View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6887_high_5 (Length: 269)
Name: NF6887_high_5
Description: NF6887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6887_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11744365 - 11744616
Alignment:
| Q |
1 |
taattttaataggagagtatttttcaaaatttccacacgagtatcacaacttgtaatcaccgtgcttccataagtgggtgaaaagatgaatgagtgcaat |
100 |
Q |
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| T |
11744365 |
taattttaataggagagtattttccaaaatttccacacgagtatcacaacttgtaatcaccgtgcttccataagtgggtgaaaagatgaatgagtgcaat |
11744464 |
T |
|
| Q |
101 |
taaaaataagtaaaatcttaatatgtttgatggaattcaccattggagatacttttagaacatctgttaataaatcatttccaatgagtgaggggacaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
11744465 |
taaaaataagtaaaatcttaatatgtttgatggaattcaccattggagatacttttagaacatctgttaataaatcatttccaatgagtgacgggacaat |
11744564 |
T |
|
| Q |
201 |
aatgaatttagaatcataagtgaattattgcttcttttcttcatgttagaaa |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11744565 |
aatgaatttagaatcataagtgaattattgcttcttttcttcatgttagaaa |
11744616 |
T |
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