View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6889_low_2 (Length: 285)
Name: NF6889_low_2
Description: NF6889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6889_low_2 |
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Alignment Details
Target: chr6 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 7934671 - 7934946
Alignment:
| Q |
1 |
tttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctatgatgattatatgaattaatattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
7934671 |
tttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctaggatgattatatgaattaatattt |
7934770 |
T |
|
| Q |
101 |
aaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttatctccattacaaacaaatgtttcatcattatcttatttttcatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7934771 |
aaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttgtctccattacaaacaaatgtttcatcattatcttatttttcatt |
7934870 |
T |
|
| Q |
201 |
gttgtgtcttatgtacatccattatataaatgcaatggcctt-gcataattgtccacactgataccctcccctttg |
275 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
7934871 |
gttgtgtcttatgtacatccattatataaatgcaatggccttcacataattgtccacactgataccctcccctttg |
7934946 |
T |
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