View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6890_low_7 (Length: 500)

Name: NF6890_low_7
Description: NF6890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6890_low_7
NF6890_low_7
[»] chr6 (19 HSPs)
chr6 (386-500)||(1605731-1605845)
chr6 (386-500)||(13757360-13757474)
chr6 (386-500)||(8626635-8626749)
chr6 (386-500)||(15064705-15064819)
chr6 (386-500)||(8235778-8235892)
chr6 (386-500)||(4129580-4129693)
chr6 (386-500)||(7761453-7761567)
chr6 (386-500)||(29260345-29260459)
chr6 (386-500)||(17942596-17942710)
chr6 (386-500)||(31559748-31559862)
chr6 (387-500)||(30734494-30734607)
chr6 (386-500)||(20398248-20398362)
chr6 (386-500)||(26860917-26861031)
chr6 (321-369)||(27580340-27580388)
chr6 (323-369)||(27316743-27316789)
chr6 (431-500)||(847831-847900)
chr6 (388-500)||(3798252-3798364)
chr6 (386-484)||(1814762-1814860)
chr6 (441-482)||(879309-879350)
[»] chr4 (27 HSPs)
chr4 (386-500)||(22321278-22321392)
chr4 (386-500)||(21310574-21310688)
chr4 (386-500)||(40122497-40122611)
chr4 (386-500)||(12071713-12071827)
chr4 (386-500)||(14261197-14261311)
chr4 (386-500)||(24706257-24706371)
chr4 (386-500)||(25704804-25704918)
chr4 (386-500)||(44568990-44569104)
chr4 (386-500)||(50768015-50768129)
chr4 (386-500)||(21661545-21661659)
chr4 (386-500)||(21670309-21670423)
chr4 (386-500)||(20249024-20249138)
chr4 (386-500)||(21064914-21065028)
chr4 (392-500)||(31892385-31892493)
chr4 (393-500)||(19692875-19692982)
chr4 (393-500)||(19703460-19703567)
chr4 (386-484)||(18507276-18507374)
chr4 (387-470)||(50839042-50839125)
chr4 (386-489)||(6128959-6129062)
chr4 (386-489)||(32543643-32543746)
chr4 (448-500)||(34324655-34324707)
chr4 (405-498)||(48652379-48652472)
chr4 (435-464)||(1615226-1615255)
chr4 (435-464)||(1615278-1615307)
chr4 (435-500)||(30939197-30939262)
chr4 (435-500)||(53691791-53691856)
chr4 (405-469)||(20714349-20714413)
[»] chr2 (21 HSPs)
chr2 (386-500)||(23366942-23367056)
chr2 (386-500)||(22388148-22388262)
chr2 (386-500)||(3519060-3519174)
chr2 (386-500)||(1102654-1102768)
chr2 (386-500)||(37673753-37673867)
chr2 (386-500)||(39938323-39938437)
chr2 (386-500)||(1646440-1646554)
chr2 (386-500)||(12969750-12969864)
chr2 (386-489)||(40756921-40757024)
chr2 (386-500)||(39561905-39562014)
chr2 (420-500)||(28110139-28110219)
chr2 (416-499)||(4917915-4917998)
chr2 (386-485)||(36447426-36447525)
chr2 (386-500)||(37284529-37284641)
chr2 (413-469)||(19976512-19976568)
chr2 (411-469)||(32838964-32839022)
chr2 (405-464)||(14779964-14780023)
chr2 (437-500)||(28401396-28401459)
chr2 (435-489)||(13753994-13754048)
chr2 (406-500)||(34242127-34242221)
chr2 (435-500)||(43077331-43077396)
[»] chr8 (23 HSPs)
chr8 (386-500)||(7147066-7147180)
chr8 (386-500)||(40058313-40058427)
chr8 (386-500)||(40918741-40918855)
chr8 (386-500)||(2539940-2540054)
chr8 (386-500)||(3585604-3585718)
chr8 (386-500)||(30999534-30999648)
chr8 (386-500)||(37345724-37345838)
chr8 (386-500)||(43275409-43275523)
chr8 (386-500)||(11174233-11174347)
chr8 (386-500)||(11646335-11646449)
chr8 (386-500)||(36068233-36068347)
chr8 (386-498)||(27035150-27035262)
chr8 (391-500)||(20546308-20546417)
chr8 (394-500)||(27563885-27563991)
chr8 (386-500)||(35866766-35866880)
chr8 (387-500)||(28568071-28568184)
chr8 (387-500)||(28575664-28575777)
chr8 (405-500)||(26628845-26628940)
chr8 (405-489)||(10180897-10180981)
chr8 (386-469)||(45400780-45400863)
chr8 (412-484)||(13880991-13881063)
chr8 (393-500)||(28562574-28562681)
chr8 (393-489)||(30906706-30906802)
[»] chr7 (18 HSPs)
chr7 (386-500)||(36453134-36453248)
chr7 (386-500)||(27813964-27814078)
chr7 (387-500)||(10981661-10981774)
chr7 (386-500)||(25614363-25614477)
chr7 (386-500)||(47110603-47110717)
chr7 (386-500)||(40349115-40349228)
chr7 (405-500)||(27941013-27941108)
chr7 (387-500)||(16662246-16662359)
chr7 (387-500)||(17636606-17636719)
chr7 (411-500)||(3091666-3091755)
chr7 (386-481)||(16360549-16360643)
chr7 (411-500)||(24456800-24456889)
chr7 (441-491)||(6737252-6737302)
chr7 (434-500)||(8380091-8380157)
chr7 (387-465)||(28200488-28200566)
chr7 (435-500)||(35746783-35746848)
chr7 (435-500)||(46563262-46563327)
chr7 (441-477)||(31229948-31229984)
[»] chr5 (23 HSPs)
chr5 (386-500)||(40886620-40886734)
chr5 (386-500)||(12806863-12806977)
chr5 (386-500)||(30720502-30720616)
chr5 (386-500)||(36561109-36561223)
chr5 (386-500)||(10285068-10285181)
chr5 (386-500)||(25773802-25773916)
chr5 (386-500)||(37900633-37900747)
chr5 (386-500)||(16983410-16983524)
chr5 (386-500)||(23097734-23097848)
chr5 (386-500)||(25683239-25683353)
chr5 (386-485)||(734349-734448)
chr5 (388-500)||(39071035-39071147)
chr5 (386-500)||(11319709-11319823)
chr5 (395-489)||(30402981-30403075)
chr5 (431-500)||(11797699-11797768)
chr5 (387-489)||(16054275-16054377)
chr5 (407-485)||(11795314-11795392)
chr5 (439-500)||(7277486-7277547)
chr5 (405-486)||(26168075-26168156)
chr5 (386-485)||(1056635-1056732)
chr5 (441-490)||(12305687-12305736)
chr5 (435-500)||(25785928-25785993)
chr5 (413-469)||(15629320-15629376)
[»] chr3 (27 HSPs)
chr3 (386-500)||(46694120-46694234)
chr3 (386-500)||(13364996-13365110)
chr3 (386-500)||(23087941-23088055)
chr3 (386-500)||(29375285-29375399)
chr3 (386-500)||(36881433-36881547)
chr3 (386-500)||(3383229-3383343)
chr3 (386-500)||(19241678-19241792)
chr3 (387-500)||(199008-199121)
chr3 (386-500)||(13703365-13703479)
chr3 (391-500)||(43750289-43750398)
chr3 (386-485)||(48820508-48820607)
chr3 (399-500)||(31873886-31873986)
chr3 (386-489)||(32834999-32835102)
chr3 (386-500)||(18355878-18355992)
chr3 (388-500)||(48963272-48963384)
chr3 (387-485)||(48436392-48436490)
chr3 (387-489)||(54086716-54086818)
chr3 (393-461)||(26783661-26783729)
chr3 (413-488)||(27707026-27707101)
chr3 (398-489)||(6901725-6901816)
chr3 (431-484)||(52009105-52009158)
chr3 (411-482)||(1455186-1455257)
chr3 (437-500)||(37781089-37781152)
chr3 (386-484)||(24064389-24064487)
chr3 (435-489)||(32980679-32980733)
chr3 (413-470)||(53559648-53559705)
chr3 (433-481)||(51584442-51584490)
[»] chr1 (27 HSPs)
chr1 (386-500)||(40783667-40783781)
chr1 (386-500)||(321779-321893)
chr1 (386-500)||(23045289-23045403)
chr1 (386-500)||(47037862-47037976)
chr1 (386-500)||(284486-284600)
chr1 (386-500)||(23526392-23526506)
chr1 (386-500)||(27210965-27211079)
chr1 (386-500)||(33082897-33083011)
chr1 (386-500)||(24771916-24772030)
chr1 (386-500)||(40562296-40562409)
chr1 (386-500)||(46771791-46771905)
chr1 (411-500)||(40261320-40261409)
chr1 (388-498)||(27143026-27143134)
chr1 (386-500)||(51064764-51064878)
chr1 (386-485)||(23166861-23166960)
chr1 (413-500)||(40052501-40052588)
chr1 (386-500)||(31003797-31003911)
chr1 (387-500)||(18396847-18396960)
chr1 (393-500)||(24876714-24876821)
chr1 (405-496)||(34458753-34458844)
chr1 (386-498)||(31061466-31061581)
chr1 (403-470)||(1749457-1749524)
chr1 (386-500)||(14925617-14925729)
chr1 (386-489)||(25929262-25929365)
chr1 (411-488)||(1837860-1837940)
chr1 (412-467)||(14350510-14350565)
chr1 (435-500)||(11248820-11248885)
[»] scaffold1770 (1 HSPs)
scaffold1770 (386-500)||(315-428)
[»] scaffold0062 (1 HSPs)
scaffold0062 (396-500)||(287-391)
[»] scaffold0054 (1 HSPs)
scaffold0054 (386-500)||(45606-45720)
[»] scaffold0025 (1 HSPs)
scaffold0025 (410-489)||(65199-65278)
[»] scaffold0168 (1 HSPs)
scaffold0168 (386-500)||(7821-7935)
[»] scaffold0343 (1 HSPs)
scaffold0343 (386-500)||(6911-7024)
[»] scaffold0056 (1 HSPs)
scaffold0056 (386-500)||(71236-71350)
[»] scaffold0036 (1 HSPs)
scaffold0036 (435-500)||(23175-23240)
[»] scaffold0003 (1 HSPs)
scaffold0003 (435-500)||(252633-252698)
[»] scaffold1254 (1 HSPs)
scaffold1254 (399-469)||(1036-1106)
[»] scaffold0419 (1 HSPs)
scaffold0419 (399-469)||(6523-6593)
[»] scaffold0076 (1 HSPs)
scaffold0076 (404-485)||(15351-15432)
[»] scaffold0009 (1 HSPs)
scaffold0009 (435-500)||(147265-147330)
[»] scaffold0002 (1 HSPs)
scaffold0002 (439-500)||(369448-369509)


Alignment Details
Target: chr6 (Bit Score: 111; Significance: 8e-56; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 1605845 - 1605731
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605845 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 1605746  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  1605745 ccttgcatatttatt 1605731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 13757474 - 13757360
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13757474 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 13757375  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  13757374 ccttgcatatttatt 13757360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 8626749 - 8626635
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  8626749 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 8626650  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  8626649 ccttgcatatttatt 8626635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 15064705 - 15064819
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15064705 gtttcataatacttgtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaataatac 15064804  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  15064805 ccttgcatatttatt 15064819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 8235892 - 8235778
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  8235892 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaatattaattattgtcttatcaataatac 8235793  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  8235792 ccttacatatttatt 8235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 4129693 - 4129580
