View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6885_high_4 (Length: 379)

Name: NF6885_high_4
Description: NF6885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6885_high_4
NF6885_high_4
[»] chr2 (39 HSPs)
chr2 (318-379)||(31266350-31266411)
chr2 (318-379)||(41637614-41637675)
chr2 (318-379)||(29749481-29749542)
chr2 (318-379)||(30783334-30783395)
chr2 (318-379)||(27523007-27523068)
chr2 (318-379)||(8430292-8430353)
chr2 (318-379)||(18551331-18551392)
chr2 (318-379)||(18916478-18916539)
chr2 (318-379)||(23388456-23388517)
chr2 (322-379)||(27327616-27327673)
chr2 (318-379)||(28262360-28262421)
chr2 (318-379)||(28841420-28841481)
chr2 (318-379)||(32185828-32185889)
chr2 (318-379)||(32300447-32300508)
chr2 (318-379)||(1141532-1141593)
chr2 (318-379)||(13788133-13788194)
chr2 (330-379)||(14757199-14757248)
chr2 (318-379)||(15636813-15636874)
chr2 (318-379)||(21293789-21293850)
chr2 (318-379)||(26687769-26687830)
chr2 (318-379)||(32008948-32009009)
chr2 (318-379)||(41736168-41736229)
chr2 (323-379)||(28319657-28319713)
chr2 (320-379)||(44722930-44722989)
chr2 (318-379)||(8763630-8763691)
chr2 (318-379)||(20065152-20065213)
chr2 (318-379)||(22140442-22140503)
chr2 (318-379)||(29998637-29998698)
chr2 (330-379)||(36550844-36550893)
chr2 (318-379)||(37724070-37724131)
chr2 (318-379)||(37802456-37802517)
chr2 (318-379)||(40018798-40018859)
chr2 (331-379)||(13613171-13613219)
chr2 (327-379)||(43408589-43408641)
chr2 (318-365)||(22192188-22192235)
chr2 (324-379)||(35697458-35697512)
chr2 (318-371)||(24117315-24117368)
chr2 (318-367)||(44366087-44366136)
chr2 (318-366)||(27058407-27058455)
[»] scaffold0058 (1 HSPs)
scaffold0058 (318-379)||(74619-74680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (318-379)||(58582-58643)
[»] chr8 (46 HSPs)
chr8 (318-379)||(17103943-17104004)
chr8 (318-379)||(17824694-17824755)
chr8 (318-379)||(37992097-37992158)
chr8 (318-379)||(24576102-24576163)
chr8 (318-379)||(3823131-3823192)
chr8 (318-379)||(6816461-6816522)
chr8 (318-379)||(8555382-8555443)
chr8 (318-379)||(17810296-17810357)
chr8 (318-379)||(18010138-18010199)
chr8 (318-379)||(27910842-27910903)
chr8 (318-379)||(27957261-27957322)
chr8 (318-379)||(29350921-29350982)
chr8 (321-379)||(29345072-29345130)
chr8 (318-379)||(4330976-4331037)
chr8 (330-379)||(22939323-22939372)
chr8 (318-379)||(24193274-24193335)
chr8 (330-379)||(27869248-27869297)
chr8 (318-379)||(33652565-33652626)
chr8 (318-379)||(43431637-43431698)
chr8 (327-379)||(13061009-13061061)
chr8 (327-379)||(26399085-26399137)
chr8 (327-379)||(32247916-32247968)
chr8 (328-379)||(5670247-5670298)
chr8 (328-379)||(11938753-11938804)
chr8 (328-379)||(19256220-19256271)
chr8 (328-379)||(24636660-24636711)
chr8 (318-379)||(4647833-4647894)
chr8 (318-379)||(5879202-5879263)
chr8 (318-379)||(6817052-6817113)
chr8 (318-379)||(9915118-9915179)
chr8 (318-379)||(19240865-19240926)
chr8 (318-379)||(19314049-19314110)
chr8 (327-379)||(19493733-19493786)
chr8 (318-379)||(21350476-21350537)
chr8 (318-379)||(40289499-40289559)
chr8 (327-379)||(10917834-10917886)
chr8 (327-379)||(19488139-19488191)
chr8 (327-379)||(31399586-31399638)
chr8 (318-365)||(18844636-18844683)
chr8 (332-379)||(33413048-33413095)
chr8 (318-376)||(32961657-32961715)
chr8 (350-379)||(8824855-8824884)
chr8 (318-379)||(15251601-15251661)
chr8 (350-379)||(30687966-30687995)
chr8 (318-379)||(31344250-31344311)
chr8 (327-379)||(25273405-25273457)
[»] chr7 (51 HSPs)
chr7 (318-379)||(36636506-36636567)
chr7 (318-379)||(40847513-40847574)
chr7 (318-379)||(816269-816330)
chr7 (318-379)||(1907355-1907416)
chr7 (318-379)||(2457670-2457731)
chr7 (318-379)||(15014483-15014544)
chr7 (318-379)||(24605838-24605899)
chr7 (318-379)||(27806018-27806079)
chr7 (318-379)||(28800878-28800939)
chr7 (318-379)||(39979702-39979763)
chr7 (318-379)||(47523728-47523789)
chr7 (318-379)||(10050914-10050975)
chr7 (318-379)||(11036507-11036568)
chr7 (318-379)||(20174020-20174081)
chr7 (318-379)||(20429465-20429526)
chr7 (318-379)||(20924036-20924097)
chr7 (318-379)||(22486394-22486455)
chr7 (318-379)||(22501594-22501655)
chr7 (318-379)||(23232039-23232100)
chr7 (318-379)||(23577267-23577328)
chr7 (318-379)||(31425589-31425650)
chr7 (318-379)||(37135363-37135424)
chr7 (318-379)||(42926498-42926559)
chr7 (322-376)||(38057636-38057690)
chr7 (318-379)||(7733390-7733451)
chr7 (318-379)||(9698616-9698677)
chr7 (330-379)||(15969796-15969845)
chr7 (318-379)||(21917412-21917473)
chr7 (318-379)||(23750814-23750875)
chr7 (318-379)||(31042251-31042312)
chr7 (318-379)||(45664768-45664829)
chr7 (327-379)||(26577274-26577326)
chr7 (332-379)||(33427704-33427751)
chr7 (321-379)||(32267350-32267408)
chr7 (322-379)||(1842898-1842955)
chr7 (318-379)||(11890225-11890286)
chr7 (318-379)||(18217829-18217890)
chr7 (318-379)||(24140450-24140511)
chr7 (318-379)||(36993820-36993881)
chr7 (327-379)||(1824278-1824330)
chr7 (327-379)||(3904556-3904608)
chr7 (327-379)||(4514774-4514826)
chr7 (331-379)||(11852021-11852069)
chr7 (328-379)||(21623031-21623082)
chr7 (337-379)||(2650906-2650948)
chr7 (318-379)||(6849289-6849350)
chr7 (322-379)||(25777190-25777247)
chr7 (318-379)||(48933136-48933197)
chr7 (327-379)||(2093440-2093492)
chr7 (327-379)||(3872265-3872317)
chr7 (349-377)||(5235420-5235448)
[»] chr6 (61 HSPs)
chr6 (318-379)||(11530225-11530286)
chr6 (318-379)||(14886561-14886622)
chr6 (318-379)||(2992615-2992676)
chr6 (318-379)||(9892963-9893024)
chr6 (318-379)||(12845003-12845064)
chr6 (318-379)||(12951708-12951769)
chr6 (318-379)||(18033603-18033664)
chr6 (318-379)||(22083838-22083899)
chr6 (318-379)||(27796912-27796973)
chr6 (318-379)||(6598464-6598525)
chr6 (318-379)||(12160924-12160985)
chr6 (318-379)||(12680262-12680323)
chr6 (318-379)||(20182145-20182206)
chr6 (318-379)||(21140939-21141000)
chr6 (318-375)||(21990256-21990313)
chr6 (318-379)||(22153785-22153846)
chr6 (318-379)||(22579427-22579488)
chr6 (318-379)||(25398002-25398063)
chr6 (330-379)||(26224440-26224489)
chr6 (330-379)||(26939599-26939648)
chr6 (318-379)||(27705422-27705483)
chr6 (318-379)||(28364911-28364972)
chr6 (327-379)||(14872128-14872180)
chr6 (318-379)||(495705-495766)
chr6 (318-379)||(9885243-9885304)
chr6 (330-379)||(11049829-11049878)
chr6 (318-379)||(12200694-12200755)
chr6 (318-379)||(15364536-15364597)
chr6 (318-379)||(23281786-23281847)
chr6 (318-379)||(24661087-24661148)
chr6 (327-379)||(11077658-11077710)
chr6 (321-379)||(12205263-12205321)
chr6 (318-379)||(1939320-1939381)
chr6 (318-379)||(5270392-5270453)
chr6 (318-379)||(11431718-11431779)
chr6 (318-379)||(12351664-12351725)
chr6 (318-379)||(14036620-14036681)
chr6 (318-379)||(18048788-18048849)
chr6 (318-379)||(21691574-21691635)
chr6 (330-379)||(33250786-33250835)
chr6 (327-379)||(5192267-5192319)
chr6 (327-379)||(6605574-6605626)
chr6 (319-379)||(12157454-12157514)
chr6 (328-379)||(15448395-15448446)
chr6 (318-376)||(343644-343702)
chr6 (341-379)||(6978300-6978338)
chr6 (349-379)||(15509187-15509217)
chr6 (318-379)||(2669309-2669370)
chr6 (318-379)||(9060091-9060151)
chr6 (318-379)||(16250880-16250941)
chr6 (350-379)||(17919568-17919597)
chr6 (338-379)||(18492389-18492430)
chr6 (318-367)||(22055702-22055751)
chr6 (327-379)||(5360418-5360470)
chr6 (327-379)||(11350191-11350243)
chr6 (327-379)||(12499225-12499277)
chr6 (327-379)||(12506554-12506606)
chr6 (327-379)||(12509624-12509676)
chr6 (327-379)||(13145011-13145063)
chr6 (327-379)||(20692889-20692941)
chr6 (327-379)||(33547555-33547607)
[»] chr5 (51 HSPs)
chr5 (318-379)||(27428090-27428151)
chr5 (318-379)||(33818639-33818700)
chr5 (318-379)||(618294-618355)
chr5 (318-379)||(16121917-16121978)
chr5 (318-379)||(23423834-23423895)
chr5 (318-379)||(7888797-7888858)
chr5 (318-379)||(10420330-10420391)
chr5 (318-379)||(12328304-12328365)
chr5 (318-379)||(17039709-17039770)
chr5 (318-379)||(17079405-17079466)
chr5 (318-379)||(20959508-20959569)
chr5 (318-379)||(23408980-23409041)
chr5 (318-379)||(23975635-23975696)
chr5 (318-379)||(33816836-33816897)
chr5 (327-379)||(25397866-25397918)
chr5 (322-376)||(5982649-5982703)
chr5 (330-379)||(2472792-2472841)
chr5 (318-379)||(8108938-8108999)
chr5 (318-379)||(8886929-8886990)
chr5 (318-379)||(11927864-11927925)
chr5 (318-379)||(12045727-12045788)
chr5 (318-379)||(13620205-13620266)
chr5 (318-379)||(13974156-13974217)
chr5 (318-379)||(15060973-15061034)
chr5 (318-379)||(17986729-17986790)
chr5 (318-379)||(25673306-25673367)
chr5 (318-375)||(29727928-29727985)
chr5 (330-379)||(35620421-35620470)
chr5 (318-379)||(36196394-36196455)
chr5 (327-379)||(746946-746998)
chr5 (318-375)||(3080778-3080835)
chr5 (318-379)||(36716278-36716339)
chr5 (318-379)||(36831968-36832029)
chr5 (327-379)||(10494746-10494798)
chr5 (327-379)||(17772046-17772098)
chr5 (327-379)||(40484053-40484105)
chr5 (328-379)||(22649407-22649458)
chr5 (328-379)||(24138919-24138970)
chr5 (328-379)||(26708663-26708714)
chr5 (328-379)||(26978397-26978448)
chr5 (318-379)||(7003808-7003867)
chr5 (329-379)||(17036490-17036540)
chr5 (321-379)||(25652661-25652719)
chr5 (337-379)||(31853166-31853208)
chr5 (350-379)||(16631952-16631981)
chr5 (350-379)||(28265553-28265582)
chr5 (318-379)||(32726804-32726865)
chr5 (327-379)||(4125266-4125318)
chr5 (327-375)||(16464687-16464735)
chr5 (327-379)||(36597418-36597470)
chr5 (327-379)||(38837749-38837801)
[»] chr4 (45 HSPs)
chr4 (318-379)||(5399607-5399668)
chr4 (318-379)||(25147719-25147780)
chr4 (318-379)||(1638445-1638506)
chr4 (318-379)||(2275756-2275817)
chr4 (318-379)||(22156679-22156740)
chr4 (318-379)||(33914057-33914118)
chr4 (318-379)||(37378701-37378762)
chr4 (322-379)||(37761920-37761977)
chr4 (318-379)||(5473847-5473908)
chr4 (318-379)||(8878881-8878942)
chr4 (318-379)||(18051837-18051898)
chr4 (318-379)||(18744148-18744209)
chr4 (318-379)||(19839177-19839238)
chr4 (318-379)||(22128390-22128451)
chr4 (318-379)||(27040103-27040164)
chr4 (318-379)||(32175815-32175876)
chr4 (318-379)||(46286307-46286368)
chr4 (318-379)||(55309291-55309352)
chr4 (318-379)||(12071960-12072021)
chr4 (318-379)||(13564993-13565054)
chr4 (318-379)||(22168266-22168327)
chr4 (318-379)||(30269066-30269127)
chr4 (318-379)||(30283062-30283123)
chr4 (318-379)||(36689675-36689736)
chr4 (318-379)||(45532657-45532718)
chr4 (327-379)||(12105990-12106042)
chr4 (327-379)||(29625332-29625384)
chr4 (328-379)||(4586836-4586887)
chr4 (328-379)||(13028894-13028945)
chr4 (337-379)||(9059030-9059072)
chr4 (321-379)||(9913259-9913317)
chr4 (321-379)||(38223511-38223569)
chr4 (322-379)||(19680502-19680559)
chr4 (327-379)||(14944753-14944805)
chr4 (327-379)||(38619854-38619906)
chr4 (328-379)||(25026565-25026616)
chr4 (318-377)||(30420113-30420172)
chr4 (328-379)||(45091282-45091333)
chr4 (318-379)||(16915367-16915428)
chr4 (350-379)||(18714932-18714961)
chr4 (350-379)||(30508017-30508046)
chr4 (327-379)||(4606907-4606959)
chr4 (327-371)||(9239367-9239411)
chr4 (327-379)||(9670557-9670609)
chr4 (327-379)||(38645757-38645809)
[»] chr3 (77 HSPs)
chr3 (318-379)||(49915447-49915508)
chr3 (319-379)||(19610335-19610395)
chr3 (321-379)||(23217286-23217344)
chr3 (134-275)||(4704074-4704215)
chr3 (318-379)||(16299857-16299918)
chr3 (318-379)||(18104608-18104669)
chr3 (318-379)||(25882566-25882627)
chr3 (318-379)||(29215988-29216049)
chr3 (318-379)||(30219334-30219395)
chr3 (318-379)||(1628211-1628272)
chr3 (318-379)||(4393428-4393489)
chr3 (318-379)||(8428167-8428228)
chr3 (318-379)||(9652574-9652635)
chr3 (318-379)||(11007761-11007822)
chr3 (318-379)||(11219134-11219195)
chr3 (318-379)||(11915754-11915815)
chr3 (318-379)||(17582379-17582440)
chr3 (318-379)||(17762638-17762699)
chr3 (318-379)||(18091625-18091686)
chr3 (318-379)||(18539800-18539861)
chr3 (318-379)||(19063958-19064019)
chr3 (241-290)||(23255485-23255534)
chr3 (318-379)||(26830520-26830581)
chr3 (318-379)||(27449084-27449145)
chr3 (318-379)||(28389969-28390030)
chr3 (318-379)||(36543745-36543806)
chr3 (327-379)||(26098818-26098870)
chr3 (321-379)||(31250087-31250145)
chr3 (318-379)||(5260933-5260994)
chr3 (318-379)||(7623609-7623670)
chr3 (318-379)||(8543465-8543526)
chr3 (318-379)||(19223445-19223506)
chr3 (318-379)||(19269942-19270003)
chr3 (318-379)||(19545506-19545567)
chr3 (318-379)||(26390712-26390773)
chr3 (328-377)||(27182736-27182785)
chr3 (318-379)||(27212859-27212920)
chr3 (318-379)||(27968911-27968972)
chr3 (319-379)||(1311037-1311097)
chr3 (327-379)||(5744421-5744473)
chr3 (327-379)||(5781380-5781432)
chr3 (327-379)||(13921330-13921382)
chr3 (327-379)||(15064070-15064122)
chr3 (318-378)||(36564518-36564578)
chr3 (327-379)||(50665714-50665766)
chr3 (332-379)||(11837292-11837339)
chr3 (328-379)||(29236050-29236101)
chr3 (328-379)||(48404866-48404917)
chr3 (18-56)||(4703060-4703098)
chr3 (337-379)||(10941743-10941785)
chr3 (321-379)||(46942486-46942544)
chr3 (318-379)||(8110335-8110396)
chr3 (318-379)||(11085420-11085481)
chr3 (318-379)||(21020061-21020122)
chr3 (318-379)||(29704110-29704171)
chr3 (318-379)||(31433733-31433794)
chr3 (328-377)||(35579605-35579654)
chr3 (327-379)||(10772132-10772184)
chr3 (327-379)||(13905116-13905168)
chr3 (327-379)||(17269682-17269734)
chr3 (327-371)||(21088757-21088801)
chr3 (327-379)||(23773482-23773534)
chr3 (327-379)||(27711246-27711298)
chr3 (327-379)||(28859596-28859648)
chr3 (327-379)||(46012806-46012858)
chr3 (328-379)||(20088406-20088457)
chr3 (328-379)||(21816727-21816778)
chr3 (337-379)||(6718725-6718767)
