View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6884_low_5 (Length: 308)

Name: NF6884_low_5
Description: NF6884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6884_low_5
NF6884_low_5
[»] chr6 (22 HSPs)
chr6 (23-227)||(35049478-35049681)
chr6 (224-305)||(11785356-11785439)
chr6 (224-305)||(19789063-19789146)
chr6 (224-305)||(32457239-32457322)
chr6 (224-267)||(21857594-21857637)
chr6 (224-303)||(29383558-29383639)
chr6 (224-305)||(15722490-15722573)
chr6 (224-305)||(28647422-28647505)
chr6 (224-305)||(30906650-30906733)
chr6 (224-267)||(3821379-3821422)
chr6 (226-305)||(21506339-21506420)
chr6 (225-267)||(29643444-29643486)
chr6 (224-261)||(2689097-2689134)
chr6 (224-265)||(16337099-16337140)
chr6 (224-261)||(20822901-20822938)
chr6 (224-261)||(32459550-32459587)
chr6 (224-305)||(9954549-9954632)
chr6 (219-267)||(25554241-25554289)
chr6 (224-268)||(27102116-27102160)
chr6 (224-268)||(27143938-27143982)
chr6 (224-305)||(32253781-32253864)
chr6 (226-295)||(34490350-34490421)
[»] chr1 (50 HSPs)
chr1 (224-305)||(46947982-46948063)
chr1 (224-305)||(40610230-40610313)
chr1 (224-305)||(43755665-43755748)
chr1 (224-302)||(49596236-49596316)
chr1 (224-305)||(8464500-8464583)
chr1 (224-305)||(32873342-32873425)
chr1 (224-305)||(45042262-45042345)
chr1 (224-305)||(52233208-52233291)
chr1 (224-267)||(30439251-30439294)
chr1 (224-267)||(39669807-39669850)
chr1 (224-267)||(50062001-50062044)
chr1 (224-267)||(51193158-51193201)
chr1 (224-261)||(17167850-17167887)
chr1 (219-305)||(28253011-28253099)
chr1 (224-288)||(33125328-33125393)
chr1 (223-267)||(11068425-11068469)
chr1 (224-305)||(44112455-44112538)
chr1 (224-305)||(44641890-44641973)
chr1 (224-264)||(48678983-48679023)
chr1 (224-271)||(2854983-2855030)
chr1 (226-261)||(16234327-16234362)
chr1 (224-267)||(31184282-31184325)
chr1 (224-267)||(49699779-49699822)
chr1 (224-261)||(10890079-10890116)
chr1 (224-261)||(11097917-11097954)
chr1 (224-261)||(11947796-11947833)
chr1 (224-261)||(13489663-13489700)
chr1 (224-261)||(15705095-15705132)
chr1 (224-273)||(24910155-24910204)
chr1 (227-260)||(27563618-27563651)
chr1 (224-273)||(29632435-29632484)
chr1 (231-268)||(37138556-37138593)
chr1 (224-273)||(43196110-43196159)
chr1 (224-273)||(46003469-46003518)
chr1 (224-261)||(47820534-47820571)
chr1 (224-273)||(48872380-48872429)
chr1 (224-261)||(52362483-52362520)
chr1 (224-305)||(15061846-15061929)
chr1 (224-305)||(18959005-18959088)
chr1 (224-256)||(19969588-19969620)
chr1 (224-305)||(25988971-25989054)
chr1 (224-305)||(30687053-30687136)
chr1 (224-301)||(31436821-31436900)
chr1 (224-256)||(34768101-34768133)
chr1 (223-267)||(36231733-36231777)
chr1 (224-305)||(38233274-38233357)
chr1 (224-256)||(40139127-40139159)
chr1 (224-256)||(43612107-43612139)
chr1 (224-260)||(48325801-48325837)
chr1 (224-256)||(50781596-50781628)
[»] chr4 (62 HSPs)
chr4 (216-305)||(24772664-24772755)
chr4 (224-305)||(12074138-12074221)
chr4 (226-305)||(35580129-35580210)
chr4 (224-305)||(10096729-10096812)
chr4 (224-305)||(23347776-23347859)
chr4 (224-305)||(34116527-34116610)
chr4 (224-305)||(36512843-36512926)
chr4 (224-305)||(46794488-46794571)
chr4 (224-267)||(35661624-35661667)
chr4 (224-273)||(169523-169572)
chr4 (224-261)||(2999113-2999150)
chr4 (224-273)||(25139976-25140025)
chr4 (224-261)||(41609712-41609749)
chr4 (224-261)||(45521612-45521649)
chr4 (224-305)||(9162067-9162150)
chr4 (224-305)||(16004313-16004396)
chr4 (224-260)||(26718381-26718417)
chr4 (224-260)||(26731009-26731045)
chr4 (218-266)||(39010165-39010213)
chr4 (224-305)||(40755922-40756005)
chr4 (224-305)||(42516651-42516734)
chr4 (224-305)||(44165910-44165993)
chr4 (224-305)||(49194885-49194967)
chr4 (224-305)||(55996423-55996506)
chr4 (224-267)||(10994179-10994222)
chr4 (224-267)||(11012142-11012185)
chr4 (224-304)||(29384185-29384267)
chr4 (224-267)||(31147232-31147275)
chr4 (224-304)||(35332707-35332789)
chr4 (224-267)||(40335790-40335833)
chr4 (224-267)||(40721991-40722034)
chr4 (224-267)||(44250254-44250297)
chr4 (221-256)||(45143699-45143734)
chr4 (221-256)||(45152468-45152503)
chr4 (224-267)||(45548811-45548854)
chr4 (224-304)||(46912787-46912869)
chr4 (224-267)||(49768896-49768939)
chr4 (224-267)||(52392252-52392295)
chr4 (224-267)||(54165188-54165231)
chr4 (227-261)||(7325200-7325234)
chr4 (224-266)||(39067978-39068020)
chr4 (224-262)||(43168746-43168784)
chr4 (224-261)||(3475870-3475907)
chr4 (219-268)||(3968881-3968930)
chr4 (224-261)||(4915706-4915743)
chr4 (224-261)||(6126854-6126891)
chr4 (224-302)||(11064079-11064159)
chr4 (224-261)||(13139149-13139186)
chr4 (224-261)||(21617184-21617221)
chr4 (224-261)||(24088597-24088634)
chr4 (224-273)||(35824127-35824176)
chr4 (224-261)||(39345013-39345050)
chr4 (224-261)||(45851761-45851798)
chr4 (224-273)||(48722070-48722119)
chr4 (224-261)||(53463103-53463140)
chr4 (247-305)||(55927008-55927068)
chr4 (224-305)||(3664747-3664830)
chr4 (224-268)||(4489824-4489868)
chr4 (224-305)||(17363231-17363314)
chr4 (224-256)||(17683360-17683392)
chr4 (224-301)||(36444386-36444465)
chr4 (224-289)||(51318704-51318771)
[»] scaffold0002 (1 HSPs)
scaffold0002 (224-305)||(6428-6511)
[»] chr8 (53 HSPs)
chr8 (224-305)||(27630898-27630981)
chr8 (224-261)||(9314412-9314449)
chr8 (224-305)||(8074711-8074794)
chr8 (219-267)||(20473775-20473823)
chr8 (221-261)||(20995091-20995131)
chr8 (224-305)||(32174955-32175038)
chr8 (224-305)||(34473950-34474033)
chr8 (224-304)||(26294190-26294272)
chr8 (224-304)||(26307447-26307529)
chr8 (224-267)||(43873718-43873761)
chr8 (224-261)||(31596949-31596986)
chr8 (224-305)||(3988906-3988989)
chr8 (224-305)||(20852920-20853003)
chr8 (224-305)||(21418579-21418662)
chr8 (224-305)||(41406843-41406926)
chr8 (224-267)||(1332495-1332538)
chr8 (224-255)||(3207450-3207481)
chr8 (224-267)||(6161949-6161992)
chr8 (224-304)||(9738681-9738763)
chr8 (224-267)||(10553110-10553153)
chr8 (224-267)||(11223886-11223929)
chr8 (224-304)||(22767133-22767215)
chr8 (224-267)||(31806300-31806343)
chr8 (224-267)||(34996387-34996430)
chr8 (224-262)||(28570439-28570477)
chr8 (224-262)||(28578032-28578070)
chr8 (224-262)||(41639820-41639858)
chr8 (224-262)||(43290897-43290935)
chr8 (224-289)||(2768148-2768213)
chr8 (224-273)||(3950111-3950160)
chr8 (224-261)||(4658296-4658333)
chr8 (224-261)||(5925056-5925093)
chr8 (224-273)||(8841031-8841080)
chr8 (224-261)||(9208067-9208104)
chr8 (224-261)||(9985711-9985748)
chr8 (227-260)||(11089723-11089756)
chr8 (224-261)||(12707150-12707187)
chr8 (224-261)||(12783767-12783804)
chr8 (224-261)||(40380282-40380319)
chr8 (224-305)||(7596878-7596961)
chr8 (224-305)||(7678733-7678816)
chr8 (219-267)||(10344320-10344368)
chr8 (224-305)||(11879477-11879560)
chr8 (224-305)||(11896893-11896976)
chr8 (224-305)||(12959939-12960022)
chr8 (224-268)||(21273736-21273780)
chr8 (224-305)||(28927682-28927765)
chr8 (224-305)||(41304969-41305052)
chr8 (224-305)||(41344656-41344739)
chr8 (224-305)||(42047336-42047419)
chr8 (224-260)||(42689842-42689878)
chr8 (226-262)||(43420924-43420960)
chr8 (224-305)||(45101397-45101480)
[»] chr3 (45 HSPs)
chr3 (224-305)||(49130855-49130938)
chr3 (224-305)||(46315942-46316025)
chr3 (224-305)||(49196697-49196780)
chr3 (224-273)||(19418178-19418227)
chr3 (224-305)||(108432-108515)
chr3 (224-305)||(1402651-1402734)
chr3 (224-304)||(5398919-5398999)
chr3 (224-305)||(24537220-24537303)
chr3 (224-305)||(47849673-47849756)
chr3 (224-302)||(39604236-39604316)
chr3 (224-260)||(1337861-1337897)
chr3 (224-305)||(28300287-28300370)
chr3 (224-305)||(32457742-32457825)
chr3 (228-305)||(41309005-41309084)
chr3 (224-305)||(43900744-43900827)
chr3 (224-305)||(51032611-51032694)
chr3 (224-267)||(35376578-35376621)
chr3 (224-267)||(37134633-37134676)
chr3 (224-267)||(43333697-43333740)
chr3 (224-267)||(53932418-53932461)
chr3 (224-267)||(55466959-55467002)
chr3 (223-261)||(8839870-8839908)
chr3 (224-261)||(2482707-2482744)
chr3 (227-260)||(8254173-8254206)
chr3 (224-261)||(20549418-20549455)
chr3 (224-261)||(24095439-24095476)
chr3 (224-261)||(29525234-29525271)
chr3 (224-261)||(37585431-37585468)
chr3 (227-260)||(40478179-40478212)
chr3 (223-260)||(43883313-43883350)
chr3 (224-261)||(50652389-50652426)
chr3 (224-261)||(52714734-52714771)
chr3 (224-261)||(55400000-55400037)
chr3 (224-305)||(462388-462471)
chr3 (224-256)||(14992225-14992257)
chr3 (224-260)||(23869001-23869037)
chr3 (226-262)||(24645371-24645407)
chr3 (224-293)||(26279885-26279956)
chr3 (226-262)||(29373924-29373960)
chr3 (219-267)||(31206878-31206926)
chr3 (224-305)||(36869824-36869907)
chr3 (224-305)||(44334788-44334871)
chr3 (217-249)||(48352990-48353022)
chr3 (224-260)||(52564668-52564704)
chr3 (224-260)||(53871055-53871091)
[»] chr2 (47 HSPs)
chr2 (224-300)||(2013277-2013355)
chr2 (224-305)||(1889148-1889231)
chr2 (224-260)||(1095859-1095895)
chr2 (224-268)||(10749705-10749749)
chr2 (224-305)||(23344976-23345059)
chr2 (224-267)||(9202543-9202586)
chr2 (219-295)||(32688541-32688619)
chr2 (226-305)||(43791791-43791870)
chr2 (224-267)||(43994040-43994083)
chr2 (224-273)||(6365187-6365236)
chr2 (224-261)||(15269862-15269899)
chr2 (224-305)||(4738559-4738642)
chr2 (224-305)||(14713987-14714070)
chr2 (224-305)||(26321684-26321767)
chr2 (224-305)||(33296058-33296141)
chr2 (224-267)||(7498018-7498061)
chr2 (224-267)||(11442673-11442716)
chr2 (226-273)||(16447267-16447314)
chr2 (224-267)||(29711980-29712023)
chr2 (224-267)||(34442114-34442157)
chr2 (224-267)||(36587495-36587538)
chr2 (223-261)||(7502461-7502499)
chr2 (224-303)||(34139027-34139108)
chr2 (224-261)||(3299138-3299175)
chr2 (224-261)||(4061992-4062029)
chr2 (224-261)||(6999101-6999138)
chr2 (224-261)||(9634469-9634506)
chr2 (224-261)||(13347848-13347885)
chr2 (224-261)||(13765401-13765438)
chr2 (224-253)||(18508079-18508108)
chr2 (224-261)||(18723595-18723632)
chr2 (224-261)||(26206848-26206885)
chr2 (227-260)||(30413624-30413657)
chr2 (227-260)||(30487340-30487373)
chr2 (226-267)||(35965578-35965619)
chr2 (224-261)||(44712022-44712059)
chr2 (224-260)||(694281-694317)
chr2 (224-305)||(5455440-5455523)
chr2 (224-260)||(6511579-6511615)
chr2 (224-305)||(11980652-11980735)
chr2 (224-305)||(12600049-12600132)
chr2 (224-256)||(15141474-15141506)
chr2 (224-305)||(22390153-22390236)
chr2 (224-268)||(26321891-26321935)
chr2 (224-305)||(28165130-28165213)
chr2 (224-260)||(35171260-35171296)
chr2 (232-301)||(41056813-41056884)
[»] chr7 (39 HSPs)
chr7 (224-304)||(7990080-7990162)
chr7 (226-305)||(30862641-30862720)
chr7 (224-305)||(30447359-30447444)
chr7 (224-305)||(2790178-2790261)
chr7 (224-305)||(16567317-16567400)
chr7 (224-305)||(16598262-16598345)
chr7 (224-305)||(19426581-19426664)
chr7 (224-305)||(40842406-40842489)
chr7 (224-305)||(44894460-44894543)
chr7 (224-267)||(42663085-42663128)
chr7 (224-289)||(3247070-3247137)
chr7 (224-305)||(26153647-26153729)
chr7 (224-256)||(28862108-28862140)
chr7 (224-267)||(33212043-33212086)
chr7 (224-267)||(38096466-38096509)
chr7 (224-267)||(41966333-41966376)
chr7 (224-273)||(3343350-3343400)
chr7 (226-268)||(31436422-31436464)
chr7 (226-305)||(34304665-34304746)
chr7 (219-260)||(6353721-6353762)
chr7 (224-261)||(22692085-22692122)
chr7 (224-273)||(23329903-23329952)
chr7 (227-256)||(26041460-26041489)
chr7 (224-261)||(30818030-30818067)
chr7 (224-273)||(31364905-31364954)
chr7 (227-256)||(35004135-35004164)
chr7 (224-261)||(35823008-35823045)
chr7 (224-261)||(37899246-37899283)
chr7 (224-261)||(41893916-41893953)
chr7 (224-273)||(42194906-42194954)
chr7 (227-256)||(44511289-44511318)
chr7 (224-261)||(48383351-48383388)
chr7 (224-264)||(2005733-2005773)
chr7 (224-305)||(7807056-7807139)
chr7 (224-305)||(34349014-34349097)
chr7 (224-256)||(34992362-34992394)
chr7 (225-273)||(41890529-41890577)
chr7 (224-256)||(43171211-43171243)
chr7 (224-305)||(46651673-46651756)
[»] scaffold0204 (1 HSPs)
scaffold0204 (224-305)||(27340-27423)
[»] scaffold0154 (2 HSPs)
scaffold0154 (224-305)||(4316-4399)
scaffold0154 (224-273)||(9869-9918)
[»] chr5 (38 HSPs)
chr5 (224-273)||(30420627-30420676)
chr5 (224-305)||(12661934-12662017)
chr5 (224-305)||(38500944-38501027)
chr5 (224-273)||(34400619-34400668)
chr5 (224-305)||(12349782-12349865)
chr5 (224-305)||(26660398-26660481)
chr5 (224-305)||(26931990-26932073)
chr5 (224-305)||(27340870-27340953)
chr5 (224-305)||(34381013-34381096)
chr5 (224-305)||(34767402-34767485)
chr5 (224-255)||(4820156-4820187)
chr5 (224-267)||(8897383-8897426)
chr5 (224-267)||(20125390-20125433)
chr5 (224-267)||(20591501-20591544)
chr5 (225-305)||(24431605-24431687)
chr5 (224-267)||(31708371-31708414)
chr5 (224-267)||(36416089-36416132)
chr5 (224-303)||(2456027-2456108)
chr5 (226-305)||(3141498-3141579)
chr5 (224-262)||(4434483-4434521)
chr5 (218-260)||(30334789-30334831)
chr5 (223-302)||(31024995-31025076)
chr5 (224-261)||(4088444-4088481)
chr5 (224-261)||(6517713-6517750)
chr5 (227-256)||(9599660-9599689)
chr5 (224-261)||(10649436-10649473)
chr5 (224-261)||(19840019-19840056)
chr5 (224-261)||(21012569-21012606)
chr5 (224-261)||(25871479-25871516)
chr5 (224-261)||(28501593-28501630)
chr5 (224-261)||(34124622-34124659)
chr5 (224-261)||(38704230-38704267)
chr5 (224-305)||(6529020-6529103)
chr5 (224-305)||(33743320-33743403)
