View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6892_low_24 (Length: 249)

Name: NF6892_low_24
Description: NF6892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6892_low_24
NF6892_low_24
[»] chr3 (24 HSPs)
chr3 (66-249)||(5301947-5302130)
chr3 (87-236)||(10876151-10876300)
chr3 (1-60)||(8073258-8073317)
chr3 (1-69)||(3953807-3953875)
chr3 (1-60)||(27078487-27078546)
chr3 (1-60)||(27084284-27084343)
chr3 (1-60)||(29620365-29620424)
chr3 (1-60)||(36715943-36716002)
chr3 (1-60)||(38681012-38681071)
chr3 (1-60)||(47467812-47467871)
chr3 (127-225)||(24678127-24678225)
chr3 (1-58)||(36606092-36606149)
chr3 (1-60)||(21582900-21582959)
chr3 (1-60)||(54619122-54619181)
chr3 (1-57)||(37168495-37168551)
chr3 (1-60)||(34290555-34290614)
chr3 (1-60)||(42098929-42098988)
chr3 (1-60)||(43207158-43207217)
chr3 (1-60)||(48720430-48720489)
chr3 (1-60)||(50258543-50258602)
chr3 (1-60)||(54407074-54407133)
chr3 (1-60)||(50939153-50939212)
chr3 (1-49)||(18372610-18372658)
chr3 (1-57)||(44708604-44708660)
[»] chr1 (23 HSPs)
chr1 (72-236)||(19242383-19242547)
chr1 (1-60)||(17169091-17169150)
chr1 (1-58)||(50881564-50881621)
chr1 (1-60)||(6771929-6771988)
chr1 (1-60)||(14146435-14146494)
chr1 (1-60)||(27906647-27906706)
chr1 (1-60)||(44655876-44655935)
chr1 (1-60)||(22865379-22865438)
chr1 (1-55)||(34247162-34247216)
chr1 (1-60)||(5027686-5027745)
chr1 (1-60)||(5316815-5316874)
chr1 (1-60)||(9172941-9173000)
chr1 (1-60)||(9180923-9180982)
chr1 (1-60)||(21740853-21740912)
chr1 (1-60)||(23185562-23185621)
chr1 (1-60)||(40501708-40501767)
chr1 (1-56)||(51607363-51607418)
chr1 (1-55)||(16140190-16140244)
chr1 (1-60)||(3406554-3406613)
chr1 (1-60)||(3440207-3440266)
chr1 (1-60)||(6889745-6889804)
chr1 (1-60)||(6891591-6891650)
chr1 (1-60)||(19955852-19955911)
[»] chr7 (15 HSPs)
chr7 (1-60)||(18776684-18776743)
chr7 (125-236)||(20528464-20528575)
chr7 (1-60)||(29077344-29077403)
chr7 (1-58)||(8171460-8171517)
chr7 (1-60)||(12596208-12596267)
chr7 (1-60)||(25010551-25010610)
chr7 (1-60)||(26254118-26254177)
chr7 (1-55)||(40357303-40357357)
chr7 (1-60)||(10329328-10329387)
chr7 (1-60)||(20091198-20091257)
chr7 (1-59)||(8239811-8239869)
chr7 (1-60)||(23550989-23551048)
chr7 (1-60)||(24525600-24525659)
chr7 (13-60)||(28749847-28749894)
chr7 (1-60)||(48983757-48983816)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-60)||(1467-1526)
[»] chr8 (13 HSPs)
chr8 (1-60)||(2952138-2952197)
chr8 (1-60)||(3048436-3048495)
chr8 (1-60)||(37430077-37430136)
chr8 (1-60)||(42600907-42600966)
chr8 (1-58)||(30883455-30883512)
chr8 (1-60)||(41879304-41879363)
chr8 (1-58)||(13534609-13534666)
chr8 (1-58)||(13624149-13624206)
chr8 (1-60)||(20003729-20003788)
chr8 (1-60)||(23606549-23606608)
chr8 (1-60)||(23798180-23798239)
chr8 (1-60)||(45475941-45476000)
chr8 (1-50)||(5860671-5860720)
[»] chr6 (12 HSPs)
chr6 (1-60)||(13727318-13727377)
chr6 (1-60)||(21280673-21280732)
chr6 (1-60)||(17354082-17354141)
chr6 (1-60)||(21479623-21479682)
chr6 (1-60)||(27788609-27788668)
chr6 (1-60)||(30832444-30832503)
chr6 (2-55)||(19987277-19987330)
chr6 (1-60)||(20711639-20711698)
chr6 (1-60)||(24710915-24710974)
chr6 (1-60)||(27314098-27314157)
chr6 (1-59)||(1155767-1155825)
chr6 (1-61)||(33774246-33774306)
[»] chr5 (16 HSPs)
chr5 (1-60)||(36187796-36187855)
chr5 (1-60)||(15480007-15480066)
chr5 (1-53)||(34756289-34756341)
chr5 (1-60)||(16799241-16799300)
chr5 (1-60)||(27079137-27079196)
chr5 (1-60)||(38869280-38869339)
chr5 (1-57)||(19523324-19523380)
chr5 (1-56)||(2275015-2275070)
chr5 (1-60)||(7671058-7671117)
chr5 (1-60)||(16198710-16198769)
chr5 (1-60)||(28822253-28822312)
chr5 (1-60)||(31194529-31194588)
chr5 (1-53)||(40389461-40389513)
chr5 (1-60)||(22986474-22986533)
chr5 (1-60)||(23283944-23284003)
chr5 (1-58)||(30854454-30854511)
[»] chr2 (17 HSPs)
chr2 (1-60)||(3155341-3155400)
chr2 (1-60)||(4506018-4506077)
chr2 (1-58)||(6965129-6965186)
chr2 (1-60)||(12337366-12337425)
chr2 (1-60)||(3953128-3953187)
chr2 (1-60)||(8906997-8907056)
chr2 (173-224)||(16485936-16485987)
chr2 (1-58)||(34694098-34694155)
chr2 (1-58)||(34716510-34716567)
chr2 (1-57)||(40636261-40636317)
chr2 (1-60)||(1396618-1396677)
chr2 (1-60)||(27506660-27506719)
chr2 (1-56)||(29939786-29939841)
chr2 (1-55)||(5952642-5952696)
chr2 (1-60)||(24410563-24410622)
chr2 (1-60)||(26716253-26716312)
chr2 (1-58)||(10762488-10762545)
[»] chr4 (27 HSPs)
chr4 (1-57)||(47129116-47129172)
chr4 (1-60)||(16882314-16882373)
chr4 (1-60)||(32915515-32915574)
chr4 (1-60)||(55255387-55255446)
chr4 (1-60)||(34027708-34027767)
chr4 (1-60)||(54780908-54780967)
chr4 (1-57)||(1105661-1105717)
chr4 (1-60)||(5128759-5128818)
chr4 (1-60)||(10428117-10428176)
chr4 (1-60)||(32128714-32128773)
chr4 (1-60)||(37777141-37777200)
chr4 (1-60)||(40089654-40089713)
chr4 (1-60)||(48209376-48209435)
chr4 (1-60)||(54083161-54083220)
chr4 (1-55)||(38352189-38352243)
chr4 (16-60)||(16845165-16845209)
chr4 (1-49)||(38209520-38209568)
chr4 (1-60)||(2790660-2790719)
chr4 (1-60)||(10979032-10979091)
chr4 (1-60)||(17679529-17679588)
chr4 (1-60)||(19498631-19498690)
chr4 (1-60)||(24969726-24969785)
chr4 (1-60)||(34768493-34768552)
chr4 (6-60)||(13460305-13460359)
chr4 (1-47)||(43455463-43455509)
chr4 (1-50)||(35465235-35465284)
chr4 (1-58)||(35779248-35779305)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-60)||(106663-106722)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-60)||(183184-183243)


Alignment Details
Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 5302130 - 5301947
Alignment:
Q  66 tcacaccatattagttaaagaaggattacttacgtagcaagtaatcattagactgttaggtagttagttagagaatgattatttgtgcaacaagtattca 165  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5302130 tcacaccatatcagttaaagaaggattacttgcgtagcaagtaatcattagactgttaggtagttagttagagaatgattatttgtgcaacaagtattca 5302031  T
Q  166 ttagatggttaagagttagcgatcttgtgtttgctacacataataagctaacatagagacgcttttgtgtagacattcaacttc 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||    