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  4129693 gtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaataatac 4129595  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  4129594 ccttgcatatttatt 4129580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 7761567 - 7761453
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||| | |||||||||||||    
T  7761567 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaatattaattattattttgtcaataatac 7761468  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  7761467 ccttgcatatttatt 7761453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 29260459 - 29260345
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||    
T  29260459 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgcaacattaattactgtcttgtcaataatac 29260360  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  29260359 ccttacatatttatt 29260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 17942710 - 17942596
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  17942710 gtttcataatacttgtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatac 17942611  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  17942610 ccttacatatttatt 17942596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 31559748 - 31559862
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  31559748 gtttcataatacttctccattttagagaataattttattttacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgttaataatac 31559847  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  31559848 ccttgcatatttatt 31559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 387 - 500
Target Start/End: Original strand, 30734494 - 30734607
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    |||||||||||||||| ||||| || ||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||| |||| |||||||||||    
T  30734494 tttcataatacttgtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgcaacattaattattatcttatcaataatacc 30734593  T
Q  487 cttgcatatttatt 500  Q
    ||||||||||||||    
T  30734594 cttgcatatttatt 30734607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 20398248 - 20398362
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||| ||||  |||| || ||||||||||||||||  |||||| ||||||||| ||| ||| ||||||||||||||   |||||||||||||    
T  20398248 gtttcacaatacatgtcacttttggaaaataattttgtttcactttacttgccactttcaagttttaatgcaacattaattattaaattgtcaataatac 20398347  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  20398348 ccttacctatttatt 20398362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 26861031 - 26860917
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||| ||||  |||| |||||||| ||||||||||  ||||||||| |||||  ||||||||||||||| |||||||  |||||||||||||    
T  26861031 gtttcacaatacatgtcatttttggagaataagtttgtttcactttacttgtcattttcatgtttcaatacaacattgattattgatttgtcaataatac 26860932  T
Q  486 ccttgcatatttatt 500  Q
    | || | ||||||||    
T  26860931 ctttacctatttatt 26860917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 27580340 - 27580388
Alignment:
Q  321 atttataacatctttttagactccaaataaattattacttctcttatta 369  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27580340 atttataacatctttttagactccaaataaattattactcctcttatta 27580388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 369
Target Start/End: Original strand, 27316743 - 27316789
Alignment:
Q  323 ttataacatctttttagactccaaataaattattacttctcttatta 369  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27316743 ttataacatctttttagactccaaataaattattactcctcttatta 27316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 431 - 500
Target Start/End: Original strand, 847831 - 847900
Alignment:
Q  431 tacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||| ||||||| |||||| |||||||||||||||  ||||||||||||| |||  |||||||||    
T  847831 tacttgtcattttcaaagttcaatgcaacattaattattgctttgtcaataatactcttaaatatttatt 847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 500
Target Start/End: Complemental strand, 3798364 - 3798252
Alignment:
Q  388 ttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccc 487  Q
    |||||||||  ||||  ||||| | |||| |||||||||||  |||||||||||||||| ||| ||| |||||||||||||    || ||||||||||||    
T  3798364 ttcataatatatgtcgtttttaaataatagttttgtttcactttacttgtcactttcaagttttaatgcaacattaattatgagtttatcaataataccc 3798265  T
Q  488 ttgcatatttatt 500  Q
    || | ||||||||    
T  3798264 ttacctatttatt 3798252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 1814860 - 1814762
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataata 484  Q
    |||||| ||||| ||||  ||||  ||||||||||| ||||||  ||||||||||||| || || |||| ||||||| |||||||  ||||||||||||    
T  1814860 gtttcacaatacatgtcacttttgaagaataattttatttcactttacttgtcacttttaatttccaatgcaacattgattattggtttgtcaataata 1814762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 879309 - 879350
Alignment:
Q  441 tttcaaatttcaatacaacattaattattgtcttgtcaataa 482  Q
    ||||||| |||||| |||||||||||||||| ||||||||||    
T  879309 tttcaaagttcaatgcaacattaattattgttttgtcaataa 879350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 22321278 - 22321392
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22321278 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 22321377  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  22321378 ccttgcatatttatt 22321392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 21310688 - 21310574
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  21310688 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 21310589  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  21310588 ccttgcatatttatt 21310574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40122497 - 40122611
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40122497 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 40122596  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40122597 ccttgcatatttatt 40122611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 12071827 - 12071713
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  12071827 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattcttgtcttgtcaataatac 12071728  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  12071727 ccttgcatatttatt 12071713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 14261311 - 14261197
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  14261311 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 14261212  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  14261211 ccttgcatatttatt 14261197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 24706257 - 24706371
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24706257 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 24706356  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  24706357 ccttgcatatttatt 24706371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 25704918 - 25704804
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  25704918 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcagtgcaacattaattattgtcttgtcaataatac 25704819  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  25704818 ccttgcatatttatt 25704804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 44569104 - 44568990
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||    
T  44569104 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgcaacattaattattgtcttgtcaataatac 44569005  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  44569004 ccttgcatatttatt 44568990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 50768129 - 50768015
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  50768129 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 50768030  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  50768029 ccttacatatttatt 50768015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 21661545 - 21661659
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  21661545 gtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatac 21661644  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  21661645 ccttgcatatttatt 21661659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 21670309 - 21670423
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  21670309 gtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatac 21670408  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  21670409 ccttgcatatttatt 21670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 20249024 - 20249138
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  20249024 gtttcataatacttgtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgcaatattaattattgtcttgtcaataatac 20249123  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  20249124 ccttacatatttatt 20249138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 21065028 - 21064914
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||    
T  21065028 gtttcataatacttgttcattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgcaacattaattattgtcttgacaataatac 21064929  T
Q  486 ccttgcatatttatt 500  Q
     ||| ||||||||||    
T  21064928 tcttacatatttatt 21064914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 392 - 500
Target Start/End: Complemental strand, 31892493 - 31892385
Alignment:
Q  392 taatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgc 491  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||| || ||| |||  |||||||||||||||||||||||||||| ||||||    
T  31892493 taatacttgtctatcttggagaataattttgttttacaatacttgtcacttttaagttttaatgtaacattaattattgtcttgtcaataatagccttgc 31892394  T
Q  492 atatttatt 500  Q
    |||||||||    
T  31892393 atatttatt 31892385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 19692982 - 19692875
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgca 492  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||  || ||||||| |||||| |     
T  19692982 aatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataacacccttact 19692883  T
