View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6892_low_26 (Length: 236)

Name: NF6892_low_26
Description: NF6892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6892_low_26
NF6892_low_26
[»] chr6 (25 HSPs)
chr6 (11-219)||(17353942-17354143)
chr6 (11-218)||(27788608-27788806)
chr6 (11-208)||(28075771-28075964)
chr6 (11-218)||(13727317-13727517)
chr6 (16-218)||(20711638-20711833)
chr6 (11-122)||(33774105-33774216)
chr6 (11-218)||(21280533-21280733)
chr6 (11-218)||(21479482-21479683)
chr6 (11-219)||(24710913-24711117)
chr6 (11-125)||(19737696-19737810)
chr6 (11-125)||(34397845-34397959)
chr6 (11-219)||(235142-235343)
chr6 (11-218)||(30832443-30832642)
chr6 (31-216)||(1155767-1155947)
chr6 (49-218)||(27314097-27314259)
chr6 (27-123)||(6159442-6159538)
chr6 (27-123)||(2477590-2477686)
chr6 (159-212)||(19987277-19987330)
chr6 (150-217)||(33774238-33774305)
chr6 (27-122)||(20611794-20611889)
chr6 (27-118)||(21183686-21183777)
chr6 (11-128)||(19987149-19987256)
chr6 (29-73)||(27994775-27994819)
chr6 (151-218)||(19737612-19737678)
chr6 (184-218)||(12083030-12083064)
[»] chr4 (67 HSPs)
chr4 (11-218)||(34027569-34027768)
chr4 (11-218)||(32128574-32128774)
chr4 (11-218)||(37777140-37777340)
chr4 (11-218)||(54083160-54083359)
chr4 (14-207)||(43455460-43455645)
chr4 (15-219)||(54780771-54780969)
chr4 (11-125)||(10978890-10979004)
chr4 (18-218)||(2790659-2790851)
chr4 (11-219)||(32915375-32915576)
chr4 (11-125)||(34768577-34768691)
chr4 (11-125)||(38209594-38209708)
chr4 (11-219)||(16845011-16845211)
chr4 (11-125)||(48209230-48209344)
chr4 (11-120)||(13460197-13460306)
chr4 (11-214)||(47128977-47129172)
chr4 (11-219)||(40089506-40089715)
chr4 (11-218)||(19498494-19498691)
chr4 (11-121)||(37514649-37514759)
chr4 (11-218)||(16882313-16882512)
chr4 (11-214)||(1105522-1105717)
chr4 (11-212)||(38352189-38352372)
chr4 (11-219)||(10428115-10428322)
chr4 (11-125)||(35779329-35779442)
chr4 (11-118)||(5128852-5128959)
chr4 (11-129)||(24969427-24969535)
chr4 (11-123)||(35465097-35465208)
chr4 (27-115)||(24396940-24397028)
chr4 (150-218)||(55255379-55255447)
chr4 (27-123)||(36118463-36118559)
chr4 (33-123)||(36178684-36178774)
chr4 (149-218)||(24969717-24969786)
chr4 (27-123)||(27112036-27112132)
chr4 (27-128)||(2135321-2135422)
chr4 (48-125)||(16922332-16922409)
chr4 (149-218)||(17679520-17679589)
chr4 (11-80)||(23509846-23509915)
chr4 (27-123)||(10042005-10042101)
chr4 (150-218)||(34768492-34768560)
chr4 (155-218)||(5128758-5128821)
chr4 (27-121)||(37744916-37745011)
chr4 (27-109)||(4167910-4167992)
chr4 (150-204)||(35465227-35465281)
chr4 (11-57)||(55255259-55255305)
chr4 (149-218)||(10979023-10979092)
chr4 (149-218)||(16922245-16922314)
chr4 (64-125)||(17679443-17679504)