chr3 (349-379)||(8546272-8546302)
chr3 (349-379)||(37283550-37283580)
chr3 (318-379)||(18380020-18380081)
chr3 (318-379)||(20615421-20615482)
chr3 (322-379)||(29956372-29956429)
chr3 (322-379)||(30005527-30005584)
chr3 (327-379)||(1745565-1745617)
chr3 (327-379)||(3461388-3461440)
chr3 (327-379)||(5565727-5565779)
[»] chr1 (59 HSPs)
chr1 (318-379)||(18894978-18895039)
chr1 (318-379)||(50845408-50845469)
chr1 (318-379)||(6459217-6459278)
chr1 (318-379)||(9110053-9110114)
chr1 (318-379)||(12720809-12720870)
chr1 (318-379)||(14760867-14760928)
chr1 (318-379)||(41752433-41752494)
chr1 (318-379)||(45839292-45839353)
chr1 (318-379)||(6412131-6412192)
chr1 (318-379)||(7830031-7830092)
chr1 (318-379)||(9464103-9464164)
chr1 (318-379)||(12161814-12161875)
chr1 (318-379)||(13523039-13523100)
chr1 (318-379)||(14486710-14486771)
chr1 (318-379)||(15243085-15243146)
chr1 (318-379)||(16913655-16913716)
chr1 (318-379)||(22158802-22158863)
chr1 (318-379)||(23457897-23457958)
chr1 (318-379)||(29549418-29549479)
chr1 (318-379)||(41063197-41063258)
chr1 (318-379)||(41071913-41071974)
chr1 (318-379)||(52183678-52183739)
chr1 (327-379)||(19865253-19865305)
chr1 (320-379)||(12174844-12174903)
chr1 (328-379)||(50092376-50092427)
chr1 (318-379)||(7181633-7181694)
chr1 (318-379)||(9259261-9259322)
chr1 (318-379)||(12370019-12370080)
chr1 (318-379)||(13102316-13102377)
chr1 (318-379)||(16258564-16258625)
chr1 (318-379)||(19081728-19081789)
chr1 (318-379)||(19129616-19129677)
chr1 (318-379)||(20408238-20408299)
chr1 (318-379)||(22603548-22603609)
chr1 (318-379)||(38531248-38531309)
chr1 (328-379)||(4340417-4340468)
chr1 (328-379)||(41120815-41120866)
chr1 (318-379)||(17661050-17661111)
chr1 (318-379)||(17734032-17734093)
chr1 (318-379)||(18890627-18890688)
chr1 (318-379)||(22789669-22789730)
chr1 (326-379)||(30673502-30673555)
chr1 (327-379)||(41358996-41359049)
chr1 (338-379)||(46339523-46339564)
chr1 (318-379)||(52621154-52621215)
chr1 (331-379)||(26825253-26825301)
chr1 (328-379)||(46786036-46786087)
chr1 (321-379)||(13195586-13195644)
chr1 (349-379)||(25788075-25788105)
chr1 (318-379)||(9985405-9985466)
chr1 (318-379)||(11917786-11917847)
chr1 (318-379)||(30928456-30928517)
chr1 (318-379)||(32046876-32046937)
chr1 (318-379)||(46865243-46865304)
chr1 (318-379)||(48522518-48522579)
chr1 (327-379)||(9882115-9882167)
chr1 (327-379)||(13308898-13308950)
chr1 (327-379)||(28229533-28229585)
chr1 (327-379)||(39748942-39748994)
[»] scaffold0717 (1 HSPs)
scaffold0717 (318-379)||(997-1058)
[»] scaffold0219 (1 HSPs)
scaffold0219 (318-379)||(19603-19664)
[»] scaffold0087 (1 HSPs)
scaffold0087 (318-379)||(37865-37926)
[»] scaffold0069 (1 HSPs)
scaffold0069 (318-379)||(10158-10219)
[»] scaffold0001 (3 HSPs)
scaffold0001 (318-379)||(8188-8249)
scaffold0001 (318-379)||(21920-21981)
scaffold0001 (318-379)||(84303-84364)
[»] scaffold0599 (1 HSPs)
scaffold0599 (318-379)||(7505-7566)
[»] scaffold0007 (3 HSPs)
scaffold0007 (318-379)||(202774-202835)
scaffold0007 (322-379)||(3746-3803)
scaffold0007 (318-379)||(276212-276273)
[»] scaffold0006 (2 HSPs)
scaffold0006 (320-379)||(121065-121124)
scaffold0006 (327-379)||(84752-84804)
[»] scaffold0603 (1 HSPs)
scaffold0603 (318-379)||(6057-6118)
[»] scaffold0576 (1 HSPs)
scaffold0576 (318-379)||(9307-9368)
[»] scaffold0161 (1 HSPs)
scaffold0161 (318-379)||(6795-6856)
[»] scaffold0076 (1 HSPs)
scaffold0076 (318-379)||(26483-26544)
[»] scaffold0009 (2 HSPs)
scaffold0009 (330-379)||(219648-219697)
scaffold0009 (350-379)||(182562-182591)
[»] scaffold0240 (1 HSPs)
scaffold0240 (328-379)||(15068-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (328-379)||(22221-22272)
[»] scaffold0184 (1 HSPs)
scaffold0184 (322-376)||(7460-7514)
[»] scaffold0502 (1 HSPs)
scaffold0502 (318-379)||(10892-10953)
[»] scaffold0108 (1 HSPs)
scaffold0108 (318-379)||(12653-12713)
[»] scaffold0024 (1 HSPs)
scaffold0024 (318-379)||(112328-112389)
[»] scaffold0023 (1 HSPs)
scaffold0023 (318-379)||(39781-39842)
[»] scaffold0019 (1 HSPs)
scaffold0019 (330-379)||(173456-173505)
[»] scaffold0128 (1 HSPs)
scaffold0128 (328-379)||(10741-10792)
[»] scaffold0035 (1 HSPs)
scaffold0035 (330-379)||(74795-74845)
[»] scaffold0062 (1 HSPs)
scaffold0062 (318-379)||(43917-43978)
[»] scaffold0002 (1 HSPs)
scaffold0002 (350-379)||(439995-440024)


Alignment Details
Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 31266350 - 31266411
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattt 31266411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 41637614 - 41637675
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 41637675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 29749542 - 29749481
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattt 29749481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 30783334 - 30783395
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 30783395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27523007 - 27523068
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 27523068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8430292 - 8430353
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 8430353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18551392 - 18551331
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattt 18551331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18916539 - 18916478
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  18916539 ttagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattt 18916478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 23388517 - 23388456
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 23388456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 27327616 - 27327673
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  27327616 tgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattt 27327673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 28262360 - 28262421
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 28262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 28841481 - 28841420
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattt 28841420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 32185828 - 32185889
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 32185889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 32300447 - 32300508
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 32300508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1141532 - 1141593
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||| ||||||||||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattt 1141593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 13788194 - 13788133
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||||||||    |||||||||||||||| |||||||||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattt 13788133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 14757248 - 14757199
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 14757199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 15636874 - 15636813
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||| |||||||||||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattt 15636813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 21293850 - 21293789
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||| ||||||||||||||||||||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattt 21293789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 26687830 - 26687769
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||||| || |||||||| ||||||| |||||||||||||||||||||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattt 26687769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 32008948 - 32009009
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||  ||||||||||   ||||||||||||||||||||||||||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattt 32009009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 41736168 - 41736229
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||||||||    |||||||||||||||| |||||||||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattt 41736229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 28319713 - 28319657
Alignment:
Q  323 gaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 28319657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 44722930 - 44722989
Alignment:
Q  320 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||| ||| ||||| | |||||||||||||||||||||||||||||||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattt 44722989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8763630 - 8763691
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||  ||||||||| || |||||||| ||||||| ||||||||||||||| |||||||    
T  8763630 ttagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattt 8763691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 20065213 - 20065152
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||| |||||  |||||||||||||||||| ||||||||||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattt 20065152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22140503 - 22140442
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||  ||||||  |||||||||||||||||||||||||||||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattt 22140442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 29998698 - 29998637
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| || |||||||  ||||||| |||||||||||||||||||||||    
T  29998698 ttagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattt 29998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 36550844 - 36550893
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||||||||| ||||||| |||||||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattt 36550893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37724131 - 37724070
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||||| ||||||||||  |||||||||| ||||| ||||||||||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattt 37724070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37802517 - 37802456
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||  |||||||||||||||||||||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattt 37802456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 40018798 - 40018859
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| |||||||||| ||||||||||| |||||| |||||||||||  ||||| |||||    
T  40018798 ttagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattt 40018859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 13613219 - 13613171
Alignment:
Q  331 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 13613171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 43408641 - 43408589
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 43408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 22192188 - 22192235
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaatt 365  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||    
T  22192188 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 35697458 - 35697512
Alignment:
Q  324 aggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||| | | |||||| ||||| |||||||||||||||||||||||||    
T  35697458 aggaaaatttagc-atgaaaaacatgaaattcctctctaattccgtcactaaattt 35697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 24117368 - 24117315
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtca 371  Q
    |||||||||||||||||| || | |||||| ||||| | |||||||||||||||    
T  24117368 ttagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtca 24117315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 44366136 - 44366087
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattcc 367  Q
    ||||||||| || ||||| |||| |||||| |||||||||||||||||||    
T  44366136 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 44366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 27058455 - 27058407
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattc 366  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||    
T  27058455 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 74680 - 74619
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 74619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 58582 - 58643
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 58643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 17104004 - 17103943
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 17103943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 17824755 - 17824694
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 17824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 37992097 - 37992158
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 37992158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 24576163 - 24576102
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  24576163 ttagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattt 24576102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 3823131 - 3823192
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 3823192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 6816522 - 6816461
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattt 6816461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8555443 - 8555382
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||||  ||||| ||||||||||||||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattt 8555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17810296 - 17810357