chr5 (224-305)||(39191821-39191904)
chr5 (224-305)||(39595273-39595356)
chr5 (224-305)||(40223772-40223855)
chr5 (224-264)||(42699058-42699098)
[»] scaffold0020 (1 HSPs)
scaffold0020 (224-305)||(155907-155990)
[»] scaffold0504 (1 HSPs)
scaffold0504 (224-304)||(10723-10805)
[»] scaffold0131 (1 HSPs)
scaffold0131 (221-273)||(15555-15607)
[»] scaffold0014 (1 HSPs)
scaffold0014 (224-305)||(199267-199350)
[»] scaffold0148 (1 HSPs)
scaffold0148 (224-267)||(9454-9497)
[»] scaffold0057 (2 HSPs)
scaffold0057 (224-304)||(38880-38962)
scaffold0057 (224-264)||(21655-21695)
[»] scaffold0024 (1 HSPs)
scaffold0024 (224-267)||(60470-60513)
[»] scaffold0072 (1 HSPs)
scaffold0072 (224-262)||(14572-14610)
[»] scaffold0130 (1 HSPs)
scaffold0130 (224-261)||(25704-25741)
[»] scaffold0016 (1 HSPs)
scaffold0016 (224-289)||(204450-204515)
[»] scaffold0060 (1 HSPs)
scaffold0060 (224-305)||(6818-6901)


Alignment Details
Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 35049681 - 35049478
Alignment:
Q  23 tatttgtatttttgggcttcgttcacttgataatacatatccattaattaaaaaataaaacctgt---gaaggctctaacgtcatccctaaccctcatac 119  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||    ||||||||||||||   |||||||||| |||||||||||||||||||||    
T  35049681 tatttgtacttttgggtttggttcacttgataatacatatccattaa----aaaataaaacctgtagtgaaggctctagcgtcatccctaaccctcatac 35049586  T
Q  120 ggtggacctttttatgaggattatttaatgtacactgtctatgtacagggttgtgcaatacctccctaccgagtctcgtcttaccaacatcgtcaactat 219  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35049585 ggtggacctttttatgaggattatttaatgtacaccgtctatgtacggggttgtgcaatacctccctaccgagtctcgtcttaccaacatcgtcaactat 35049486  T
Q  220 atttagaa 227  Q
    || |||||    
T  35049485 atctagaa 35049478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 11785356 - 11785439
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||||| |  || |||||||||| |||| |||||||||    
T  11785356 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacattatattcttattctctctc 11785439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 19789146 - 19789063
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  19789146 agaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattatagtcttattctctctc 19789063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 32457322 - 32457239
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctat--gttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||| |||| |    |||||||||||||||||| |||||||||    
T  32457322 agaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctcacatactcacattatactcttattctctctc 32457239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 21857637 - 21857594
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  21857637 agaaatgatatttgtacaaccattttatgacaatttgttgacaa 21857594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 29383558 - 29383639
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctc 303  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||||||||| |||||||    
T  29383558 agaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactcttattctctc 29383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 15722573 - 15722490
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  |||||| |||||| |||||||||| ||||| | |  ||||||||||||| | || |||||||||    
T  15722573 agaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacattatagtattattctctctc 15722490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 28647505 - 28647422
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| | | ||||||| |||||||||||||||| |||| | |  |||| |||||||| |||| |||||||||    
T  28647505 agaaatgatatttgtataactattttattacaattttttgacaattttctctctcatacttacattatattcttattctctctc 28647422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 30906733 - 30906650
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||  |  ||| |  ||||||| |||||||||| |||||||||    
T  30906733 agaaatgatatttctacattcattttatgacaactttttgacaactttatctctcatactcacgttatactcttattctctctc 30906650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 3821379 - 3821422
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||    
T  3821379 agaaatgatatttgtacaaccactttattacaattttttgacaa 3821422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 21506339 - 21506420
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| ||||||| |||||| ||||||||||  |||| | |  ||||||||||||  |||| |||||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctcatactcacattatcttcttattctctctc 21506420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 29643486 - 29643444
Alignment:
Q  225 gaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||| |||||| ||||||| |||||||||||||||||    
T  29643486 gaaatgatatatgtacaaccattttctgacaattttttgacaa 29643444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 2689134 - 2689097
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  2689134 agaaatgatatttgaacatccatttaatgacaattttt 2689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 16337140 - 16337099
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgac 265  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  16337140 agaaatgatatttgtacaatcactttatgacaattttttgac 16337099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 20822938 - 20822901
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  20822938 agaaatgatatttgaacatccattttatgacaactttt 20822901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 32459587 - 32459550
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  32459587 agaaatgatatttgaacatccattttatgacaactttt 32459550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 9954549 - 9954632
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||| ||||||| ||||| |||||||||    
T  9954549 agaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctctcatacttacattatcctcttattctctctc 9954632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 25554241 - 25554289
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||| |||||||||||||||||| ||||||| || ||||||||| ||||    
T  25554241 tattgagaaatgatatttgtacaaccattttgtggcaatttttttacaa 25554289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 27102116 - 27102160
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||||| ||||||| | | ||||||||||||||    
T  27102116 agaaatgatatttgtacaaccattttctaataattttttgacaat 27102160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 27143938 - 27143982
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||||| ||||||| | | ||||||||||||||    
T  27143938 agaaatgatatttgtacaaccattttctaataattttttgacaat 27143982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 32253781 - 32253864
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| ||| |||||| ||| ||| |||| | |  |||||||||||||||||| ||| |||||    
T  32253781 agaaatgatatttgtacaaccactttttgataattttgtgataattttctctctcatactcacattatactcttattccctctc 32253864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 34490350 - 34490421
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactctt 295  Q
    |||||||||||||||| ||||||| | ||||||||| |||||| |||| | |  ||||||||||||| ||||    
T  34490350 aaatgatatttgtacaaccattttttaacaatttttagacaattttctctctcatactcacattatattctt 34490421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 46947982 - 46948063
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  46947982 agaaatgatatttgtacatccattttatgacaactttttgacaaccttctctcttactcacattatactcttattctctctc 46948063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 40610230 - 40610313
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||| | |  |||||||||||||||||| |||||||||    
T  40610230 agaaatgatatttatacattcattttatgacaattttttgacaaccttctctctcatactcacattatactcttattctctctc 40610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 43755748 - 43755665
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||| | |  |||||| ||||||||||| |||||||||    
T  43755748 agaaatgatatttgtacaaccattttatgataattttttgacaattttctctttcatactcatattatactcttattctctctc 43755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 49596236 - 49596316
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctct 302  Q
    |||||||||||||||||| ||||||||| |||||||||||||||  |||| | |  ||||||||||||| |||| ||||||    
T  49596236 agaaatgatatttgtacaaccattttattacaattttttgacaactttctctctcatactcacattatattcttattctct 49596316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 8464583 - 8464500
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  8464583 agaaatgatatttgtacaaccactttattacaactttttgacaattttctctctcatactcacattatattcttattctctctc 8464500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 32873342 - 32873425
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||||||||||| || ||||  |||||||| ||| |  ||||||||||||  |||| |||||||||    
T  32873342 agaaatgatatttgtacatccattttatgataacttttgtacaatcttttatctcatactcacattatcttcttattctctctc 32873425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 45042262 - 45042345
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| | ||||| | |||||||||||||||| || | | |  |||||||||||||||||| |||||||||    
T  45042262 agaaatgatatttgtacaactattttctaacaattttttgacaattttttctctcatactcacattatactcttattctctctc 45042345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 52233291 - 52233208
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatct--tctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| | |||||||||||||||| |  |||||  |||| ||||||| ||||| |||||||||    
T  52233291 agaaatgatatttgtacaaccattttctcacaattttttgacaattttctctatcatacttacattatcctcttattctctctc 52233208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 30439251 - 30439294
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  30439251 agaaatgatatttgtacaaccaatttatgacaattttttgacaa 30439294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 39669807 - 39669850
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  39669807 agaaatgatatttgtacaaccattttgtgacaattttttgacaa 39669850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 50062044 - 50062001
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  50062044 agaaatgatatttgtacatccactttatgataattttttgacaa 50062001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 51193201 - 51193158
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  51193201 agaaatgatatttgtacatccattttataacaatttttggacaa 51193158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 17167850 - 17167887
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17167850 agaaatgatatttgtacatccattttatgacaactttt 17167887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 28253011 - 28253099
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||| |||||||||||||||||| ||| ||| | |||| ||||||||||| |||| | |  |||||||||||| ||||| |||||||||    
T  28253011 tattgagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattatcctcttattctctctc 28253099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 33125393 - 33125328
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt-tgacaatcttctatgttactcacatta 288  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||| |||| |  |||||||||||    
T  33125393 agaaatgatatttgaacatccattttatgataatttttgtgacaattttctttcatactcacatta 33125328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 11068425 - 11068469
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||    
T  11068425 tagaaatgatatttgtacaaccactttattacaattttttgacaa 11068469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 44112455 - 44112538
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||  |||| | |  ||||||||||||| | || |||||||||    
T  44112455 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatatttttattctctctc 44112538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 44641973 - 44641890
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||  |||| | |  ||||||||||||| | || |||||||||    
T  44641973 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatatttttattctctctc 44641890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 48679023 - 48678983
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttga 264  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  48679023 agaaatgatatttgtacaatcattttatgacaattttttga 48678983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 2855030 - 2854983
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatctt 271  Q
    ||||||||||||||||||| ||||||||||||| ||||  ||||||||    
T  2855030 agaaatgatatttgtacattcattttatgacaacttttgtacaatctt 2854983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 16234362 - 16234327
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16234362 aaatgatatttgtacatccattttatgacaactttt 16234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 31184282 - 31184325
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||    
T  31184282 agaaatgatatttgtacaaccattttatgacaactttttaacaa 31184325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 49699822 - 49699779
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||    
T  49699822 agaaatgatatttgtacaaccattttatgataattttttaacaa 49699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 10890116 - 10890079
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  10890116 agaaatgatatttgaacatccattttatgacaactttt 10890079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 11097954 - 11097917
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  11097954 agaaatgatatttgtacatccattttgtgacaactttt 11097917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 11947796 - 11947833