Q  493 tatttatt 500  Q
    ||||||||    
T  19692882 tatttatt 19692875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 19703567 - 19703460
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgca 492  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||  || ||||||| |||||| |     
T  19703567 aatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataacacccttact 19703468  T
Q  493 tatttatt 500  Q
    ||||||||    
T  19703467 tatttatt 19703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 18507276 - 18507374
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataata 484  Q
    |||||| ||||||||||  |||||||| |||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  18507276 gtttcacaatacttgtcgcttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataata 18507374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 50839042 - 50839125
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattg 470  Q
    ||||| ||||||||||  |||| |||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  50839042 tttcacaatacttgtcgcttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattg 50839125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 6128959 - 6129062
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||| ||||  ||||  |||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||||  || ||||||||||    
T  6128959 gtttcacaatacatgtcgcttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 6129058  T
Q  486 cctt 489  Q
    ||||    
T  6129059 cctt 6129062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 386 - 489
Target Start/End: Complemental strand, 32543746 - 32543643
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  |||||||||||||||||||||||   ||||||| |||||||| ||| ||| | |||||||||||||  |||||| ||||||    
T  32543746 gtttcacaatacttgtcgcttttagagaataattttgtttcattttacttgttactttcaagttttaatgcgacattaattattggtttgtcattaatac 32543647  T
Q  486 cctt 489  Q
    ||||    
T  32543646 cctt 32543643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 34324655 - 34324707
Alignment:
Q  448 tttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  34324655 tttcaatgcaacattaatgattttcttgtcaataatacccttgcatatttatt 34324707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 498
Target Start/End: Complemental strand, 48652472 - 48652379
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatattta 498  Q
    |||| |||||||||||||||||||  ||||||| ||||| || ||| ||| | |||||||||||||  || | |||||||||||| | ||||||    
T  48652472 ttttggagaataattttgtttcactttacttgttactttaaagttttaatgcgacattaattattgatttattaataatacccttacctattta 48652379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 464
Target Start/End: Complemental strand, 1615255 - 1615226
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaa 464  Q
    ||||||||||||||||||||||||||||||    
T  1615255 tgtcactttcaaatttcaatacaacattaa 1615226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 464
Target Start/End: Complemental strand, 1615307 - 1615278
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaa 464  Q
    ||||||||||||||||||||||||||||||    
T  1615307 tgtcactttcaaatttcaatacaacattaa 1615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 30939197 - 30939262
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||| ||||||||| | |||| ||  ||||| |||||||| |||||||||    
T  30939197 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttggatatttatt 30939262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 53691856 - 53691791
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| ||||||||| |||||| | |||| || |||||| |||||||  |||||||||    
T  53691856 tgtcactttcaaagttcaatacatcattaaatgttgttttatcaatattacccttaaatatttatt 53691791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 20714349 - 20714413
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    ||||||||||||| ||| ||||| | || || ||| ||| |||||||||| ||||||||||||||    
T  20714349 ttttagagaataaatttatttcatattatttatcatttttaaatttcaatgcaacattaattatt 20714413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 23367056 - 23366942
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23367056 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaataatac 23366957  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  23366956 ccttgcatatttatt 23366942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 22388148 - 22388262
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22388148 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 22388247  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  22388248 ccttgcatatttatt 22388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 3519174 - 3519060
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  3519174 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgtaacattaattattgtcttgtcaataatac 3519075  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  3519074 ccttgcatatttatt 3519060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 1102768 - 1102654
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  1102768 gtttcataatacttgtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataacac 1102669  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  1102668 ccttgcatatttatt 1102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 37673753 - 37673867
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  37673753 gtttcataatacttgtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgcaacattaattattgtcttgtcaataatac 37673852  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  37673853 ccttgcatatttatt 37673867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 39938437 - 39938323
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||||||||    
T  39938437 gttttataatacttgtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgcaacattaattattgtcttgtcaataatac 39938338  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  39938337 ccttgcatatttatt 39938323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 1646554 - 1646440
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||| |||||||||||||||    
T  1646554 gtttcataatacctgtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgcaacattaagtattatcttgtcaataatac 1646455  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  1646454 ccttgcatatttatt 1646440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 12969750 - 12969864
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  12969750 gtttcataatacttgtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtcttctcaataatac 12969849  T
Q  486 ccttgcatatttatt 500  Q
    ||||  |||||||||    
T  12969850 ccttaaatatttatt 12969864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 40756921 - 40757024
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||||  || ||||||||||||| ||||||| |||||||||||||||  || ||||||||||    
T  40756921 gtttcataatacttgtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatac 40757020  T
Q  486 cctt 489  Q
    ||||    
T  40757021 cctt 40757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 39561905 - 39562014
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||| ||||  |||| |||||||||||||||||||     |||||||||| |||||||||| |||||||||||||||  |||||||||||||    
T  39561905 gtttcacaatacatgtcgtttttggagaataattttgtttcac-----ttgtcacttttaaatttcaatgcaacattaattattggtttgtcaataatac 39561999  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  39562000 ccttacttatttatt 39562014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 500
Target Start/End: Original strand, 28110139 - 28110219
Alignment:
Q  420 ttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||||||||| ||||||||| |||||| ||||||| |||||||||||||||  || |||||||||||||| ||||||||||    
T  28110139 ttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattggtttatcaataatacccttacatatttatt 28110219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 499
Target Start/End: Complemental strand, 4917998 - 4917915
Alignment:
Q  416 aattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttat 499  Q
    ||||||| |||||| |||||||||||||| ||||| ||| ||||||||||||||| |||||||||| | ||||| | |||||||    
T  4917998 aattttgcttcacattacttgtcactttcgaattttaattcaacattaattattggcttgtcaatagttcccttacctatttat 4917915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 485
Target Start/End: Complemental strand, 36447525 - 36447426
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||| ||||  ||||||||||||||||||||||||  || | ||||||||||||||||||| |||  ||||||||||  || ||||||||||    
T  36447525 gtttcacaatacatgtcgcttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgcaatgttaattattggtttatcaataatac 36447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 37284529 - 37284641
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||| ||| |||| |||||||||||||||||||  ||||||||| |||||| ||||||| ||||||| |||||||  || ||| ||||||    
T  37284529 gtttcacaatactt-tctcttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgcaacatt-attattgatttatcactaatac 37284626  T
Q  486 ccttgcatatttatt 500  Q
     ||| | ||||||||    
T  37284627 tcttacctatttatt 37284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 19976568 - 19976512
Alignment:
Q  413 aataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    |||||||||||||||   |||||||||||||||| ||||||| ||||||||||||||    
T  19976568 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattatt 19976512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 32838964 - 32839022
Alignment:
Q  411 agaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    |||||||||||||||||   |||||||||||||||| ||||||| ||| ||||||||||    
T  32838964 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaatattaattatt 32839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 14780023 - 14779964