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattt 17810357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18010199 - 18010138
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  18010199 ttagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattt 18010138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27910903 - 27910842
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  27910903 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattt 27910842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27957322 - 27957261
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  27957322 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattt 27957261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 29350921 - 29350982
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattt 29350982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 29345072 - 29345130
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| ||||||||||  |||||||||| ||||||||||||||||||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattt 29345130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 4330976 - 4331037
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||| |||||||||||||||||||||||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattt 4331037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 22939323 - 22939372
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 22939372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 24193335 - 24193274
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||| | ||||||||||| |||||| ||||||||||||||||||||||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattt 24193274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 27869248 - 27869297
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 27869297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 33652565 - 33652626
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattt 33652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 43431698 - 43431637
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||| |||||||||||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattt 43431637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 13061061 - 13061009
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  13061061 aaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattt 13061009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 26399137 - 26399085
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 26399085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 32247916 - 32247968
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 32247968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 5670298 - 5670247
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 5670247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 11938753 - 11938804
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 11938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 19256220 - 19256271
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 19256271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 24636660 - 24636711
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 24636711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 4647894 - 4647833
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||| | |||||||||   |||||||||||||||||||||||||||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattt 4647833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 5879202 - 5879263
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||   |||| |||||||||||||||||||||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattt 5879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 6817052 - 6817113
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||    ||||| ||||||||||||||||||||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattt 6817113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9915179 - 9915118
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||| | ||||||||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattt 9915118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19240865 - 19240926
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||   |||| |||||||||||||||||||||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 19240926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19314049 - 19314110
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||   |||| |||||||||||||||||||||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 19314110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 19493786 - 19493733
Alignment:
Q  327 aaaatttagcgagggaaaaca-agaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||||||||||    
T  19493786 aaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattt 19493733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 21350476 - 21350537
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||   |||||| |||||||||||||||||||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattt 21350537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 40289559 - 40289499
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||| ||||||||||||||||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattt 40289499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 10917834 - 10917886
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||| |||||| | |||||||||||||||||||||||||||||    
T  10917834 aaaaattagtgaggaaaaacatgcaatccctctctaattccgtcactaaattt 10917886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 19488191 - 19488139
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||| | ||||| |||||||||||||||||||||||||    
T  19488191 aaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattt 19488139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 31399638 - 31399586
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattt 31399586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 18844683 - 18844636
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaatt 365  Q
    ||||||||| |||||||| || |||||||| |||||||||||||||||    
T  18844683 ttagtgagggaaatttagtgaaggaaaacatgaaatccctctctaatt 18844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 33413095 - 33413048
Alignment:
Q  332 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 33413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 32961657 - 32961715
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa 376  Q
    ||||||||| |||||||| |||||||||    |||| ||||||||||||||||||||||    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaa 32961715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 8824855 - 8824884
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  8824855 aaatccctctctaattccgtcactaaattt 8824884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 15251601 - 15251661
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||| ||||  ||||||||||  ||||||| |||||||||| ||||||||||||    
T  15251601 ttagtgaggaaa-tttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattt 15251661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 30687966 - 30687995
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  30687966 aaatccctctctaattccgtcactaaattt 30687995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 31344311 - 31344250
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| |||||||||   ||||| ||||||||||||||||| |||||||    
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattt 31344250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 25273457 - 25273405
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  25273457 aaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattt 25273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 36636506 - 36636567
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 36636567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 40847574 - 40847513
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 40847513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 816330 - 816269
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||    
T  816330 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattt 816269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1907355 - 1907416
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  1907355 ttagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattt 1907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 2457670 - 2457731
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattt 2457731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 15014544 - 15014483
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 15014483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 24605838 - 24605899
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattt 24605899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27806018 - 27806079
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 27806079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 28800878 - 28800939
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 28800939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 39979763 - 39979702
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattt 39979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 47523789 - 47523728
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 47523728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 10050975 - 10050914
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 10050914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 11036507 - 11036568
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 11036568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 20174020 - 20174081
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 20174081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 20429465 - 20429526
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 20429526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 20924097 - 20924036
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  20924097 ttagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattt 20924036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22486394 - 22486455
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| || |||||||  |||||||||||||||||||||||||||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattt 22486455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22501594 - 22501655
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||||||||||| |||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattt 22501655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 23232039 - 23232100
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattt 23232100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 23577328 - 23577267
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  ||||||||| |||||||||||||||||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattt 23577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 31425650 - 31425589
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 31425589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37135424 - 37135363
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 37135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 42926559 - 42926498
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattt 42926498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 38057636 - 38057690
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa 376  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  38057636 tgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaa 38057690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 7733451 - 7733390
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| |||| |||||| |||||||||||||||||||||| ||||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattt 7733390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9698677 - 9698616
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 9698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 15969796 - 15969845
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattt 15969845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 21917473 - 21917412
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 21917412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 23750875 - 23750814
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||    ||||||||||||||||||||||||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattt 23750814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 31042251 - 31042312
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  31042251 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattt 31042312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 45664768 - 45664829
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||| ||| ||||||||||   ||||||||||||||||||||||||||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 45664829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 26577274 - 26577326
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  26577274 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattt 26577326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 33427704 - 33427751
Alignment:
Q  332 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattt 33427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 32267350 - 32267408
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattt 32267408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 1842898 - 1842955