chr4 (64-125)||(51691918-51691979)
chr4 (158-218)||(48209376-48209436)
chr4 (27-123)||(52468292-52468388)
chr4 (151-202)||(23508443-23508494)
chr4 (28-123)||(39329397-39329492)
chr4 (151-204)||(38209522-38209575)
chr4 (27-116)||(40217238-40217327)
chr4 (49-125)||(51964736-51964815)
chr4 (150-202)||(2975358-2975410)
chr4 (27-123)||(45656181-45656277)
chr4 (163-218)||(13460305-13460360)
chr4 (149-219)||(37514781-37514849)
chr4 (84-125)||(9578667-9578708)
chr4 (50-123)||(39655259-39655332)
chr4 (149-202)||(51964831-51964884)
chr4 (158-218)||(9578575-9578635)
chr4 (75-125)||(23508513-23508564)
chr4 (149-215)||(35779248-35779314)
chr4 (50-115)||(29425187-29425252)
chr4 (184-221)||(45560072-45560109)
chr4 (35-123)||(36362876-36362964)
[»] chr1 (48 HSPs)
chr1 (11-218)||(17168952-17169151)
chr1 (11-221)||(19955713-19955915)
chr1 (11-218)||(40501707-40501907)
chr1 (13-129)||(27559635-27559751)
chr1 (11-218)||(9172940-9173140)
chr1 (11-218)||(9180922-9181122)
chr1 (11-218)||(44655737-44655936)
chr1 (11-218)||(6771787-6771989)
chr1 (11-218)||(14146296-14146495)
chr1 (11-220)||(5316676-5316877)
chr1 (11-125)||(1366881-1366995)
chr1 (11-219)||(5027545-5027747)
chr1 (11-125)||(23185423-23185537)
chr1 (11-125)||(4971621-4971735)
chr1 (11-218)||(51607358-51607557)
chr1 (11-215)||(13913401-13913599)
chr1 (11-221)||(3406414-3406617)
chr1 (11-221)||(3440203-3440406)
chr1 (15-212)||(16140055-16140244)
chr1 (11-125)||(50881426-50881540)
chr1 (11-201)||(41697072-41697254)
chr1 (27-123)||(38547041-38547137)
chr1 (36-219)||(21740851-21741029)
chr1 (150-218)||(27906646-27906714)
chr1 (149-218)||(6889736-6889805)
chr1 (149-218)||(6891582-6891651)
chr1 (149-218)||(22865378-22865447)
chr1 (11-129)||(44895648-44895760)
chr1 (27-123)||(45758506-45758602)
chr1 (27-123)||(39134727-39134824)
chr1 (151-215)||(50881557-50881621)
chr1 (27-129)||(33170771-33170873)
chr1 (149-204)||(34247153-34247208)
chr1 (11-57)||(27906788-27906834)
chr1 (27-122)||(43235774-43235871)
chr1 (48-125)||(6889644-6889721)
chr1 (48-125)||(6891490-6891567)
chr1 (149-218)||(23185553-23185622)
chr1 (27-123)||(6221690-6221785)
chr1 (50-129)||(22865460-22865538)
chr1 (158-218)||(1366797-1366857)
chr1 (150-218)||(4971536-4971604)
chr1 (32-120)||(38853539-38853627)
chr1 (29-123)||(5533326-5533421)
chr1 (27-115)||(26803960-26804045)
chr1 (150-207)||(44895775-44895832)
chr1 (67-123)||(17322628-17322684)
chr1 (183-219)||(52127459-52127495)
[»] chr7 (38 HSPs)
chr7 (11-219)||(20091196-20091398)
chr7 (11-218)||(48983756-48983961)
chr7 (11-218)||(29077205-29077404)
chr7 (11-218)||(23550988-23551188)
chr7 (11-218)||(24525599-24525802)
chr7 (11-218)||(18776683-18776883)
chr7 (11-215)||(8171460-8171656)
chr7 (11-219)||(10329326-10329527)
chr7 (11-121)||(10955469-10955579)