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  11947796 agaaatgatatttgtacaaccattttatgacaactttt 11947833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 13489663 - 13489700
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  13489663 agaaatgatatttgaacatccattttatgacaactttt 13489700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 15705132 - 15705095
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  15705132 agaaatgatatttgaacatccattttatgacaactttt 15705095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 24910204 - 24910155
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||| |||||||||| ||| | |||||||||||||||| ||||    
T  24910204 agaaatgatatatgtacatccactttttaacaattttttgacaattttct 24910155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 27563651 - 27563618
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||| |||||||||||    
T  27563651 aatgatatttgtacatccatttaatgacaatttt 27563618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 29632435 - 29632484
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||||  ||||| | |||||||||||||||| ||||    
T  29632435 agaaatgatatttgtacatttattttgtaacaattttttgacaattttct 29632484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 37138593 - 37138556
Alignment:
Q  231 atatttgtacatccattttatgacaattttttgacaat 268  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  37138593 atatttgtacaaccactttatgacaattttttgacaat 37138556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 43196159 - 43196110
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||||||||||   |||| ||||||||||| ||||    
T  43196159 agaaatgatatttgtacatccattttgctacaactttttgacaattttct 43196110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 46003469 - 46003518
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||| ||||    
T  46003469 agaaatgatatatgtatatccattttgtgacaattttttaacaattttct 46003518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 47820571 - 47820534
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  47820571 agaaatgatatttgaacatccattttatgacaactttt 47820534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 48872380 - 48872429
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||| |||||||||| |||| ||||| |||||    
T  48872380 agaaatgatatttgtacaaccactttatgacaacttttagacaaccttct 48872429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 52362483 - 52362520
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  52362483 agaaatgatatttgaacatccattttatgacaactttt 52362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 15061846 - 15061929
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| | ||| ||| |||||| ||||||||||| |||| | |  ||||||||||||  |||| |||||||||    
T  15061846 agaaatgatatttgtataaccactttgtgacaactttttgacaattttctctctcatactcacattatcatcttattctctctc 15061929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 18959005 - 18959088
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||| |||| ||||||| | |||| ||||||||||| |||| | |  ||||||||||||  |||| |||||||||    
T  18959005 agaaatgatatttatacaaccattttgttacaactttttgacaattttctctctcatactcacattattatcttattctctctc 18959088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 19969620 - 19969588
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||| ||||||||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaa 19969588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 25989054 - 25988971
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| | |||| |||| |||||| |||| | |  ||||||||||||| ||||  ||||||||    
T  25989054 agaaatgatatttgtacaaccattttttaacaacttttagacaattttctctctcatactcacattatattcttactctctctc 25988971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 30687053 - 30687136
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||  |||||| |||| |||||  | ||||||  ||||||||||||| ||||  ||||||||    
T  30687053 agaaatgatatttgtacaaccatttagtgacaacttttagacaactttttctatcatactcacattatattcttactctctctc 30687136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 31436821 - 31436900
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctc 301  Q
    |||||||||||||||||| ||| ||| | |||| ||||||||||| |||| | |  |||||||||||| ||||| |||||    
T  31436821 agaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattatcctcttattctc 31436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 34768101 - 34768133
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||||||||||||| ||||    
T  34768101 agaaatgatatttgtacatccattttataacaa 34768133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 36231777 - 36231733
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||||||||| ||||||| ||||||| ||| |||||    
T  36231777 tagaaatgatatttgtacaaccattttgtgacaatatttagacaa 36231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 38233274 - 38233357
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||| | |||||||||||||| |||||||||||| ||||| || | | |  ||||||||||||| ||||  ||||||||    
T  38233274 agaaatgatgtatgtacatccattttttgacaattttttaacaattttttctctcatactcacattatattcttaatctctctc 38233357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 40139127 - 40139159
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||| ||||||||||||||    
T  40139127 agaaatgatatttgtacaaccattttatgacaa 40139159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 43612139 - 43612107
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||| ||||||||||||||    
T  43612139 agaaatgatatttgtacaaccattttatgacaa 43612107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 48325837 - 48325801
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  48325837 agaaatgatatttgtacaaccattttgtgacaatttt 48325801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 50781628 - 50781596
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||| ||||||||||||||||||    
T  50781628 agaaatgatatttgaacatccattttatgacaa 50781596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 24772664 - 24772755
Alignment:
Q  216 ctatatttagaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| | |  |||||||||||||||||| |||||||||    
T  24772664 ctatattgagaaatgatatttgtacatccattttatgacaactttttgacaaccttctctctcatactcacattatactcttattctctctc 24772755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 12074221 - 12074138
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  ||| | |  || ||||||||||||||| |||||||||    
T  12074221 agaaatgatatttgtacaaccattttatgacaattttttgacaattctctttctcatattcacattatactcttattctctctc 12074138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 35580129 - 35580210
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||| | |  ||| ||||||||| |||| |||||||||    
T  35580129 aaatgatatttgtacagccattttctgacaattttttgacaattttctttctcatacccacattatattcttattctctctc 35580210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 10096812 - 10096729
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  10096812 agaaatgatatttgtacaaccactttattacaactttttgacaattttctttctcatactcacattatattcttattctctctc 10096729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 23347776 - 23347859
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||| ||| |||||| ||||| ||||| |||| | |  |||||||||||| ||||| |||||||||    
T  23347776 agaaatgatatttgtacatccactttgtgacaactttttaacaattttctctctcatactcacattatcctcttattctctctc 23347859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 34116610 - 34116527
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||| |||| | |  |||||||||||||||||| |||| ||||    
T  34116610 agaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatactcacattatactcttattctttctc 34116527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 36512843 - 36512926
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||| ||||||||||||  ||||||| |||| |||||||||| ||||| | |  |||||||||||||||||| |||||||||    
T  36512843 agaaattatatttgtacatttattttataacaactttttgacaaccttctctctcatactcacattatactcttattctctctc 36512926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 46794571 - 46794488
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||||||||| |||||||||    
T  46794571 agaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactcttattctctctc 46794488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 35661667 - 35661624
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  35661667 agaaatgatatttgtacaaccattttatgacaatttttagacaa 35661624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 169572 - 169523
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||| ||||    
T  169572 agaaatgatatttgtacaaccattttgtgacaactttttgacaattttct 169523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 2999113 - 2999150
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2999113 agaaatgatatttgaacatccattttatgacaattttt 2999150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 25140025 - 25139976
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| ||||    
T  25140025 agaaatgatatttgtacaaccactttattacaattttttgacaattttct 25139976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 41609749 - 41609712
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41609749 agaaatgatatttgtacatccattttatgacaactttt 41609712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 45521649 - 45521612
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  45521649 agaaatgatatttgtacatccattttatgacaactttt 45521612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 9162067 - 9162150
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  |||||| |||||| ||||||||||| |||| | |  ||||| |||||| ||||| |||||||||    
T  9162067 agaaatgatatttgtacaatcattttgtgacaactttttgacaattttctctctaatactcgcattattctcttattctctctc 9162150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 16004396 - 16004313
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||| || ||| |||||||||| ||||||| || ||||| | |  || ||||||||||||||| |||||||||    
T  16004396 agaaatgatatttgttcaaccactttatgacaactttttgataaccttctctctaatattcacattatactcttattctctctc 16004313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 26718381 - 26718417
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26718381 agaaatgatatttgaacatccattttatgacaatttt 26718417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 26731009 - 26731045
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26731009 agaaatgatatttgaacatccattttatgacaatttt 26731045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 39010213 - 39010165
Alignment:
Q  218 atatttagaaatgatatttgtacatccattttatgacaattttttgaca 266  Q
    ||||| |||||||||||||||||| ||||||| |||||| |||||||||    
T  39010213 atattgagaaatgatatttgtacaaccattttgtgacaactttttgaca 39010165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 40755922 - 40756005
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| | |||||||||||| ||| |||| | |  ||||||||||||  |||| |||||||||    
T  40755922 agaaatgatatttgtacaaccattttctaacaattttttgataattttctctctcatactcacattatcttcttattctctctc 40756005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 42516651 - 42516734
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||   ||||| |  ||||||||||||| |||| |||||||||    
T  42516651 agaaatgatatttgtacaaccactttattacaactttttgacaaatatctatctaatactcacattatattcttattctctctc 42516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 44165910 - 44165993
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| |||  ||||||||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  44165910 agaaatgatatttgtacaaccactttgcgacaattttttgacaactttctctctcatactcacattattctcttattctctctc 44165993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 49194885 - 49194967
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||  |||| | |  ||||||||||| |||||| |||||||||    
T  49194885 agaaatgatatttgtacaacca-tttatgacaatcttttgacaactttctctcttatactcacattagactcttattctctctc 49194967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 55996423 - 55996506
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  |||||| | |||||||||||||||| |||| | |  ||||||||||||  |||| |||||||||    
T  55996423 agaaatgatatttgtacaatcattttctaacaattttttgacaattttctctctcatactcacattatcttcttattctctctc 55996506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 10994222 - 10994179
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||    
T  10994222 agaaatgatatttgtacaaccattttgtgacaatcttttgacaa 10994179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 11012142 - 11012185
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||    
T  11012142 agaaatgatatttgtacaaccattttatgacaactttttaacaa 11012185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 29384267 - 29384185
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    ||||||||||||||||||  || |||||||||||||||| ||||  |||| | |  ||||||||||||||| || ||||||||    
T  29384267 agaaatgatatttgtacaatcactttatgacaattttttaacaactttctctcttatactcacattatacttttattctctct 29384185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 31147232 - 31147275
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||    
T  31147232 agaaatgatatttgtacaaccactttattacaattttttgacaa 31147275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 35332707 - 35332789
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||| ||||||| |||||||||| ||  |||| | |  ||||||||||||| |||| ||||||||    