T  5302030 ttagatagttaagagttagcgatcttgtgtttgctacacataataagctaacatggagacactcttgtgtacacattcaacttc 5301947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 10876300 - 10876151
Alignment:
Q  87 aggattacttacgtagcaagtaatcattagactgttaggtagttagttagagaatgattatttgtgcaacaagtattcattagatggttaagagttagcg 186  Q
    |||||||||| || |||||||||||||||||| || ||  | || ||||||||||||||| |||||||||||||| |||||| || ||||||| |||| |    
T  10876300 aggattacttgcgcagcaagtaatcattagacagtaagaaaatttgttagagaatgattacttgtgcaacaagtaatcattatatagttaagacttagtg 10876201  T
Q  187 atcttgtgtttgctacacataataagctaacatagagacgcttttgtgta 236  Q
    || ||||||||| |||||||  ||||||||||||||||| || |||||||    
T  10876200 atattgtgtttgttacacatggtaagctaacatagagacactcttgtgta 10876151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8073317 - 8073258
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8073317 tttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 8073258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3953875 - 3953807
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccctagatatcac 69  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| |||||||    
T  3953875 tttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccctacatatcac 3953807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27078546 - 27078487
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  27078546 tttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccct 27078487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27084343 - 27084284
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  27084343 tttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccct 27084284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29620424 - 29620365
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  29620424 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 29620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36716002 - 36715943
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36716002 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 36715943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38681071 - 38681012
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  38681071 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 38681012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47467812 - 47467871
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  47467812 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 47467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 24678127 - 24678225
Alignment:
Q  127 agttagttagagaatgattatttgtgcaacaagtattcattagatggttaagagttagcgatcttgtgtttgctacacataataagctaacatagagac 225  Q
    ||||||||||||||||||||  |||| || ||| | |||||| || ||||||||||||||||||  ||||||  ||||||||||||||||||| |||||    
T  24678127 agttagttagagaatgattacgtgtgtaataaggaatcattaaatagttaagagttagcgatctcatgtttgtcacacataataagctaacatcgagac 24678225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36606092 - 36606149
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  36606092 tttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21582900 - 21582959
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | | |||||| |||||||||||||||||||||||||    
T  21582900 tttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccct 21582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54619181 - 54619122
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||| || | |||||||||||| |||||||| |||||||||||||||||||||||||    
T  54619181 tttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccct 54619122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37168495 - 37168551
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| |||||||||    
T  37168495 tttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34290614 - 34290555
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||| | ||||||||||    
T  34290614 tttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccct 34290555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42098929 - 42098988
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||||  |||| || ||| |||||||||||||||||||||    
T  42098929 tttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccct 42098988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43207217 - 43207158
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| ||||| |||||| ||||||||||||    
T  43207217 tttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 43207158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48720489 - 48720430
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||| ||||||||||||| | |||||||| ||||| |||||| ||||||||||||    
T  48720489 tttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccct 48720430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50258602 - 50258543
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||| |||||||| || | |||||||| |||||||||||||||| ||||||||    
T  50258602 tttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccct 50258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54407133 - 54407074
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||| | |||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  54407133 tttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 54407074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50939212 - 50939153
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| || ||||||||| ||||||||||||    
T  50939212 tttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccct 50939153  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18372610 - 18372658
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctca 49  Q
    ||||||||||||||||||||||| | || | ||| ||||||||||||||    
T  18372610 tttatcactgacctcttttcattcccagtgtcgagcctccgaattctca 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44708604 - 44708660
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    |||||||||| |||||||||||| | ||||  || |||||||||||| |||||||||    
T  44708604 tttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggc 44708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 19242383 - 19242547