chr7 (15-218)||(47984885-47985083)
chr7 (11-218)||(12596207-12596404)
chr7 (11-125)||(19692079-19692193)
chr7 (11-125)||(38414879-38414993)
chr7 (11-221)||(25010418-25010614)
chr7 (11-216)||(8239670-8239869)
chr7 (31-218)||(28749715-28749895)
chr7 (48-218)||(26254015-26254178)
chr7 (27-123)||(2611267-2611363)
chr7 (27-122)||(36891579-36891674)
chr7 (28-114)||(23020498-23020583)
chr7 (27-123)||(27237428-27237524)
chr7 (30-116)||(9021812-9021898)
chr7 (49-125)||(33162342-33162418)
chr7 (149-204)||(40357311-40357366)
chr7 (38-123)||(6765686-6765771)
chr7 (149-218)||(19692210-19692279)
chr7 (30-122)||(23859077-23859169)
chr7 (31-122)||(20153206-20153297)
chr7 (149-218)||(38414793-38414862)
chr7 (27-123)||(7398452-7398548)
chr7 (27-122)||(12981327-12981422)
chr7 (152-218)||(10955605-10955671)
chr7 (30-123)||(36902929-36903022)
chr7 (149-217)||(33162257-33162325)
chr7 (45-120)||(21763595-21763670)
chr7 (64-123)||(23744834-23744893)
chr7 (28-115)||(38971255-38971341)
chr7 (73-123)||(9014183-9014233)
[»] chr8 (32 HSPs)
chr8 (11-218)||(42600767-42600967)
chr8 (11-218)||(23798179-23798379)
chr8 (11-218)||(23606548-23606747)
chr8 (11-219)||(10917376-10917576)
chr8 (11-218)||(45475802-45476001)
chr8 (11-218)||(2952137-2952339)
chr8 (11-215)||(13534609-13534804)
chr8 (11-215)||(13624149-13624344)
chr8 (11-215)||(30883314-30883512)
chr8 (11-218)||(37430076-37430276)
chr8 (11-218)||(41879166-41879364)
chr8 (27-123)||(15167421-15167517)
chr8 (11-125)||(5860748-5860862)
chr8 (27-122)||(15078759-15078854)
chr8 (11-218)||(3048435-3048635)
chr8 (27-123)||(11290185-11290281)
chr8 (27-123)||(39332411-39332507)
chr8 (149-218)||(20003728-20003797)
chr8 (50-123)||(30674409-30674482)
chr8 (27-122)||(8102913-8103008)
chr8 (27-107)||(5942697-5942777)
chr8 (27-123)||(7944528-7944624)
chr8 (35-123)||(8646215-8646302)
chr8 (27-123)||(14509989-14510084)
chr8 (27-123)||(5973113-5973209)
chr8 (27-121)||(5721560-5721654)
chr8 (150-204)||(5860674-5860728)
chr8 (32-121)||(34789870-34789959)
chr8 (27-123)||(41677179-41677276)
chr8 (27-122)||(25561502-25561595)
chr8 (27-123)||(23941097-23941193)
chr8 (173-218)||(33963268-33963313)
[»] chr5 (45 HSPs)
chr5 (11-218)||(16198709-16198909)
chr5 (11-218)||(38869279-38869478)
chr5 (11-218)||(27078996-27079197)
chr5 (11-217)||(28822253-28822457)
chr5 (11-218)||(9364276-9364476)
chr5 (11-125)||(30854314-30854428)
chr5 (11-218)||(16799240-16799442)
chr5 (11-219)||(7670909-7671119)
chr5 (11-218)||(36187795-36187994)
chr5 (11-218)||(15480006-15480204)
chr5 (15-127)||(40389535-40389647)
chr5 (11-218)||(16591990-16592189)
chr5 (11-125)||(34756367-34756481)
chr5 (11-214)||(19523184-19523380)
chr5 (11-218)||(27924067-27924267)
chr5 (11-213)||(2274875-2275070)
chr5 (26-218)||(22986473-22986658)