T  35332707 agaaatgatatttgtacaaccactttatgataattttttgataactttctctctcatactcacattatattcttattctctct 35332789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 40335790 - 40335833
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||||||||  |||||||| |||||||||||||||    
T  40335790 agaaatgatatttgtacaatcattttattacaattttttgacaa 40335833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 40722034 - 40721991
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||||||||| | ||||||| |||||    
T  40722034 agaaatgatatttgtacatccattttataataatttttggacaa 40721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 44250297 - 44250254
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||| ||||||||| | |||||||||||||||    
T  44250297 agaaatgatatttgtatatccattttgtaacaattttttgacaa 44250254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 45143734 - 45143699
Alignment:
Q  221 tttagaaatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||| ||||||||||||||||||    
T  45143734 tttagaaatgatatttgaacatccattttatgacaa 45143699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 45152503 - 45152468
Alignment:
Q  221 tttagaaatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||| ||||||||||||||||||    
T  45152503 tttagaaatgatatttgaacatccattttatgacaa 45152468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 45548854 - 45548811
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||    
T  45548854 agaaatgatatttgtacaaccattttgtgataattttttgacaa 45548811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 46912869 - 46912787
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||| ||||| |||||||||| ||||  |||| | |  ||||||||||||| |||| ||||||||    
T  46912869 agaaatgatatttgtacaaccactttattacaattttttaacaactttctctctcatactcacattatattcttattctctct 46912787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 49768939 - 49768896
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||||||||||||||||   |||||||||||||||    
T  49768939 agaaatgatatttgtacatccattttgcaacaattttttgacaa 49768896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 52392295 - 52392252
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||    
T  52392295 agaaatgatatttgtacatccactttgtgacaactttttgacaa 52392252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 54165231 - 54165188
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||  |||||||||||||||    
T  54165231 agaaatgatatttgtacaaccattttactacaattttttgacaa 54165188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 7325200 - 7325234
Alignment:
Q  227 aatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||| |||||||||||||||||||||    
T  7325200 aatgatatttgtaaatccattttatgacaattttt 7325234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 39068020 - 39067978
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgaca 266  Q
    ||||||||||| |||||||||||||| |||||| |||||||||    
T  39068020 agaaatgatatatgtacatccattttttgacaactttttgaca 39067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 43168784 - 43168746
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  43168784 agaaatgatatttgtacaaccattttgtgacaatttttt 43168746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 3475870 - 3475907
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  3475870 agaaatgatatttgtacaaccattttatgacaactttt 3475907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 3968881 - 3968930
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||| |||||||||||||||||| ||||||| | |||| |||||||||||    
T  3968881 tattgagaaatgatatttgtacaaccattttctaacaactttttgacaat 3968930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 4915743 - 4915706
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  4915743 agaaatgatatttgaacatccattttgtgacaattttt 4915706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 6126854 - 6126891
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  6126854 agaaatcatatttgtacatctattttatgacaattttt 6126891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 11064159 - 11064079
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctct 302  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| ||||||    
T  11064159 agaaatgatatttgtacaaccactttgtgacaactttttgacaacattctctctcatactcacattatgctcttattctct 11064079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 13139149 - 13139186
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  13139149 agaaatgatatttgaacatccattttatgataattttt 13139186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 21617184 - 21617221
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  21617184 agaaatgatatttgaacatccattttgtgacaattttt 21617221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 24088634 - 24088597
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  24088634 agaaatgatatttgtacaaccattttatgacaactttt 24088597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 35824176 - 35824127
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||||||| | |||| |||| |||||||||||    
T  35824176 agaaatgatatttgtacaaccattttttaacaacttttggacaatcttct 35824127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 39345050 - 39345013
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  39345050 agaaatgatatttgaacatccattttgtgacaattttt 39345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 45851761 - 45851798
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  45851761 agaaatgatatttgaacatcaattttatgacaattttt 45851798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 48722070 - 48722119
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||||||||||   |||| ||||||||||| ||||    
T  48722070 agaaatgatatttgtacatccattttgcaacaactttttgacaattttct 48722119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 53463140 - 53463103
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  53463140 agaaatgatatttgtacaaccattttataacaattttt 53463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 55927008 - 55927068
Alignment:
Q  247 tttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||| |||||||||| ||||| | |  |||||||||||||||||| |||||||||    
T  55927008 tttatgacaactttttgacaaccttctctctcatactcacattatactcttattctctctc 55927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 3664830 - 3664747
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| || ||||| | ||| ||||||  ||||||||||||||| | |  ||| |||||||||||||| |||||||||    
T  3664830 agaaatgatatatgcacatctactttgtgacaacattttgacaatcttctctctcatacccacattatactcttattctctctc 3664747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 4489868 - 4489824
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||| | ||||||| | ||||||||||||||||    
T  4489868 agaaatgatatttgtataaccattttctaacaattttttgacaat 4489824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 17363231 - 17363314
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  || ||||| |||| ||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  17363231 agaaatgatatttgtacaatcactttattacaactttttgacaactttctctctcatactcacattatattcttattctctctc 17363314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 17683360 - 17683392
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||| ||||||||||||||||||    
T  17683360 agaaatgatatttgaacatccattttatgacaa 17683392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 36444465 - 36444386
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctc 301  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||  |||| | |  ||||||||||||||| || |||||    
T  36444465 agaaatgatatttgtacaaccattttatgataactttttaacaactttctctctcatactcacattatacttttattctc 36444386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 51318704 - 51318771
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattat 289  Q
    |||||||||||||||||| ||| ||| ||| || ||||||||||  ||||||||  ||||||||||||    
T  51318704 agaaatgatatttgtacaaccactttgtgataactttttgacaatttcttctatcatactcacattat 51318771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 6428 - 6511
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||| | |  |||||||||||||||||| |||||||||    
T  6428 agaaatgatatttgtacatccattttatgacaactttttgacaacattctctctcatactcacattatactcttattctctctc 6511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 27630898 - 27630981
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  27630898 agaaatgatatttgtacatccattttatgacaattttttgacaactttctctctcatactcacattatattcttattctctctc 27630981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 9314412 - 9314449
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9314412 agaaatgatatttgtacatccattttatgacaattttt 9314449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 8074794 - 8074711
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||| || ||| |  ||||||| ||||||| || |||||||||    
T  8074794 agaaatgatatttgtacaaccactttatgacaattttttaacaattttatatctcatactcacgttatacttttattctctctc 8074711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 20473775 - 20473823
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  20473775 tattgagaaatgatatttgtacaaccattttataacaattttttgacaa 20473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 20995131 - 20995091
Alignment:
Q  221 tttagaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  20995131 tttagaaatgatatttatacatccattttatgacaattttt 20995091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 32174955 - 32175038
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  32174955 agaaatgatattcgtacatccactttgtgacaattttttgacaactttctctctcatactcacattatcctcttattctctctc 32175038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 34473950 - 34474033
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||| || ||| ||||||| |||||||||| |||| | |  |||||||||||| ||||| |||||||||    
T  34473950 agaaatgatatttgtacattcactttgtgacaatcttttgacaattttctctctcatactcacattatcctcttattctctctc 34474033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 26294190 - 26294272
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctat--gttactcacattatactcttcttctctct 304  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||||| |||| |    |||||||||||||||||| ||||||||    
T  26294190 agaaatgatattggtacaaccattttgtgacaactttttgacaattttctctcacatactcacattatactcttattctctct 26294272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 26307447 - 26307529
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctat--gttactcacattatactcttcttctctct 304  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||||| |||| |    |||||||||||||||||| ||||||||    
T  26307447 agaaatgatattggtacaaccattttgtgacaactttttgacaattttctctcacatactcacattatactcttattctctct 26307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 43873761 - 43873718
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  43873761 agaaatgatatttgtacaaccattttgtgacaattttttgacaa 43873718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 31596949 - 31596986
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||||||||    
T  31596949 agaaatgatatttgaacatccattttatgacaattttt 31596986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 3988906 - 3988989
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| | |||| ||||||||||  | |||| |  |||||||||||||||||| |||||||||    
T  3988906 agaaatgatatttgtacaaccactttctaacaaatttttgacaaatttttctctcatactcacattatactcttattctctctc 3988989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 20852920 - 20853003
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||  |||| | |  ||||||| ||||| |||| |||||||||    
T  20852920 agaaatgatatttgtacaaccattttatgataatttttagacaactttctttctcatactcacgttatattcttattctctctc 20853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 21418662 - 21418579
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| ||||||  |||||||||  |||| | |  |||||||||||||||||| |||||||||    
T  21418662 agaaatgatatttgtacaaccactttctgacaaccttttgacaactttctctctcatactcacattatactcttattctctctc 21418579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 41406926 - 41406843
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  |||||| |||||||||||| ||||  |||| | |  |||||||||||| ||||| |||||||||    
T  41406926 agaaatgatatttgtacaatcattttttgacaattttttaacaactttctctctcatactcacattatcctcttattctctctc 41406843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 1332538 - 1332495
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||    
T  1332538 agaaatgataattgtacaaccattttataacaattttttgacaa 1332495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 255
Target Start/End: Complemental strand, 3207481 - 3207450
Alignment:
Q  224 agaaatgatatttgtacatccattttatgaca 255  Q
    ||||||||||||||||||||||||||||||||    
T  3207481 agaaatgatatttgtacatccattttatgaca 3207450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 6161949 - 6161992
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  6161949 agaaatgatatttgtacaaccattttatgacaaccttttgacaa 6161992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 9738763 - 9738681
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||| |||| | |  |||||||||||| || || ||||||||    
T  9738763 agaaatgatatttgtacaaccactttctcacaattttttgacaattttctctctcatactcacattatccttttattctctct 9738681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 10553153 - 10553110
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||    
T  10553153 agaaatgatatttgtacaaccactttctgacaattttttgacaa 10553110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 11223929 - 11223886
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||||||| |||||| || |||||||    