Alignment:
Q  72 catattagttaaagaaggattacttacgtagcaagtaatcattagactgttaggtagttagttagagaatgattatttgtgcaacaagtattcattagat 171  Q
    ||||| |||||| ||||||||||||  |||||||||||||||||||  |||| | |||||||||||||||||| |  ||||||||||||| |||| || |    
T  19242383 catatcagttaaggaaggattacttgtgtagcaagtaatcattagatagttacgcagttagttagagaatgatgacatgtgcaacaagtaatcatgagtt 19242482  T
Q  172 ggttaagagttagcgatcttgtgtttgctacacataataagctaacatagagacgcttttgtgta 236  Q
     |||||||||||   | |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  19242483 agttaagagttaataagcttgtgtttgttacacataataagctaacatagagacacttttgtgta 19242547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17169091 - 17169150
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  17169091 tttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccct 17169150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50881564 - 50881621
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  50881564 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6771929 - 6771988
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  6771929 tttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 6771988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14146435 - 14146494
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  14146435 tttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccct 14146494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27906706 - 27906647
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||    
T  27906706 tttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 27906647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44655876 - 44655935
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  44655876 tttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccct 44655935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22865438 - 22865379
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||| ||||||||||||||| | |||||||  |||||||||||||||||||||||||    
T  22865438 tttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccct 22865379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34247162 - 34247216
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  34247162 tttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 34247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5027686 - 5027745
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| |  ||| ||| |||||||||||||||||||||||||    
T  5027686 tttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccct 5027745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5316815 - 5316874
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| |||  | ||| ||||| |||||||||||||||||||    
T  5316815 tttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccct 5316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9173000 - 9172941
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||| | |||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  9173000 tttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9180982 - 9180923
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||| | |||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  9180982 tttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9180923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21740912 - 21740853
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  21740912 tttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccct 21740853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23185562 - 23185621
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||| | || ||||||| |||||||||||||||| ||||||||    
T  23185562 tttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccct 23185621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40501767 - 40501708
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||||||||||||   |||| ||| |||||||||||| ||||||||||||    
T  40501767 tttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccct 40501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 51607418 - 51607363
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacgg 56  Q
    ||||||||||||||||||||||| | |||||||| |||||||||| | ||||||||    
T  51607418 tttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacgg 51607363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16140190 - 16140244
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    |||||||| | |||||||||||| | |||||||| ||||||||||||||||||||    
T  16140190 tttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3406554 - 3406613
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| |  |||| || ||||| ||||||||||||| |||||    
T  3406554 tttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccct 3406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3440266 - 3440207
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| |  |||| || ||||| ||||||||||||| |||||    
T  3440266 tttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccct 3440207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6889745 - 6889804
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||||||||||||   ||| |||| |||||||||| ||| ||||||||||    
T  6889745 tttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccct 6889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6891591 - 6891650
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||||||||||||   ||| |||| |||||||||| ||| ||||||||||    
T  6891591 tttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccct 6891650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19955852 - 19955911
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||| |||||| |||||    
T  19955852 tttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccct 19955911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18776743 - 18776684
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18776743 tttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 18776684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 20528575 - 20528464
Alignment:
Q  125 gtagttagttagagaatgattatttgtgcaacaagtattcattagatggttaagagttagcgatcttgtgtttgctacacataataagctaacatagaga 224  Q
    |||||||||||||||||||||| ||||| || ||||| |||||||||  ||||||||||| |||||  |||| | ||||| | ||||||||||||| |||    
T  20528575 gtagttagttagagaatgattacttgtgtaataagtaatcattagataattaagagttagtgatctcatgttggttacacgtgataagctaacataaaga 20528476  T
Q  225 cgcttttgtgta 236  Q
     |||||| ||||    
T  20528475 tgcttttatgta 20528464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29077344 - 29077403
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  29077344 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 29077403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8171517 - 8171460
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  8171517 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12596267 - 12596208
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  12596267 tttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 12596208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25010551 - 25010610
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  25010551 tttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggccct 25010610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26254118 - 26254177
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | | |||||| ||||||||||||||||||| |||||    
T  26254118 tttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccct 26254177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40357357 - 40357303
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  40357357 tttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 40357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10329387 - 10329328
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| ||| ||||||||    
T  10329387 tttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccct 10329328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20091257 - 20091198
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||| ||||||||||||    
T  20091257 tttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 20091198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8239811 - 8239869
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccc 59  Q
    ||||||| || |||||||||||||| |||||||| ||||| |||||| |||||||||||    
T  8239811 tttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23551048 - 23550989
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||| ||||||| ||||    
T  23551048 tttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccct 23550989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24525659 - 24525600
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||| | |||||||||||| | |||||||| |||||||||||| ||||||| ||||    
T  24525659 tttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccct 24525600  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 28749847 - 28749894
Alignment:
Q  13 ctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||| | |||||||| |||||||||| ||||||||||||||    
T  28749847 ctcttttcattcccagagccgagcctccgaattttcagggacggccct 28749894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48983816 - 48983757
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||| || ||||||||||||   |||||||| |||||||||||| ||||||||||||    
T  48983816 tttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 48983757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1467 - 1526
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  1467 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2952197 - 2952138
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  2952197 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 2952138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3048495 - 3048436
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  3048495 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccct 3048436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37430136 - 37430077
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  37430136 tttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 37430077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42600907 - 42600966
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||    
T  42600907 tttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccct 42600966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30883455 - 30883512
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||    
T  30883455 tttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41879304 - 41879363
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||| ||||||||||||| | |||||||| ||| |||||||||||||||||||||    
T  41879304 tttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccct 41879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13534666 - 13534609
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||| | |||||||| |||||||||| ||||||||||||    
T  13534666 tttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13624206 - 13624149
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||| | |||||||| |||||||||| ||||||||||||    
T  13624206 tttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20003788 - 20003729
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| |  ||||||| ||||| |||||||||||||||||||    
T  20003788 tttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccct 20003729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23606608 - 23606549
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  23606608 tttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccct 23606549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23798239 - 23798180
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||| |||||||||||| || | |||||||| |||||||||||| ||||||||||||    
T  23798239 tttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccct 23798180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45475941 - 45476000
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| |  ||||||| |||||||||||||||||| ||||||    
T  45475941 tttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccct 45476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5860720 - 5860671
