View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6892_low_20 (Length: 326)
Name: NF6892_low_20
Description: NF6892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6892_low_20 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 201977 - 201663
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201977 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
201878 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
201877 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
201778 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201777 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
201678 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
201677 |
aacaaagtcttgatg |
201663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 316814 - 316500
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316814 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
316715 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
316714 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
316615 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316614 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
316515 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
316514 |
aacaaagtcttgatg |
316500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 43811776 - 43811462
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43811776 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
43811677 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
43811676 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattttg |
43811577 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43811576 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
43811477 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
43811476 |
aacaaagccttgatg |
43811462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 30410096 - 30409782
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30410096 |
tcaagagcctttggtttcattctaaggggtaatcaagatcttcaatcacgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
30409997 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30409996 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
30409897 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30409896 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
30409797 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30409796 |
aacaaagtcttgatg |
30409782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 12 - 315
Target Start/End: Original strand, 41945691 - 41945994
Alignment:
| Q |
12 |
tggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacacac |
111 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
41945691 |
tggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgaaggaagaaacgttgaaggtgacaccatgaatggtagcagcaatttcaacacac |
41945790 |
T |
|
| Q |
112 |
atcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcaggatggtgt |
211 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||| ||||||| |
|
|
| T |
41945791 |
gtcttccaattcttgaagcacgcaattgtgaaagatggagtgcagtgatgaagaatatgtttgaagcacaagatttgctggaaattgtgcagaatggtgt |
41945890 |
T |
|
| Q |
212 |
acatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtctt |
311 |
Q |
| |
|
| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41945891 |
agatgaattagctgcgaataccactgatgtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctcttttcttgattcaacaaagtctt |
41945990 |
T |
|
| Q |
312 |
gatg |
315 |
Q |
| |
|
|||| |
|
|
| T |
41945991 |
gatg |
41945994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 1286984 - 1287190
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
1286984 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgaaggaagaaacgctgaaggaaacaccatgaatgat---agcag |
1287080 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||||| || |
|
|
| T |
1287081 |
tttcaacactcatcttccaattcttggagcaagaaattgggaaagatggagtacaatgatgaagaatctgtttggagcacaagatttgctggaaattatg |
1287180 |
T |
|
| Q |
201 |
caggatggtg |
210 |
Q |
| |
|
||| |||||| |
|
|
| T |
1287181 |
cagaatggtg |
1287190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 17786042 - 17785922
Alignment:
| Q |
82 |
ccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcaca |
181 |
Q |
| |
|
||||||||| |||||| ||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
17786042 |
ccatgaatgatagcagtagttttaacactcatcttccaattcttgaaggacaaaattgggaaagatggagtgcagtgatgaagaatctttttggggcaca |
17785943 |
T |
|
| Q |
182 |
agatctgttggaaattgtgca |
202 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
17785942 |
agattggttggaaattgtgca |
17785922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 1287407 - 1287505
Alignment:
| Q |
217 |
aattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
|||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1287407 |
aattagttgagaatgccactgaggtgcaaaggaacgcacacaaggaatataagaagaaagattgcaaggctttgttcttgattcaacaaagtcttgatg |
1287505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 28647027 - 28647089
Alignment:
| Q |
253 |
cacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28647027 |
cacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
28647089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28644944 - 28644993
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacg |
50 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
28644944 |
tcaagagcctttggtttcgttctaaggggttatcaagatcttcaatcacg |
28644993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 44913251 - 44913175
Alignment:
| Q |
232 |
ctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagt |
308 |
Q |
| |
|
||||||||||||| ||||| ||| |||| ||||| |||||||| || |||||||| || ||||| |||||||||||| |
|
|
| T |
44913251 |
ctactgaggtgcagaggaatgcatacaaagaatttaagaagaaggactgcaaggcacttttcttcattcaacaaagt |
44913175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 300; Significance: 1e-169; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 4 - 315
Target Start/End: Original strand, 44147425 - 44147736
Alignment:
| Q |
4 |
agagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44147425 |
agagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
44147524 |
T |
|
| Q |
104 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcag |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44147525 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtgcag |
44147624 |
T |
|
| Q |
204 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
303 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44147625 |
gatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
44147724 |
T |
|
| Q |
304 |
aaagtcttgatg |
315 |
Q |
| |
|
|||||||||||| |
|
|
| T |
44147725 |
aaagtcttgatg |
44147736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 27186503 - 27186817
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27186503 |
tcaagagcctttggtttcgttctaaggggttatcaagatcttcaatcatgcaatttgaaggaagaaacgttgaaggaaacaccatgaatggtagcagcag |
27186602 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
27186603 |
tttcaacacacatctttcaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctatttggagcacaagatctgttggaaattatg |
27186702 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27186703 |
cagaatggtgtagatgaattagctatgaatgccactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
27186802 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
27186803 |
aacaaagtcttgatg |
27186817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 43683472 - 43683158
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| || |||||| ||||||| ||||||||||||||||||||| || |
|
|
| T |
43683472 |
tcaagagcctttgatttcgttctaaggggtaatcaagatcttcaatcatgcaatttgaaggaagaaaagctgaagaaaacaccatgaatggtagcagtag |
43683373 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | || ||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43683372 |
tttcaacactcatcttccaattcttgaagcaagaaactggaaatgatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
43683273 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| ||| |||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43683272 |
cagaatgatgtagttgaattagctccgaatgccactgaggtgcaaaggaacacacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
43683173 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
43683172 |
aacaaagtcttgatg |
43683158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 31355043 - 31355357
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| |||| |||||||||||| || |
|
|
| T |
31355043 |
tcaagagcctgtggtttcgttctaaagggtaatcaagatcttcaatcacgcaatttgaaggaagaaacgttgaaggaatgaccaagaatggtagcagtag |
31355142 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | || ||||||||||||| |||| |||||||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
31355143 |
tttcaacactcatcttccaattcttgaagcaagaaactgggaaagatggaatgcactgatgaagaatcagtttggagcacaagatttgctggaaattgtg |
31355242 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31355243 |
cagaatggtgtagatgaattagctgtgaatgccactaaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
31355342 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
31355343 |
aacaaagtcttgatg |
31355357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 315
Target Start/End: Original strand, 20289946 - 20290180
Alignment:
| Q |
81 |
accatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcac |
180 |
Q |
| |
|
||||||| |||||| |||| |||||| || |||||||||| |||||| | | | ||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
20289946 |
accatgattggtagtagcaatttcaatactcatcttccaagtcttgatggaagaaattgggaaagatggagtgttgtgatgaagaatctgtttgaggcac |
20290045 |
T |
|
| Q |
181 |
aagatctgttggaaattgtgcaggatggtgtaca-tgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagatt |
279 |
Q |
| |
|
||||| | ||||| |||||||| | ||| |||| ||| ||| ||| ||||| ||||| ||||| ||||| ||||| || || || |||||||| |||| |
|
|
| T |
20290046 |
aagatttattggagattgtgcaaaacggt-tacattgatataggtgctaatgcaactgaagtgcataggaatgcacataaagagttaaagaagaaggatt |
20290144 |
T |
|
| Q |
280 |
gcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
|||||| ||||| | |||||| | |||||||||| |
|
|
| T |
20290145 |
gcaaggaattgttcctcattcaatagagtcttgatg |