T  11223929 agaaatgatatttgtacatccattttgtgacaacttcttgacaa 11223886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 22767133 - 22767215
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||||||| | |||| ||||||||||| |||| | |  |||||||||||| | ||| ||||||||    
T  22767133 agaaatgatatttgtacaaccattttctcacaactttttgacaattttctctctcatactcacattatccccttattctctct 22767215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 31806300 - 31806343
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| | |||||||||||||||    
T  31806300 agaaatgatatttgtacaaccattttctaacaattttttgacaa 31806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 34996430 - 34996387
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||    
T  34996430 agaaatgatatttgtacaaccactttattacaattttttgacaa 34996387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 28570477 - 28570439
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  28570477 agaaataatatttgtacatccattttatgacgatttttt 28570439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 28578070 - 28578032
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  28578070 agaaataatatttgtacatccattttatgacgatttttt 28578032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 41639858 - 41639820
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  41639858 agaaatgatatttgtacatccattttctaacaatttttt 41639820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 43290935 - 43290897
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  43290935 agaaatgatatttgtacatccactttatgacaacttttt 43290897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 2768148 - 2768213
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattat 289  Q
    |||||||||||||||||| || |||||||| || |||||||||||  ||| |  ||||||||||||    
T  2768148 agaaatgatatttgtacaaccgttttatgataactttttgacaattctctctcatactcacattat 2768213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 3950111 - 3950160
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||| ||||    
T  3950111 agaaatgatatttgtacaaccattttattataattttttgataattttct 3950160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 4658333 - 4658296
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  4658333 agaaatgatatttgaacatccattttatgacaactttt 4658296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 5925056 - 5925093
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  5925056 agaaatgatattcgtacatccattttataacaattttt 5925093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 8841031 - 8841080
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||| ||||    
T  8841031 agaaatgatatttgtacaaccactttgtgagaattttttgacaattttct 8841080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 9208067 - 9208104
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  9208067 agaaatgatatttgaacatccatttaatgacaattttt 9208104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 9985748 - 9985711
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  9985748 agaaatgatatttgtacatctattttatgacaactttt 9985711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 11089756 - 11089723
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||| |||||||||||    
T  11089756 aatgatatttgtacatccatttaatgacaatttt 11089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 12707150 - 12707187
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  12707150 agaaatgatatttgaacatccattttatgacaactttt 12707187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 12783767 - 12783804
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  12783767 agaaatgatatttgaacatccatttaatgacaattttt 12783804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 40380282 - 40380319
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  40380282 agaaatgatatttgtacatctattttatgacaactttt 40380319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 7596961 - 7596878
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatctt--ctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  || ||| |||||| || |||||||| ||  || | ||||||||||||||||||| || ||||||    
T  7596961 agaaatgatatttgtacaatcactttgtgacaacttcttgacaattttatctctcttactcacattatactcttattttctctc 7596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 7678733 - 7678816
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||| ||||||| |||| | |  ||||||||||||| | || |||||||||    
T  7678733 agaaatgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatactcacattatatttttattctctctc 7678816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 10344320 - 10344368
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||| |||||||||||||||||||| ||||||| | ||||||| |||||    
T  10344320 tattgagaaatgatatttgtacatctattttataataatttttggacaa 10344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 11879560 - 11879477
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| ||||| |||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  11879560 agaaatgatatatgtacgtccactttgtgacaactttttgacaactttctctctcatactcacattatcctcttattctctctc 11879477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 11896976 - 11896893
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| ||||| |||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  11896976 agaaatgatatatgtacgtccactttgtgacaactttttgacaactttctctctcatactcacattatcctcttattctctctc 11896893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 12959939 - 12960022
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||| ||| ||| ||| | |||||||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  12959939 agaaatgatatttgcacaaccaatttctaacaattttttgacaactttctttctcatactcacattatattcttattctctctc 12960022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 21273780 - 21273736
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||    
T  21273780 agaaatgatatttgtacaaccattttgtgacaacttcttgacaat 21273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 28927682 - 28927765
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||| ||||| || | | |  |||||||||||| ||||| |||||||||    
T  28927682 agaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatactcacattattctcttattctctctc 28927765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 41305052 - 41304969
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||||  |||| | |  ||||||||||||| | || |||||||||    
T  41305052 agaaatgatatttgtacaaccactttattacaattttatgacaactttctctcttatactcacattatatttttattctctctc 41304969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 41344739 - 41344656
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  || ||| ||| || |||||||||| ||||| | |  |||||| ||||||||||| |||||||||    
T  41344739 agaaatgatatttgtacaatcagtttgtgataactttttgacaaccttctctctcatactcatattatactcttattctctctc 41344656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 42047336 - 42047419
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| | | |||  |||||| |||||||||| |||| | |  |||||||||||||||||| || ||||||    
T  42047336 agaaatgatatttgtacaactactttgggacaatcttttgacaattttctctctcatactcacattatactcttattttctctc 42047419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 42689842 - 42689878
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| |||||||||||| |||||    
T  42689842 agaaatgatatttgtacaaccattttatgacgatttt 42689878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 43420960 - 43420924
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  43420960 aaataatatttgtacaaccattttatgacaatttttt 43420924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 45101397 - 45101480
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| ||| |||||    
T  45101397 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattatcctcttattccctctc 45101480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 49130855 - 49130938
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||| | |  |||||||||||||||||| |||||||||    
T  49130855 agaaatgatatttgtacatttattttatgacaattttttgacaaccttctctttcatactcacattatactcttattctctctc 49130938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 46316025 - 46315942
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| |||||||||| ||||||| |||||||| | |  ||||||||||||| |||| |||||||||    
T  46316025 agaaatgatatttgtacaaccactttatgacaactttttgataatcttctctttcatactcacattatattcttattctctctc 46315942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 49196697 - 49196780
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||| ||| ||||||| |||| | |  |||||||||||||||||| |||||||||    
T  49196697 agaaatgatatttgtacaaccattttgtgacaactttgtgacaattttctctctcatactcacattatactcttattctctctc 49196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 19418227 - 19418178
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  19418227 agaaatgatatttgtacaaccattttatgacaactttttgacaaccttct 19418178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 108432 - 108515
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  108432 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctctcatactcacattatcctcttattctctctc 108515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 1402651 - 1402734
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||||||||||||||||| ||||  |||| ||||| | |  ||||||||||||  |||| |||||||||    
T  1402651 agaaatgatatttgtacatccattttatgacaacttttgtacaaccttctctctcatactcacattatcttcttattctctctc 1402734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 5398919 - 5398999
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||  |||| |  ||||| |||||| ||||| ||||||||    
T  5398919 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctcatactcgcattatcctcttattctctct 5398999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 24537220 - 24537303
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||| ||| |||||| |||||||||| ||||| | |  |||| ||||||| ||||| |||||||||    
T  24537220 agaaatgatatttgtacatccactttgtgacaactttttgacaaccttctttctcatacttacattatcctcttattctctctc 24537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 47849673 - 47849756
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctat--gttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||  |||| |    |||||||||||||||||| |||||||||    
T  47849673 agaaatgatatttgtacaaccattttgtgataattttttgacaactttctcttacatactcacattatactcttattctctctc 47849756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 39604316 - 39604236
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctct 302  Q
    |||||||||||||||||| |||||||   |||||||||||||||  |  ||| | ||||||||||||||||||| ||||||    
T  39604316 agaaatgatatttgtacaaccatttttcaacaattttttgacaactttctctctcttactcacattatactcttattctct 39604236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 1337897 - 1337861
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1337897 agaaatgatatttgaacatccattttatgacaatttt 1337861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 28300287 - 28300370
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||| | |||||||||||||  | |||| |  |||||| |||||| |||| |||||||||    
T  28300287 agaaatgatatttgtacaaccattttattataattttttgacaactttttcttttatactcaaattatattcttattctctctc 28300370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 32457825 - 32457742
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||| ||||||  |||| | |  |||||||||||||||||| |||||||||    
T  32457825 agaaatgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatactcacattatactcttattctctctc 32457742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 41309005 - 41309084
Alignment:
Q  228 atgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||| ||| ||| |||||||||||| ||||| |||| | |  |||||||||||| ||||| |||||||||    
T  41309005 atgatatttgtacaaccactttgtgacaattttttaacaattttctctctcatactcacattatcctcttattctctctc 41309084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 43900827 - 43900744
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  43900827 agaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatattcttattctctctc 43900744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 51032694 - 51032611
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| | |||| ||||||||||| |||| | |  ||||||||||||  |||| |||||||||    
T  51032694 agaaatgatatttgtacaaccattttctaacaactttttgacaattttctctctcatactcacattatcttcttattctctctc 51032611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 35376621 - 35376578
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||    
T  35376621 agaaatgatatttgtacaaccattttgtgacaatttttagacaa 35376578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 37134676 - 37134633
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| | |||||||||||||||||| ||||    
T  37134676 agaaatgatatttgtacaactattttatgacaattttttaacaa 37134633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 43333740 - 43333697
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||    
T  43333740 agaaatgatatttgtacagtcattttatgacaactttttgacaa 43333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 53932461 - 53932418
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||    
T  53932461 agaaatgatatttgtacaaccattttgtgacaatttttggacaa 53932418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 55466959 - 55467002
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||| | |||||||||||||    
T  55466959 agaaatgatatttgtacaaccattttataagaattttttgacaa 55467002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 8839908 - 8839870