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaa 464  Q
    |||| ||||||||||||||||||   |||||||||||||||| ||||||| ||| |||||    
T  14780023 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaagattaa 14779964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 500
Target Start/End: Original strand, 28401396 - 28401459
Alignment:
Q  437 tcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||||||||| ||||||  | |||||||||||||  ||||||||||||||||||| || |||||    
T  28401396 tcactttcaagtttcaaggccacattaattattgatttgtcaataatacccttgcctaattatt 28401459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 435 - 489
Target Start/End: Original strand, 13753994 - 13754048
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    ||||||||||||| |||||||||||||||| | |||| || |||||| |||||||    
T  13753994 tgtcactttcaaagttcaatacaacattaaatgttgttttatcaatattaccctt 13754048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 500
Target Start/End: Complemental strand, 34242221 - 34242127
Alignment:
Q  406 tttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||||||||||||   |||| |||||||| || ||| ||| ||| ||||| |||||  || ||||||||| |||| | ||||||||    
T  34242221 tttagagaataattttgtttcattttactggtcacttttaagttttaatgcaatattaaatattggtttatcaataatatccttacctatttatt 34242127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 43077331 - 43077396
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||| ||||||||| |||||| ||  ||||| |||||||  |||||||||    
T  43077331 tgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattacccttagatatttatt 43077396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 5e-51; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 7147180 - 7147066
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7147180 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 7147081  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  7147080 ccttgcatatttatt 7147066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40058313 - 40058427
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40058313 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 40058412  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40058413 ccttgcatatttatt 40058427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40918741 - 40918855
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40918741 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 40918840  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40918841 ccttgcatatttatt 40918855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 2539940 - 2540054
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2539940 gtttcataatacttgtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 2540039  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  2540040 ccttgcatatttatt 2540054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 3585718 - 3585604
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  3585718 gtttcataatacttgtctattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatac 3585619  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  3585618 ccttgcatatttatt 3585604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 30999534 - 30999648
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  30999534 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 30999633  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  30999634 ccttgcatatttatt 30999648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 37345838 - 37345724
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  37345838 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgcaacattaattattgtcttgtcaataatac 37345739  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  37345738 ccttgcatatttatt 37345724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 43275409 - 43275523
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  43275409 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattatcttgtcaataatac 43275508  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  43275509 ccttgcatatttatt 43275523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 11174233 - 11174347
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11174233 gtttcataatacttgttcattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 11174332  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  11174333 ccttgcatatttatt 11174347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 11646335 - 11646449
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  11646335 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatac 11646434  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  11646435 ccttgcatatttatt 11646449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 36068347 - 36068233
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  36068347 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatac 36068248  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  36068247 ccttgcatatttatt 36068233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 386 - 498
Target Start/End: Complemental strand, 27035262 - 27035150
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  27035262 gtttcataatacttgttcattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 27035163  T
Q  486 ccttgcatattta 498  Q
    |||| ||||||||    
T  27035162 ccttacatattta 27035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 500
Target Start/End: Original strand, 20546308 - 20546417
Alignment:
Q  391 ataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttg 490  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||     
T  20546308 ataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgcaacattaattattgtcttgtcaataataccctta 20546407  T
Q  491 catatttatt 500  Q
    ||||||||||    
T  20546408 catatttatt 20546417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 27563885 - 27563991
Alignment:
Q  394 atacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcat 493  Q
    |||||||||  |||| ||||| |||||||||||| | |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| | |    
T  27563885 atacttgtcgcttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttacct 27563984  T
Q  494 atttatt 500  Q
    |||||||    
T  27563985 atttatt 27563991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 35866880 - 35866766
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| |||||||||||||||| ||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||||  || ||||||||||    
T  35866880 gtttcacaatacttgtctattttggagaataattttgtttcattttacttgtcactttcaagtttcaattcaacattaattattggtttatcaataatac 35866781  T
Q  486 ccttgcatatttatt 500  Q
     ||| ||||| ||||    
T  35866780 tcttacatatctatt 35866766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 28568184 - 28568071
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| |||||||||| ||||| |||||| |||||||||||   ||||||||||||| || ||||||| |||||||||||||||  || |||||| ||||    
T  28568184 tttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaatattacc 28568085  T
Q  487 cttgcatatttatt 500  Q
    ||| | ||||||||    
T  28568084 cttacctatttatt 28568071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 28575777 - 28575664
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| |||||||||| ||||| |||||| |||||||||||   ||||||||||||| || ||||||| |||||||||||||||  || |||||| ||||    
T  28575777 tttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaatattacc 28575678  T
Q  487 cttgcatatttatt 500  Q
    ||| | ||||||||    
T  28575677 cttacctatttatt 28575664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 26628845 - 26628940
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||| |||||||||||||||||||  || |||||| |||||| ||||||| |||||||||||||||  || |||||||||||||| | ||||||||    
T  26628845 ttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgcaacattaattattgatttatcaataatacccttacctatttatt 26628940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 489
Target Start/End: Original strand, 10180897 - 10180981
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    |||| ||||| |||||||||||||| |||||||||||||||| ||||||| |||||||| ||||    |||||||||||||||||    
T  10180897 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcaatgcaacattagttatgaatttgtcaataataccctt 10180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 45400780 - 45400863
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    ||||||||||||  |||  |||| |||||||||||||||||||  || |||||||||| |||||||||| ||||||||||||||    
T  45400780 gtttcataatacaagtcgtttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgcaacattaattatt 45400863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 13880991 - 13881063
Alignment:
Q  412 gaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataata 484  Q
    |||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||  |||| |||||||    
T  13880991 gaataattttgtttcaaattacttgtcactttcaagtttcaatgcaatattaattattgatttgttaataata 13881063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 28562681 - 28562574
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgca 492  Q
    ||||||| || |||||  ||||| |||||||||||   |||||||||||||||| ||||||| |||||||||||||||  || |||||| ||| ||| |     
T  28562681 aatacttatccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaatattactcttacc 28562582  T
Q  493 tatttatt 500  Q
    ||||||||    
T  28562581 tatttatt 28562574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 489
Target Start/End: Original strand, 30906706 - 30906802
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    ||||||||||  ||||  ||||||||||| ||| ||| ||||||| ||||| |||||| ||| ||| |||||||||||  |||| ||||||| ||||    
T  30906706 aatacttgtcgtttttgaagaataattttattttacattacttgttacttttaaattttaatgcaatattaattattgaattgttaataatatcctt 30906802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 36453134 - 36453248