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||||| ||||||||||   ||||||||| ||||||||||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattt 1842955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11890286 - 11890225
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||| | || ||||||| |||| | |||||||||||||    
T  11890286 ttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattt 11890225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 18217829 - 18217890
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||   |||||||||||||||| |||||||||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattt 18217890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 24140450 - 24140511
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||||  |||||| |||| |||||||||| |||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattt 24140511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 36993820 - 36993881
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| |||| |||||| |||||| || |||||||||||||||||||||    
T  36993820 ttagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattt 36993881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 1824330 - 1824278
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||| | ||||| |||||||||||||||||||||||||    
T  1824330 aaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattt 1824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 3904608 - 3904556
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 3904556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 4514774 - 4514826
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  4514774 aaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattt 4514826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 11852021 - 11852069
Alignment:
Q  331 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattt 11852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 21623031 - 21623082
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||||||||||||||||| |||||||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattt 21623082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 2650948 - 2650906
Alignment:
Q  337 gagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||   ||||||||||||||||||||||||||||||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattt 2650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 6849350 - 6849289
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||| |||| |||||   ||||| ||||||||||||||||||||||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattt 6849289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 25777247 - 25777190
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||||| ||||||||||  |||||| |||||||||| | |||||||||||    
T  25777247 tgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattt 25777190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 48933136 - 48933197
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||  |||||  ||||| |||||||||||||||||||||||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattt 48933197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 2093492 - 2093440
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  2093492 aaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaattt 2093440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 3872317 - 3872265
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  3872317 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattt 3872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 377
Target Start/End: Complemental strand, 5235448 - 5235420
Alignment:
Q  349 gaaatccctctctaattccgtcactaaat 377  Q
    |||||||||||||||||||||||||||||    
T  5235448 gaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 11530225 - 11530286
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattt 11530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 14886561 - 14886622
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattt 14886622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 2992615 - 2992676
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 2992676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 9892963 - 9893024
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 9893024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12845003 - 12845064
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  12845003 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattt 12845064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12951708 - 12951769
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattt 12951769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18033664 - 18033603
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattt 18033603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22083838 - 22083899
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattt 22083899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27796973 - 27796912
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 27796912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 6598464 - 6598525
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattt 6598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12160985 - 12160924
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||| |||||| |||||||||||  |||||||||||||||| |||||||||||||    
T  12160985 ttagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaattt 12160924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12680323 - 12680262
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||| |||||||    
T  12680323 ttagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattt 12680262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 20182145 - 20182206
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 20182206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 21140939 - 21141000
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 21141000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 21990313 - 21990256
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 375  Q
    |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaa 21990256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22153846 - 22153785
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 22153785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22579488 - 22579427
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 22579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 25398002 - 25398063
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 25398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 26224440 - 26224489
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 26224489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 26939599 - 26939648
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 26939648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27705422 - 27705483
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 27705483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 28364911 - 28364972
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 28364972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 14872128 - 14872180
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 14872180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 495766 - 495705
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattt 495705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 9885243 - 9885304
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||    
T  9885243 ttagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattt 9885304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 11049878 - 11049829
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 11049829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12200694 - 12200755
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattt 12200755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 15364597 - 15364536
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattt 15364536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 23281786 - 23281847
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  23281786 ttagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 23281847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 24661148 - 24661087
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||| |||||||||||||||| |||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattt 24661087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 11077658 - 11077710
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  11077658 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattt 11077710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 12205321 - 12205263
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||   ||||||||||  |||||||||| ||||||||||||||||||||    
T  12205321 gtgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcactaaattt 12205263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 1939381 - 1939320
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | ||| || ||| ||||||| ||||||||||||||||||||||| |||||||    
T  1939381 ttagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattt 1939320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 5270392 - 5270453
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| |||||||||   ||||| |||||||||||||||||||||||||    
T  5270392 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattt 5270453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11431779 - 11431718
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  11431779 ttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattt 11431718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12351725 - 12351664
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||  |||||||||||||||| |||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattt 12351664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 14036620 - 14036681
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||| |||| |||||||    
T  14036620 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattt 14036681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 18048788 - 18048849
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||| |||||||||| |||||||  |||||||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattt 18048849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 21691635 - 21691574
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| |||| |||||  ||||||||||||||||| |||||||||||||    
T  21691635 ttagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattt 21691574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 33250835 - 33250786
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||| ||||||||||||| |||||||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattt 33250786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 5192319 - 5192267
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 5192267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 6605626 - 6605574
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||    
T  6605626 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattt 6605574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 12157514 - 12157454
Alignment:
Q  319 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||| |||  |||| | ||||||  |||||||||||||||||||||||    
T  12157514 tagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattt 12157454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 15448395 - 15448446
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||||||||||||||||||||| |||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattt 15448446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 343702 - 343644
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa 376  Q
    ||||||||| |||||||  ||||||||||   ||||||||||||||||| |||||||||    
T  343702 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaa 343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 6978300 - 6978338
Alignment:
Q  341 gaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattt 6978338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 379
Target Start/End: Original strand, 15509187 - 15509217
Alignment:
Q  349 gaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||||||||||||||||    
T  15509187 gaaatccctctctaattccgtcactaaattt 15509217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 2669309 - 2669370
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| | || |||||   |||| |||||||||||||||||||||||||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattt 2669370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 9060091 - 9060151
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | ||||||||||||||||| || |||||  ||||||||||| ||||||||||||    
T  9060091 ttagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattt 9060151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 16250941 - 16250880
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||| | ||||||||||  |||||| ||||||||||| ||||||||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattt 16250880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 17919568 - 17919597
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  17919568 aaatccctctctaattccgtcactaaattt 17919597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 18492389 - 18492430
Alignment:
Q  338 agggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattt 18492430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 22055751 - 22055702
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattcc 367  Q
