View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6890_low_29 (Length: 242)

Name: NF6890_low_29
Description: NF6890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6890_low_29
NF6890_low_29
[»] chr3 (58 HSPs)
chr3 (11-242)||(32094707-32094949)
chr3 (108-204)||(8097267-8097363)
chr3 (108-204)||(26174226-26174322)
chr3 (108-199)||(40133442-40133533)
chr3 (122-204)||(15566488-15566570)
chr3 (108-204)||(10190730-10190826)
chr3 (108-204)||(18176875-18176971)
chr3 (108-204)||(25289703-25289798)
chr3 (108-199)||(30257737-30257828)
chr3 (108-199)||(48977501-48977592)
chr3 (77-199)||(1178254-1178374)
chr3 (103-205)||(33698693-33698795)
chr3 (108-198)||(52821630-52821719)
chr3 (108-204)||(10083807-10083903)
chr3 (108-204)||(24165703-24165798)
chr3 (108-204)||(45272404-45272500)
chr3 (108-204)||(46576461-46576557)
chr3 (108-204)||(49258250-49258346)
chr3 (127-199)||(53848427-53848499)
chr3 (108-199)||(8456143-8456234)
chr3 (117-204)||(8958023-8958110)
chr3 (108-199)||(32151537-32151628)
chr3 (122-199)||(53424170-53424247)
chr3 (103-199)||(24407369-24407465)
chr3 (108-204)||(34492563-34492659)
chr3 (108-204)||(39041840-39041936)
chr3 (116-204)||(53233899-53233986)
chr3 (113-204)||(33398456-33398547)
chr3 (108-199)||(35493024-35493115)
chr3 (108-199)||(45529748-45529838)
chr3 (113-204)||(51532907-51532998)
chr3 (127-204)||(30807141-30807217)
chr3 (108-204)||(25379874-25379970)
chr3 (132-192)||(50731237-50731297)
chr3 (132-192)||(50781557-50781617)
chr3 (132-199)||(17579128-17579195)
chr3 (108-199)||(21363056-21363147)
chr3 (108-199)||(52455642-52455733)
chr3 (113-199)||(54475799-54475885)
chr3 (144-204)||(3747730-3747790)
chr3 (132-204)||(4048087-4048159)
chr3 (108-199)||(7195920-7196011)
chr3 (132-191)||(48105014-48105073)
chr3 (132-198)||(7485525-7485590)
chr3 (110-187)||(27887544-27887622)
chr3 (127-192)||(1692965-1693030)
chr3 (135-199)||(6041663-6041727)
chr3 (127-187)||(26158943-26159003)
chr3 (132-199)||(2511290-2511357)
chr3 (107-202)||(26599427-26599521)
chr3 (132-187)||(30695251-30695305)
chr3 (132-199)||(31537831-31537898)
chr3 (103-197)||(25344053-25344146)
chr3 (100-198)||(50583097-50583194)
chr3 (108-189)||(7203260-7203341)
chr3 (131-192)||(51390133-51390194)
chr3 (139-204)||(55287929-55287994)
chr3 (132-184)||(55371302-55371354)
[»] chr8 (49 HSPs)
chr8 (108-199)||(8765519-8765610)
chr8 (103-204)||(2639399-2639500)
chr8 (108-199)||(4718762-4718853)
chr8 (102-199)||(18128624-18128721)
chr8 (108-204)||(34237643-34237739)
chr8 (108-199)||(21603347-21603438)
chr8 (108-205)||(39349373-39349470)
chr8 (108-204)||(2618303-2618399)
chr8 (132-204)||(36848738-36848810)
chr8 (108-199)||(3734616-3734707)
chr8 (108-199)||(20306025-20306116)
chr8 (108-199)||(21092658-21092749)
chr8 (115-204)||(32879403-32879492)
chr8 (108-199)||(42328121-42328212)
chr8 (132-206)||(28193615-28193689)
chr8 (127-192)||(2166832-2166897)
chr8 (127-204)||(19471746-19471823)
chr8 (127-204)||(19542670-19542747)
chr8 (127-204)||(19589949-19590026)
chr8 (127-204)||(20470053-20470129)
chr8 (102-199)||(20505664-20505760)
chr8 (103-199)||(1219461-1219557)
chr8 (132-204)||(34610675-34610747)
chr8 (108-199)||(4698716-4698807)
chr8 (132-199)||(14633095-14633162)
chr8 (132-199)||(25248488-25248554)
chr8 (77-199)||(3403495-3403617)
chr8 (108-198)||(10292171-10292261)
chr8 (133-199)||(34694568-34694634)
chr8 (108-205)||(28964150-28964246)
chr8 (127-192)||(42643118-42643183)
chr8 (127-191)||(7557952-7558016)
chr8 (108-204)||(15259394-15259490)
chr8 (108-199)||(6953001-6953091)
chr8 (132-199)||(16990724-16990791)
chr8 (132-199)||(24018524-24018591)
chr8 (108-183)||(28088403-28088478)
chr8 (77-197)||(39317106-39317225)
chr8 (145-204)||(5740371-5740430)
chr8 (132-199)||(12312986-12313053)
chr8 (160-199)||(18532267-18532306)
chr8 (141-196)||(33534563-33534618)
chr8 (77-204)||(33746968-33747095)
chr8 (139-197)||(8042791-8042848)
chr8 (135-199)||(264393-264457)
chr8 (135-199)||(651464-651528)
chr8 (135-199)||(837199-837263)
chr8 (160-196)||(9047275-9047311)
chr8 (160-204)||(9713623-9713667)
[»] chr5 (53 HSPs)
chr5 (108-199)||(22392801-22392892)
chr5 (108-204)||(8484649-8484745)
chr5 (104-204)||(18207316-18207416)
chr5 (108-204)||(32059428-32059524)
chr5 (108-199)||(10869558-10869649)
chr5 (108-199)||(27498724-27498815)
chr5 (108-204)||(19456199-19456294)
chr5 (108-204)||(41351092-41351187)
chr5 (113-204)||(31287934-31288025)
chr5 (108-205)||(15641093-15641189)
chr5 (114-199)||(22693054-22693139)
chr5 (127-204)||(37495186-37495263)
chr5 (108-204)||(4603890-4603986)
chr5 (77-197)||(19145407-19145526)
chr5 (108-196)||(21236358-21236446)
chr5 (108-199)||(35425126-35425217)
chr5 (108-196)||(7085622-7085710)
chr5 (108-204)||(12398436-12398532)
chr5 (127-199)||(38630972-38631044)
chr5 (132-199)||(33709496-33709563)
chr5 (127-205)||(11926488-11926566)
chr5 (127-197)||(30485960-30486030)
chr5 (108-205)||(34310255-34310352)
chr5 (108-184)||(13108458-13108534)
chr5 (122-198)||(38684334-38684410)
chr5 (108-199)||(9659304-9659395)
chr5 (132-199)||(25750606-25750673)
chr5 (141-199)||(10631282-10631340)
chr5 (102-199)||(8821091-8821188)
chr5 (139-204)||(28614474-28614539)
chr5 (127-211)||(5067393-5067477)
chr5 (140-204)||(22648167-22648231)
chr5 (108-204)||(26009252-26009348)
chr5 (132-192)||(27487554-27487614)
chr5 (108-187)||(11464913-11464991)
chr5 (113-184)||(13038463-13038534)
chr5 (113-184)||(36954936-36955007)
chr5 (132-198)||(24158160-24158226)
chr5 (132-197)||(36895562-36895627)
chr5 (131-192)||(41084119-41084180)
chr5 (132-204)||(6014268-6014340)
chr5 (108-199)||(10399886-10399978)
chr5 (133-185)||(38086361-38086413)
chr5 (113-192)||(13659245-13659324)
chr5 (160-199)||(39229200-39229239)
chr5 (122-192)||(5049263-5049333)
chr5 (160-198)||(21377243-21377281)
chr5 (113-199)||(25548527-25548613)
chr5 (172-205)||(10612946-10612979)
chr5 (136-197)||(10837437-10837498)
chr5 (127-204)||(12317143-12317219)
chr5 (132-204)||(930474-930546)
chr5 (132-204)||(33737879-33737950)
[»] chr4 (52 HSPs)
chr4 (108-209)||(44343627-44343728)
chr4 (108-204)||(32986310-32986406)
chr4 (108-204)||(34844746-34844842)
chr4 (108-204)||(5609190-5609286)
chr4 (108-204)||(40058840-40058936)
chr4 (108-204)||(54127330-54127426)
chr4 (104-199)||(22488021-22488116)
chr4 (108-205)||(20077971-20078068)
chr4 (108-204)||(19660520-19660616)
chr4 (108-199)||(27528788-27528879)
chr4 (108-199)||(45787697-45787788)
chr4 (108-191)||(52983732-52983815)
chr4 (108-199)||(53787050-53787141)
chr4 (113-199)||(36131503-36131589)
chr4 (116-205)||(9978496-9978585)
chr4 (108-204)||(32990548-32990644)
chr4 (108-204)||(34723912-34724008)
chr4 (128-199)||(7093504-7093575)
chr4 (108-199)||(20566463-20566554)
chr4 (113-196)||(46714511-46714594)
chr4 (113-199)||(12824518-12824604)
chr4 (114-204)||(24273341-24273431)
chr4 (132-204)||(23131424-23131496)
chr4 (132-192)||(52494625-52494685)
chr4 (132-199)||(4064997-4065064)
chr4 (108-199)||(33696272-33696363)
chr4 (108-199)||(40252402-40252493)
chr4 (103-197)||(7391960-7392053)
chr4 (108-154)||(22625099-22625145)
chr4 (135-205)||(55158330-55158400)
chr4 (138-199)||(39288990-39289051)
chr4 (127-204)||(43719075-43719152)
chr4 (132-192)||(23639761-23639821)
chr4 (132-192)||(23645419-23645479)
chr4 (132-204)||(25852352-25852424)
chr4 (108-199)||(51535733-51535825)
chr4 (108-199)||(27574431-27574522)
chr4 (132-199)||(35229305-35229372)
chr4 (103-205)||(30879153-30879254)
chr4 (108-204)||(4912039-4912135)
chr4 (127-199)||(13017845-13017916)
chr4 (108-192)||(13771482-13771566)
chr4 (127-191)||(20527035-20527099)
chr4 (127-204)||(21387475-21387550)
chr4 (77-191)||(25969504-25969615)
chr4 (137-199)||(39343602-39343664)
chr4 (132-204)||(12710314-12710386)
chr4 (77-153)||(13716489-13716565)
chr4 (132-204)||(17637840-17637911)
chr4 (132-196)||(18875513-18875577)
chr4 (155-199)||(24672298-24672342)
chr4 (132-192)||(37302624-37302684)
[»] chr7 (46 HSPs)
chr7 (108-199)||(22120005-22120096)
chr7 (108-199)||(27312269-27312360)
chr7 (108-199)||(40542903-40542994)
chr7 (108-204)||(11997966-11998062)
chr7 (108-204)||(17196938-17197034)
chr7 (122-197)||(654700-654775)
chr7 (108-199)||(2751388-2751479)
chr7 (108-199)||(21835268-21835359)
chr7 (108-191)||(32849708-32849791)
chr7 (108-205)||(3851874-3851971)
chr7 (113-197)||(31197712-31197796)
chr7 (108-199)||(23012501-23012592)
chr7 (113-199)||(2344421-2344507)
chr7 (139-197)||(17279679-17279737)
chr7 (108-198)||(29861787-29861877)
chr7 (108-205)||(7275394-7275491)
chr7 (108-204)||(18044224-18044320)
chr7 (108-204)||(23092213-23092309)
chr7 (108-204)||(42913501-42913597)
chr7 (108-199)||(2103172-2103261)
chr7 (108-199)||(22703603-22703694)
chr7 (108-199)||(28089937-28090027)
chr7 (127-197)||(7175857-7175927)
chr7 (113-199)||(16374116-16374202)
chr7 (132-204)||(21574090-21574162)
chr7 (108-204)||(31274031-31274126)
chr7 (132-192)||(31712902-31712962)
chr7 (108-204)||(41907502-41907597)
chr7 (108-199)||(10091305-10091395)
chr7 (132-199)||(27009501-27009568)
chr7 (114-204)||(43785287-43785377)
chr7 (108-204)||(19421348-19421444)
chr7 (108-191)||(22638405-22638488)
chr7 (77-196)||(23330735-23330854)
chr7 (132-194)||(21217831-21217893)
chr7 (127-199)||(25333539-25333610)
chr7 (132-199)||(22696462-22696529)
chr7 (132-199)||(28647110-28647177)
chr7 (108-199)||(36772296-36772387)
chr7 (132-199)||(47381032-47381098)
chr7 (127-205)||(8943388-8943466)
chr7 (137-190)||(30345511-30345564)
chr7 (160-205)||(44933692-44933737)
chr7 (160-204)||(13332422-13332466)
chr7 (127-199)||(27704137-27704209)
chr7 (132-204)||(39145640-39145712)
[»] chr6 (26 HSPs)
chr6 (108-199)||(654139-654230)
chr6 (108-204)||(3222624-3222719)
chr6 (108-204)||(21982309-21982404)
chr6 (108-204)||(34147459-34147555)
chr6 (108-204)||(34160075-34160171)
chr6 (113-204)||(9239093-9239184)
chr6 (108-199)||(15360091-15360182)
chr6 (108-204)||(17081042-17081138)
chr6 (108-204)||(21148499-21148594)
chr6 (104-204)||(9844047-9844147)
chr6 (108-199)||(1345048-1345139)
chr6 (113-204)||(14213000-14213091)
chr6 (113-199)||(9208370-9208456)
chr6 (108-204)||(21903607-21903704)
chr6 (132-204)||(5360059-5360131)
chr6 (108-192)||(11448984-11449068)
chr6 (132-199)||(28672204-28672271)
chr6 (114-204)||(11841020-11841109)
chr6 (113-199)||(17149449-17149535)
chr6 (121-198)||(11007291-11007368)
chr6 (132-204)||(9690626-9690698)
chr6 (132-199)||(33499612-33499679)
chr6 (159-204)||(7491654-7491699)
chr6 (114-199)||(14504075-14504160)
chr6 (104-204)||(15730483-15730583)
chr6 (125-178)||(27866217-27866270)
[»] chr2 (47 HSPs)
chr2 (113-204)||(15038077-15038168)
chr2 (113-204)||(28668991-28669082)
chr2 (108-204)||(35171913-35172009)
chr2 (108-204)||(41329955-41330051)
chr2 (108-199)||(3943853-3943944)
chr2 (132-199)||(18692097-18692164)
chr2 (108-199)||(44946046-44946137)
chr2 (127-199)||(2140479-2140551)
chr2 (113-192)||(44610157-44610236)
chr2 (127-205)||(24196134-24196212)
chr2 (121-203)||(28194127-28194209)
chr2 (108-197)||(11941205-11941294)
chr2 (132-197)||(14486962-14487027)
chr2 (127-204)||(43374318-43374395)
chr2 (132-204)||(8192340-8192412)
chr2 (108-192)||(31778144-31778228)
chr2 (132-204)||(33827561-33827633)
chr2 (103-198)||(5394125-5394220)
chr2 (108-199)||(30466823-30466914)
chr2 (132-199)||(34516407-34516474)
chr2 (127-205)||(18976442-18976520)
chr2 (127-204)||(19054158-19054235)
chr2 (104-204)||(8259006-8259106)
chr2 (126-198)||(13089011-13089083)
chr2 (127-199)||(25293291-25293363)
chr2 (108-204)||(36242300-36242396)
chr2 (138-205)||(1845036-1845103)
chr2 (113-192)||(6714295-6714374)
chr2 (132-192)||(14946915-14946975)
chr2 (127-199)||(44929839-44929911)
chr2 (125-192)||(27269344-27269411)
chr2 (132-199)||(39957895-39957962)
chr2 (126-196)||(41314122-41314192)
chr2 (103-199)||(714118-714214)
chr2 (108-204)||(9400949-9401045)
chr2 (108-192)||(13266603-13266686)
chr2 (108-192)||(36390569-36390652)
chr2 (160-199)||(27290739-27290778)
chr2 (129-183)||(9641155-9641208)
chr2 (127-197)||(13599320-13599390)
chr2 (132-198)||(13747494-13747560)
chr2 (127-197)||(19174894-19174964)
chr2 (132-197)||(17324902-17324966)
chr2 (144-204)||(1501452-1501511)
chr2 (108-204)||(19849946-19850041)
chr2 (172-204)||(32306918-32306950)
chr2 (114-182)||(32526142-32526210)
[»] scaffold0102 (1 HSPs)
scaffold0102 (104-198)||(39201-39295)
[»] chr1 (45 HSPs)
chr1 (113-198)||(30677294-30677379)
chr1 (108-192)||(24122136-24122220)
chr1 (108-204)||(32729657-32729753)
chr1 (108-199)||(4621230-4621321)
chr1 (108-199)||(24674506-24674597)
chr1 (108-199)||(7766720-7766811)
chr1 (108-199)||(15059395-15059486)
chr1 (71-204)||(8254740-8254873)
chr1 (134-204)||(36155876-36155946)
chr1 (132-198)||(52135263-52135329)
chr1 (103-204)||(33905498-33905599)
chr1 (108-199)||(7578522-7578613)
chr1 (81-195)||(27159172-27159285)
chr1 (134-204)||(27454852-27454922)
chr1 (103-191)||(17935877-17935965)
chr1 (104-192)||(18533724-18533812)
chr1 (108-204)||(22909984-22910080)
chr1 (132-204)||(37351441-37351513)
chr1 (110-204)||(23734231-23734326)
chr1 (110-204)||(23741423-23741518)
chr1 (113-204)||(34778457-34778548)
chr1 (127-197)||(46607942-46608012)
chr1 (113-195)||(48699877-48699959)
chr1 (104-204)||(168310-168410)
chr1 (132-204)||(26513136-26513208)
chr1 (132-199)||(7197240-7197307)
chr1 (127-198)||(35138120-35138191)
chr1 (122-199)||(1379024-1379101)
chr1 (127-192)||(1486552-1486617)
chr1 (146-199)||(14603947-14604000)
chr1 (135-199)||(9926139-9926203)
chr1 (132-192)||(23041659-23041719)
chr1 (100-191)||(36921513-36921604)
chr1 (144-199)||(30043473-30043528)
chr1 (113-199)||(45331614-45331701)
chr1 (113-204)||(45859031-45859122)
chr1 (113-191)||(88499-88577)
chr1 (108-190)||(8077760-8077841)
chr1 (130-192)||(16539742-16539804)
chr1 (103-204)||(2272452-2272553)
chr1 (142-199)||(5315478-5315535)
chr1 (132-192)||(9500355-9500415)
chr1 (103-199)||(14667489-14667585)
chr1 (103-187)||(18646961-18647045)
chr1 (17-57)||(52135141-52135181)
[»] scaffold0070 (1 HSPs)
scaffold0070 (108-204)||(40438-40533)
[»] scaffold0049 (1 HSPs)
scaffold0049 (108-204)||(66867-66963)
[»] scaffold0026 (1 HSPs)
scaffold0026 (108-204)||(97354-97450)
[»] scaffold0019 (1 HSPs)
scaffold0019 (108-204)||(161922-162018)
[»] scaffold0576 (1 HSPs)
scaffold0576 (108-199)||(5075-5166)
[»] scaffold0366 (2 HSPs)
scaffold0366 (108-204)||(9288-9383)
scaffold0366 (108-204)||(11989-12084)
[»] scaffold0217 (1 HSPs)
scaffold0217 (108-204)||(7297-7393)
[»] scaffold0623 (1 HSPs)
scaffold0623 (108-204)||(1045-1140)
[»] scaffold0016 (1 HSPs)
scaffold0016 (108-204)||(32401-32496)
[»] scaffold1175 (1 HSPs)
scaffold1175 (108-199)||(2419-2510)
[»] scaffold0328 (1 HSPs)
scaffold0328 (113-204)||(13035-13126)
[»] scaffold0051 (1 HSPs)
scaffold0051 (108-199)||(52864-52955)
[»] scaffold0459 (1 HSPs)
scaffold0459 (108-204)||(10683-10777)
[»] scaffold0160 (1 HSPs)
scaffold0160 (141-199)||(29136-29194)
[»] scaffold0199 (1 HSPs)
scaffold0199 (132-197)||(8446-8511)
[»] scaffold0068 (1 HSPs)
scaffold0068 (108-204)||(41633-41728)
[»] scaffold0171 (1 HSPs)
scaffold0171 (113-196)||(11416-11499)


Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 32094949 - 32094707
Alignment:
Q  11 acatcatctaatggttgatttgggatcttggagtttgatcatctcaaagtcacacgttc-----------atgtcactttcggtggacaagttcatatgg 99  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||           |||||||||||||| |||||||||||| ||    
T  32094949 acatcatctagtggttggtttgggatcttggagtttgatcatctcaaagtctgacgttcgactatctctgatgtcactttcggtagacaagttcatacgg 32094850  T
Q  100 aactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  32094849 aactttgttctgcctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttcaaaaaa 32094750  T
Q  200 caaaatggttatcatatgaatctttgttcgaagcaattcctct 242  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  32094749 caaaatggttatcatatgaatcattgttcgaagcaattcctct 32094707  T

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Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 8097363 - 8097267
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  8097363 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 8097267  T

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Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 26174226 - 26174322
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||| |||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  26174226 tctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 26174322  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 40133533 - 40133442
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  40133533 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaa 40133442  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 15566570 - 15566488
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||| ||||    
T  15566570 gggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 15566488  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 10190826 - 10190730
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| |||||| |||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  10190826 tctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 10190730  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 18176971 - 18176875
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||||||  |||||||| || ||||||||||||| ||||||| |||||| ||||    
T  18176971 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagttttaaaaaaaaaaaa 18176875  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 25289798 - 25289703
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  25289798 tctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcgaattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 25289703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 30257737 - 30257828
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||| |||| ||||||||||||| ||||||||| ||  |||||||| || |||||||||||||||| |||||||||||    
T  30257737 tctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattttcaaaaaa 30257828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 48977501 - 48977592
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| || | ||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||||||||||    
T  48977501 tctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaaaa 48977592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 1178254 - 1178374
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||||| ||||  |||||||| |||| ||||||||||||| |||  | ||||||||||||||||||||| ||  ||||||||  | |||||    
T  1178254 tttcggtgggcaagtccatacagaactttgctctggctttaaatggggc-cccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttgga 1178351  T
Q  177 tcggataccgagttttcaaaaaa 199  Q
    |||||||||||||||||||||||    
T  1178352 tcggataccgagttttcaaaaaa 1178374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 33698795 - 33698693
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    |||| |||| ||||||| |||||||||| || |||| ||||||||||||||| ||| |||||||| || | ||||||||| |||||||||||||||| ||    
T  33698795 tttgctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttcaaaaaaaaa 33698696  T
Q  203 aat 205  Q
    |||    
T  33698695 aat 33698693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 52821719 - 52821630
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||    
T  52821719 tctggctttaaacggggc-cccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaa 52821630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 10083903 - 10083807
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||  |||||| |||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  10083903 tctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 10083807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 24165798 - 24165703
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  24165798 tctggctttaaacggggc-cccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttcaaaaaataaaa 24165703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 45272500 - 45272404
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||| |  | |||||||||||||||||||||||||||| ||||    
T  45272500 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttcaaaaaaaaaaa 45272404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 46576461 - 46576557
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||| ||||||||||| |   |||||||| || |||||||||||||||||||||||||||| ||||    
T  46576461 tctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 46576557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 49258346 - 49258250
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||  ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  49258346 tctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 49258250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 53848499 - 53848427
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  53848499 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 53848427  T

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Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 8456234 - 8456143
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| |||||||| |||||||||||||| ||  |||||||| || ||| ||||||||||||||||||||||||    
T  8456234 tctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaaaa 8456143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 8958110 - 8958023
Alignment:
Q  117 aaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||| |||| ||||||||||||||||||||||| ||  |||| ||| || ||||||| |||||||||||||||||||| ||||    
T  8958110 aaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttttcaaaaaaaaaaa 8958023  T

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Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 32151537 - 32151628
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| |||||||||||| |||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  32151537 tctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttttaaaaaa 32151628  T

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Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 53424247 - 53424170
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||| ||||| ||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  53424247 gggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 53424170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 24407369 - 24407465
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||| ||||||| |||||   || ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  24407369 tttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 24407465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 34492659 - 34492563
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||  ||| |||||| | || ||||||| ||||||||||||| |||||| ||||    
T  34492659 tctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttttaaaaaaaaaaa 34492563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 39041936 - 39041840
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||| ||||||||||||||  ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  39041936 tctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 39041840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 53233986 - 53233899
Alignment:
Q  116 taaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || || ||||||||||||||||||||||||| ||||    
T  53233986 taaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaaaaaaaaa 53233899  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 33398547 - 33398456
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||| |||| |||||||||||||||||||| || ||  |||||||| || |||||||||||||||| |||| |||||| ||||    
T  33398547 ctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaattttaaaaaaaaaaaa 33398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 35493024 - 35493115
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||| | |||||||||||| ||||||    
T  35493024 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttttaaaaaaa 35493115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 45529838 - 45529748
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || || |||||||||||||||||||||||||    
T  45529838 tctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaaaa 45529748  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 51532907 - 51532998
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| | |||| |||||| |||||||||||||||| ||| ||||||||||| |||   || ||||||||||||||||||| ||||    
T  51532907 ctttaaatgggacccccgcaagtggacggtgggattggtcccctcagattagtcggttcttgatccgaataccgagttttcaaaaaaaaaaa 51532998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 30807217 - 30807141
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||| ||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  30807217 cccgcaagtgggcggtaggattggtccc-tcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 30807141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 25379874 - 25379970
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||| ||||||||||||||||||| ||  |||||||| || ||||||||||||| ||||||  |||||| ||||    
T  25379874 tctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagtttaaaaaaaaaaaaa 25379970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 50731297 - 50731237
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||||||||||||| ||| |||||||| |  |||||||||||||||||||||    
T  50731297 aagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 50781557 - 50781617
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||||||||||||| ||| |||||||| |  |||||||||||||||||||||    
T  50781557 aagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 17579195 - 17579128
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||| |||||||||| ||| |||||||| ||||||||||| ||| |||||||||| ||||    
T  17579195 aagtgggcggtgagattggtcccctcagattagtcgatttttggatcgaatatcgagttttcagaaaa 17579128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 21363056 - 21363147
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| || || |||| |||||||||||||||||||| || ||  |||| ||| || ||||||||||||||||||||| ||||||    
T  21363056 tctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttttaaaaaaa 21363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 52455733 - 52455642
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| |||||   ||||||||||||||| ||  |||||||| || |||||| |||||||||||||||||||||    
T  52455733 tctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttcaaaaaa 52455642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 54475799 - 54475885
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| |||||  ||| ||||||||||||||||||||||| |   |||||||| || ||||||| ||||||||||||| ||||||    
T  54475799 ctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttttaaaaaaa 54475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 3747730 - 3747790
Alignment:
Q  144 ggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 3747790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 4048087 - 4048159
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| |||||||||||||||| ||  |||||| | || ||||||||||||||||||||| |||||| ||||    
T  4048087 aagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttttaaaaaaaaaaaa 4048159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 7195920 - 7196011
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||| | |||  | |||||| |||||||||||||| ||| |||||||| || || |||  ||||||||||||||||||||    
T  7195920 tctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagttttcaaaaaa 7196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 48105014 - 48105073
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||||||||||| |||||||||| ||  |||||||| || ||||||||||||||||||||    
T  48105014 aagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 7485590 - 7485525
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||| |||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||    
T  7485590 aagtggccggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttaaaaaa 7485525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 27887544 - 27887622
Alignment:
Q  110 tgcctttaaatggg-gctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccga 187  Q
    |||||||||||| | ||||||||||||||| ||| |||||||||  |||  ||||||||||| || |||||||||||||    
T  27887544 tgcctttaaatgagagctcccgtaagtgggtggtaggattggtctaatcggattagtcggttcttagatcggataccga 27887622  T

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Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 1692965 - 1693030
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||||||||||||| | ||| ||| |||||||| || ||| |||||||||||||||||    
T  1692965 cccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6041727 - 6041663
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||||| |||| | | ||||||||||| ||||||| ||||||||||||| ||||||    
T  6041727 tgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagttttaaaaaaa 6041663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 26158943 - 26159003
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccga 187  Q
    |||| |||||||||||||||||| |||| ||  ||||||||||  ||||||||||||||||    
T  26158943 cccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 2511357 - 2511290
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||| | ||  |||||| | || ||| |||||||||| |||||||||||||    
T  2511357 aagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagttttcaaaaaa 2511290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 26599427 - 26599521
Alignment:
Q  107 ttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    ||||| |||||||||| || |||  |||||| |||||||||||| ||| ||| ||| |||||| |||||  | |||||||| ||||||||||||||    
T  26599427 ttctggctttaaatggcgc-cccacaagtggacggtgggattggacccctcagattggtcggtctttgggccagataccgacttttcaaaaaacaa 26599521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 30695305 - 30695251
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccga 187  Q
    ||||||||| ||||||||||||| ||| ||||||||||  ||||||||||||||||    
T  30695305 aagtgggcgatgggattggtccc-tcagattagtcggtccttggatcggataccga 30695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 31537898 - 31537831
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||| |||||||||| ||  |||||||  || |||||||||||| |||||||| ||||||    
T  31537898 aagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagttttaaaaaaa 31537831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 25344146 - 25344053
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| |||| ||||||| ||||| ||||  |||||||| |||||||||| || ||  |||||||| || || ||||| |||||||||||||||||    
T  25344146 tttgctctggctttaaacggggcccccgctagtgggcgatgggattggttcc-tcggattagtcgattcttagatcgaataccgagttttcaaaa 25344053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 50583097 - 50583194
Alignment:
Q  100 aactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    ||||||| | || |||||||||| || |||||||||| ||||||||||||||||  ||  |||||||||||  | ||  ||||||| ||||||||||||    
T  50583097 aactttgatttgactttaaatggagc-cccgtaagtgagcggtgggattggtcctctcgaattagtcggttgatagactggataccaagttttcaaaaa 50583194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 7203260 - 7203341
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagt 189  Q
    |||| ||||||||||| |||||  |||||||   ||||||||||||| ||| ||||||||||| || |||| ||||| ||||    
T  7203260 tctgactttaaatgggcctcccacaagtgggaaatgggattggtcccttcagattagtcggttctttgatcagatactgagt 7203341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 51390194 - 51390133
Alignment:
Q  131 taagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||| |||||||||| ||  ||||||||||| || || |||||||||| ||||    
T  51390194 taagtgggcggtgagattggtcccctcggattagtcggttgttagaccggataccgattttt 51390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 55287929 - 55287994
Alignment:
Q  139 cggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||| ||||| |   |||||||| || |||||||||||||||| ||||||||||| ||||    
T  55287929 cggtgggattagtccccttgaattagtcgattattggatcggataccgaattttcaaaaaaaaaaa 55287994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 55371354 - 55371302
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggatac 184  Q
    ||||||||||||||||||||||| ||  |||||||| |  |||||||||||||    
T  55371354 aagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 8765610 - 8765519
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  8765610 tctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 8765519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 2639500 - 2639399
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    |||| |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaa 2639401  T
Q  203 aa 204  Q
    ||    
T  2639400 aa 2639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 4718762 - 4718853
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  4718762 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 4718853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 18128624 - 18128721
Alignment:
Q  102 ctttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||| |||| ||||||| ||||| |||| ||||||||||||||||||||||  ||| ||||||||||| |||||||| |||||||||||| ||||||    
T  18128624 ctttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttttaaaaaaa 18128721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 34237739 - 34237643
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||| ||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  34237739 tctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 34237643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 21603347 - 21603438
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  21603347 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 21603438  T

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Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 39349373 - 39349470
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||||| ||||||||||||| |||||    
T  39349373 tctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttcaaaaaaaaaaat 39349470  T

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Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 2618303 - 2618399
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| || || |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||| |||||||||||||||| ||||    
T  2618303 tctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttcaaaaaaaaaaa 2618399  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 36848810 - 36848738
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| | ||||||||||| ||||    
T  36848810 aagtgggcggtgggattagtcccctcaaattagtcggtttttggatcggataccaaattttcaaaaaaaaaaa 36848738  T

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Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 3734707 - 3734616
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| || ||||| |||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  3734707 tctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 3734616  T

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Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 20306025 - 20306116
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| |  ||||||||||||||||||||||||||||    
T  20306025 tctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttcaaaaaa 20306116  T

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Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 21092658 - 21092749
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| |  ||||||||||||||||||||||||||||    
T  21092658 tctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttcaaaaaa 21092749  T

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Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 32879403 - 32879492
Alignment:
Q  115 ttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||| ||||| |||  ||||||||||||||||||||||| ||  |||||||| || |||||| ||||||||||||||||||||| ||||    
T  32879403 ttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttcaaaaaaaaaaa 32879492  T

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Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 42328121 - 42328212
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||  |||||| || ||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  42328121 tctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaa 42328212  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 28193615 - 28193689
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaatg 206  Q
    ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||  |||||| ||||||    
T  28193615 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaaaataaaatg 28193689  T

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Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 2166832 - 2166897
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||||||||||||||||||| ||| |||||||| ||||| ||| ||||||||||||||    
T  2166832 cccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

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Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 19471746 - 19471823
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||| ||||||||||||| ||  |||||||| |  |||||||||||||||||||||||||||| ||||    
T  19471746 cccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaaaaaaaaa 19471823  T

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Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 19542670 - 19542747
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||| ||||||||||||| ||  |||||||| |  |||||||||||||||||||||||||||| ||||    
T  19542670 cccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaaaaaaaaa 19542747  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 19590026 - 19589949
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||| ||||||||||||| ||  |||||||| |  |||||||||||||||||||||||||||| ||||    
T  19590026 cccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaaaaaaaaa 19589949  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 20470053 - 20470129
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||||||||||||||| || ||  |||||||| |||||||||||||||||||||||| |||||| ||||    
T  20470053 cccgcaagtgggcggtgggattggttcc-tcggattagtcgatttttggatcggataccgagttttaaaaaaaaaaaa 20470129  T

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Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 20505664 - 20505760
Alignment:
Q  102 ctttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| || |||||||| |||| || | ||||||||||||||||||||||| ||| ||||| ||||| || |||| ||| ||||||||||||||||    
T  20505664 ctttgttttggctttaaatagggcacc-gcaagtgggcggtgggattggtcccctcaaattagccggttcttagatcagatgccgagttttcaaaaaa 20505760  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 1219461 - 1219557
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||||||| ||||| ||| |||||||||||| |||| |||||| ||  |||||||| || || ||||| ||||||| |||||||||||    
T  1219461 tttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaataccgaattttcaaaaaa 1219557  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 34610747 - 34610675
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| | ||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  34610747 aagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 34610675  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 4698807 - 4698716
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| || || |||| ||||| ||||||||||||||||| ||  |||||||| ||  ||||| |||||||||||||||||||||    
T  4698807 tctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttcaaaaaa 4698716  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 14633095 - 14633162
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| |   |||||||| || |||||||||||||| |||||||||||||    
T  14633095 aagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttcaaaaaa 14633162  T

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Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 25248488 - 25248554
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  |||||||| ||||| |||||||||||||||||| ||||||    
T  25248488 aagtgggcggtgggattggtcccctcggattagtcgattttt-gatcggataccgagttttaaaaaaa 25248554  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 3403617 - 3403495
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||||| ||||   ||||||||| || ||||||||||||| | ||||||||||||||| | |||||||| ||  |||||||  || || ||    
T  3403617 tttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtgaggttggtcccctcgaattagtcaattcttaga 3403518  T
Q  177 tcggataccgagttttcaaaaaa 199  Q
     | ||||||||||||| ||||||    
T  3403517 ccagataccgagtttttaaaaaa 3403495  T