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  8839908 tagaaatgatatttgaacatccattttatgaaaattttt 8839870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 2482744 - 2482707
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  2482744 agaaatgatatttgtacatccattttgtgacaactttt 2482707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 8254206 - 8254173
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||| |||||||||||    
T  8254206 aatgatatttgtacatccatttcatgacaatttt 8254173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 20549455 - 20549418
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  20549455 agaaatgatatttgtacatctattttatgataattttt 20549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 24095476 - 24095439
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  24095476 agaaatgatatttgaacatccattttatgataattttt 24095439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 29525234 - 29525271
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  29525234 agaaatgatatttgtacattcattttatgacaactttt 29525271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 37585431 - 37585468
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  37585431 agaaattatatttgtacatctattttatgacaattttt 37585468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 40478179 - 40478212
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||| |||||||||||    
T  40478179 aatgatatttgtacatccatttaatgacaatttt 40478212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 43883313 - 43883350
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaatttt 260  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  43883313 tagaaatgatatttgtacaaccattttttgacaatttt 43883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 50652389 - 50652426
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  50652389 agaaatgatatttgtacaaccattttatgacaactttt 50652426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 52714734 - 52714771
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||||||||| | |||||||||    
T  52714734 agaaatgatatttgtacatccattttctaacaattttt 52714771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 55400000 - 55400037
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  55400000 agaaatgatatttgaacatccattttatgacaactttt 55400037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 462471 - 462388
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||| |||| |||||  |||| | |  ||||||| ||||| |||| |||||||||    
T  462471 agaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactcacgttatattcttattctctctc 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 14992257 - 14992225
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||||||||||| |||||||    
T  14992257 agaaatgatatttgtacatccatttaatgacaa 14992225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 23869037 - 23869001
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  23869037 agaaatgatatttgtacaaccattttataacaatttt 23869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 24645371 - 24645407
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||| |||||||||||||||||| |||||    
T  24645371 aaatgatatttgaacatccattttatgacaacttttt 24645407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 26279885 - 26279956
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactc 293  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  ||||||||||||||||    
T  26279885 agaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactc 26279956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 29373924 - 29373960
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaatttttt 262  Q
    ||||||||||||||||  |||||||||||||||||||    
T  29373924 aaatgatatttgtacaatcattttatgacaatttttt 29373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 31206926 - 31206878
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||| ||||||||||||||||||  |||||| |||||| ||||||||||    
T  31206926 tattcagaaatgatatttgtacaatcattttgtgacaaatttttgacaa 31206878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 36869907 - 36869824
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||| |||| |||||  |||| | |  ||||||||||||| ||||  ||||||||    
T  36869907 agaaatgatatttgtacaaccattttttgacaacttttagacaactttctctctcatactcacattatattcttactctctctc 36869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 44334871 - 44334788
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||  |||| | |  ||||||||||||| | || |||||||||    
T  44334871 agaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatatttttattctctctc 44334788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 48352990 - 48353022
Alignment:
Q  217 tatatttagaaatgatatttgtacatccatttt 249  Q
    |||||| ||||||||||||||||||||||||||    
T  48352990 tatattgagaaatgatatttgtacatccatttt 48353022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 52564704 - 52564668
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  52564704 agaaatgatatttgtacaaccattttgtgacaatttt 52564668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 53871091 - 53871055
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  53871091 agaaatgatatttgaacaaccattttatgacaatttt 53871055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 2013355 - 2013277
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttct 300  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| | |  |||||||||||||||||| ||||    
T  2013355 agaaatgatatttgtacattcattttatgacaattttttgacaaccttctctttcgtactcacattatactcttattct 2013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 1889148 - 1889231
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||  |||| | |  |||||||||||||||||| |||||||||    
T  1889148 agaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattatactcttattctctctc 1889231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 1095895 - 1095859
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||||||||||||||||||    
T  1095895 agaaatgatatttgtacatccattttatgacaatttt 1095859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 10749749 - 10749705
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  10749749 agaaatgatatttgtacaaccattttatgacaatcttttgacaat 10749705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 23345059 - 23344976
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||| |||||||| |||| |||||||||| ||||| | |  || |||||||||||| || |||||||||    
T  23345059 agaaatgatatttgtacattcattttataacaactttttgacaaccttctctctcatattcacattatacttttattctctctc 23344976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 9202586 - 9202543
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  9202586 agaaatgatatttctacaaccattttatgacaattttttgacaa 9202543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 32688619 - 32688541
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactctt 295  Q
    |||| |||||||||||||||||| ||| ||| |||||||||||||||||  |||| | |  ||||||||||||||||||    
T  32688619 tattgagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattatactctt 32688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 43791870 - 43791791
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||||||||||||||| ||||  |||| ||||| |  || |||||||||  |||| |||||||||    
T  43791870 aaatgatatttgtacatccattttatgacaacttttgtacaaccttctctcataatcacattatcttcttattctctctc 43791791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 43994083 - 43994040
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  43994083 agaaatgatagttgtacaaccattttatgacaattttttgacaa 43994040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 6365187 - 6365236
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||| ||||    
T  6365187 agaaatgatatttgtacaaccactttgtgacaattttttgacaattttct 6365236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 15269862 - 15269899
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15269862 agaaatgatatttgaacatccattttatgacaattttt 15269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 4738642 - 4738559
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  || |||||  ||||||||||||  |||| |||||||||    
T  4738642 agaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattatcatcttattctctctc 4738559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 14713987 - 14714070
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||| |||||||||||| ||||  ||||  |||| | |  ||||||||||||| |||| |||||||||    
T  14713987 agaaatgatatttgtacatcaattttatgacaacttttaaacaacattctctctcatactcacattataatcttattctctctc 14714070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 26321767 - 26321684
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| ||| || ||||||||||  || |||||  ||||||||||||  |||| |||||||||    
T  26321767 agaaatgatatttgtacaaccattttgtgataactttttgacaatttcctctatcatactcacattatcatcttattctctctc 26321684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 33296141 - 33296058
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  || |||||  ||||||||||||  |||| |||||||||    
T  33296141 agaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattatcatcttattctctctc 33296058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 7498061 - 7498018
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||    
T  7498061 agaaatgatatttgtacaaccattttattacaactttttgacaa 7498018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 11442673 - 11442716
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| |||||| || |||||||||||||||    
T  11442673 agaaatgatatttgtacaaccatttcattacaattttttgacaa 11442716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 16447314 - 16447267
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  16447314 aaatgatatttgtacaaccattttattacaattttttgataattttct 16447267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 29711980 - 29712023
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||    
T  29711980 agaaatgatatttgaacatccattttgtgacaattttgtgacaa 29712023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 34442114 - 34442157
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||    
T  34442114 agaaatgatatttgtacaaccactttatgataattttttgacaa 34442157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 36587538 - 36587495
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  36587538 agaaatgatatttgaacaaccattttttgacaattttttgacaa 36587495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 7502499 - 7502461
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaattttt 261  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  7502499 tagaaatgatatttgtacaaccattttttgacaattttt 7502461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 34139108 - 34139027
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatct--tctatgttactcacattatactcttcttctctc 303  Q
    |||||||||||||||||||| | ||| ||| |||||||||||||| |  ||| |  |||||||||||| ||||| |||||||    
T  34139108 agaaatgatatttgtacatctactttgtgataattttttgacaattttatctctcatactcacattatcctcttattctctc 34139027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 3299175 - 3299138
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  3299175 agaaatgatatttgtacaaccattttatgacaactttt 3299138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 4062029 - 4061992
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4062029 agaaatgatatttgaacatccatttaatgacaattttt 4061992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 6999138 - 6999101
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  6999138 agaaatgatatttgaacatccattttatgacaactttt 6999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 9634506 - 9634469
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  9634506 agaaatgatatttgaacatccattttatgataattttt 9634469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 13347885 - 13347848
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  13347885 agaaatgatatttgaacatccattttgtgacaattttt 13347848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 13765401 - 13765438
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  13765401 agaaatgatatttgaacatccattttatgacaactttt 13765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 18508079 - 18508108
Alignment:
Q  224 agaaatgatatttgtacatccattttatga 253  Q
    ||||||||||||||||||||||||||||||    
T  18508079 agaaatgatatttgtacatccattttatga 18508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 18723595 - 18723632
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  18723595 agaaatgatatttgaacatccattttgtgacaattttt 18723632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 26206848 - 26206885
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  26206848 agaaatgatatttgaacatctattttatgacaattttt 26206885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 30413624 - 30413657
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||||||| |||||||||||    
T  30413624 aatgatatttgtacatccatttaatgacaatttt 30413657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 30487340 - 30487373
Alignment:
Q  227 aatgatatttgtacatccattttatgacaatttt 260  Q
    ||||||||||||||||||||| ||||||||||||    
T  30487340 aatgatatttgtacatccattctatgacaatttt 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 35965578 - 35965619
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||| ||| ||||| |||||||||||||||    
T  35965578 aaatgatatttgtacaaccactttattacaattttttgacaa 35965619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 44712059 - 44712022
