View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6890_high_14 (Length: 289)
Name: NF6890_high_14
Description: NF6890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6890_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 46126606 - 46126350
Alignment:
| Q |
19 |
gaacccaactagtttgatgaacttgaacaatcctactagctttgaaaggaatgccaaacagtcttgagatcttgtaatcagtcatagcggaggagccttt |
118 |
Q |
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| T |
46126606 |
gaacccaactagtttgatgaacttgaacaatcctactagctttgaaaggaatgccaaacagtcttgagatcttgtaatcagtcatagcggaggagccttt |
46126507 |
T |
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| Q |
119 |
cacaatagccatatcaaaactaagctgaacttctgctatgatgctgtgaaacaaggtggccatggacttgtactgattattgaaatatctggcatttctc |
218 |
Q |
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| T |
46126506 |
cacaatatccatatcaaaactaagctgaacttctgctatgatgctgtgaaacaaggtggccatggacttgtactgattattgaaatatctggcatttctc |
46126407 |
T |
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| Q |
219 |
tccaaccatatactccatatagtatgaataatatcagtgttcataacctgctgcaca |
275 |
Q |
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| T |
46126406 |
tccaaccatatactccatatagtatgaataatatcagtgttcataacctgctgcaca |
46126350 |
T |
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