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcag 50  Q
    ||||||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  5860720 tttatcattgacctcttttcatttccagagccgagcctccaaattctcag 5860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13727377 - 13727318
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13727377 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 13727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21280673 - 21280732
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21280673 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 21280732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17354082 - 17354141
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||| ||||||||||||    
T  17354082 tttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccct 17354141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21479623 - 21479682
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||||||| |||||||||    
T  21479623 tttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccct 21479682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27788668 - 27788609
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  27788668 tttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 27788609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30832503 - 30832444
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| ||| |||||||||||||||||||||    
T  30832503 tttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccct 30832444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19987277 - 19987330
Alignment:
Q  2 ttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| |||||||    
T  19987277 ttatcactgacctcttttcattctgagagccgatcctccgaattcttagggacg 19987330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20711698 - 20711639
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||| ||||||||||||||||| | ||| |||| |||||||||||||||||||| ||||    
T  20711698 tttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccct 20711639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24710974 - 24710915
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||| ||||||||||||| |  |||| || |||||||||||||||||||||||||    
T  24710974 tttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggccct 24710915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27314157 - 27314098
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||| ||| |||||||||| ||||||||||||||    
T  27314157 tttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccct 27314098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1155825 - 1155767
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccc 59  Q
    ||||||||||||||||||||||| ||||| |||| ||||| |||| | |||||||||||    
T  1155825 tttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33774246 - 33774306
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcccta 61  Q
    ||||| |||| |||||||||||||  |||||||| |||||||||||||| ||| |||||||    
T  33774246 tttattactggcctcttttcattttcagagccgagcctccgaattctcaaggatggcccta 33774306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36187855 - 36187796
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  36187855 tttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 36187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15480066 - 15480007
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  15480066 tttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 15480007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34756341 - 34756289
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcaggga 53  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  34756341 tttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 34756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16799300 - 16799241
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||| ||||||||||||    
T  16799300 tttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggccct 16799241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27079137 - 27079196
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||||||||||||||||    
T  27079137 tttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccct 27079196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38869339 - 38869280
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||| ||||||||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  38869339 tttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccct 38869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19523324 - 19523380
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    ||||||||||  ||||||||||| | |||||||| ||||||||||||||||||||||    
T  19523324 tttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2275015 - 2275070
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacgg 56  Q
    |||||||||| |||||||||||| | ||| |||| |||||||||||||||||||||    
T  2275015 tttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7671058 - 7671117
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| | ||||||||||    
T  7671058 tttatcactggcctcttttcattcccagagccgagcctccgaattcttaaggacggccct 7671117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16198769 - 16198710
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| ||||| ||||||    
T  16198769 tttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccct 16198710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28822312 - 28822253
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||| ||||||||||||| | | |||||| |||||||||||| ||||||||||||    
T  28822312 tttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31194588 - 31194529
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||||| | |||||||| |||||||||| ||||||||||||||    
T  31194588 tttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccct 31194529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40389513 - 40389461
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcaggga 53  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||| |||||    