    ||||||||| || ||||| |||| |||||| |||||||||||||||||||    
T  22055751 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 22055702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 5360418 - 5360470
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||| |||||||||||   ||||| ||||||||||||||||||||||||    
T  5360418 aaaaattaacgagggaaaacgtaaaatctctctctaattccgtcactaaattt 5360470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 11350191 - 11350243
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||||||  ||||| ||||||||||| ||||||||||||    
T  11350191 aaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattt 11350243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 12499225 - 12499277
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||    
T  12499225 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattt 12499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 12506554 - 12506606
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||    
T  12506554 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattt 12506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 12509676 - 12509624
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||    
T  12509676 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattt 12509624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 13145011 - 13145063
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||| |||| |||||||||||||||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattt 13145063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 20692941 - 20692889
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||||| |||||||||||||    
T  20692941 aaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattt 20692889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 33547555 - 33547607
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| ||||||||| |||||||  ||||||||||||    
T  33547555 aaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattt 33547607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27428151 - 27428090
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  27428151 ttagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattt 27428090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 33818700 - 33818639
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 33818639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 618294 - 618355
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 618355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 16121978 - 16121917
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 16121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 23423895 - 23423834
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 23423834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 7888797 - 7888858
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattt 7888858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 10420391 - 10420330
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  10420391 ttagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattt 10420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12328365 - 12328304
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattt 12328304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 17039770 - 17039709
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 17039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17079405 - 17079466
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattt 17079466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 20959508 - 20959569
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattt 20959569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 23408980 - 23409041
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 23409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 23975635 - 23975696
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 23975696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 33816897 - 33816836
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| ||||| ||| |||||||||||||||||||||    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattt 33816836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 25397918 - 25397866
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 25397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 5982649 - 5982703
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa 376  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||||||||||    
T  5982649 tgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaa 5982703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 2472841 - 2472792
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattt 2472792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8108999 - 8108938
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||| | ||||||||||| ||||| |||||||||||||||||||||||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattt 8108938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8886990 - 8886929
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||    ||||||||||||||||||||||||||||||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattt 8886929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11927925 - 11927864
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| || |||||||  |||||||||||||||||||||||||||||||    
T  11927925 ttagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattt 11927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12045727 - 12045788
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattt 12045788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 13620266 - 13620205
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| ||||| ||||||    
T  13620266 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattt 13620205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 13974217 - 13974156
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||| |||||||||||||||||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaattt 13974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 15060973 - 15061034
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||| |||||  |||||||||||||||||||||||||||||||    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattt 15061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17986729 - 17986790
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||| | |||||||||||||||||||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattt 17986790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 25673367 - 25673306
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||  ||||||| ||||||||||||||||||||||||| |||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattt 25673306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 29727985 - 29727928
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 375  Q
    ||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  29727985 ttagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 35620470 - 35620421
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattt 35620421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 36196394 - 36196455
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||||||||   |||||||||||||||||||||||||||||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattt 36196455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 746998 - 746946
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 746946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 3080835 - 3080778
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 375  Q
    ||||||| |||||||||| ||||||||||| |||||||||||| |||| | |||||||    
T  3080835 ttagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaa 3080778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 36716339 - 36716278
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||| | ||||||||||  ||||||| ||||||||||| ||| |||||||    
T  36716339 ttagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattt 36716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 36832029 - 36831968
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||    |||||||||||||||||| |||||||||||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattt 36831968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 10494746 - 10494798
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 10494798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 17772098 - 17772046
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||||||  ||||| ||||||||||||||||||||||||    
T  17772098 aaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattt 17772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 40484053 - 40484105
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 40484105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 22649458 - 22649407
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||| |||||||    
T  22649458 aaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaattt 22649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 24138970 - 24138919
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattt 24138919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 26708714 - 26708663
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 26708663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 26978448 - 26978397
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 26978397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 7003867 - 7003808
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||||  |||||||||||||||||||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattt 7003808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 17036540 - 17036490
Alignment:
Q  329 aatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattt 17036490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 25652719 - 25652661
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| |||||||||    ||||||||||||||||||||||| ||||||    
T  25652719 gtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattt 25652661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 31853208 - 31853166
Alignment:
Q  337 gagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||||| |||||| ||||||||||||||||||||||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattt 31853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Complemental strand, 16631981 - 16631952
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  16631981 aaatccctctctaattccgtcactaaattt 16631952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Complemental strand, 28265582 - 28265553
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  28265582 aaatccctctctaattccgtcactaaattt 28265553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 32726865 - 32726804
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| |||||||||   |||||  ||||||||||||||||||||||||    
T  32726865 ttagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattt 32726804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 4125318 - 4125266
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||||   |||||| ||||||||||||||||||||||||    
T  4125318 aaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattt 4125266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 16464687 - 16464735
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 375  Q
    |||| |||| ||||||||||| ||||| |||||||| ||||||||||||    
T  16464687 aaaaattagtgagggaaaacatgaaattcctctctatttccgtcactaa 16464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 36597470 - 36597418
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||||||  |||| |||||||||||| ||||||||||||    
T  36597470 aaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattt 36597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 38837801 - 38837749
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||||||| |||||||||||    
T  38837801 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattt 38837749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 5399607 - 5399668
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 5399668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 25147719 - 25147780
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 25147780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1638445 - 1638506
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattt 1638506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 2275817 - 2275756
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 2275756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22156740 - 22156679
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 22156679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 33914057 - 33914118
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattt 33914118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37378762 - 37378701
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattt 37378701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 37761977 - 37761920
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  37761977 tgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 37761920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 5473847 - 5473908
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||   |||||||||| |||||||||||||||||||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattt 5473908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8878881 - 8878942