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Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 10292171 - 10292261
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| ||||||| ||||| |||  ||||||||||||||||||||||| ||  |||||| | || |||||||| |||||||||||| |||||    
T  10292171 tctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttttaaaaa 10292261  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 34694634 - 34694568
Alignment:
Q  133 agtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||| |||||||||||||||| ||| ||||||| ||  |||||||||||| |||||||||||||||    
T  34694634 agtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagttttcaaaaaa 34694568  T

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Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 28964150 - 28964246
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||| |||| ||||||||| ||||||||||||| ||  |||||||| || || ||||| |||| |||||||||||||| |||||    
T  28964150 tctggctttaaacggggcccccgcaagtgggcg-tgggattggtcccctcgaattagtcgattcttagatcgaatactgagttttcaaaaaaaaaaat 28964246  T

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Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 42643183 - 42643118
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||||||||||||||||||| ||  |||||| | || |||||||||||||||||||||    
T  42643183 cccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

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Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 7558016 - 7557952
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||| |||||| |||||||||||||||| ||  |||||||| |||||| ||||||||||||||||    
T  7558016 cccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 15259490 - 15259394
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||  ||||||||| ||  |||||||| || ||||||||||| ||||||||  |||||| ||||    
T  15259490 tctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagtttaaaaaaaaaaaaa 15259394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 6953091 - 6953001
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||  |||| |||| |||| |||||||||||||||||| ||  |||||||| || |||||||| |||||||||||| ||||||    
T  6953091 tctggctttaaacagggcccccgcaagttggcggtgggattggtccc-tcggattagtcgattcttggatcgaataccgagttttaaaaaaa 6953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 16990724 - 16990791
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||| ||||||| |   ||||||||||  |||||||||||||| |||||||||||||    
T  16990724 aagtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttcaaaaaa 16990791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 24018524 - 24018591
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||| |||||||||| |   ||||||||||| ||||| |||||| |||||||||||||||    
T  24018524 aagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttttcaaaaaa 24018591  T

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Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 28088403 - 28088478
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggata 183  Q
    |||| |||||||||||||  ||| |||||||||||||||||| |||| ||| | |||||| || ||||||||||||    
T  28088403 tctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

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Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 39317106 - 39317225
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||| ||||||||||||||| ||||||||   || ||||| ||||| | || | ||||| |||||| ||||| |||| |||||||| |||||| ||| |    
T  39317106 tttcgttggacaagttcatatagaactttgcagtgactttatatgggac-cctgcaagtgtgcggtgagattgatcccctcatattaatcggttcttgaa 39317204  T
Q  177 tcggataccgagttttcaaaa 197  Q
    || |||||| |||||| ||||    
T  39317205 tcagataccaagttttgaaaa 39317225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 5740430 - 5740371
Alignment:
Q  145 gattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||| ||  ||||||||||  |||||||||| ||||||||||||||||| ||||    
T  5740430 gattggtcccctcggattagtcggtccttggatcggacaccgagttttcaaaaaagaaaa 5740371  T

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Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 12312986 - 12313053
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||||||||| |||| ||  ||||||||||| || || |||| |||||||||| ||||||    
T  12312986 aagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttttaaaaaa 12313053  T

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Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 18532267 - 18532306
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  18532267 attagtcgattcttggatcggataccgagttttcaaaaaa 18532306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 33534618 - 33534563
Alignment:
Q  141 gtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    |||||||||||||| ||  ||||||||||  ||||||||| |||||||||||||||    
T  33534618 gtgggattggtcccttcggattagtcggtccttggatcggttaccgagttttcaaa 33534563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 33746968 - 33747095
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||| |||||||  | ||||||||||  ||  || || || |||| |||||| |||||| |||||| |  ||  |||||||| |  |||||    
T  33746968 tttcggtgggcaaattcatataaagctttgttctggtttagaacggagcccccgcaagtggacggtggaattggttctctcggattagtcgatccttgga 33747067  T
Q  177 tcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||||| ||||    
T  33747068 tcggataccgagttttcaaaaaaaaaaa 33747095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 8042791 - 8042848
Alignment:
Q  139 cggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||||||||||||||| | | |||| |||||| ||||||||||||| ||||||||||||    
T  8042791 cggtgggattggtcccttga-attaatcggttcttggatcggatactgagttttcaaaa 8042848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 264457 - 264393
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||||| |||| ||  |||||||| || |||||||||||||||| |||| ||||||    
T  264457 tgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 264393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 651464 - 651528
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||||| |||| ||  |||||||| || |||||||||||||||| |||| ||||||    
T  651464 tgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 651528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 837199 - 837263
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||||| |||| ||  |||||||| || |||||||||||||||| |||| ||||||    
T  837199 tgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 837263  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 9047311 - 9047275
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaa 196  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  9047311 attagtcggttcttggatcggataccgaattttcaaa 9047275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 9713623 - 9713667
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||| || ||||||||||||||||||||| |||||| ||||    
T  9713623 attagtcgattcttggatcggataccgagtttttaaaaaaaaaaa 9713667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 22392801 - 22392892
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  22392801 tctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttcaaaaaa 22392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 8484745 - 8484649
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  8484745 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 8484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 18207316 - 18207416
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    |||||||| ||||||| | ||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| |||    
T  18207316 ttgttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaa 18207415  T
Q  204 a 204  Q
    |    
T  18207416 a 18207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 32059524 - 32059428
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  ||||||||||  |||||||||||||||||||||||||||| ||||    
T  32059524 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaaaaaaaaa 32059428  T

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Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 10869649 - 10869558
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||||||||  ||| ||||||||||||||||||||||| ||  ||||||||||| |||||||||||||| |||||||||||||    
T  10869649 tctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttcaaaaaa 10869558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 27498815 - 27498724
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  27498815 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 27498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 19456294 - 19456199
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  19456294 tctggctttaaacggggc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 19456199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 41351187 - 41351092
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  41351187 tctggctttaaacggggctcc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 41351092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 31288025 - 31287934
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||| |||| ||||||||||||||||||||| | ||  ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  31288025 ctttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttcaaaaaaaaaaa 31287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 15641189 - 15641093
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || || ||||||||||||||||||||||||| |||||    
T  15641189 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaaaaaaaaat 15641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 22693054 - 22693139
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 22693139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 37495186 - 37495263
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 37495263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 4603890 - 4603986
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| || | |||||| |||||||||||||||| ||  ||||||||||  |||||||||||||||||||||||||||| ||||    
T  4603890 tctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaaaaaaaaa 4603986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 19145526 - 19145407
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||||| ||||  || ||||| |||| ||||||||||  | |||| ||||||||||||||||||||||| ||  |||||| |||| |||||    
T  19145526 tttcggtgggcaagtccatacagagctttgctctggctttaaatggtcc-cccgcaagtgggcggtgggattggtcccctcggattagttggttcttgga 19145428  T
Q  177 tcggataccgagttttcaaaa 197  Q
    |||||||||||||||| ||||    
T  19145427 tcggataccgagttttaaaaa 19145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 21236446 - 21236358
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    |||| ||||||| ||||| |||| ||||||||||||||||| ||||| ||| |||||||| || ||| |||||||||||||||||||||    
T  21236446 tctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttcaaa 21236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 35425126 - 35425217
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||  ||  |||||||| || |||||||||||||||| |||||||||||    
T  35425126 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaattttcaaaaaa 35425217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 7085710 - 7085622
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    |||| ||||||| ||||  |||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||||||||||||||||    
T  7085710 tctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaa 7085622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 12398532 - 12398436
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| || ||| ||||| ||||| |||  ||| ||||||||||| |||||| ||||||||||||||||||||| ||||    
T  12398532 tctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttttcaaaaaataaaa 12398436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 38631044 - 38630972
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||||||||||||| ||  |||| ||| || ||||||||||||||||||||||||||||    
T  38631044 cccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttcaaaaaa 38630972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 33709563 - 33709496
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||| ||||||||||||    
T  33709563 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttttcaaaaaa 33709496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 11926566 - 11926488
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||| |||||    
T  11926566 cccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaaaaaaat 11926488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 30485960 - 30486030
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| ||||||||||||||||||||||| ||  |||||||  || ||||||||||||||||||||||||||    
T  30485960 cccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttcaaaa 30486030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 34310255 - 34310352
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||| | ||| ||||||| |||||||||||||||| ||  |||| ||| || ||||||||||||||||||||| |||||| |||||    
T  34310255 tctggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagttttaaaaaaaaaaaat 34310352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 13108534 - 13108458
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggatac 184  Q
    |||||||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||||    
T  13108534 tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 38684334 - 38684410
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| |||| ||||| ||||||||||||||||| ||  |||||||| || |||||||||||||||| ||||||||||    
T  38684334 gggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgatttttcaaaaa 38684410  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 9659395 - 9659304
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||| | |||| |||||| |||||||||||||||| ||  |||||| | || |||||| |||||||||||||| ||||||    
T  9659395 tctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagttttaaaaaaa 9659304  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 25750673 - 25750606
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| |||| |||||||||| ||| |||||||| || ||||||||||||||||||||| ||||||    
T  25750673 aagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagttttaaaaaaa 25750606  T

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Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 10631340 - 10631282
Alignment:
Q  141 gtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 10631282  T

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Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 8821091 - 8821188
Alignment:
Q  102 ctttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||| |||| |||||||| |||||||   ||||||| ||||||||||||| | ||  |||||||  || ||||||| ||||||||||||||||||||    
T  8821091 ctttgctctggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagttttcaaaaaa 8821188  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 28614539 - 28614474
Alignment:
Q  139 cggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| |||| ||  |||||||| |||||||||||||||||||||||| |||||| ||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttttaaaaaaaaaaa 28614474  T

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Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 5067393 - 5067477
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaatggttat 211  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||| | ||| |||| |||||| ||||| |||||    
T  5067393 cccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcggagatcgaattttaaaaaaaaaaaattgttat 5067477  T

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Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 22648167 - 22648231
Alignment:
Q  140 ggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||| |||| ||| |||||||||| |||||||||||||||||||||  |||||| ||||    
T  22648167 ggtgggattgatcccctcagattagtcggtctttggatcggataccgagtttaaaaaaaataaaa 22648231  T

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Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 26009348 - 26009252
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| |||||||  |||||||| ||||| ||  ||||||||||| ||| |||| ||| ||||||||||||||| ||||    
T  26009348 tctggctttaaacggggcccccgcaagtgggtagtgggattagtcccctcggattagtcggttcttgaatcgaatatcgagttttcaaaaaaaaaaa 26009252  T

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Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 27487614 - 27487554
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||||||||||||| ||  |||||||| || ||||||||||||| |||||||    
T  27487614 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagtttt 27487554  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 11464991 - 11464913
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccga 187  Q
    |||| ||||||| ||||| |||| ||||||| ||||||||||||||| ||  |||||||| || ||||||||||||||||    
T  11464991 tctggctttaaacggggc-cccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

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Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 13038534 - 13038463
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggatac 184  Q
    ||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||||    
T  13038534 ctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

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Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 36954936 - 36955007
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggatac 184  Q
    ||||||||||| | |||| |||||| | |||||||| ||||| |||||||||||| || |||||||||||||    
T  36954936 ctttaaatgggccccccgcaagtggactgtgggattagtcccctcatattagtcgattcttggatcggatac 36955007  T

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Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 24158226 - 24158160
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||||||||| |||||||||| ||| ||||||||||  ||| |||||||||||| |||| |||||    
T  24158226 aagtgggcggtgagattggtcccctcagattagtcggtccttgaatcggataccgaattttaaaaaa 24158160  T

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Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 36895562 - 36895627
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||||||||| ||||||| || | ||  ||||||||||| ||||||||||||||||||||| ||||    
T  36895562 aagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagttttaaaaa 36895627  T

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Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 41084119 - 41084180
Alignment:
Q  131 taagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||||||||| |||||| |||| ||  ||||||||||| ||| |||||||||||||||||    
T  41084119 taagtgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