T  40389513 tttatcactgacatcttttcattcccagagccgagcctccgaattcttaggga 40389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22986533 - 22986474
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   ||||| || |||||||||||||| ||||||||||    
T  22986533 tttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccct 22986474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23284003 - 23283944
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| ||| | | || |||| ||||||||||||||||||||    
T  23284003 tttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccct 23283944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30854454 - 30854511
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||| ||||||| |||||||| | |||||||| ||||| |||| ||||||||||||    
T  30854454 tttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3155341 - 3155400
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||    
T  3155341 tttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccct 3155400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4506018 - 4506077
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4506018 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 4506077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6965129 - 6965186
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  6965129 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12337425 - 12337366
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  12337425 tttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccct 12337366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3953128 - 3953187
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||| ||||    
T  3953128 tttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccct 3953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8907056 - 8906997
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||  |||||||| |||||||||||||||| ||||||||    
T  8907056 tttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccct 8906997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 16485936 - 16485987
Alignment:
Q  173 gttaagagttagcgatcttgtgtttgctacacataataagctaacatagaga 224  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  16485936 gttaagagttagtgatcttgtgtttgttacacatgataagctaacatagaga 16485987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34694098 - 34694155
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||| | |||||||||||||| ||| |||| |||||||||||||||||||||||    
T  34694098 tttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34716510 - 34716567
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||| | |||||||||||||| ||| |||| |||||||||||||||||||||||    
T  34716510 tttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40636261 - 40636317
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    |||||||||| |||||||||||| | ||||| || ||||||||||||||||||||||    
T  40636261 tttatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1396677 - 1396618
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||||| ||| ||||||    
T  1396677 tttatcactggcctcttttcatttccagagtcgagcctccgaattctcaaggaaggccct 1396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27506719 - 27506660
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| ||||||||||||   |||||||| |||||||||||| ||||||||||||    
T  27506719 tttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 27506660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29939841 - 29939786
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacgg 56  Q
    ||||||||||||||||||| ||| | |||||||| ||| |||||||||||||||||    
T  29939841 tttatcactgacctctttttattcccagagccgagccttcgaattctcagggacgg 29939786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5952696 - 5952642
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    ||||||| || |||||||||||| | |||||||| ||||||||||||||||||||    
T  5952696 tttatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24410563 - 24410622
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | | | |||| |||||||||||| ||||||||||||    
T  24410563 tttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggccct 24410622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26716253 - 26716312
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | | |||||| ||  |||||||| ||||||||||||    
T  26716253 tttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccct 26716312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10762545 - 10762488
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||| |||||||||||| | ||||| || ||||| |||||| ||||||||||    
T  10762545 tttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47129116 - 47129172
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  47129116 tttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 47129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16882373 - 16882314
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  16882373 tttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccct 16882314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32915515 - 32915574
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  32915515 tttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 32915574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 55255387 - 55255446
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||    
T  55255387 tttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 55255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34027708 - 34027767
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  34027708 tttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 34027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 54780908 - 54780967
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||| | |||||||||||||||||||||||||    
T  54780908 tttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccct 54780967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1105661 - 1105717
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggc 57  Q