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  8878881 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattt 8878942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 18051837 - 18051898
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 18051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18744209 - 18744148
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 18744148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19839177 - 19839238
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  19839177 ttagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 19839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22128451 - 22128390
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattt 22128390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27040164 - 27040103
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 27040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 32175876 - 32175815
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 32175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 46286368 - 46286307
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 46286307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 55309352 - 55309291
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 55309291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12071960 - 12072021
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| || ||||||||  ||||||||||||||||||||||||||||||    
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattt 12072021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 13565054 - 13564993
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 13564993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22168266 - 22168327
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattt 22168327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 30269127 - 30269066
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||||||||||||    ||||| ||||||||||||||||||||||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattt 30269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 30283062 - 30283123
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||||||||||||    ||||| ||||||||||||||||||||||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattt 30283123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 36689675 - 36689736
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||| | ||||||||  |||||||||||||||||||||||||||||||    
T  36689675 ttagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattt 36689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 45532718 - 45532657
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||| |||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattt 45532657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 12105990 - 12106042
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  12105990 aaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaattt 12106042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 29625332 - 29625384
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 29625384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 4586887 - 4586836
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 4586836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 13028945 - 13028894
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 13028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 9059072 - 9059030
Alignment:
Q  337 gagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  9059072 gagggaaaacatgaaatccctctctaattccgtcattaaattt 9059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 9913259 - 9913317
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  9913259 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattt 9913317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 38223511 - 38223569
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| ||||||||||   ||||||||||||||||| ||||||||||||    
T  38223511 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattt 38223569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 19680559 - 19680502
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||| | ||||||||||   ||||||||||||||||||||||||||||||    
T  19680559 tgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 19680502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 14944753 - 14944805
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 14944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 38619854 - 38619906
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 38619906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 25026565 - 25026616
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattt 25026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 30420172 - 30420113
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaat 377  Q
    |||||||| ||||||||| | | ||||||| ||||| ||||||||||| |||||||||||    
T  30420172 ttagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaat 30420113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 45091282 - 45091333
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattt 45091333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 16915367 - 16915428
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| ||||||||| | |||||| ||||||||||  ||||||||||||    
T  16915367 ttagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattt 16915428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 18714932 - 18714961
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  18714932 aaatccctctctaattccgtcactaaattt 18714961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 30508017 - 30508046
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  30508017 aaatccctctctaattccgtcactaaattt 30508046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 4606959 - 4606907
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||||||||   |||||| ||||||||||||||||||||||||    
T  4606959 aaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattt 4606907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 371
Target Start/End: Complemental strand, 9239411 - 9239367
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtca 371  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtca 9239367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 9670609 - 9670557
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  9670609 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 9670557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 38645757 - 38645809
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||    
T  38645757 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattt 38645809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 49915447 - 49915508
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 49915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 19610335 - 19610395
Alignment:
Q  319 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 19610395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 23217344 - 23217286
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  23217344 gtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattt 23217286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 275
Target Start/End: Original strand, 4704074 - 4704215
Alignment:
Q  134 aattggagggaaagtgaacaaaatcttttgaaactcacagatactaaccatattcacctacttatgctctaaacaaacaagttttttatataagtggaag 233  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||| | |  | |||||||||| |||| ||||| |||||||||| | | ||||||| ||     
T  4704074 aatttgagggaaagggaacacaatcttttcaaactcacagataccatctctcttcacctactcatgcactaaataaacaagtttataacataagtgtaaa 4704173  T
Q  234 agtatatattgaataatgaagcttttgaattaataagtgatg 275  Q
    ||||||| |||||  ||||||| ||| |||||| || |||||    
T  4704174 agtatatgttgaaccatgaagccttttaattaagaattgatg 4704215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 16299857 - 16299918
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattt 16299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18104669 - 18104608
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattt 18104608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 25882566 - 25882627
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 25882627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 29215988 - 29216049
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattt 29216049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 30219334 - 30219395
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattt 30219395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1628211 - 1628272
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||    
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattt 1628272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 4393489 - 4393428
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 4393428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8428167 - 8428228
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 8428228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 9652574 - 9652635
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 9652635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11007822 - 11007761
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 11007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 11219134 - 11219195
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||| | ||||||||||  ||||||||||||||||||||||| |||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattt 11219195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 11915754 - 11915815
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 11915815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 17582440 - 17582379
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 17582379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17762638 - 17762699
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattt 17762699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18091686 - 18091625
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattt 18091625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 18539800 - 18539861
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 18539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19063958 - 19064019
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattt 19064019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 23255534 - 23255485
Alignment:
Q  241 attgaataatgaagcttttgaattaataagtgatgtgatcaacatcataa 290  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23255534 attgattaatgaagcttttgaattaagaagtgatgtgatcaacatcataa 23255485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 26830581 - 26830520
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||||||||| ||||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattt 26830520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27449084 - 27449145
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 27449145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 28389969 - 28390030
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattt 28390030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 36543745 - 36543806
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||| |||||||||||||    
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattt 36543806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 26098818 - 26098870
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 26098870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 31250087 - 31250145
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattt 31250145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 5260933 - 5260994
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||| ||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 5260994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 7623670 - 7623609
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||||||||   |||||||||||||||||||||||||||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattt 7623609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8543465 - 8543526
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||| |||||||    
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattt 8543526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19223445 - 19223506
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| | ||||||||   ||||||||||||||||||||||||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattt 19223506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 19270003 - 19269942
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||||||| |||||||||||||||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattt 19269942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19545506 - 19545567
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||   ||||||||||||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattt 19545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 26390773 - 26390712
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||| | |||||| |||| |||||||||||||||||||||||||||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattt 26390712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 27182785 - 27182736
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaat 377  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  27182785 aaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaat 27182736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27212920 - 27212859
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||| |||||  ||||||||||| |||||||||||||||||||    