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  36453134 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 36453233  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  36453234 ccttgcatatttatt 36453248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 27814078 - 27813964
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  27814078 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaataatac 27813979  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  27813978 ccttgcatatttatt 27813964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 10981774 - 10981661
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  10981774 tttcataatatttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacc 10981675  T
Q  487 cttgcatatttatt 500  Q
    ||||||||||||||    
T  10981674 cttgcatatttatt 10981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 25614363 - 25614477
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  25614363 gtttcataataattgtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttgtcaataatac 25614462  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  25614463 ccttgcatatttatt 25614477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 47110717 - 47110603
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  47110717 gtttcataatacttattcattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 47110618  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  47110617 ccttgcatatttatt 47110603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 40349228 - 40349115
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||| | |||||||||||    
T  40349228 gtttcataatacttgtccattttagagaataattt-gtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtttggtcaataatac 40349130  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40349129 ccttgcatatttatt 40349115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 27941013 - 27941108
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||| ||||| |||||||||||||| |||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||| | ||||||||    
T  27941013 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcattgcaacattaattattggcttgtcaataatacccttacttatttatt 27941108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 16662359 - 16662246
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| ||||||||||  ||||  ||||||||||||||| | | |||||||||||||||| ||||||| |||||||||||||||  |||||| |||||||    
T  16662359 tttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcattaatacc 16662260  T
Q  487 cttgcatatttatt 500  Q
    ||| | ||||||||    
T  16662259 cttacctatttatt 16662246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 17636719 - 17636606
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| ||||||||||  ||||  ||||||||||||||| | | |||||||||||||||| ||||||| |||||||||||||||  |||||| |||||||    
T  17636719 tttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcattaatacc 17636620  T
Q  487 cttgcatatttatt 500  Q
    ||| | ||||||||    
T  17636619 cttacctatttatt 17636606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 3091755 - 3091666
Alignment:
Q  411 agaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||||||||  ||||||||| ||| || ||||||| ||||||||| |||||  ||||||||||||||||| ||||||||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgcaacattaaatattggtttgtcaataatacccttacatatttatt 3091666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 481
Target Start/End: Complemental strand, 16360643 - 16360549
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaata 481  Q
    |||||| |||| |||||  |||| ||||||||||| | |||||  |||||||||||||||| ||||||||||||||||| |||||  |||||||||    
T  16360643 gtttcacaatatttgtcgtttttggagaataattt-gcttcactttacttgtcactttcaagtttcaatacaacattaaatattggtttgtcaata 16360549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 24456800 - 24456889
Alignment:
Q  411 agaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||||| ||  ||||||||||| |||| ||||||| ||||||||| || |   || |||||||||||||||| ||| ||||    
T  24456800 agaataattttgtttaactttacttgtcactctcaagtttcaatgcaacattaactactaatttatcaataatacccttgcctatgtatt 24456889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 491
Target Start/End: Complemental strand, 6737302 - 6737252
Alignment:
Q  441 tttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgc 491  Q
    ||||||| |||||| ||| |||||||||||| || ||||||||||||||||    
T  6737302 tttcaaagttcaatgcaatattaattattgttttatcaataatacccttgc 6737252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 8380157 - 8380091
Alignment:
Q  434 ttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||||||||| || |||||||||||||||| ||||||  |||| || ||||||||| | ||||||||    
T  8380157 ttgtcacttttaagtttcaatacaacattagttattggtttgttaaaaatacccttacttatttatt 8380091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 28200566 - 28200488
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaat 465  Q
    |||||||||| |||||  ||||  |||| |||||||||||||  ||||||||||||| || ||| |||||| |||||||    
T  28200566 tttcataatatttgtcgttttttaagaacaattttgtttcactttacttgtcacttttaagttttaatacagcattaat 28200488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 35746848 - 35746783
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||||||||||||| | |||| ||  ||||| |||||||  |||||||||    
T  35746848 tgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattacccttagatatttatt 35746783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 46563327 - 46563262
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||| ||||||||||| |||||| ||| || || ||||||||  ||||||||    
T  46563327 tgtcactttcaaagttcagtacaacattaaatattgttttgacattattacccttgattatttatt 46563262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 477
Target Start/End: Complemental strand, 31229984 - 31229948
Alignment:
Q  441 tttcaaatttcaatacaacattaattattgtcttgtc 477  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  31229984 tttcaaagttcaatacaacattaattattgttttgtc 31229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40886620 - 40886734
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40886620 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 40886719  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40886720 ccttgcatatttatt 40886734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 12806863 - 12806977
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  12806863 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 12806962  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  12806963 ccttgcatatttatt 12806977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 30720502 - 30720616
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  30720502 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattagttattgtcttgtcaataatac 30720601  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  30720602 ccttgcatatttatt 30720616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 36561109 - 36561223
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  36561109 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatac 36561208  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  36561209 ccttgcatatttatt 36561223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 10285068 - 10285181
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  10285068 gtttcataatacttgtctattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataata- 10285166  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  10285167 ccttgcatatttatt 10285181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 25773916 - 25773802
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  25773916 gtttcataatacttgtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 25773817  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  25773816 ccttgcatatttatt 25773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 37900633 - 37900747
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37900633 gtttcataatacttgtctattttgaagaataattttgtttcacgatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 37900732  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  37900733 ccttgcatatttatt 37900747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 16983524 - 16983410
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  16983524 gttttataatacttgtctattttgaagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttttcaataatac 16983425  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||| ||||    
T  16983424 ccttgcatatctatt 16983410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 23097734 - 23097848
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||  ||||||| ||| ||||||||||||||||||||||||||    
T  23097734 gtttcataatacttgtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgcaatattaattattgtcttgtcaataatac 23097833  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  23097834 ccttacatatttatt 23097848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 25683239 - 25683353
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  25683239 gtttcataatacttgtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatac 25683338  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  25683339 ccttacatatttatt 25683353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 386 - 485
Target Start/End: Original strand, 734349 - 734448
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| |||||||||| ||||| |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  || ||||||||||    
T  734349 gtttcacaatacttgtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaatacaacattaattattggtttatcaataatac 734448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 500
Target Start/End: Complemental strand, 39071147 - 39071035