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Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 6014340 - 6014268
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||||| |||| ||||| ||  |||||||| || |||||||||||| |||||||| |||||| ||||    
T  6014340 aagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttttaaaaaaaaaaaa 6014268  T

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Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 10399886 - 10399978
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtc-ccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| ||||||||||| |||||||||||||| || ||  |||||||| || |||||||  ||| |||||||| ||||||    
T  10399886 tctgactttaaacggggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaatagcgagttttaaaaaaa 10399978  T

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Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 38086413 - 38086361
Alignment:
Q  133 agtgggcggtgggattggtcccatcatattagtcggtttttggatcggatacc 185  Q
    ||||| |||||||||||||||| ||| ||||||||||| ||||||| ||||||    
T  38086413 agtggacggtgggattggtcccttcaaattagtcggttcttggatcagatacc 38086361  T

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Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 13659324 - 13659245
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||| ||| | |||| |||||||||||||||||| |||| ||  |||| ||| || |||||||||||||||| ||||    
T  13659324 ctttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttt 13659245  T

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Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 39229239 - 39229200
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  39229239 attagtcggtttttagatcggatatcgagttttcaaaaaa 39229200  T

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Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 5049263 - 5049333
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| |||| || ||| |||||||||||||||||||  |||||||| || |||||||| ||||| ||||||    
T  5049263 gggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

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Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 21377281 - 21377243
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  21377281 attagtcggtctttggatcggataccgagttttcgaaaa 21377243  T

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Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 25548613 - 25548527
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| | || ||||| ||||  |||||||||||||||   ||  |||||||| || |||||||| |||||||||||||||||||    
T  25548613 ctttaaaagaggttcccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttcaaaaaa 25548527  T

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Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 10612979 - 10612946
Alignment:
Q  172 ttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||||||||||||||||||||||||||| |||||    
T  10612979 ttggatcggataccgagttttcaaaaaaaaaaat 10612946  T

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Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 10837437 - 10837498
Alignment:
Q  136 gggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||||||| |||||||||| ||| |||||| |||  || |||||||||||||||||| ||||    
T  10837437 gggcggtgagattggtcccctcagattagttggtccttagatcggataccgagttttaaaaa 10837498  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 12317219 - 12317143
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| |||||||||| |||| ||  |||||||  || || ||||||||||||||||||||||||| ||||    
T  12317219 cccgcaagtgggtggtgggattgatccc-tcggattagtcaattcttagatcggataccgagttttcaaaaaaaaaaa 12317143  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 930546 - 930474
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| | ||| |||||||||| ||  ||||||||||  |||||||||||| |||||||| |||||| ||||    
T  930546 aagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagttttaaaaaaataaaa 930474  T

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Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 33737879 - 33737950
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||||| |||||||||| ||   ||||| | || ||| |||||||||||||||||||||||| ||||    
T  33737879 aagtgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagttttcaaaaaaaaaaa 33737950  T

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Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 44343627 - 44343728
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaatgg 207  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||||||||||||||||||| |||| ||    
T  44343627 tctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttcaaaaaaaaaaaagg 44343726  T
Q  208 tt 209  Q
    ||    
T  44343727 tt 44343728  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 32986310 - 32986406
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||| ||  | |||||| || |||||||||||||||||||||||||||| ||||    
T  32986310 tctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 32986406  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 34844842 - 34844746
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  34844842 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 34844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 5609286 - 5609190
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| |||||| ||||||||||| |||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  5609286 tctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 5609190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 40058936 - 40058840
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||| ||| ||||    
T  40058936 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaacaaaaaaaa 40058840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 54127426 - 54127330
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  ||||||||||| ||||| ||||||| |||||||||||||| ||||    
T  54127426 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttcaaaaaaaaaaa 54127330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 22488116 - 22488021
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||| ||||||| ||||| |||| || ||||||||||||||| |||| ||| ||||||||||  |||||||||||||| |||||||||||||    
T  22488116 ttgttctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttcaaaaaa 22488021  T

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Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 20078068 - 20077971
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||| |||||||||||||||||||||| || || ||  |||||||| || ||||||||||||||||||| |||||||| |||||    
T  20078068 tctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagttgtcaaaaaaaaaaat 20077971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 19660616 - 19660520
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||  |||| |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  19660616 tctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 19660520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 27528879 - 27528788
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||| | ||||| |||| |||||||||||| |||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  27528879 tctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 27528788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 45787788 - 45787697
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||  |||| |||| |||||| |||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  45787788 tctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaa 45787697  T

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Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 52983732 - 52983815
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||    
T  52983732 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 53787141 - 53787050
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| || || |||| || |||||||||||||| ||||| ||| |||||||||||||||||||| |||||| ||||||||||||    
T  53787141 tctggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggtttttggatcgaataccgggttttcaaaaaa 53787050  T

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Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 36131589 - 36131503
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||  |||||||| || || |||| ||||||||||||||||||||    
T  36131589 ctttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttcaaaaaa 36131503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 9978585 - 9978496
Alignment:
Q  116 taaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||||||| | |||| ||||||||||||||||||||||||||  |||||| | || || |||||||||||||||||| |||||| |||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttttaaaaaataaaat 9978496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 32990548 - 32990644
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  | |||||| || |||||||| |||| |||||||||||||| ||||    
T  32990548 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatactgagttttcaaaaaaaaaaa 32990644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 34723912 - 34724008
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||| ||||||||||||||  ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  34723912 tctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttttaaaaaaaaaaa 34724008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 7093504 - 7093575
Alignment:
Q  128 ccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||||||| ||  ||||||||||  |||||||||||| |||||||| ||||||    
T  7093504 ccgtaagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttttaaaaaaa 7093575  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 20566463 - 20566554
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| || || |||| ||||||||| ||||||||||||| ||| |||||||| || |||||||||||| |||||||| ||||||    
T  20566463 tctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagttttaaaaaaa 20566554  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 46714511 - 46714594
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||  || ||| |||||||||||||||||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttcaaa 46714594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 12824518 - 12824604
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||| ||||| | |||||| |||||||||||||| ||||  |||||||| || ||||||||||||| ||||||| ||||||    
T  12824518 ctttaaatggagctcctgcaagtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagttttaaaaaaa 12824604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 24273341 - 24273431
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||||||| || ||||||| ||| |||||| |||||||| ||||||||||  ||||||| ||||||||||||  |||||| ||||    
T  24273341 tttaaatggggctctcgcaagtgggtggtaggattgatcccatcagattagtcggtccttggatcagataccgagtttaaaaaaaaaaaaa 24273431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 23131496 - 23131424
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| ||||||||||| ||  |||||||| || || ||||||||||||||||||||||||| ||||    
T  23131496 aagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttcaaaaaaaaaaa 23131424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 52494625 - 52494685
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  52494625 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 4064997 - 4065064
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||||||| ||| |||| ||||||    
T  4064997 aagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaattttaaaaaaa 4065064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 33696363 - 33696272
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||| |||| |||||||||||| |||||||||  ||  |||||||  || |||||||||||| |||||||| ||||||    
T  33696363 tctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttttaaaaaaa 33696272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 40252402 - 40252493
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||| | |||| |||||||||||| |||||||| | ||| |||||||||||||| ||||| |||  ||||||| ||||||    
T  40252402 tctggctttaaatgggtcacccgcaagtgggcggtgagattggtctcctcaaattagtcggtttttagatcgaatattgagttttaaaaaaa 40252493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 7392053 - 7391960
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| |||| ||||||||||| | ||| || |||||||||||||||| |||| ||  ||||||||||| || ||| |||||||||||||||||||    
T  7392053 tttgctctggctttaaatgggacccccata-gtgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagttttcaaaa 7391960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 22625145 - 22625099
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtccc 154  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  22625145 tctgcctttaaatggggcccccgcaagtgggcggtgggattggtccc 22625099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 55158400 - 55158330
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||||||||||| ||  |||||||| ||||||||||||| |||||||||| |||||| |||||    
T  55158400 tgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttttaaaaaaaaaaat 55158330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 39288990 - 39289051
Alignment:
Q  138 gcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||| ||| |||||||||| |||| ||||||||||||  ||||||||||    
T  39288990 gcggtgggattggtcccttcagattagtcggtctttgcatcggataccgaagtttcaaaaaa 39289051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 43719152 - 43719075
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||||||||||||||||   ||  |||||||| || |||||||||||||||| ||||||||||| ||||    
T  43719152 cccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttcaaaaaaaaaaa 43719075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 23639761 - 23639821
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||| |||||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  23639761 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 23645419 - 23645479
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||| |||||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  23645419 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 25852352 - 25852424
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||  ||||||||||||| ||  ||||||||||| ||||| ||||||||||||||| |||||| ||||    
T  25852352 aagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagttttaaaaaaaaaaaa 25852424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 51535733 - 51535825
Alignment:
Q  108 tctgcctttaaatggggctccc-gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| ||| | ||||||||||||||||||||||| ||  |||||||| || || ||||||||||||| |||| ||||||    
T  51535733 tctggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttttaaaaaa 51535825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 27574431 - 27574522
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| |||||||||||| | |||||||| ||  |||| ||  || ||||||||||||| ||||||||||||||    
T  27574431 tctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttcaaaaaa 27574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 35229305 - 35229372
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||| ||||||||||||||||| ||  |||||||| || |||||||||||||||| |||| ||||||    
T  35229305 aagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 35229372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 30879254 - 30879153
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    |||| |||| ||||||| |||| ||| | |||||| ||||||||||||| || ||| |||| ||| || ||||||| |||||||| ||||||||||| ||    
T  30879254 tttgctctggctttaaaggggg-tcctgcaagtggacggtgggattggttccctcagattaatcgattcttggatcagataccgaattttcaaaaaaaaa 30879156  T
Q  203 aat 205  Q
    |||    
T  30879155 aat 30879153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 4912039 - 4912135
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| || || |||| ||||||| |||| ||||| ||||  |  |||||||| || ||||||| |||||||||||||||||||| ||||    
T  4912039 tctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttcaaaaaaaaaaa 4912135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 13017845 - 13017916
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||| |||||||||||||  ||  ||||||||||  ||||||| ||||||||||||||||||||    
T  13017845 cccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagttttcaaaaaa 13017916  T

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Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 13771566 - 13771482
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||| |||||||||| ||||||  | || |||||||||| |   ||||||||||| |||||||||||||||| ||||    
T  13771566 tctggctttaaacggggctcccgcaagtggatgatgagattggtcccctataattagtcggttcttggatcggataccgaatttt 13771482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 20527099 - 20527035
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||||||||||||||| ||||||||| | ||  |||||||| ||||||||||  |||||||||||    
T  20527099 cccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 21387550 - 21387475
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||||  ||||||| ||  |||||||| || |||||||||||||| ||||||| ||||| ||||    
T  21387550 cccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggataccaagttttccaaaaaaaaaa 21387475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 25969615 - 25969504
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||||| ||||  |||||| | |||| ||||||| ||| | |||||||||| ||||||||||||||||| ||  |||||||| || ||| |    
T  25969615 tttcggtggccaagtccatacagaactt-gctctggctttaaacgggcc-cccgtaagtgagcggtgggattggtccc-tcgaattagtcgattcttgaa 25969519  T
Q  177 tcggataccgagttt 191  Q
    |||||||| ||||||    
T  25969518 tcggatactgagttt 25969504  T