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  44712059 agaaatgatatttgaacatccattttgtgacaattttt 44712022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 694281 - 694317
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  694281 agaaatgatatttgtacaaccattttttgacaatttt 694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 5455523 - 5455440
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||  |||| | |  ||||||||||||  |||| |||||||||    
T  5455523 agaaatgatatttgtacatccactttgtgacaaccttttgacaactttctctcttatactcacattatcttcttattctctctc 5455440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 6511615 - 6511579
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  6511615 agaaatgatatttggacatccattttgtgacaatttt 6511579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 11980652 - 11980735
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| | |||| ||||||||||  || ||| |  ||||||||||||  |||| |||||||||    
T  11980652 agaaatgatatttgtacaaccattttctaacaactttttgacaactttttatctcatactcacattatcttcttattctctctc 11980735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 12600049 - 12600132
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| ||| |||||| ||||||  |||| | |  ||||||||||||||| || |||||||||    
T  12600049 agaaatgatatttgtacaaccactttgtgataattttgtgacaactttctctctcatactcacattatactattattctctctc 12600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 15141474 - 15141506
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||||| ||||||||||||    
T  15141474 agaaatgatatttgtacatctattttatgacaa 15141506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 22390153 - 22390236
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  || | |||||||| ||||||||||  |||| | |  |||| ||||||||||||| |||||||||    
T  22390153 agaaatgatatttgtacaatcactctatgacaactttttgacaacattctctctcatacttacattatactcttattctctctc 22390236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 26321935 - 26321891
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||||| ||||||| ||| || |||||||||||    
T  26321935 agaaatgatatttgtacaaccattttgtgataactttttgacaat 26321891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 28165130 - 28165213
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||| ||||||| ||||||| |||||| |||| |||||| |||| | |  ||||||||||||| ||||  ||||||||    
T  28165130 agaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactcacattatattcttaatctctctc 28165213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 35171296 - 35171260
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  35171296 agaaatgatatttgtacaaccattttgtgacaatttt 35171260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 41056884 - 41056813
Alignment:
Q  232 tatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctc 301  Q
    |||||||||| ||| ||||||| || |||||||||||||||| | |  ||||||| |||||||||| |||||    
T  41056884 tatttgtacaaccactttatgataactttttgacaatcttctctctcatactcacgttatactcttattctc 41056813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 7990080 - 7990162
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctct 304  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||| |||| | |  |||||||||||||||||| ||||||||    
T  7990080 agaaatgatatttgtacatctattttatgataattttttgataattttctctcttatactcacattatactcttattctctct 7990162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 30862641 - 30862720
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||  ||| ||||||| |||||||||||||| |||| |  |||||||||||||||||| |||||||||    
T  30862641 aaatgatatttgtactaccactttatgataattttttgacaattttctctcatactcacattatactcttattctctctc 30862720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 30447359 - 30447444
Alignment:
Q  224 agaaatgatatttgtacatccat--tttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| || |||  |||||||||| |||||||||||||||| | |  |||||||||||||||||| |||||||||    
T  30447359 agaaatgatatttgtagattcatattttatgacaactttttgacaatcttctctctcatactcacattatactcttattctctctc 30447444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 2790178 - 2790261
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||  |||| | |  |||||||||||||||||| |||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaactttctctctcatactcacattatactcttattctctctc 2790261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 16567317 - 16567400
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||| | || ||||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  16567317 agaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattcttattctctctc 16567400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 16598345 - 16598262
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||| | || ||||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  16598345 agaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattcttattctctctc 16598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 19426581 - 19426664
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  19426581 agaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattatcctcttattctctctc 19426664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 40842406 - 40842489
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  40842406 agaaatgatatttgtacatccactttgtgacaatcttttgacaactttctctctcatactcacattatcctcttattctctctc 40842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 44894543 - 44894460
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||||||||||| || ||||||||||  |||| | |  |||||| ||||||||| | |||||||||    
T  44894543 agaaatgatatttgtacatccattttatgataactttttgacaacattctttctcatactcatattatactcatattctctctc 44894460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 42663085 - 42663128
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  42663085 agaaatgatatttgtacatccattttgtgacaactttttgacaa 42663128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 3247070 - 3247137
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattat 289  Q
    ||||||||||||||||||  |||||  |||||||||||||||||| |||||| |  ||||||||||||    
T  3247070 agaaatgatatttgtacaatcatttagtgacaattttttgacaattttctatttcatactcacattat 3247137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 26153647 - 26153729
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| | ||||||||||||  |||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  26153647 agaaatgatatttgtacaactattttatgacaa-cttttgacaattttctctctcatactcacattatattcttattctctctc 26153729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 28862140 - 28862108
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||||||||||||||||||    
T  28862140 agaaatgatatttgtacatccattttatgacaa 28862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 33212043 - 33212086
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| | |||||||||||||||    
T  33212043 agaaatgatatttgtacaaccattttctaacaattttttgacaa 33212086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 38096509 - 38096466
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||    
T  38096509 agaaataatatttgtacaaccattttgtgacaattttttgacaa 38096466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 41966333 - 41966376
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||    
T  41966333 agaaatgatatttgtacaaccactttgtgacaattttttgacaa 41966376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 3343400 - 3343350
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt-tgacaatcttct 273  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||| ||||    
T  3343400 agaaatgatatttgaacattcattttatgacaatttttgtgacaattttct 3343350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 31436422 - 31436464
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaat 268  Q
    |||||||||||||||| ||||||| |||||| |||||||||||    
T  31436422 aaatgatatttgtacaaccattttttgacaactttttgacaat 31436464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 34304746 - 34304665
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| | ||||| ||||||||||| |||||| |||| | |  ||||||||||||| ||||  ||||||||    
T  34304746 aaatgatatttgtacaactattttttgacaatttttagacaattttctctctcatactcacattatattcttactctctctc 34304665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 6353721 - 6353762
Alignment:
Q  219 tatttagaaatgatatttgtacatccattttatgacaatttt 260  Q
    |||| |||||||||||||||||| ||||||| ||||||||||    
T  6353721 tattgagaaatgatatttgtacaaccattttttgacaatttt 6353762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 22692085 - 22692122
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  22692085 agaaatgatatttgtacaaccattttatgacaactttt 22692122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 23329903 - 23329952
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||| ||||||||| ||||||||| | |||||||||||||| ||||    
T  23329903 agaaatgacatttgtacaaccattttattataattttttgacaattttct 23329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 26041489 - 26041460
Alignment:
Q  227 aatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||||||||||||||||    
T  26041489 aatgatatttgtacatccattttatgacaa 26041460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 30818067 - 30818030
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  30818067 agaaatgatatttgtacaaccattttatgacaactttt 30818030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 31364954 - 31364905
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||| ||||    
T  31364954 agaaatgatatttgtacgaccactttattacaattttttgacaattttct 31364905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 35004135 - 35004164
Alignment:
Q  227 aatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||||||||||||||||    
T  35004135 aatgatatttgtacatccattttatgacaa 35004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 35823045 - 35823008
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||||||||| | |||||||||    
T  35823045 agaaatgatatttgtacatccattttctaacaattttt 35823008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 37899283 - 37899246
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  37899283 agaaatgatatttgaacatccattttgtgacaattttt 37899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 41893916 - 41893953
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  41893916 agaaatgatatttgaacatccattttatgacaactttt 41893953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 42194954 - 42194906
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||||    
T  42194954 agaaatgatatttgtacattca-tttgtgacaattttttgacaattttct 42194906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 44511318 - 44511289
Alignment:
Q  227 aatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||||||||||||||||    
T  44511318 aatgatatttgtacatccattttatgacaa 44511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 48383388 - 48383351
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  48383388 agaaatgatatttgtacaaccattttattacaattttt 48383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 2005733 - 2005773
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttga 264  Q
    |||||||||||||||||| || |||||| ||||||||||||    
T  2005733 agaaatgatatttgtacaacccttttataacaattttttga 2005773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 7807056 - 7807139
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| ||| || ||||| ||||  | |||| |  |||||||||||| ||||| |||||||||    
T  7807056 agaaatgatatttgtacacccattttgtgataaattttttacaactttttctctcatactcacattattctcttattctctctc 7807139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 34349097 - 34349014
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| |||||||   |||| ||||||||||| |||| | |  |||||||||||||  ||| |||||||||    
T  34349097 agaaatgatatttgtacaaccatttttgtacaactttttgacaattttctctctcatactcacattatatccttattctctctc 34349014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 34992394 - 34992362
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||| ||||||||||||||    
T  34992394 agaaatgatatttgtacaaccattttatgacaa 34992362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 41890529 - 41890577
Alignment:
Q  225 gaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||| |||||   |||||||||||||||| ||||    
T  41890529 gaaatgatatttgtacatcaattttgcaacaattttttgacaattttct 41890577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 43171243 - 43171211
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaa 256  Q
    |||||||||||||||||| ||||||||||||||    
T  43171243 agaaatgatatttgtacaaccattttatgacaa 43171211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 46651673 - 46651756
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| |||||| | | |||||||||||||||| ||||  |||| | |  ||||||||||||||| || |||||||||    
T  46651673 agaaatgatatatgtacaactactttatgacaattttttaacaactttctctctcatactcacattatacttttattctctctc 46651756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 27340 - 27423
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| |||||||||||||| |||||||||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  27340 agaaatgatatatgtacatccattttgtgacaattttttgacaactttctctctcatactcacattatcctcttattctctctc 27423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 4316 - 4399
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||||| || ||||||||||  |||||| |  ||||||||||||| |||| |||||||||    
T  4316 agaaatgatatttgtacaaccattttatgataactttttgacaactttctatctcatactcacattatattcttattctctctc 4399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 9918 - 9869