20290180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 53977255 - 53977394
Alignment:
| Q |
63 |
agaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatga |
162 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||| | |||||| ||||| |||||| | |||||||| ||| ||| ||| ||||||||| |
|
|
| T |
53977255 |
agaaacactgaaggagtaaccatgaatggtagcaatagtttcaaccctcatctttcaatttttgaaggatgcaattggaaaatatgaagtccagtgatga |
53977354 |
T |
|
| Q |
163 |
agaatctgtttggagcacaagatctgttggaaattgtgca |
202 |
Q |
| |
|
|||| |||||||||||||| || ||||||| || ||||| |
|
|
| T |
53977355 |
agaacttgtttggagcacaatatttgttggagatagtgca |
53977394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 12103119 - 12103068
Alignment:
| Q |
134 |
caattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagat |
185 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| || ||||||||||||||| |
|
|
| T |
12103119 |
caattggaaaagatggagtgcattgatgaagacactctttggagcacaagat |
12103068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 53977466 - 53977529
Alignment:
| Q |
252 |
gcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
|||||||| || || |||||||| |||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
53977466 |
gcacacaaagatttaaagaagaaggattgcaaggctttatttctgattcaacaaagtcttgatg |
53977529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 299; Significance: 1e-168; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 7103667 - 7103353
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7103667 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcag |
7103568 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7103567 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
7103468 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7103467 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
7103368 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
7103367 |
aacaaagtcttgatg |
7103353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 16794533 - 16794847
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16794533 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcag |
16794632 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16794633 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
16794732 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16794733 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
16794832 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16794833 |
aacaaagtcttgatg |
16794847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 4 - 315
Target Start/End: Original strand, 37659094 - 37659405
Alignment:
| Q |
4 |
agagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37659094 |
agagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcagttt |
37659193 |
T |
|
| Q |
104 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcag |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37659194 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcggtgatgaagaatctgtttggagcacaagacctgttggaaattgtgcag |
37659293 |
T |
|
| Q |
204 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37659294 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
37659393 |
T |
|
| Q |
304 |
aaagtcttgatg |
315 |
Q |
| |
|
|||||||||||| |
|
|
| T |
37659394 |
aaagtcttgatg |
37659405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 4 - 315
Target Start/End: Original strand, 12019156 - 12019467
Alignment:
| Q |
4 |
agagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12019156 |
agagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcagttt |
12019255 |
T |
|
| Q |
104 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcag |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12019256 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcggtgatgaagaatctgtttggagcacaagacctgttggaaattgtgcag |
12019355 |
T |
|
| Q |
204 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12019356 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
12019455 |
T |
|
| Q |
304 |
aaagtcttgatg |
315 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12019456 |
aaagtcttgatg |
12019467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 10274901 - 10275215
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10274901 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgaaggaagaaacactgaaggaaacaccatgaatggtagcagcag |
10275000 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10275001 |
tttcaacaaacatcttccaattcttgaagcacgcaattgggaaagatggaatgcggtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
10275100 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10275101 |
cagaatggtgtagatgaattagctgcgaatgccactgaggtgcaaaggaacgcacacaaggagttgaagaagaaagattgcaaggctctgttcttgattc |
10275200 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10275201 |
aacaaagtcttgatg |
10275215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 30695660 - 30695974
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30695660 |
tcaagagcctttggtttcattctaaggggtaatcaagatcttcaatcacgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
30695759 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