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattt 27212859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27968911 - 27968972
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| |||| |||||||    
T  27968911 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattt 27968972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 1311097 - 1311037
Alignment:
Q  319 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| |||||||| || |||||||   ||||||||||||||||||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattt 1311037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 5744421 - 5744473
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  5744421 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 5744473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 5781380 - 5781432
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  5781380 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 5781432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 13921330 - 13921382
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 13921382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 15064122 - 15064070
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  15064122 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattt 15064070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 36564578 - 36564518
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatt 378  Q
    ||||||||| |||||| | |||||||| || ||||||||||||||||| ||||||||||||    
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaatt 36564518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 50665766 - 50665714
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  50665766 aaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattt 50665714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 11837339 - 11837292
Alignment:
Q  332 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattt 11837292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 29236050 - 29236101
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 29236101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 48404866 - 48404917
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 48404917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 4703060 - 4703098
Alignment:
Q  18 tgaacatttcagcacagtatagctaacttgtctcctact 56  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4703060 tgaacatttcagcacagtatagctaacttctctcctact 4703098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 10941785 - 10941743
Alignment:
Q  337 gagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattt 10941743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 46942486 - 46942544
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  46942486 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattt 46942544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8110335 - 8110396
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||| ||||||||||||||||| |||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattt 8110396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11085481 - 11085420
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  |||||||| ||||||||    |||||||||||||||||||||||||||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattt 11085420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 21020061 - 21020122
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||  | ||||| |||||||||||  |||||| |||||||||||||||||||||||    
T  21020061 ttagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattt 21020122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 29704171 - 29704110
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||| ||||||  ||||||||||| |||||||||||||||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattt 29704110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 31433733 - 31433794
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || |||||  |||||||||  ||||| |||||||||||||||||||||||||    
T  31433733 ttagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattt 31433794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaat 377  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 10772184 - 10772132
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||| | ||||||||||||||||| ||||| |||||||    
T  10772184 aaaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattt 10772132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 13905168 - 13905116
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 17269734 - 17269682
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||| |||| | |||||||||||||||||||||||||||||||    
T  17269734 aaaaattagtgaggaaaaatatgaaatccctctctaattccgtcactaaattt 17269682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 21088757 - 21088801
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtca 371  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtca 21088801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 23773482 - 23773534
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 23773534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 27711298 - 27711246
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| ||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  27711298 aaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattt 27711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 28859596 - 28859648
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||| |||||   ||||||||||||||||||||||||||||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattt 28859648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 46012858 - 46012806
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  46012858 aaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattt 46012806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 20088406 - 20088457
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| |||| |||||| ||||||| ||||||||||| |||||||||||    
T  20088406 aaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattt 20088457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 21816727 - 21816778
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 21816778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 379
Target Start/End: Original strand, 6718725 - 6718767
Alignment:
Q  337 gagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||  ||||||||| |||||||||||||||||||||    
T  6718725 gagggaaaacgtgaaatccctttctaattccgtcactaaattt 6718767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 379
Target Start/End: Original strand, 8546272 - 8546302
Alignment:
Q  349 gaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||||||||||||||||    
T  8546272 gaaatccctctctaattccgtcactaaattt 8546302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 379
Target Start/End: Original strand, 37283550 - 37283580
Alignment:
Q  349 gaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||||||||||||||||    
T  37283550 gaaatccctctctaattccgtcactaaattt 37283580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 18380020 - 18380081
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||  |||||||||    |||||||||| |||||||||||||||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattt 18380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 20615482 - 20615421
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| || |||||||  ||||| |||||||||||| |||| |||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattt 20615421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 29956372 - 29956429
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||| | |||||||||   ||||||||| |||||||||||||||||||||    
T  29956372 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattt 29956429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 30005527 - 30005584
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||| | |||||||||   ||||||||| |||||||||||||||||||||    
T  30005527 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattt 30005584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 1745617 - 1745565
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  1745617 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattt 1745565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 3461440 - 3461388
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||||||||||| |||||||    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattt 3461388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 5565727 - 5565779
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||  |||||||||||||||||  ||||||||||||    
T  5565727 aaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattt 5565779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18895039 - 18894978
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattt 18894978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 50845469 - 50845408
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  50845469 ttagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 50845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 6459217 - 6459278
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 6459278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9110114 - 9110053
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 9110053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12720809 - 12720870
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 12720870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 14760867 - 14760928
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattt 14760928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 41752433 - 41752494
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 41752494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 45839292 - 45839353
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 45839353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 6412192 - 6412131
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattt 6412131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 7830031 - 7830092
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||||||| |||||| |||||||||||||    
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattt 7830092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 9464103 - 9464164
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 9464164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12161814 - 12161875
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 12161875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 13523100 - 13523039
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  13523100 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattt 13523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 14486771 - 14486710
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||| |||||    
T  14486771 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattt 14486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 15243085 - 15243146
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  ||||||||| |||||||||||||||||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattt 15243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 16913716 - 16913655
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||| | |||||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattt 16913655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22158802 - 22158863
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 22158863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 23457897 - 23457958
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 23457958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 29549418 - 29549479
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 29549479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 41063197 - 41063258
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||| ||||||  ||||| ||||||||||||||||||||||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattt 41063258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 41071974 - 41071913
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 41071913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 52183678 - 52183739
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattt 52183739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 19865253 - 19865305
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 19865305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 12174903 - 12174844
Alignment:
Q  320 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| | |||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattt 12174844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 50092427 - 50092376
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  50092427 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattt 50092376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 7181694 - 7181633
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| |  |||||||||  |||||||||||||||||||||||||||||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattt 7181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9259322 - 9259261
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  |||||| ||||||||||||||||||||||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattt 9259261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12370080 - 12370019
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||||  ||||||||||  |||||| |||||||||||||||||||||||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattt 12370019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 13102316 - 13102377