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||  |||||| | |||||||||||||||| ||||    
T  9918 agaaatgatatttgtacaatcattttttcacaattttttgacaattttct 9869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 30420627 - 30420676
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  30420627 agaaatgatatttgtacatccattttatgataatttttgtacaatcttct 30420676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 12662017 - 12661934
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||| ||| |||||||||||||||||  |||| | |  |||||||||||| || || |||||||||    
T  12662017 agaaatgatatttgtacatccactttgtgacaattttttgacaactttctctctcatactcacattatccttttattctctctc 12661934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 38500944 - 38501027
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||| | |  |||||| ||||||||||| |||| ||||    
T  38500944 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctctttcatactcatattatactcttattctttctc 38501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 34400619 - 34400668
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||  ||||||||||||||||||| |||| |||||    
T  34400619 agaaatgatatttgtacaatcattttatgacaattttttaacaaccttct 34400668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 12349782 - 12349865
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgtta--ctcacattatactcttcttctctctc 305  Q
    |||||||||| ||||||  ||||||| |||||| ||| ||||||  |||||| |||  |||||||||||||||| |||||||||    
T  12349782 agaaatgatacttgtacgaccattttttgacaactttgtgacaactttctatcttatactcacattatactcttattctctctc 12349865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 26660481 - 26660398
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||||||| |||||| || |||||||  |||| | |  ||||||||||||| | || |||||||||    
T  26660481 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatatttttattctctctc 26660398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 26932073 - 26931990
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||||||||||| |||||| || |||||||  |||| | |  ||||||||||||| | || |||||||||    
T  26932073 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatatttttattctctctc 26931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 27340870 - 27340953
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||  || ||||| | |||||||||||||| |||| | |  ||||||||||||| |||| |||||||||    
T  27340870 agaaatgatatttgtacaatcactttattataattttttgacaattttctctctcatactcacattatattcttattctctctc 27340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 34381013 - 34381096
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  34381013 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattattctcttattctctctc 34381096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 34767485 - 34767402
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||| |||||||| |||||||||| || ||||||| ||| |||| | |  |||||||||||||||||| |||| ||||    
T  34767485 agaaatgatagttgtacattcattttatgataaatttttgataatattctctctcatactcacattatactcttattctatctc 34767402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 255
Target Start/End: Original strand, 4820156 - 4820187
Alignment:
Q  224 agaaatgatatttgtacatccattttatgaca 255  Q
    ||||||||||||||||||||||||||||||||    
T  4820156 agaaatgatatttgtacatccattttatgaca 4820187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 8897383 - 8897426
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  8897383 agaaatgatatttgtacaaccattttatgacaaccttttgacaa 8897426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 20125390 - 20125433
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||    
T  20125390 agaaatgatatttgtacaaccactttattacaattttttgacaa 20125433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 20591544 - 20591501
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||    
T  20591544 agaaatgatatatgtacatccactttttgacaattttttgacaa 20591501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 24431687 - 24431605
Alignment:
Q  225 gaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||| |||| | |  |||||| ||||| ||||| |||||||||    
T  24431687 gaaatgatatttgtacaaccactttaagacaactttttgacaattttctctctcatactcatattatcctcttgttctctctc 24431605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 31708371 - 31708414
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||    
T  31708371 agaaatgatatttgtacaaccattttataacaactttttgacaa 31708414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 36416132 - 36416089
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||| | |||||||||||||||    
T  36416132 agaaatgatatttgtacaaccattttctaacaattttttgacaa 36416089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 2456027 - 2456108
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctc 303  Q
    ||||||||||| | |||| | ||||||| |||||||||||||||  |||||| |  ||||||||||||| |||| |||||||    
T  2456027 agaaatgatatctatacaactattttataacaattttttgacaactttctatctcatactcacattatattcttattctctc 2456108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 3141498 - 3141579
Alignment:
Q  226 aaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||| |||| ||| ||| |||||||||||||||||  || |||||  ||||||||||||  |||| |||||||||    
T  3141498 aaatgatatttatacaaccactttgtgacaattttttgacaacttcctctatcatactcacattatcatcttattctctctc 3141579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 4434483 - 4434521
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  4434483 agaaatgatatttgtacaaccattttttgacaatttttt 4434521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 30334831 - 30334789
Alignment:
Q  218 atatttagaaatgatatttgtacatccattttatgacaatttt 260  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||    
T  30334831 atattgagaaatgatatttgtacaaccactttatgacaatttt 30334789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 31025076 - 31024995
Alignment:
Q  223 tagaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctct 302  Q
    ||||||||||||||||||| |||  ||||||||||||||| ||||  |||| | |  ||||||||||||| |||| ||||||    
T  31025076 tagaaatgatatttgtacaaccacattatgacaattttttaacaactttctctctcatactcacattatattcttattctct 31024995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 4088444 - 4088481
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  4088444 agaaatgatatttgtacatccattttataacaactttt 4088481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 6517713 - 6517750
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  6517713 agaaatgatatttgaacatccattttatgacaactttt 6517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 9599660 - 9599689
Alignment:
Q  227 aatgatatttgtacatccattttatgacaa 256  Q
    ||||||||||||||||||||||||||||||    
T  9599660 aatgatatttgtacatccattttatgacaa 9599689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 10649436 - 10649473
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  10649436 agaaatgatatttgaacatccattttatgacaactttt 10649473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 19840056 - 19840019
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  19840056 agaaatgatatttgaacattcattttatgacaattttt 19840019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 21012569 - 21012606
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  21012569 agaaattatatttgtacaaccattttatgacaattttt 21012606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 25871516 - 25871479
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  25871516 agaaatgatatttgaacatccattttgtgacaattttt 25871479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 28501593 - 28501630
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  28501593 agaaatgatatttgtacaaccattttgtgacaattttt 28501630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 34124622 - 34124659
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  34124622 agaaatgatatttgaacatccattttatgataattttt 34124659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 38704267 - 38704230
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  38704267 agaaatgatatttgaacatccattttatgataattttt 38704230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 6529020 - 6529103
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctctc 305  Q
    ||||||||||||||||||   ||||| | |||||||||||||||  | |||| |  ||||||| |||||||||| |||||||||    
T  6529020 agaaatgatatttgtacaattattttctaacaattttttgacaactttttctctcatactcacgttatactcttattctctctc 6529103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 33743403 - 33743320
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||| | ||| ||||| |||||||||||||||  |||| | |  |||| |||||||| |||| |||||||||    
T  33743403 agaaatgatatttgtataaccactttattacaattttttgacaactttctctctcatacttacattatattcttattctctctc 33743320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 39191904 - 39191821
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    ||||||||||| |||||||||| ||| | |||||||||||||||  |||| | |  ||||||||||||| ||||  ||||||||    
T  39191904 agaaatgatatatgtacatccactttttaacaattttttgacaactttctctcttatactcacattatattcttaatctctctc 39191821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 39595273 - 39595356
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||  |||| | |  ||||||| |||| ||||| |||||||||    
T  39595273 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacgttattctcttattctctctc 39595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 40223855 - 40223772
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||| ||||||||||| ||| ||| |||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  40223855 agaaattatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattatcctcttattctctctc 40223772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 42699058 - 42699098
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttga 264  Q
    |||||||||||||||||| ||||||| |||||| |||||||    
T  42699058 agaaatgatatttgtacaaccattttgtgacaactttttga 42699098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 155907 - 155990
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||  |||| | |  ||||||||||||| |||| |||||||||    
T  155907 agaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcgtactcacattatattcttattctctctc 155990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 10805 - 10723
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa--tcttctatgttactcacattatactcttcttctctct 304  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||  | |||| |  ||||||||||||| |||| ||||||||    
T  10805 agaaatgatatttgtacaaccactttattacaattttttgacaactttttctctcatactcacattatattcttattctctct 10723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 15607 - 15555
Alignment:
Q  221 tttagaaatgatatttgtacatccattttatgacaattttttgacaatcttct 273  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||| ||||    
T  15607 tttagaaatgatatttgtacaaccactttgtgacaactttttgacaattttct 15555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 199267 - 199350
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||  |||| | |  ||||||||||||| |||| || ||||||    
T  199267 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatattcttattatctctc 199350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 9454 - 9497
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||    
T  9454 agaaatgatatttgtacaaccactttatgacaatttgttgacaa 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 38880 - 38962
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctat--gttactcacattatactcttcttctctct 304  Q
    |||||| ||||||||||| ||| ||| |||||||||||||| ||| |||| |    |||||||||||||||||| ||||||||    
T  38880 agaaataatatttgtacaaccactttgtgacaattttttgaaaattttctctcatatactcacattatactcttattctctct 38962  T

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Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 21695 - 21655
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttga 264  Q
    ||||||||||||| |||| ||||||||| ||||||||||||    
T  21695 agaaatgatatttttacaaccattttattacaattttttga 21655  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 60470 - 60513
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaa 267  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||    
T  60470 agaaatgatatttgtacaaccattttattacaactttttgacaa 60513  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 14610 - 14572
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaatttttt 262  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  14610 agaaatgatatttgtacagccattttattacaatttttt 14572  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 25704 - 25741
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttt 261  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  25704 agaaatgatatttgtacaaccactttatgacaattttt 25741  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 204515 - 204450
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgttactcacattat 289  Q
    |||||||||||||||||||| ||||| |||||| ||||  |||| ||||| |  ||||||||||||    
T  204515 agaaatgatatttgtacatctattttctgacaacttttgtacaaccttctctcatactcacattat 204450  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 6818 - 6901
Alignment:
Q  224 agaaatgatatttgtacatccattttatgacaattttttgacaatcttctatgt--tactcacattatactcttcttctctctc 305  Q
    |||||||||||||| |||  || |||||||||| ||||||||||  |||| | |  |||||||||||| ||||| |||||||||    
T  6818 agaaatgatatttggacaatcaatttatgacaactttttgacaactttctctctcatactcacattatcctcttattctctctc 6901  T

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