30695760 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
30695859 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| || ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30695860 |
cagaatagtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
30695959 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30695960 |
aacaaagtcttgatg |
30695974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 40371540 - 40371226
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40371540 |
tcaagtgcctttggtttcgttctaaggggttatcaagatcttcaatcacgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
40371441 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
40371440 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtggtgaagaatctgtttggagcacaagatttgcttgaaattgtg |
40371341 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40371340 |
cagaatggtgtaggtgaattagctgcgaatgccactgaagtacaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
40371241 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
40371240 |
aacaaagtcttgatg |
40371226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 315
Target Start/End: Complemental strand, 15067017 - 15066787
Alignment:
| Q |
84 |
atgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaag |
183 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| | | || ||||||||||||||| | ||||||||| |||||||| ||||| | |
|
|
| T |
15067017 |
atgaatggtagcagcagtttcaatacacatcttccaattcttgaaggaagaaactgggaaagatggagtacttcgatgaagaacctgtttggggcacacg |
15066918 |
T |
|
| Q |
184 |
atctgttggaaattgtgcaggatggtgtac-atgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgca |
282 |
Q |
| |
|
|| |||||||||||||||| || |||| |||| |||| ||| ||||| || || || |||||||| || ||||| ||||| |||||||| ||| | | |
|
|
| T |
15066917 |
atttgttggaaattgtgca-aatcaggtacaatgatttagatgc-aatgcaaccgaagttcaaaggaatgcgcacaaagaattaaagaagaaggatcgta |
15066820 |
T |
|
| Q |
283 |
aggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| |
|
|
| T |
15066819 |
aggctttgttcctgattcaacaaagtcttgatg |
15066787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 16598543 - 16598431
Alignment:
| Q |
81 |
accatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcac |
180 |
Q |
| |
|
||||||||||||||||||| |||||| || ||||||||||||||||||| | ||||||||||||||||| | |||||||||||| ||||||| |||| |
|
|
| T |
16598543 |
accatgaatggtagcagcattttcaatactcatcttccaattcttgaaggtggaaattgggaaagatggagagatgtgatgaagaatatgtttggggcac |
16598444 |
T |
|
| Q |
181 |
aagatctgttgga |
193 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
16598443 |
aagatctattgga |
16598431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 8051256 - 8051570
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8051256 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcag |
8051355 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8051356 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
8051455 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8051456 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
8051555 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8051556 |
aacaaagtcttgatg |
8051570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 36670915 - 36671229
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36670915 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcag |
36671014 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
36671015 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
36671114 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36671115 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
36671214 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
36671215 |
aacaaagtcttgatg |
36671229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 5 - 315
Target Start/End: Complemental strand, 13270817 - 13270507
Alignment:
| Q |
5 |
gagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttc |
104 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13270817 |
gagcctttggtttcgttctaaggggttatcaagatcttcaatcacgcaatttgaaggaagaaacgctgaaggaaacaccatgaatggtagcagcagtttc |
13270718 |
T |
|
| Q |
105 |
aacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcagg |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13270717 |
aacacacatcttccaattcttgaagcacgcaattgggaaagatggggtgcaatgatgaagaatctgtttggagcacaagatctgttggaaattgtgcaaa |
13270618 |
T |
|
| Q |
205 |
atggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaaca |
304 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13270617 |
atggtgtagatgaattagctgcgaatgccactgaggtgcaaaggaacacacacaaggaattgaagaagaaagattgcaaggctctgttctttattcaaca |
13270518 |
T |
|
| Q |
305 |
aagtcttgatg |
315 |
Q |
| |
|
||||||||||| |
|
|
| T |
13270517 |
aagtcttgatg |
13270507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 29768896 - 29769176
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||| | |||||| |||||||||| | |||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
29768896 |
tcaagagcttgtggtttcgttctaagggtttatcaagatcttcaatcacgcaaattc-aggaagaaacgctgaaggaagaactatgaatggtagcagcag |