Alignment:
Q  388 ttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccc 487  Q
    |||| |||||||||||||||| |||||||||||||||||||  ||||||||||||| || | ||||| |||||||||||||||  || |||||||| | |    
T  39071147 ttcacaatacttgtctatttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgcaacattaattattggtttatcaataatccac 39071048  T
Q  488 ttgcatatttatt 500  Q
    || | ||||||||    
T  39071047 ttacctatttatt 39071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 11319823 - 11319709
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||||||||||||||||||||||||||||||||  || || |||||||||  ||| ||| ||| |||||||||||  || | ||||||||    
T  11319823 gtttcataatacttgtctattttagagaataattttgtttcactttatttatcactttcaggttttaatgcaatattaattattggtttattaataatac 11319724  T
Q  486 ccttgcatatttatt 500  Q
     ||| | ||||||||    
T  11319723 tcttacctatttatt 11319709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 395 - 489
Target Start/End: Original strand, 30402981 - 30403075
Alignment:
Q  395 tacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    ||||||||  ||||||||||||||||| |||||   ||||||||||||| || ||||||||||| |||||||||||  |||||||||||||||||    
T  30402981 tacttgtcgcttttagagaataattttatttcattttacttgtcacttttaagtttcaatacaaaattaattattggtttgtcaataataccctt 30403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 431 - 500
Target Start/End: Complemental strand, 11797768 - 11797699
Alignment:
Q  431 tacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||| |||||||||||||||||||||||||||||   |||||||| |||||||||| ||||||||    
T  11797768 tacttgtcattttcaaatttcaatacaacattaattattagtttgtcaatgatacccttgcttatttatt 11797699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 489
Target Start/End: Complemental strand, 16054377 - 16054275
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| ||||| ||||  |||| ||||||||||||| |||||  |  ||||||||||||| ||||||| ||||||||||||||   ||||||||||||||    
T  16054377 tttcaaaatacatgtcgcttttggagaataattttggttcactttggttgtcactttcaagtttcaatgcaacattaattattagtttgtcaataatacc 16054278  T
Q  487 ctt 489  Q
    |||    
T  16054277 ctt 16054275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 485
Target Start/End: Original strand, 11795314 - 11795392
Alignment:
Q  407 ttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||||||||  || || |||||||||| ||||||| ||||||||||||| |  || ||||||||||    
T  11795314 ttagagaataattttgtttcactttatttatcactttcaagtttcaatgcaacattaattataggtttatcaataatac 11795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 439 - 500
Target Start/End: Original strand, 7277486 - 7277547
Alignment:
Q  439 actttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||| ||||| | ||||||||    
T  7277486 acttttaaatttcaatgcaaaattaattattgtcttgtcaataatgcccttacttatttatt 7277547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 26168156 - 26168075
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||||||||||||||||||||||  || ||||||||||||| ||||||| ||| |||||| |||   |||| |||||||||    
T  26168156 ttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgcaagattaatgatttgtttgttaataatacc 26168075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 485
Target Start/End: Original strand, 1056635 - 1056732
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  |||| |||||||||||| ||||| | ||||  |||||||||| ||||||| ||||||||||||||   |||||||||||||    
T  1056635 gtttcacaatacttgtcacttttggagaataattttatttca-attacta-tcactttcaagtttcaatgcaacattaattattagtttgtcaataatac 1056732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 490
Target Start/End: Complemental strand, 12305736 - 12305687
Alignment:
Q  441 tttcaaatttcaatacaacattaattattgtcttgtcaataatacccttg 490  Q
    ||||||| |||||| ||||||| |||||||| ||||||||||||||||||    
T  12305736 tttcaaagttcaatgcaacattgattattgttttgtcaataatacccttg 12305687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 25785928 - 25785993
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||||||||||||| | |||| ||| || || ||||||||  ||||||||    
T  25785928 tgtcactttcaaagttcaatacaacattaaatgttgttttggcattattacccttgattatttatt 25785993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 15629376 - 15629320
Alignment:
Q  413 aataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    ||||||||||||||||  ||||||| | ||| |||||||||| || |||||||||||    
T  15629376 aataattttgtttcactttacttgttatttttaaatttcaatgcagcattaattatt 15629320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 46694120 - 46694234
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  46694120 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 46694219  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  46694220 ccttgcatatttatt 46694234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 13365110 - 13364996
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13365110 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 13365011  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  13365010 ccttgcatatttatt 13364996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 23087941 - 23088055
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23087941 gtttcataatacttgtcgattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 23088040  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  23088041 ccttgcatatttatt 23088055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 29375399 - 29375285
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |    
T  29375399 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatgc 29375300  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  29375299 ccttgcatatttatt 29375285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 36881547 - 36881433
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  36881547 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 36881448  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  36881447 ccttgcatatttatt 36881433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 3383343 - 3383229
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3383343 gttttataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 3383244  T
Q  486 ccttgcatatttatt 500  Q
     ||||||||||||||    
T  3383243 tcttgcatatttatt 3383229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 19241678 - 19241792
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||    
T  19241678 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgcaacattaattattgacttgtcaataatac 19241777  T
Q  486 ccttgcatatttatt 500  Q
    |||||||| ||||||    
T  19241778 ccttgcatgtttatt 19241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 199121 - 199008
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||| ||||||||||||||    
T  199121 tttcataatagttgtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgcaacattaattattgttttgtcaataatacc 199022  T
Q  487 cttgcatatttatt 500  Q
    ||||||||||||||    
T  199021 cttgcatatttatt 199008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 13703479 - 13703365
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||| |  ||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  13703479 gtttcataatacttgtccattctgaagaataaatttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaataatac 13703380  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  13703379 ccttgcatatttatt 13703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 391 - 500
Target Start/End: Complemental strand, 43750398 - 43750289
Alignment:
Q  391 ataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttg 490  Q
    |||||||||||| |||||  |||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  43750398 ataatacttgtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatactcttg 43750299  T
Q  491 catatttatt 500  Q
    ||||||||||    
T  43750298 catatttatt 43750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 386 - 485
Target Start/End: Complemental strand, 48820607 - 48820508
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  48820607 gtttcataatacttgtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatac 48820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 31873886 - 31873986
Alignment:
Q  399 tgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatattta 498  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||  |||||||    
T  31873886 tgtccattttagagaataattttatttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaa-aatacccttatatattta 31873984  T
Q  499 tt 500  Q
    ||    
T  31873985 tt 31873986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 32834999 - 32835102
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||| ||||||||||||| |||||| | ||||||||| |||||| ||||||| ||||||||| |||||| |||||||||||||    
T  32834999 gtttcataatacttgtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgcaacattaagtattgttttgtcaataatac 32835098  T
Q  486 cctt 489  Q
    ||||    
T  32835099 cctt 32835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 18355878 - 18355992
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| |||||||||| |||||  ||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||  || ||||||||||    
T  18355878 gtttcacaatacttgtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattgatttatcaataatac 18355977  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  18355978 ccttacttatttatt 18355992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 388 - 500
Target Start/End: Complemental strand, 48963384 - 48963272
Alignment:
Q  388 ttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccc 487  Q
    |||||| ||||| ||||||||||||||||||||| ||||| |||| || ||| ||| || ||||||| ||||||||||||||||||||||||||||| ||    
T  48963384 ttcatattacttatctattttagagaataattttatttcataatatttatcatttttaagtttcaatgcaacattaattattgtcttgtcaataatatcc 48963285  T
Q  488 ttgcatatttatt 500  Q