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Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 39343602 - 39343664
Alignment:
Q  137 ggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| |||||||||| ||| ||||||| ||  ||||||||||||| ||||||| ||||||    
T  39343602 ggcggtgtgattggtcccctcaaattagtctgtccttggatcggatactgagtttttaaaaaa 39343664  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 12710314 - 12710386
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||| |||| |||||||||| | ||| |||| |||||  ||||||||||||||||||||  |||||| ||||    
T  12710314 aagtgagcggagggattggtcacctcagattaatcggtccttggatcggataccgagtttaaaaaaaaaaaaa 12710386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 13716565 - 13716489
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcc 153  Q
    |||| |||| ||||| |||| ||||||||| | || |||||||  |||| | || ||||||||||||||||||||||    
T  13716565 tttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattggtcc 13716489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 17637911 - 17637840
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||  ||||||||| ||  |||||||| || ||| ||||||||||||||||| |||||| ||||    
T  17637911 aagtgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagttttaaaaaaaaaaaa 17637840  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 18875577 - 18875513
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    |||||||  ||||||||| |||| ||  |||||||  |||||||||| |||||||||||||||||    
T  18875577 aagtgggtagtgggattgatcccctcggattagtcaatttttggatcagataccgagttttcaaa 18875513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 24672342 - 24672298
Alignment:
Q  155 atcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||| || ||||||||||||||||||||| ||||||    
T  24672342 atcaaattagtcgattcttggatcggataccgagttttaaaaaaa 24672298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 37302624 - 37302684
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||| ||||||||||||| ||  |||||||| || ||| |||||||||||| ||||    
T  37302624 aagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

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Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 22120005 - 22120096
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  22120005 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 22120096  T

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Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 27312269 - 27312360
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| || || |||| ||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||||||    
T  27312269 tctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaaaa 27312360  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 40542994 - 40542903
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  40542994 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 40542903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 11997966 - 11998062
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||  |||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  11997966 tctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 11998062  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 17197034 - 17196938
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  17197034 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 17196938  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 654775 - 654700
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| |||| ||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  654775 gggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttcaaaa 654700  T

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Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 2751388 - 2751479
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| || |||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  2751388 tctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 2751479  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 21835268 - 21835359
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||| |||||||||||||||    
T  21835268 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttcaaaaaa 21835359  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 32849708 - 32849791
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||||||| ||| |||||||| || ||||||||||||||||||||    
T  32849708 tctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 3851874 - 3851971
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || ||||||||||||||||||||| |||||| |||||    
T  3851874 tctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttaaaaaaaaaaaat 3851971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 31197712 - 31197796
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| |||||||| || |||||||||||| |||||||||||||    
T  31197712 ctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttcaaaa 31197796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 23012592 - 23012501
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||| |||  ||||||||||||||||||||||| || ||||||||  ||  | |||||||||||||||||||||||||    
T  23012592 tctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttttcaaaaaa 23012501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 2344421 - 2344507
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| ||| | |||| ||||| ||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||||||||||    
T  2344421 ctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaaaa 2344507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 17279679 - 17279737
Alignment:
Q  139 cggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  17279679 cggtgggattggtcccctcaaattagtcggtctttggatcggataccgagttttcaaaa 17279737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 29861787 - 29861877
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| ||||||| ||||| |||| |||||||||||||||||| |||| ||  |||||||| || || ||||||||||||||||||||||||    
T  29861787 tctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttcaaaaa 29861877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 7275394 - 7275491
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| |||||||  |||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||  ||||| |||||    
T  7275394 tctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttttaaaaaaaaaat 7275491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 18044224 - 18044320
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||  ||||||| ||||| ||||||||| ||| |||||||| || ||||||||||||||||||||| |||||| ||||    
T  18044224 tctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 18044320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 23092213 - 23092309
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| || ||| |||||||||||||||| ||  |||||||| ||  ||||||||||||||||||||||||||| ||||    
T  23092213 tctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagttttcaaaaaaaaaaa 23092309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 42913597 - 42913501
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| |||||| |||||||||||||||| ||  |||||| | || || ||||||||||||||||||||||||| ||||    
T  42913597 tctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttcaaaaaaaaaaa 42913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 2103172 - 2103261
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||| ||  |||||||| ||  | |||||||||||||||||||||||||    
T  2103172 tctggctttaaatggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcat-gatcggataccgagttttcaaaaaa 2103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 22703603 - 22703694
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || || ||||||||||| |||||||||||||    
T  22703603 tctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttcaaaaaa 22703694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 28089937 - 28090027
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||| | |||| ||||||||| || |||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  28089937 tctggctttaaatgggcc-cccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 28090027  T

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Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 7175927 - 7175857
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||| ||||||||||||    
T  7175927 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttcaaaa 7175857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 16374116 - 16374202
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| ||| | |||| || ||| |||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  16374116 ctttaaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 16374202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 21574162 - 21574090
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| |||||||||| ||  ||||||||||  |||||||||||||||||||||||||||| ||||    
T  21574162 aagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaaaaaaaaa 21574090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 31274031 - 31274126
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| |||||||| | |||||||| ||| |||||||||| ||  |||||||| || ||||| |||||||||||||||||||||| ||||    
T  31274031 tctggctttaaacggggctcc-gcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttcaaaaaagaaaa 31274126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 31712962 - 31712902
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  31712962 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 41907597 - 41907502
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| | ||| |||| ||||||| |||||||||||||||  || |||||||| || ||||||||||||||||||||| |||||| ||||    
T  41907597 tctggctttaaacgtggcccccgcaagtgggtggtgggattggtcccc-cagattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 41907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 10091305 - 10091395
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||  |||| |||||||||||||||||| |||| ||  |||||||| || || |||| ||||||||||||||||||||    
T  10091305 tctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagttttcaaaaaa 10091395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 27009501 - 27009568
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||| |||||||||||||||| ||| |||||||| || |||||| |||||||||||||| ||||||    
T  27009501 aagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagttttaaaaaaa 27009568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 43785377 - 43785287
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| |||||  ||| |||||| ||||| |||||||||| |   |||||||| |||||||||||||||||||| |||||||||| ||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgagctttcaaaaaaaaaaa 43785287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 19421348 - 19421444
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||  ||||||||||||||||||||| | ||  |||||||| || ||| ||| ||||||||||||  |||||| ||||    
T  19421348 tctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagtttaaaaaaaaaaaaa 19421444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 22638405 - 22638488
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||| ||||||| |||||  ||| |||||||||||||||||| || | ||  |||||||| || ||||||||||||||||||||    
T  22638405 tctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 196
Target Start/End: Complemental strand, 23330854 - 23330735
Alignment:
Q  77 tttcggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttgga 176  Q
    ||||||||| ||||| ||||  || ||||| |||| ||| ||| ||| |  ||| |||||||||||  |||||||||| ||| |||||||  |  |||||    
T  23330854 tttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttgga 23330755  T
Q  177 tcggataccgagttttcaaa 196  Q
    ||||||||||||||||||||    
T  23330754 tcggataccgagttttcaaa 23330735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 21217893 - 21217831
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttca 194  Q
    |||||||||||||||||| |||| ||  |||||| | || |||||||||||||||||||||||    
T  21217893 aagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttca 21217831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 25333539 - 25333610
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||| |||||||||||||| ||  |||||||| || |||||||||| |||||||||| ||||||    
T  25333539 cccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagttttaaaaaaa 25333610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22696462 - 22696529
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||| |||||||||||  ||  ||||||||||  ||||||||||||||||||||| ||||||    
T  22696462 aagtaggcggcgggattggtcctctcggattagtcggtccttggatcggataccgagttttaaaaaaa 22696529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 28647110 - 28647177
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||||||||||| || ||  ||||||| ||  |||||||||||| |||||||| ||||||    
T  28647110 aagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttttaaaaaa 28647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 36772387 - 36772296
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| ||||  |||||||||||| ||| ||||  ||  |||||||| || || |||||||||||||||||| ||||||    
T  36772387 tctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttttaaaaaaa 36772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 47381032 - 47381098
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| | | ||||||||||  ||| ||||||||| ||||||| ||||||    
T  47381032 aagtgggcggtgggattggtcccttga-attagtcggtccttgaatcggatactgagttttaaaaaaa 47381098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 8943466 - 8943388
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| |||||||||||| |||||||||| |   |||||||| || ||||||||||||| || |||| |||||| |||||    
T  8943466 cccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatactgaattttaaaaaaaaaaaat 8943388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  137 ggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtt 190  Q
    |||||||||||||||||| ||   |||||||||| || ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 44933692 - 44933737
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||||| | |||||||||||||||||||||||| |||||| |||||    
T  44933692 attagttgatttttggatcggataccgagttttgaaaaaaaaaaat 44933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 13332466 - 13332422
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||| || ||||||| |||||||||||||||||||| ||||    
T  13332466 attagtcgattcttggatcagataccgagttttcaaaaaaaaaaa 13332422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 27704137 - 27704209
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| |||| ||||| |||| ||| |||||||| || ||| ||| ||||||||||||| ||||||    
T  27704137 cccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagttttaaaaaaa 27704209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 39145712 - 39145640
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| |||||||||||||||| ||  |||||||| || ||| ||| |||||| |||||| |||||| ||||    
T  39145712 aagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttttaaaaaaaaaaaa 39145640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 654230 - 654139
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  654230 tctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttttaaaaaa 654139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 3222719 - 3222624
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  3222719 tctgtctttaaacggggc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 3222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 21982404 - 21982309
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  21982404 tctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 21982309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 34147459 - 34147555
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  34147459 tctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 34147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 34160075 - 34160171
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  34160075 tctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 34160171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 9239093 - 9239184
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||  |||||| ||||    
T  9239093 ctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaaaaaaaaa 9239184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 15360182 - 15360091
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| || |||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  15360182 tctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 15360091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 17081138 - 17081042
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||| ||  || ||| | || |||||||| ||||||||||||||||||| ||||    
T  17081138 tctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttttcaaaaaaaaaaa 17081042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 21148594 - 21148499
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||||||||||||||||||| ||||    
T  21148594 tctgactttaaacggggc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaaaaaaaaa 21148499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 9844047 - 9844147
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    |||||||| ||||||| ||||| |||  |||||||||||| |||||||||| ||  |||||||| || |||||||||||| |||||||||| |||| |||    
T  9844047 ttgttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttcataaaataaa 9844146  T
Q  204 a 204  Q
    |    
T  9844147 a 9844147  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 1345048 - 1345139
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| |||||| |||||||||||||||| |   |||||||| || ||||||||||||||||||||||||||||    
T  1345048 tctggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaaaa 1345139  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 14213000 - 14213091
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||  |||| ||||||| ||||||||||||||  ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  14213000 ctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 14213091  T

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Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 9208370 - 9208456
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||| |||| ||||||||||||||||||||| | ||| | |||||| || |||||||  |||||||||||| ||||||    
T  9208370 ctttaaatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagttttaaaaaaa 9208456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 21903704 - 21903607
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggt-cccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| || | ||||||||||||||| |||| ||| ||| |||||||| || ||||||||||| | |||||||||||||| ||||    
T  21903704 tctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgcagagttttcaaaaaagaaaa 21903607  T

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Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 5360131 - 5360059
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||||| ||  |||||||| || || |||||||||||||||||| |||||| ||||    
T  5360131 aagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagttttgaaaaaaaaaaa 5360059  T

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Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 11448984 - 11449068
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||| ||||||||    
T  11448984 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 28672204 - 28672271
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  |||||||| || ||||||| ||||||||||||| ||||||    
T  28672204 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttttaaaaaa 28672271  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 11841020 - 11841109
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| ||||| ||| ||||||| |||||||||| ||||| ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  11841020 tttaaacggggc-cccataagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttttaaaaaataaaa 11841109  T