29768994 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||| ||||||| |||| |||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||| ||||| || | ||||||||| |
|
|
| T |
29768995 |
tttcaacactcatcttctaatttttgaagcacgcaattgggaaagatggagcgtagtaatgaagaacttgtttagagcataagatttgcttgaaattgtg |
29769094 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgca |
282 |
Q |
| |
|
||| | |||||| ||| |||||| |||||| || ||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
29769095 |
cagaacggtgtaggtgatttagctatgaatgccacaagagtgcaaaggaacgcacacaagaatctgaagaagaaagattgca |
29769176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 17255649 - 17255961
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| || |
|
|
| T |
17255649 |
tcaagagcctttggttctgttctaaggggtgatagagatcttcaatcacgcaatttcaaggtagaaagactgaaggagtaaccatgaatggtagcagtag |
17255748 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||||| ||| |
|
|
| T |
17255749 |
tttcaacagtcatcttccaattcttgaagcaagtaattgggaaagatggagtgcaatgatgaagaacttgtttggagcacaagatttgtcggaaatagtg |
17255848 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
| ||||||| ||| ||| | ||||| | ||| | || | |||||| |||||||| | | ||||||||||||||||||||| |||||||||||| |
|
|
| T |
17255849 |
cttaatggtgttgctgatctagttccgaattcaactaaagttcgaaggaatgcacacaaatatctcaagaagaaagattgcaaggctttgttcttgattc |
17255948 |
T |
|
| Q |
301 |
aacaaagtcttga |
313 |
Q |
| |
|
|| | |||||||| |
|
|
| T |
17255949 |
aaaatagtcttga |
17255961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 25268795 - 25268685
Alignment:
| Q |
83 |
catgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaa |
182 |
Q |
| |
|
||||||||||| || ||||||||| || ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
25268795 |
catgaatggtaacaacagtttcaatactcatcttccaattcttgaaggtggaaattgggaaagatggagtgttgtgatgaagaatctgtttggggcacaa |
25268696 |
T |
|
| Q |
183 |
gatctgttgga |
193 |
Q |
| |
|
||| ||||||| |
|
|
| T |
25268695 |
gatttgttgga |
25268685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 7944376 - 7944062
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7944376 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcag |
7944277 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7944276 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgttggaaattgtg |
7944177 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7944176 |
caggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacaaaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
7944077 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
7944076 |
aacaaagtcttgatg |
7944062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 27757261 - 27757575
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27757261 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
27757360 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
27757361 |
tttcaacacacatcttccaattcttgaagcacgtaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
27757460 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27757461 |
cagaatggtgtagatgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
27757560 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
27757561 |
aacaaagtcttgatg |
27757575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 7466333 - 7466019
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7466333 |
tcaagagcctttggttttgttctaaggggttatcaagatcttcaatcacgcaatttgaaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
7466234 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||||||| |
|
|
| T |
7466233 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtacagtgatgaagaatttgtttggagcacaagatttgcttgaaattgtt |
7466134 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||| | |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7466133 |
cagaatggtgtaggtgaattagttttgaatgccactgatgtgcaaaggaacacacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
7466034 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
7466033 |
aacaaagtcttgatg |
7466019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 195
Target Start/End: Complemental strand, 7678566 - 7678406
Alignment:
| Q |
36 |
agatcttcaatcacgcaatt-tgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgc |
134 |
Q |
| |
|
|||||||||||||||||||| | || |||||| || ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7678566 |
agatcttcaatcacgcaattatcaaggtagaaacactaaaggagtaaccatgaatggtagcagtagtttcaacactcatcttccaattcttgaagcacgc |
7678467 |
T |
|
| Q |
135 |
aattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaa |
195 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
7678466 |
aattgggaaagatggagtgtagtgatgaagaacctgtttggggcacaagatttgttggaaa |
7678406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 729900 - 729984
Alignment:
| Q |
220 |
tagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaaca |
304 |
Q |
| |
|
||||||||||||| ||||| | |||||||| | ||||| || ||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
729900 |
tagctgcgaatgcaactgaaattcaaaggaatgtgcacaaagatctgaagaagaaagattgcaaggctttattcctgattcaaca |
729984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 4 - 315