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| |||||||||||  ||||| || |||||||||||||||||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattt 13102377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 16258625 - 16258564
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||| |||||  |||| |||||| |||||||||||||||||||    
T  16258625 ttagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattt 16258564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19081728 - 19081789
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  19081728 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattt 19081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19129616 - 19129677
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  19129616 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattt 19129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 20408299 - 20408238
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||| |||||||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattt 20408238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 22603548 - 22603609
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattt 22603609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 38531309 - 38531248
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||| |||||||||||| |||||||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattt 38531248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 4340417 - 4340468
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 4340468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 41120866 - 41120815
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 41120815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17661050 - 17661111
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||||| ||||||||||||| |||||||||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattt 17661111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 17734093 - 17734032
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||| |||||| ||| |||||||| ||| |||||||    
T  17734093 ttagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaattt 17734032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18890688 - 18890627
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||| ||||||  ||||||||||||||||||||| |||||||||    
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattt 18890627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 22789730 - 22789669
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||  |||||| || |||||||| ||||||||||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattt 22789669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 30673502 - 30673555
Alignment:
Q  326 gaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||| ||||||||||| ||||||||||||||||||  | |||||||||    
T  30673502 gaaaatttagtgagggaaaacatgaaatccctctctaattctattactaaattt 30673555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 41358996 - 41359049
Alignment:
Q  327 aaaatttagcgagggaaaaca-agaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||||||||||    
T  41358996 aaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattt 41359049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 46339564 - 46339523
Alignment:
Q  338 agggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattt 46339523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 52621154 - 52621215
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| |||| |||||| ||||| | || |||||||| |||||||||||    
T  52621154 ttagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattt 52621215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 26825253 - 26825301
Alignment:
Q  331 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| ||||||||||  ||||| |||||||||||||||||||||||||    
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattt 26825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 46786087 - 46786036
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||||||||||||||||||||| |||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattt 46786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 13195586 - 13195644
Alignment:
Q  321 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||| |||||||||    ||||||||||||||||| ||||||||||||    
T  13195586 gtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattt 13195644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 379
Target Start/End: Complemental strand, 25788105 - 25788075
Alignment:
Q  349 gaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattt 25788075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9985466 - 9985405
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||| |||||   |||||||||||||||||||||| |||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattt 9985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 11917786 - 11917847
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||  || ||||| ||||||||||  ||| ||||| |||||||||||||||||||||    
T  11917786 ttagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcactaaattt 11917847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 30928517 - 30928456
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||  ||| ||||||| |||||  |||||||||||  |||||||||||    
T  30928517 ttagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattt 30928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 32046876 - 32046937
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||| ||| ||||||||||   ||||| ||||||||||||| ||||||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattt 32046937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 46865243 - 46865304
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||| || |||||| |||  ||||||||||||||||||| | |||||||||    
T  46865243 ttagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattt 46865304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 48522518 - 48522579
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | || ||| ||||||||||| ||||| |||||  ||||||||||||||||||    
T  48522518 ttagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattt 48522579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 9882167 - 9882115
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||| ||||||  |||| |||||||||||||||||||||||||    
T  9882167 aaaaattagtgaggaaaaacattaaattcctctctaattccgtcactaaattt 9882115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 13308950 - 13308898
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| |||| |||||| ||||||||||||||||| | |||||||||||    
T  13308950 aaaaattagtgaggaaaaacatgaaatccctctctaatttcatcactaaattt 13308898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 28229585 - 28229533
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||||||| |||||||||||    
T  28229585 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattt 28229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 39748942 - 39748994
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| || |||||||| |||||||| ||| |||| |||||||||||||    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattt 39748994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 1058 - 997
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19603 - 19664
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 19664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37926 - 37865
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattt 37865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 10158 - 10219
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattt 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8249 - 8188
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 21981 - 21920
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattt 21920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 84303 - 84364
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | |||||||||   |||||||||||||||||||||||||||||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattt 84364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 7505 - 7566
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 7566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 202774 - 202835
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 202835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 3746 - 3803
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 3803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 276273 - 276212
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||| ||||||  |||||||||||||||||||||||||||||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattt 276212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 121124 - 121065
Alignment:
Q  320 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||| || ||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattt 121065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 84804 - 84752
Alignment:
Q  327 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||| |||| ||||||||||   |||||||||||||||||| |||||||||||    
T  84804 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattt 84752  T

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Target: scaffold0603 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 6118 - 6057
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||| |||||||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattt 6057  T

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Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9368 - 9307
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattt 9307  T

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Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 6795 - 6856
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||| ||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||    
T  6795 ttagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattt 6856  T

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Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 26483 - 26544
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| | |||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 26544  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 219648 - 219697
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattt 219697  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 182562 - 182591
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  182562 aaatccctctctaattccgtcactaaattt 182591  T

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Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 15119 - 15068
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 15068  T

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Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 22221 - 22272
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattt 22272  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 7460 - 7514
Alignment:
Q  322 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa 376  Q
    ||||| |||||||| ||||||||||  |||||||||||||||||| |||||||||    
T  7460 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaa 7514  T

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Target: scaffold0502 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 10892 - 10953
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||||  |||| |||||| ||||| |||||||||||| ||||||||||||    
T  10892 ttagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattt 10953  T

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Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 12653 - 12713
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| |||||| | ||||||||||  ||| |||||||||||||||||||||||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattt 12713  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 112328 - 112389
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||| || |||| |||||   |||||||||||||||||||||| |||||||    
T  112328 ttagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattt 112389  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 39842 - 39781
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    ||||||||| ||||||   ||||||||||  |||||| ||||||||||||||||||||||||    
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattt 39781  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 173456 - 173505
Alignment:
Q  330 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||||||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattt 173505  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 10792 - 10741
Alignment:
Q  328 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||| ||||||||||   |||| |||||||||||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattt 10741  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 74845 - 74795
Alignment:
Q  330 atttagcgagggaaaa-caagaaatccctctctaattccgtcactaaattt 379  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattt 74795  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 43917 - 43978
Alignment:
Q  318 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 379  Q
    |||||||||||||||||| ||||||||||   |||| | ||||||||||||| | |||||||    
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattt 43978  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 439995 - 440024
Alignment:
Q  350 aaatccctctctaattccgtcactaaattt 379  Q
    ||||||||||||||||||||||||||||||    
T  439995 aaatccctctctaattccgtcactaaattt 440024  T

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