    ||  |||||||||    
T  48963284 ttatatatttatt 48963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 387 - 485
Target Start/End: Complemental strand, 48436490 - 48436392
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||| |||| |||||  |||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||    
T  48436490 tttcacaatatttgtcacttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattagcttgtcaataatac 48436392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 489
Target Start/End: Complemental strand, 54086818 - 54086716
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| |||||||||| ||||| ||||||| ||||||||||   || ||||||||||||| |||||||||||||||||||||||  || |||||||||||    
T  54086818 tttcacaatacttgtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaatacaacattaattattgatttatcaataatacc 54086719  T
Q  487 ctt 489  Q
    |||    
T  54086718 ctt 54086716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 26783729 - 26783661
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacat 461  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||| ||||||    
T  26783729 aatacttgtctattttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacat 26783661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 27707026 - 27707101
Alignment:
Q  413 aataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccct 488  Q
    ||||||||| |||||||||| || |||||||||||||| |||  |||||||| |||||||||||||||||||||||    
T  27707026 aataattttatttcacaatatttatcactttcaaattttaatgtaacattaactattgtcttgtcaataataccct 27707101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 6901816 - 6901725
Alignment:
Q  398 ttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    ||||| ||||| |||||||||||||||||||  ||||||||||||| || ||||||| |||||||||| ||||  || ||||||||| ||||    
T  6901816 ttgtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgcaacattaatcattgatttatcaataatatcctt 6901725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 484
Target Start/End: Original strand, 52009105 - 52009158
Alignment:
Q  431 tacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataata 484  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  52009105 tacttgtcactttcaagtttcgatgcaacattaattattgtcttgtcaataata 52009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 1455186 - 1455257
Alignment:
Q  411 agaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataa 482  Q
    ||||||| ||||||| ||  |||||||||||||| ||||||||| |||||||||||||||  ||||||||||    
T  1455186 agaataaatttgttttactttacttgtcactttccaatttcaatgcaacattaattattggtttgtcaataa 1455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 500
Target Start/End: Complemental strand, 37781152 - 37781089
Alignment:
Q  437 tcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||||||||||||||||| |||  ||||||||||  |||||||||||||||||  |||||||||    
T  37781152 tcactttcaaatttcaatccaaagttaattattggtttgtcaataatacccttaaatatttatt 37781089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 24064487 - 24064389
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataata 484  Q
    |||||| ||||| ||||  |||| |||||||||||| ||||||  ||| |||||||||||| ||| |||  ||||||||||||||  || |||||||||    
T  24064487 gtttcacaatacatgtcgtttttggagaataattttatttcactttacatgtcactttcaagttttaatgtaacattaattattggtttatcaataata 24064389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 435 - 489
Target Start/End: Original strand, 32980679 - 32980733
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    ||||||||||||| |||||||||||||||| || ||| || |||||| |||||||    
T  32980679 tgtcactttcaaaattcaatacaacattaaataatgttttatcaatattaccctt 32980733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 53559648 - 53559705
Alignment:
Q  413 aataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattg 470  Q
    |||||||||||||||   ||||||||||| |||| ||||||| |||||||||| ||||    
T  53559648 aataattttgtttcaatttacttgtcactctcaagtttcaatgcaacattaatcattg 53559705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 481
Target Start/End: Complemental strand, 51584490 - 51584442
Alignment:
Q  433 cttgtcactttcaaatttcaatacaacattaattattgtcttgtcaata 481  Q
    |||||||  |||||||||||||  ||||||||||||||| |||||||||    
T  51584490 cttgtcatattcaaatttcaatgtaacattaattattgttttgtcaata 51584442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 5e-51; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40783667 - 40783781
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40783667 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 40783766  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40783767 ccttgcatatttatt 40783781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 321893 - 321779
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  321893 gtttcataatacttgtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 321794  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  321793 ccttgcatatttatt 321779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 23045289 - 23045403
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23045289 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatac 23045388  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  23045389 ccttgcatatttatt 23045403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 47037862 - 47037976
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  47037862 gtttcataatacttgtctattttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 47037961  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  47037962 ccttgcatatttatt 47037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 284600 - 284486
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||    
T  284600 gtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttatcaataatac 284501  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  284500 ccttgcatatttatt 284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 23526506 - 23526392
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23526506 gtttcataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 23526407  T
Q  486 ccttgcatatttatt 500  Q
    |||| ||||||||||    
T  23526406 ccttacatatttatt 23526392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 27210965 - 27211079
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||    
T  27210965 gtttcataatatttgtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgcaacattaattattgtcttgtcaataatac 27211064  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  27211065 ccttgcatatttatt 27211079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 33083011 - 33082897
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  33083011 gtttcataatacttgtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtcttctcaataatac 33082912  T
Q  486 ccttgcatatttatt 500  Q
    ||||  |||||||||    
T  33082911 ccttaaatatttatt 33082897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 24771916 - 24772030
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||| |||||||||||| || |||||||||     
T  24771916 gtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgttttttcaataatag 24772015  T
Q  486 ccttgcatatttatt 500  Q
    ||||  |||||||||    
T  24772016 ccttaaatatttatt 24772030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 40562296 - 40562409
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||| |||||||||||| |||||  ||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||     
T  40562296 gttttataatacttgtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaatgata- 40562394  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  40562395 ccttgcatatttatt 40562409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 46771905 - 46771791
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||  |||||  ||||||||||||||||||||||||| |||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  46771905 gtttcataatacttgttcattttgaagaataattttgtttcacaatacttatcactttcaagtttcaatgtaacattaattattttcttgtcaataatac 46771806  T
Q  486 ccttgcatatttatt 500  Q
     ||| ||||||||||    
T  46771805 tcttacatatttatt 46771791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 40261320 - 40261409
Alignment:
Q  411 agaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||| ||||||||||    
T  40261320 agaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatacccttacatatttatt 40261409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 388 - 498
Target Start/End: Original strand, 27143026 - 27143134
Alignment:
Q  388 ttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccc 487  Q
    ||||||||| |||||  |||| |||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||  |||||||||||||||    
T  27143026 ttcataataattgtcgcttttggagaataattttgtttcacattacttgtcact--caagtttcaatacaacattaattattggtttgtcaataataccc 27143123  T
Q  488 ttgcatattta 498  Q
    || | ||||||    
T  27143124 ttacctattta 27143134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 51064764 - 51064878
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| |||||||||| |||||||||||||||||||||||||  || ||||||||||||| ||||||| |||| |||||||||   || ||||||||||    
T  51064764 gtttcacaatacttgtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgcaacgttaattattagtttatcaataatac 51064863  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  51064864 ccttacctatttatt 51064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 386 - 485
Target Start/End: Original strand, 23166861 - 23166960
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| |||||| |||  ||||||||||||||||||||||||| || || | |||||||| |||||||||||||||||||||||  |||||||||||||    
T  23166861 gtttcacaatactcgtcgcttttagagaataattttgtttcacattatttattactttcaagtttcaatacaacattaattattgatttgtcaataatac 23166960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 40052501 - 40052588
Alignment:
Q  413 aataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||  |||||||||||| | |||| ||||||||    
T  40052501 aataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatatcgttgcttatttatt 40052588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 31003797 - 31003911
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||| ||  |||| |||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||| |||  ||||| |||||||    
T  31003797 gtttcacaatacttatcgcttttggagaataattttgtttcacattacttgccactttcaagtttcaatgcaacattaattgttggtttgtccataatac 31003896  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  31003897 ccttacctatttatt 31003911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 18396960 - 18396847
Alignment:
Q  387 tttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacc 486  Q
    ||||| |||||||||   |||| |||||||||||||||| |||  | ||||||||||||| ||||||| ||||||||||||||| ||| |||||||| ||    
T  18396960 tttcacaatacttgttgcttttggagaataattttgttttacataatttgtcactttcaagtttcaatgcaacattaattattgacttttcaataattcc 18396861  T
Q  487 cttgcatatttatt 500  Q
    ||| | ||||||||    
T  18396860 cttacttatttatt 18396847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 24876821 - 24876714
Alignment:
Q  393 aatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgca 492  Q
    ||||||||||  |||| ||||||||||||||||||   |||||||||||||||| | ||||| | |||||||||||||  ||||||||||||| ||| |     
T  24876821 aatacttgtcgtttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgcgacattaattattggtttgtcaataatactcttact 24876722  T
Q  493 tatttatt 500  Q
    ||||||||    
T  24876721 tatttatt 24876714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 405 - 496
Target Start/End: Original strand, 34458753 - 34458844
Alignment:
Q  405 ttttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatt 496  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||||  ||  | ||||||||||| ||||||    
T  34458753 ttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgcaacattaattattggtttaccgataatacccttacatatt 34458844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 498
Target Start/End: Original strand, 31061466 - 31061581
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatact---tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataa 482  Q
    |||||| ||||||||||  |||| || ||||||||| ||||||| ||||   ||||||| |||| ||||||| |||||||||||||||  ||| ||||||    
T  31061466 gtttcacaatacttgtcacttttggaaaataattttatttcacattactacttgtcactctcaagtttcaatgcaacattaattattggtttgacaataa 31061565  T
Q  483 tacccttgcatattta 498  Q
    ||||||  ||||||||    
T  31061566 taccctcacatattta 31061581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 1749524 - 1749457
Alignment:
Q  403 tattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattg 470  Q
    |||||||  |||||||||||||||||||||||||| ||||| || ||||||| |||||||| ||||||    
T  1749524 tattttaatgaataattttgtttcacaatacttgttacttttaagtttcaatgcaacattagttattg 1749457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 14925729 - 14925617
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  |||||||| |||||||||||||||  ||||||||  |||||| ||||||| |||| |||  |||||  |||||||||||||    
T  14925729 gtttcacaatacttgtcgtttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgcaacctta--tattggtttgtcaataatac 14925632  T
Q  486 ccttgcatatttatt 500  Q
     ||| | ||||||||    
T  14925631 tcttacctatttatt 14925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 489
Target Start/End: Complemental strand, 25929365 - 25929262
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  ||||| |||||||||||||||||    ||||| | ||||||| ||||||  ||||||||| |||||  || ||||||||||    
T  25929365 gtttcacaatacttgtcgcttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaacgcaacattaaatattgatttatcaataatac 25929266  T
Q  486 cctt 489  Q
    ||||    
T  25929265 cctt 25929262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 1837860 - 1837940
Alignment:
Q  411 agaataattttgtttcacaa---tacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccct 488  Q
    |||||||||||||||||  |   ||||||||||||| || ||||||| |||||||||||||||  || |||||||||||||    
T  1837860 agaataattttgtttcaataatttacttgtcacttttaagtttcaatgcaacattaattattgatttatcaataataccct 1837940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 14350510 - 14350565
Alignment:
Q  412 gaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaatta 467  Q
    |||||||||||||| | | ||||||||||||| || ||||||| ||||||||||||    
T  14350510 gaataattttgttttatattacttgtcactttaaagtttcaatgcaacattaatta 14350565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 11248820 - 11248885
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    |||| |||||||| |||||||||||||||| | |||| |||||| || ||||||||  ||||||||    
T  11248820 tgtcgctttcaaagttcaatacaacattaaatgttgttttgtcattattacccttgattatttatt 11248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 428 - 315
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  428 gtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaataatac 330  T
Q  486 ccttgcatatttatt 500  Q
    |||||||||||||||    
T  329 ccttgcatatttatt 315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 287 - 391
Alignment:
Q  396 acttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatat 495  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| | || |||||    
T  287 acttgtccattttagagaataattttgtttcacaatacttgtcacttttaaattttaatgcaacattaattattgtcttgtcaataatatcattacatat 386  T
Q  496 ttatt 500  Q
    |||||    
T  387 ttatt 391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 45720 - 45606
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||| || |||||||||     
T  45720 gtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtattatcaataataa 45621  T
Q  486 ccttgcatatttatt 500  Q
    ||||  |||||||||    
T  45620 ccttaaatatttatt 45606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 410 - 489
Target Start/End: Original strand, 65199 - 65278
Alignment:
Q  410 gagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataataccctt 489  Q
    |||||||||||||||||| | ||||||||||||| |||||||||| ||| |||||||||||  |||||||||||||||||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgcaatattaattattggtttgtcaataataccctt 65278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 7935 - 7821
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  ||||| |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||||||| |  |||||||||||||    
T  7935 gtttcacaatacttgtcgtttttaaagaataattttaattcacattacttgtcactttcaagttttaatgcaacattaattatcggtttgtcaataatac 7836  T
Q  486 ccttgcatatttatt 500  Q
     ||| | ||||||||    
T  7835 tcttacctatttatt 7821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 6911 - 7024
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  |||| |||||||||||||||||| | || |||||  ||| || ||||||| ||||||||||||||| | ||||||||||||    
T  6911 gtttcacaatacttgtcgtttttggagaataattttgtttcatattatttgtccgttt-aagtttcaatgcaacattaattattgacgtgtcaataatac 7009  T
Q  486 ccttgcatatttatt 500  Q
     ||| | ||||||||    
T  7010 tcttacttatttatt 7024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 71350 - 71236
Alignment:
Q  386 gtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    |||||| ||||||||||  ||||  ||||||||||| ||||||| ||||||||||||| || ||| ||| ||| |||||||||||  |||| ||| ||||    
T  71350 gtttcacaatacttgtcgtttttgaagaataattttatttcacattacttgtcacttttaagtttgaatgcaaaattaattattggtttgttaattatac 71251  T
Q  486 ccttgcatatttatt 500  Q
    |||| | ||||||||    
T  71250 ccttacctatttatt 71236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 23175 - 23240
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||||||||||||| | |||| |||||| || ||||||||  ||||||||    
T  23175 tgtcactttcaaagttcaatacaacattaaatgttgttttgtcattattacccttggttatttatt 23240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 252633 - 252698
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||||||||||||| |||||| |||||  || ||||||||  ||||||||    
T  252633 tgtcactttcaaagttcaatacaacattaaatattgttttgtctttattacccttgattatttatt 252698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 1036 - 1106
Alignment:
Q  399 tgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    ||||| ||||| |||||||||||||||||   ||  ||||| ||||||| |||||||||||||||| ||||    
T  1036 tgtcttttttaaagaataattttgtttcaatttaactgtcattttcaaagttcaatacaacattaaatatt 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 6593 - 6523
Alignment:
Q  399 tgtctattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattatt 469  Q
    ||||| ||||| |||||||||||||||||   ||  ||||| ||||||| |||||||||||||||| ||||    
T  6593 tgtcttttttaaagaataattttgtttcaatttaactgtcattttcaaagttcaatacaacattaaatatt 6523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 485
Target Start/End: Original strand, 15351 - 15432
Alignment:
Q  404 attttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatac 485  Q
    ||||||| ||| ||| |||||||||  ||| ||| ||||| || ||||||| ||||||||||||| |  |||||||||||||    
T  15351 attttagtgaacaatattgtttcactttacatgtaacttttaagtttcaatgcaacattaattatcggtttgtcaataatac 15432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 147330 - 147265
Alignment:
Q  435 tgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||||||| |||||| ||||||||| | |||| || |||||| |||||||  |||||||||    
T  147330 tgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattacccttagatatttatt 147265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 500
Target Start/End: Original strand, 369448 - 369509
Alignment:
Q  439 actttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttatt 500  Q
    ||||||||| |||||||||||||||| | |||| |||||| || ||||||||  ||||||||    
T  369448 actttcaaagttcaatacaacattaaatgttgttttgtcattattacccttggttatttatt 369509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University