Target Start/End: Complemental strand, 49155 - 48844
Alignment:
| Q |
4 |
agagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
49155 |
agagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcagttt |
49056 |
T |
|
| Q |
104 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcag |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
49055 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcggtgatgaagaatctgtttggagcacaagacctgttggaaattgtgcag |
48956 |
T |
|
| Q |
204 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48955 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
48856 |
T |
|
| Q |
304 |
aaagtcttgatg |
315 |
Q |
| |
|
|||||||||||| |
|
|
| T |
48855 |
aaagtcttgatg |
48844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 4 - 315
Target Start/End: Complemental strand, 54171634 - 54171323
Alignment:
| Q |
4 |
agagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagttt |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
54171634 |
agagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaatcaccatgaatggtagcagcagttt |
54171535 |
T |
|
| Q |
104 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcag |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54171534 |
caacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcggtgatgaagaatctgtttggagcacaagacctgttggaaattgtgcag |
54171435 |
T |
|
| Q |
204 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaac |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
54171434 |
gatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaagaaaaaagattgcaaggctctgttcttgattcaac |
54171335 |
T |
|
| Q |
304 |
aaagtcttgatg |
315 |
Q |
| |
|
|||||||||||| |
|
|
| T |
54171334 |
aaagtcttgatg |
54171323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 21847492 - 21847806
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847492 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttatagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
21847591 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
21847592 |
tttcaacacacatcttccaattcttgaagcacgtaattgggaaagatggagtgcagcgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
21847691 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847692 |
cagaatggtgtagatgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
21847791 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21847792 |
aacaaagtcttgatg |
21847806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 9697945 - 9698259
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9697945 |
tcaagagcctttggtttcgttctaaggggttatcaagatcttcaatcatgcaatttgaaggaagaaacgttgaaggaaacaccatgaatggtagcagcag |
9698044 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
9698045 |
tttcaacacacatctttcaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctatttggagcacaagatctgttggaaattatg |
9698144 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9698145 |
cagaatggtgtagatgaattagctatgaatgccactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
9698244 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9698245 |
aacaaagtcttgatg |
9698259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 43548081 - 43548393
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43548081 |
tcaagagcctctggtttagttctaaggggttatcaagatcttcaatcacgcagtttgaaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
43548180 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
43548181 |
tttcaacacacatcttccaattcttgaggcacgccattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaatatatgtttgaaattgtg |
43548280 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43548281 |
cagaatggtgtagatgaattagctccgaatgccatagaggtgcaaaggaa--cacacaaggaattgaagaagaaagattgcaaggctgtgttcttgattc |
43548378 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
43548379 |
aacaaagtcttgatg |
43548393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 315
Target Start/End: Original strand, 756206 - 756500
Alignment:
| Q |
19 |
gttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacacacatcttcc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||| | |||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
756206 |
gttctaaggggtaatcaagatcttcaatcacgcaatttgaaggaagaaatgttgaaggaatcaccatgaatggtagcagcagtttcaacactcatcttcc |
756305 |
T |
|
| Q |
119 |
aattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaa |
218 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||| |||||||| ||||||| |||| |
|
|
| T |
756306 |
aattcttgaatcacgcaattgggaaagatggagtgcagtgatgaagaatttctttggagcacatgatttgttggaagttgtgcagaatggtgtcggtgaa |
756405 |
T |
|
| Q |
219 |
ttagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||||| |
|
|
| T |
756406 |
ttagctgcgaatgccactgatgtgcaaaggaacgaacaca--gaattgaagaagaaagattgcaaggctttgttcttgattcaatagagtcttgatg |
756500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 22931509 - 22931416
Alignment:
| Q |
82 |
ccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttgg |
175 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||| |||||| | ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