    ||||||||||||||||||||||| | |||||||| |||| ||||||||| |||||||    
T  1105661 tttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 1105717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5128818 - 5128759
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| ||||  |||||||||||||||||||    
T  5128818 tttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccct 5128759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10428176 - 10428117
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||| |||||||||||||||||| | |||||||| |||||||||||||  ||||||||||    
T  10428176 tttagcactgacctcttttcattcccagagccgagcctccgaattctcgaggacggccct 10428117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32128714 - 32128773
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||| |||||||| | |||||||| ||||| |||||| ||||||||||||    
T  32128714 tttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccct 32128773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37777200 - 37777141
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||||||||||||||| | |||||||| |||||||||| | |||||| |||||    
T  37777200 tttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacagccct 37777141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40089654 - 40089713
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||| ||||||| ||||    
T  40089654 tttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccct 40089713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48209376 - 48209435
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||| | | |||||||| |||||||||||||||||||||||||    
T  48209376 tttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccct 48209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54083220 - 54083161
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||||||||||||   |||||||| |||||||||| | ||||||||||||    
T  54083220 tttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccct 54083161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38352243 - 38352189
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacg 55  Q
    ||||||||||| ||||||||||| | |||||||| |||||||||||| |||||||    
T  38352243 tttatcactgatctcttttcattcccagagccgagcctccgaattcttagggacg 38352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 16845165 - 16845209
Alignment:
Q  16 ttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||    
T  16845165 ttttcatttccagagccgagcctccgaattcttagggacggccct 16845209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38209568 - 38209520
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctca 49  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  38209568 tttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2790719 - 2790660
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||||| | |||||||| |||||||||||| || |||||||||    
T  2790719 tttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccct 2790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10979032 - 10979091
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||| ||||||||||||| | |||||  | ||||||||||||||| |||||||||    
T  10979032 tttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccct 10979091  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17679529 - 17679588
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||||||  ||||||||||| | ||| |||| ||||||||||||||| |||||||||    
T  17679529 tttatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccct 17679588  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19498631 - 19498690
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    ||||||| || ||| |||||||| |||||||||| |||||||||||| || |||||||||    
T  19498631 tttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccct 19498690  T

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Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24969726 - 24969785
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||  |||||||||||| | |||| ||| |||||||||||| ||||||||||||    
T  24969726 tttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccct 24969785  T

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Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34768552 - 34768493
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||  |||||||||||| | | |||||| |||||||||||||||||||| ||||    
T  34768552 tttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccct 34768493  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 13460305 - 13460359
Alignment:
Q  6 cactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||||||| ||| | |||| ||| |||||||||||||| ||||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccct 13460359  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43455509 - 43455463
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattct 47  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||    
T  43455509 tttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35465235 - 35465284
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcag 50  Q
    ||||||||||||||||||||||| | |||  ||| |||||||||||||||    
T  35465235 tttatcactgacctcttttcattcccagaatcgagcctccgaattctcag 35465284  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35779305 - 35779248
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggcc 58  Q
    |||||||||  |||||||||||| || ||| ||| |||||||||||||| ||||||||    
T  35779305 tttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggcc 35779248  T

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Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 106663 - 106722
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| ||||| |||||| ||||||||||||    
T  106663 tttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 106722  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 183184 - 183243
Alignment:
Q  1 tttatcactgacctcttttcatttctagagccgatcctccgaattctcagggacggccct 60  Q
    |||||||||| |||||||||||| | |||||||| |||| ||||| ||||||||||||||    
T  183184 tttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccct 183243  T

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