||||||||    
T  54771 atgaagaaatatgagagatgaataatatatgcaatcggtagttaatagacctaaaatgatgattcaat 54838  T

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Target: scaffold1379 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 356 - 320
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||    
T  356 atatttgtaattatttgtaattaatttcattgatgtc 320  T

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Target: scaffold1379; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 391 - 363
Alignment:
Q  228 ttttccttaattaaatttaattctttaat 256  Q
    |||||||||||||||||||||||||||||    
T  391 ttttccttaattaaatttaattctttaat 363  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 467
Target Start/End: Complemental strand, 1561 - 1525
Alignment:
Q  431 atatttgtaattattagtaattaatttcattgatgtc 467  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1561 atatttgtatttatttgtaattaatttcattgatgtc 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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