22931509 |
ccatgaatggtaacagcagtttcaatactcatcttccaacccttgaaagtggaaattgggaaagttggagtgttgtgatgaagaatctgtttgg |
22931416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 39794259 - 39794573
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39794259 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
39794358 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
39794359 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
39794458 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39794459 |
cagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
39794558 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
39794559 |
aacaaagtcttgatg |
39794573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 26311877 - 26312191
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26311877 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtaacagcag |
26311976 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
26311977 |
tttcaacacacatattccaattcttgaagcacgcaattgggaaagatggagtgtagtgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
26312076 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26312077 |
cagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacacacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
26312176 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26312177 |
aacaaagtcttgatg |
26312191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 31961575 - 31961655
Alignment:
| Q |
99 |
agtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagca |
179 |
Q |
| |
|
||||||||||| |||||| ||| |||||||| | | |||||||||||| |||||||||||||||||| | ||||||||||| |
|
|
| T |
31961575 |
agtttcaacactcatctttcaaatcttgaaggaagaaattgggaaagaaggagtgcagtgatgaagagtttgtttggagca |
31961655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 26628358 - 26628307
Alignment:
| Q |
134 |
caattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagat |
185 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
26628358 |
caattgggaaagatggagtgcactgatgaagttactttttggagcacaagat |
26628307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 8319797 - 8319483
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8319797 |
tcaagagcctttggtttcgttctaaggggtaatcaagatcttcaatcacgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagcagcag |
8319698 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
8319697 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgcttgaaattgtg |
8319598 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8319597 |
cagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
8319498 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8319497 |
aacaaagtcttgatg |
8319483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 14531598 - 14531284
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| || ||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
14531598 |
tcaagagcctgtggtttcgttctaaggggttatcaagatcttcaatcacgctatttgaaggaagaaacactaaaggaaacaccatgaatggtagcagcag |
14531499 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14531498 |
tttcaacacacatcttctaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
14531399 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
14531398 |
cagaatggtgttaatgaattagctgcgaatgccactgaggtgcaaaggaacgcacacaaggaattgaagaagaatgattgcaagactatgttcttgattc |
14531299 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14531298 |
aacaaagtcttgatg |
14531284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 21416899 - 21416585
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| || |||||| ||| |||||||||||| ||||||||||| || |
|
|
| T |
21416899 |
tcaagagcctttggtttcgttctaaggggttatcaatatcttcaatcacgcaatttgaaggaagaaatgcttaaggaaacaccacgaatggtagcaatag |
21416800 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
21416799 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatttgtttggagcacaagatctgttgaaaattgtg |
21416700 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21416699 |
cagaatggtgtagatgaatcatctgcgaatgccactgaggtgcaaaggaacgcacacaaggaatttaagaagaaagattgcaaggctctgttcttgattc |
21416600 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21416599 |
aacaaagtcttgatg |
21416585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 27574498 - 27574266
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaat---cacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcag |
97 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27574498 |
tcaagagcctttggtttcgttctaaggggttatcaagatcttcaataatcatgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagcag |
27574399 |
T |
|
| Q |
98 |
cagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaatt |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |||||| |
|
|
| T |
27574398 |
cagtttcaacacacatcttccaattcttgaagcacgcaattggaaaagatggagtgcagtgatgaagaatctgtttggagcacaagatttgcttgaaatt |
27574299 |
T |
|
| Q |
198 |
gtgcaggatggtgtacatgaattagctgcgaat |
230 |
Q |
| |
|
||||| |||||||| |||||||||||||||| |
|
|
| T |
27574298 |
gtgcataatggtgtaggtgaattagctgcgaat |