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Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 17149535 - 17149449
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||| |||| |||||  |||||||||||||||| ||  ||||||||||  ||| ||| ||||||||||| ||||||||    
T  17149535 ctttaaatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagttgtcaaaaaa 17149449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 11007291 - 11007368
Alignment:
Q  121 ggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    ||||| |||| ||||||||||||||||||| ||| ||  |||||||| || || ||||||||||| ||||||||||||    
T  11007291 ggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttcaaaaa 11007368  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 9690698 - 9690626
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||| |||||||||||||||  ||  |||||||| || ||||||||||||||||||||| |||||| ||||    
T  9690698 aagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 9690626  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 33499612 - 33499679
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  ||||||| |||  |||| ||||||||||||||| ||||||    
T  33499612 aagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagttttaaaaaaa 33499679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 7491699 - 7491654
Alignment:
Q  159 tattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||    
T  7491699 tattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 7491654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 14504160 - 14504075
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||  |||| |||||||||||||||||| |||  ||  |||||||| |  ||| ||||||||||||||||| ||||||    
T  14504160 tttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttttaaaaaa 14504075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 15730583 - 15730483
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    |||||||| ||||||| | ||| |||  | ||||||||||||||||||| | ||  |||||||| || || ||||||||| |||||||| |||||| |||    
T  15730583 ttgttctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttttaaaaaaaaaaa 15730484  T
Q  204 a 204  Q
    |    
T  15730483 a 15730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 27866270 - 27866217
Alignment:
Q  125 ctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatc 178  Q
    |||||| ||||||||||||||||| ||||| ||  |||||||| ||||||||||    
T  27866270 ctcccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatc 27866217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 15038077 - 15038168
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| || || |||| ||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||| ||||    
T  15038077 ctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 15038168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 28668991 - 28669082
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||| |||  ||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||| ||||    
T  28668991 ctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagttttcaaaaaaaaaaa 28669082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 35171913 - 35172009
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||||||||||||||||||| ||||    
T  35171913 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaaaaaaaaa 35172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 41329955 - 41330051
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||  |||||||||||| |||||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||| ||||    
T  41329955 tctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttttaaaaaaaaaaaa 41330051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 3943853 - 3943944
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| |||||||||| ||||||| ||||||||||||||| |   ||||||||||| |||||||||||||| |||||||||||||    
T  3943853 tctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttttcaaaaaa 3943944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 18692097 - 18692164
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||    
T  18692097 aagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttcaaaaaa 18692164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 44946137 - 44946046
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  44946137 tctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 44946046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 2140551 - 2140479
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  2140551 cccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttcaaaaaa 2140479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 44610157 - 44610236
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||||||| || | ||||||||||||||||||||||||||  ||||||||||| ||||| || ||||||||||||    
T  44610157 ctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 24196134 - 24196212
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||||||||||||||||||| ||  |||||||| ||||| ||| ||||||||||||||||||||| |||||    
T  24196134 cccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttcaaaaaataaaat 24196212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 28194209 - 28194127
Alignment:
Q  121 ggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    ||||| |||| |||| |||||||||||||||| | ||| ||||||||||  ||||||||||||||||||||||||||| ||||    
T  28194209 ggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttcaaaaaccaaa 28194127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 11941294 - 11941205
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||    
T  11941294 tctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 11941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 14486962 - 14487027
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    ||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||||||||    
T  14486962 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 14487027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 43374395 - 43374318
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||| ||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  43374395 cccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 43374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 8192412 - 8192340
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||| ||| ||  ||||||||||  |||||||||||||||||||||||||||| ||||    
T  8192412 aagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttcaaaaaaaaaaa 8192340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 31778144 - 31778228
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||||||||| |||| |||||| ||||| |||||||||  ||| ||||||| ||| |||||||||||||||||||||    
T  31778144 tctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 33827633 - 33827561
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||||| |   |||||||| || |||||||||||||||||||||||||||| ||||    
T  33827633 aagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 33827561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 5394125 - 5394220
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| |||| |||||||||||||  ||| ||||||||||||||||||||||  ||  ||||||||||  || ||||||||||||| ||||||||||    
T  5394125 tttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaattttcaaaaa 5394220  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 30466914 - 30466823
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||||  |||| |||| |||||||| |||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  30466914 tctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttttaaaaaaa 30466823  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 34516474 - 34516407
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||||||||||| ||  |||||||| || |||||||||||||| |||||||||||||    
T  34516474 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttcaaaaaa 34516407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 18976520 - 18976442
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||| ||||| ||||| |||||    
T  18976520 cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttcgaaaaaaaaaat 18976442  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 19054158 - 19054235
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||||||||||||  ||  |||||||| || ||||||| |||||||||||||||||||| ||||    
T  19054158 cccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttcaaaaaaaaaaa 19054235  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 8259006 - 8259106
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    |||||||| ||||||  ||||| |||| |||| |||||||||||| || || ||  |||||||| || ||||||||||||| |||||||||||||| |||    
T  8259006 ttgttctggctttaatcggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttcaaaaaaaaaa 8259105  T
Q  204 a 204  Q
    |    
T  8259106 a 8259106  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 13089011 - 13089083
Alignment:
Q  126 tcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    ||||| |||||||||||| |||||||||  ||| |||| ||||||||||| |||||||||||||||| |||||    
T  13089011 tcccgcaagtgggcggtgagattggtcctctcagattattcggtttttgggtcggataccgagtttttaaaaa 13089083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 25293291 - 25293363
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||||| ||||||||||||| ||  |||||||| || ||||||||||||||||||||| ||||||    
T  25293291 cccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 25293363  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 36242396 - 36242300
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||  |||| ||||||||||||||||||||||| ||  |||| ||| || |||||||||||||| | ||||||||||| ||||    
T  36242396 tctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccaaattttcaaaaaaaaaaa 36242300  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 1845103 - 1845036
Alignment:
Q  138 gcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaat 205  Q
    ||||||| ||||||||| ||| |||||||| || |||| ||||||||||||||||||||||| |||||    
T  1845103 gcggtggaattggtcccctcaaattagtcgattcttggctcggataccgagttttcaaaaaataaaat 1845036  T

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Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 6714374 - 6714295
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||| ||| |||||| |||||| ||||| |||||||||| ||| |||||||| || |||||| ||||||||||||||    
T  6714374 ctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

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Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 14946915 - 14946975
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||| |||||||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  14946915 aagtaggcagtgggattggtcccctcagattagtcagtttttggatcggagaccgagtttt 14946975  T

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Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 44929911 - 44929839
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||||| |||||||||||||||| |   |||||||| || ||||||||||||||||||||| ||||||    
T  44929911 cccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttttaaaaaaa 44929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 27269411 - 27269344
Alignment:
Q  125 ctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||| |||||||||||||||||| |||| ||  |||||||| || |||||| ||||||||||||||    
T  27269411 ctcccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 39957895 - 39957962
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| |||||||||| || ||  |||||||| || |||||| |||||||||||||||||||||    
T  39957895 aagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttcaaaaaa 39957962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 41314122 - 41314192
Alignment:
Q  126 tcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    ||||| |||||| |||||||||||||||| ||| |||| ||| || || ||||||||||| ||||||||||    
T  41314122 tcccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttcaaa 41314192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 714214 - 714118
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||| ||||||| || || |||| || ||||||||||| || ||||| ||| |||||||| || || ||| |||||||||||||| ||||||    
T  714214 tttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagttttaaaaaaa 714118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 9401045 - 9400949
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||  |||| |||| |||||||| |||||||||||  | | | |||||||| || ||||||||||||| ||||||| |||||| ||||    
T  9401045 tctggctttaaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagttttaaaaaaaaaaaa 9400949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 13266603 - 13266686
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||| ||||| |||| |||||||   ||||||||||||| ||| |||||||| || |||||||||||| ||||||||    
T  13266603 tctggctttaaacggggc-cccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 36390652 - 36390569
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||||||| | |||| ||||||||||||||||||||||| ||  || ||||| |  ||| |||||||||||||||||    
T  36390652 tctgactttaaatgggacccccgcaagtgggcggtgggattggtccc-tcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 27290739 - 27290778
Alignment:
Q  160 attagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  27290739 attagtcgattcttggatcggataccgagttttcaaaaaa 27290778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 9641155 - 9641208
Alignment:
Q  129 cgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggata 183  Q
    ||||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  9641155 cgtaagtggacggtgagattggtccc-tcagattagtcggttcttggatcggata 9641208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 13599390 - 13599320
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| |||||| ||||| ||||| |||| |||||||||| |||  |||||||||||||||| |||| ||||    
T  13599390 cccgcaagtggacggtgagattgatcccctcatattagtgggtcattggatcggataccgaatttttaaaa 13599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 13747560 - 13747494
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||| |||||||||||| ||| ||| ||| |||| |  |||||||||||||||| ||||||||||    
T  13747560 aagtggacggtgggattgggcccctcagatttgtcgatccttggatcggataccgaattttcaaaaa 13747494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 19174894 - 19174964
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    ||||||| ||||||||||||||| |||| ||  |||| |||||  |||||||||||||||| |||| ||||    
T  19174894 cccgtaaatgggcggtgggattgatcccctcggattaatcggtccttggatcggataccgaattttaaaaa 19174964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 17324902 - 17324966
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    ||||||||||||||||| ||||| ||| |||||||| || || ||||||||| |||||||| ||||    
T  17324902 aagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagttttaaaaa 17324966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1501511 - 1501452
Alignment:
Q  144 ggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||| ||  |||||||| || ||| |||||||||||||||||||||||| ||||    
T  1501511 ggattggtcccctcggattagtcgattcttg-atcggataccgagttttcaaaaaaaaaaa 1501452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 19849946 - 19850041
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||||||  |||| |||| |||||||||||| |||||||||  ||| |||| ||| || ||||||| ||||| ||||||| |||||| ||||    
T  19849946 tctggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatc-gatactgagttttaaaaaaaaaaaa 19850041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 32306950 - 32306918
Alignment:
Q  172 ttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||||||||||||||||||||| ||||    
T  32306950 ttggatcggataccgagttttcaaaaaaaaaaa 32306918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 32526210 - 32526142
Alignment:
Q  114 tttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggat 182  Q
    |||||||||||  |||| ||||| |||||| ||||| |||||||| ||||||||||  || ||||||||    
T  32526210 tttaaatggggtgcccgcaagtgagcggtgagattgatcccatcagattagtcggtccttagatcggat 32526142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 39201 - 39295
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||| |||||||||||||||||||    
T  39201 ttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaaa 39295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 30677294 - 30677379
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    ||||||||||| | |||| ||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||||    
T  30677294 ctttaaatgggacccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagttttcaaaaa 30677379  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 24122136 - 24122220
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  24122136 tctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 32729657 - 32729753
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||  |||| |||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||||||| ||||    
T  32729657 tctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttcaaaaaaaaaaa 32729753  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 4621321 - 4621230
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||  |||| ||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  4621321 tctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 4621230  T

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Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 24674506 - 24674597
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| || ||||||||| || |||||||||||||||| |||| ||||||    
T  24674506 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattttaaaaaaa 24674597  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 7766811 - 7766720
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||| |||||||| |||||||||||||||    
T  7766811 tctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttcaaaaaa 7766720  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 15059486 - 15059395
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||  |||| |||||||||||| |||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  15059486 tctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaaaa 15059395  T