27574266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 17159958 - 17160271
Alignment:
| Q |
1 |
tcaagagcctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcag |
100 |
Q |
| |
|
||||||||| |||||| | || |||||||||||||||||||||||||||||| || || |||||||| |||||||| |||||||||||||||| ||| |
|
|
| T |
17159958 |
tcaagagcccgtggtttcgatcaaaggggtaatcaagatcttcaatcacgcaaattc-aggaagaaacgatgaaggaagaaccatgaatggtagcatcag |
17160056 |
T |
|
| Q |
101 |
tttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaattgtg |
200 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||| || | ||| ||||| |
|
|
| T |
17160057 |
tttcaacactcatctttcaattcttgaagcacgcaattgggaaagatggagtgaagtgatgaagaacttgttttgagcagtagatttgcttgaagttgtg |
17160156 |
T |
|
| Q |
201 |
caggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattc |
300 |
Q |
| |
|
||| |||||||| ||| |||||||||||||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
17160157 |
cagaatggtgtaggtgatttagctgcgaatgccacaaaagtgcaaaggaacgcacacaaggatctgaagaagaaatattgcaaggctttgttcttgattc |
17160256 |
T |
|
| Q |
301 |
aacaaagtcttgatg |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
17160257 |
aacaaagtcttgatg |
17160271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 17895508 - 17895349
Alignment:
| Q |
8 |
cctttggttttgttctaaggggtaatcaagatcttcaatcacgcaatttgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaac |
107 |
Q |
| |
|
|||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17895508 |
cctttgatttcgttctaaggggttatcaagatcttcaatcacgcaatttgtaggaagaaacgctgaaggaaacaccatgaatggtagtagcagtttcaac |
17895409 |
T |
|
| Q |
108 |
acacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaat |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17895408 |
acacatcttccaattcttgaagcacgcaattgggaaagatggagtgcggtgatgaagaat |
17895349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 162 - 315
Target Start/End: Complemental strand, 17881611 - 17881458
Alignment:
| Q |
162 |
aagaatctgtttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaagg |
261 |
Q |
| |
|
|||||||||||||||||||||| | || | |||||||||||| |||||||| |||||||| || |||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
17881611 |
aagaatctgtttggagcacaagttttgcttgaaattgtgcagaatggtgtaggtgaattagttgtgaatgccactgatgtgcaaaggaacgcacataagg |
17881512 |
T |
|
| Q |
262 |
aattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
17881511 |
aattgatgaagaaagattgcaaggctttgttcttgattcaacaaagtcttgatg |
17881458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 27571801 - 27571711
Alignment:
| Q |
225 |
gcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27571801 |
gcgaatgtcactgaagtgaaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctattcttgattcaacaaagtcttgatg |
27571711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 23253998 - 23254231
Alignment:
| Q |
82 |
ccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgcaattgggaaagatggagtgcagtgatgaagaatctgtttggagcaca |
181 |
Q |
| |
|
||||||||| |||| | | ||||||||| ||| ||| ||||||| ||| | | |||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23253998 |
ccatgaatgatagcggtaatttcaacactcattttctaattcttaaaggatgaaattgggaaacatgtagtgcagtgatgaagaatctgtttggagcaca |
23254097 |
T |
|
| Q |
182 |
agatctgttggaaattgtgcaggatggtgtac-atgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattg |
280 |
Q |
| |
|
|||| | || ||||| |||| ||||| ||| |||| |||||||| ||||| | ||| | |||||||| || ||||| ||||| || ||||| |||| |
|
|
| T |
23254098 |
agattttttcgaaatattgcaaaatggt-tacaatgatttagctgcaaatgcaaatgatattcaaaggaatgcgcacaaagaattaaaaaagaaggattt |
23254196 |
T |
|
| Q |
281 |
caaggctctgttcttgattcaacaaagtcttgatg |
315 |
Q |
| |
|
||||||| ||| | |||||||| | ||| |||||| |
|
|
| T |
23254197 |
caaggctttgtacctgattcaatatagtattgatg |
23254231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 3595625 - 3595744
Alignment:
| Q |
12 |
tggttttgttctaaggggtaatcaagatcttcaatcacgcaatt-tgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacaca |
110 |
Q |
| |
|
||||||||||||||||||| || ||| |||||||||||||||| | || |||||| ||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
3595625 |
tggttttgttctaaggggtgatagagaacttcaatcacgcaattatcaaggtagaaacattgaaggagtgaccatgaatggtagtagtagtttcaacact |
3595724 |
T |
|
| Q |
111 |
catcttccaattcttgaagc |
130 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
3595725 |
catcttccagttcttgaagc |
3595744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 112367 - 112527
Alignment:
| Q |
36 |
agatcttcaatcacgcaatt-tgtagaaagaaacgctgaaggaaacaccatgaatggtagcagcagtttcaacacacatcttccaattcttgaagcacgc |
134 |
Q |
| |
|
|||||||||||||||||||| | || |||||| ||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
112367 |
agatcttcaatcacgcaattatcaaggtagaaacattgaaggattaaccatgaatggtaacaatagtttcaacactcatcttccaattcttgaagcacgc |
112466 |
T |
|
| Q |
135 |
aattgggaaagatggagtgcagtgatgaagaatctgtttggagcacaagatctgttggaaa |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
112467 |
aattgggaaagatggagtgcagtgatgaagaacctgtttggggcacaagatttgttggaaa |
112527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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