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Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 8254873 - 8254740
Alignment:
Q  71 tgtcactttcggtggac-aagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggt 169  Q
    ||||| ||||||||| | |||||||||  |||||| | |||| ||||||| ||||| |||| |||||||||||||||||| |||| |   |||||||| |    
T  8254873 tgtcaatttcggtgggctaagttcatacagaactt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgat 8254775  T
Q  170 ttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    | ||| |||||||||||||||||||||||| ||||    
T  8254774 tcttgaatcggataccgagttttcaaaaaaaaaaa 8254740  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 36155946 - 36155876
Alignment:
Q  134 gtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||| |||||| ||||    
T  36155946 gtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttttaaaaaaaaaaaa 36155876  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 52135263 - 52135329
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  52135263 aagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagtttttaaaaa 52135329  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 33905599 - 33905498
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    ||||||||| ||||||| |||||  |||||||||| ||||||||||| |||| ||| |||  ||| || || ||||||||||||||||||||||||| ||    
T  33905599 tttgttctggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagttttcaaaaaaaaa 33905500  T
Q  203 aa 204  Q
    ||    
T  33905499 aa 33905498  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 7578522 - 7578613
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| | || ||||||| |||||||||||| || ||  |||||| | |||||||||||||||||||||||||||||||    
T  7578522 tctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttcaaaaaa 7578613  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 27159172 - 27159285
Alignment:
Q  81 ggtggacaagttcatatggaactttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcgg 180  Q
    |||||| ||||||||   ||||||||||| |  |||||| ||| | |||| |||||| |||||||||||||||| ||| |||||||| | ||||||||||    
T  27159172 ggtggataagttcatgcagaactttgttcgggttttaaacgggcc-cccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcgg 27159270  T
Q  181 ataccgagttttcaa 195  Q
    ||| |||||||||||    
T  27159271 atatcgagttttcaa 27159285  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 27454922 - 27454852
Alignment:
Q  134 gtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||| ||  |||||||| || |||||||||||||| ||||||||||||| ||||    
T  27454922 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttcaaaaaaaaaaa 27454852  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 17935877 - 17935965
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||| |||| ||||||| ||||| |||| ||||||||| ||||||||||||  ||  |||||||| || ||||||||||||||||||||    
T  17935877 tttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 18533812 - 18533724
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||||| ||||||| ||||| || | |||||||| |||||||||||||| |||||||| ||| || || ||||||||||| ||||||    
T  18533812 ttgttctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 22909984 - 22910080
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| || || |||| ||||||||||||||||| ||||| ||  |||||||| |  || ||||||||||||||||||||||||| ||||    
T  22909984 tctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttcaaaaaaaaaaa 22910080  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 37351513 - 37351441
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||  |||||| ||||    
T  37351513 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttaaaaaaaaaaaaa 37351441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 23734231 - 23734326
Alignment:
Q  110 tgcctttaaatggggctccc-gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||| ||||| ||| | ||||||||||||  ||||||||| ||| |||||||| || ||| |||||||||| ||||||||||||| ||||    
T  23734231 tgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttcaaaaaaaaaaa 23734326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 23741423 - 23741518
Alignment:
Q  110 tgcctttaaatggggctccc-gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||||| ||||| ||| | ||||||||||||  ||||||||| ||| |||||||| || ||| |||||||||| ||||||||||||| ||||    
T  23741423 tgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttcaaaaaaaaaaa 23741518  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 34778457 - 34778548
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| |   |||||||| || ||||||||||||||||||||  |||||| ||||    
T  34778457 ctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagtttaaaaaaaaaaaaa 34778548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 46607942 - 46608012
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    |||| |||||||||||||||||| |||| ||  ||||||||||  |||||||||||| |||||||||||||    
T  46607942 cccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttttcaaaa 46608012  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 48699877 - 48699959
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaa 195  Q
    ||||||| || || |||| |||||||||||||||||| |||| ||  |||||||| || |||||||||||| |||||||||||    
T  48699877 ctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttcaa 48699959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 168310 - 168410
Alignment:
Q  104 ttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaa 203  Q
    |||||||| ||||||| ||| ||||||  ||||| |||||||||||||||| ||  ||||||  ||| || || |||||||| ||||||||||||| |||    
T  168310 ttgttctgactttaaacgggactcccgctagtggccggtgggattggtcccctcggattagttagttcttagaccggataccaagttttcaaaaaaaaaa 168409  T
Q  204 a 204  Q
    |    
T  168410 a 168410  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 26513208 - 26513136
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||||||||||| ||||||| ||  |||||||| || |||||||| |||||||||||| |||||| ||||    
T  26513208 aagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttttaaaaaaaaaaaa 26513136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 7197307 - 7197240
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||| |||||||||| ||  |||||||| ||  |||||||||||||||||||| ||||||    
T  7197307 aagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttttaaaaaa 7197240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 35138120 - 35138191
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaa 198  Q
    |||| |||||||||||||||||| | || ||  ||||||||||  ||||||||||||||||||||| |||||    
T  35138120 cccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagttttaaaaaa 35138191  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 1379024 - 1379101
Alignment:
Q  122 gggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| |||| |||||| ||||| |||||||||| ||| |||||||| || || |||||||||||||| ||| ||||||    
T  1379024 gggcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgagcttttaaaaaa 1379101  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 1486552 - 1486617
Alignment:
Q  127 cccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||| |||||| ||||||||| |||||| ||  ||||||||||  |||||||||||||||||||||    
T  1486552 cccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 14603947 - 14604000
Alignment:
Q  146 attggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 14604000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 9926203 - 9926139
Alignment:
Q  135 tgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||||| |||| | | ||||||||||  || |||||||||||||||||| ||||||    
T  9926203 tgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagttttaaaaaaa 9926139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 23041659 - 23041719
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||| | |||||||||||||| ||  |||||||| || |||||||||||||||||||||    
T  23041659 aagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 36921604 - 36921513
Alignment:
Q  100 aactttgttctgcctttaaatggggctccc-gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    ||||||| |||| ||||||||||| | ||| | |||||| |||||||||| ||||| ||| |||||||| || ||| ||||||||||||||||    
T  36921604 aactttgatctggctttaaatgggaccccccgcaagtggacggtgggattagtccc-tcaaattagtcgattattgaatcggataccgagttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 30043528 - 30043473
Alignment:
Q  144 ggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||| || |||||||||| ||| ||||| ||||||||| |||||||||||||    
T  30043528 ggattggttccctcatattagttggtctttggttcggataccaagttttcaaaaaa 30043473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 45331701 - 45331614
Alignment:
Q  113 ctttaaatggggctccc-gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||| ||||||||| | |||||| ||||||||||  |||| ||| |||| ||| || ||| ||||||||||||||||| ||||||    
T  45331701 ctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagttttaaaaaaa 45331614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 45859122 - 45859031
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||||||  |||| |||| ||||||| ||| ||||||||||| ||  |||||| | || |||||||||||||||| |||| |||||| ||||    
T  45859122 ctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggataccgaatttttaaaaaaaaaaa 45859031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 88499 - 88577
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttt 191  Q
    |||||||||||||||| | |||||||||||| ||||||| |  ||| |||||||| | | || |||||||| |||||||    
T  88499 ctttaaatggggctccagcaagtgggcggtgtgattggttctctcagattagtcgatctatgaatcggatatcgagttt 88577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 8077760 - 8077841
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtt 190  Q
    |||| |||||||  |||| |||| ||||||||||||||||||||||| ||  |||| ||| || |||||||||| ||||||||    
T  8077760 tctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc-gattaatcgattattggatcggagaccgagtt 8077841  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 16539742 - 16539804
Alignment:
Q  130 gtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    ||||||||| ||||||||||||||| ||| |||||||| |  ||| |||||||||||| ||||    
T  16539742 gtaagtgggtggtgggattggtcccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 2272452 - 2272553
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaa 202  Q
    |||| |||| ||||||| ||||| ||   ||| ||||||| |||||| |||||||  |||||||| || |  |||||||||| |||||||||||||| ||    
T  2272452 tttgctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgattctaagatcggatactgagttttcaaaaaaaaa 2272551  T
Q  203 aa 204  Q
    ||    
T  2272552 aa 2272553  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 5315478 - 5315535
Alignment:
Q  142 tgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||||||| ||  || ||||| || ||||||||||||||||||||| ||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagttttaaaaaaa 5315535  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 9500415 - 9500355
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagtttt 192  Q
    |||||||||||| |||||||| | ||  |||||||| || |||||||||||| ||||||||    
T  9500415 aagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 14667585 - 14667489
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    ||||||||| |||||||||||||  | | ||||||  ||||||||||| |||  |  |||| |||||| |||| ||||| |||||||||| ||||||    
T  14667585 tttgttctgactttaaatggggcctctgcaagtggatggtgggattggacccggctaattactcggttgttgggtcggacaccgagttttaaaaaaa 14667489  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 18646961 - 18647045
Alignment:
Q  103 tttgttctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccga 187  Q
    |||| |||| ||||||| || || || |||||||||||||| ||||| |||| ||  |||||||| || ||| ||||||||||||    
T  18646961 tttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccga 18647045  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 52135141 - 52135181
Alignment:
Q  17 tctaatggttgatttgggatcttggagtttgatcatctcaa 57  Q
    |||| ||||||| |||||||||||||||||| |||||||||    
T  52135141 tctagtggttgacttgggatcttggagtttgctcatctcaa 52135181  T

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Target: scaffold0070 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 40438 - 40533
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||||||||||||||| ||||    
T  40438 tctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttcaaaaaaaaaaa 40533  T

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Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 66867 - 66963
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||| |||||| ||||    
T  66867 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttaaaaaaaaaaaa 66963  T

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Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 97450 - 97354
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||| | |||| ||||||||||||||||||||||  || |||||||||||||||||| ||||||||||||||| |||||| ||||    
T  97450 tctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagttttaaaaaaaaaaaa 97354  T

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Target: scaffold0019 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 161922 - 162018
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| |||| |||||||| |||| ||||||||||||||||||||||| ||  |||||||| || ||||||| |||||||||||||||||||| ||||    
T  161922 tctggcttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaaaaaaaaa 162018  T

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Target: scaffold0576 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 5166 - 5075
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| || |||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  5166 tctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaaaa 5075  T

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Target: scaffold0366 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 9383 - 9288
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| |||||| |||||||||||||||| ||  |||||||| || || ||||||||||||||||||||||||| ||||    
T  9383 tctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttttcaaaaaaaaaaa 9288  T

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Target: scaffold0366; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 12084 - 11989
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcgg-ataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||  |||||| |||||||||||||||| ||  |||||||  || ||| ||||| ||||||||||||||||||| ||||    
T  12084 tctggctttaaatggggc-cccacaagtggacggtgggattggtcccctcgaattagtcaattcttg-atcgggataccgagttttcaaaaaaaaaaa 11989  T

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Target: scaffold0217 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 7393 - 7297
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||| |||||| |||||| ||||    
T  7393 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttaaaaaaaaaaaa 7297  T

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Target: scaffold0623 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 1140 - 1045
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||| |||||| |||||||||||||||| ||  |||||||| || || |||||||||||||||||| |||||| ||||    
T  1140 tctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttttaaaaaaaaaaa 1045  T

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Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 32401 - 32496
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||| ||| |||| ||||||| ||||||||||||||| ||  |||||||| || || ||||||||||||||||||||||||| ||||    
T  32401 tctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaaaaaaaaa 32496  T

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Target: scaffold1175 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 2510 - 2419
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| ||||||||||||||||||||||| ||  ||||||| ||  ||| ||||||||||||||||| ||||||    
T  2510 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttttaaaaaaa 2419  T

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Target: scaffold0328 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 13126 - 13035
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    ||||||| ||||| |||| |||||| ||||||||||| |||| ||| |||||| | || ||||||||||||||||||||| |||||| ||||    
T  13126 ctttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagttttaaaaaaaaaaaa 13035  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 52955 - 52864
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||| ||||||| ||||| |||| | ||||||||| ||||||||||  ||  |||||||| || ||| ||||||||||||||||||||||||    
T  52955 tctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttcaaaaaa 52864  T

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Target: scaffold0459 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 10777 - 10683
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||||||||| |||  |||||| |||||||||||||||| ||  |||||||  || ||| |||||||||||||||||||||||| ||||    
T  10777 tctggctttaaatggggc-cccacaagtggacggtgggattggtcccctcgaattagtcaattcttg-atcggataccgagttttcaaaaaaaaaaa 10683  T

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Target: scaffold0160 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 29194 - 29136
Alignment:
Q  141 gtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaa 199  Q
    |||||||||||||| ||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  29194 gtgggattggtcccctcagattagtcagtccttggatcggataccgagttttaaaaaaa 29136  T

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Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 8511 - 8446
Alignment:
Q  132 aagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaa 197  Q
    ||||||||||||||||||||||  ||  |||||||| || || |||||||||||||||||| ||||    
T  8511 aagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttttaaaa 8446  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 41728 - 41633
Alignment:
Q  108 tctgcctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaaaaacaaaa 204  Q
    |||| ||||||| ||||| || | ||||||||  ||||||||||||| ||  |||||||| || ||| ||||||||| |||||||||||||| ||||    
T  41728 tctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattcttg-atcggatacagagttttcaaaaaaaaaaa 41633  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 11499 - 11416
Alignment:
Q  113 ctttaaatggggctcccgtaagtgggcggtgggattggtcccatcatattagtcggtttttggatcggataccgagttttcaaa 196  Q
    ||||||||||||  |||| ||||||  | |||||||| |||| ||| |||||| |||  |||||||||||||| ||||||||||    
T  11499 ctttaaatggggtccccgcaagtggaagatgggattgatcccctcaaattagttggtccttggatcggataccaagttttcaaa 11416  T

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