chr5 (24-125)||(23284063-23284164)
chr5 (29-123)||(36868879-36868973)
chr5 (31-218)||(31194528-31194706)
chr5 (48-125)||(7338021-7338098)
chr5 (153-210)||(40389461-40389518)
chr5 (27-123)||(1366529-1366625)
chr5 (27-123)||(14318388-14318484)
chr5 (30-122)||(26718953-26719045)
chr5 (30-122)||(26988697-26988789)
chr5 (27-123)||(2412089-2412185)
chr5 (150-210)||(34756289-34756349)
chr5 (27-122)||(2530901-2530996)
chr5 (35-122)||(10543682-10543769)
chr5 (28-122)||(24395741-24395835)
chr5 (149-218)||(31881348-31881417)
chr5 (27-107)||(41911636-41911716)
chr5 (149-215)||(30854445-30854511)
chr5 (31-125)||(31881435-31881528)
chr5 (149-218)||(23283943-23284012)
chr5 (27-123)||(33037781-33037877)
chr5 (149-204)||(7338115-7338170)
chr5 (29-123)||(10407464-10407558)
chr5 (30-123)||(2024645-2024738)
chr5 (27-123)||(11242321-11242417)
chr5 (27-123)||(34425904-34426000)
chr5 (72-123)||(22648739-22648790)
chr5 (82-123)||(606210-606251)
chr5 (27-100)||(15639644-15639717)
[»] scaffold0039 (1 HSPs)
scaffold0039 (11-219)||(106523-106724)
[»] chr3 (42 HSPs)
chr3 (11-219)||(34290553-34290754)
chr3 (11-219)||(43207156-43207355)
chr3 (11-214)||(44708465-44708660)
chr3 (11-218)||(47467672-47467872)
chr3 (11-218)||(50939152-50939351)
chr3 (11-218)||(8073257-8073455)
chr3 (15-214)||(37168359-37168551)
chr3 (11-218)||(54407073-54407275)
chr3 (11-218)||(21582759-21582960)
chr3 (11-129)||(53506884-53507002)
chr3 (11-125)||(54619207-54619321)
chr3 (11-125)||(9878691-9878805)
chr3 (11-218)||(27078486-27078687)
chr3 (11-218)||(27084283-27084484)
chr3 (11-218)||(38681011-38681211)
chr3 (11-121)||(53149322-53149432)
chr3 (11-123)||(3953902-3954014)
chr3 (11-219)||(36715941-36716143)
chr3 (11-121)||(42098789-42098899)
chr3 (11-204)||(18372467-18372656)
chr3 (149-220)||(48720427-48720498)
chr3 (22-218)||(50258542-50258731)
chr3 (27-122)||(32319162-32319257)
chr3 (156-218)||(29620364-29620426)
chr3 (31-215)||(36605973-36606149)
chr3 (13-94)||(29620423-29620504)
chr3 (11-212)||(48157127-48157310)
chr3 (150-218)||(53506802-53506869)
chr3 (27-123)||(54574833-54574929)
chr3 (150-218)||(54619121-54619189)
chr3 (27-122)||(8420330-8420425)
chr3 (151-218)||(42098922-42098989)
chr3 (151-217)||(3953816-3953882)
chr3 (45-123)||(26279564-26279642)
chr3 (32-122)||(28689368-28689458)
chr3 (65-118)||(23641329-23641382)
chr3 (32-123)||(49393099-49393189)
chr3 (149-215)||(53149235-53149301)
chr3 (27-123)||(25855426-25855521)
chr3 (64-123)||(42453445-42453504)
chr3 (149-182)||(9878642-9878675)
chr3 (27-123)||(789940-790036)
[»] chr2 (40 HSPs)
chr2 (11-218)||(27506659-27506858)
chr2 (11-218)||(24410420-24410623)
chr2 (11-215)||(10762488-10762683)
chr2 (11-218)||(29939781-29939980)
chr2 (15-219)||(26716116-26716314)
chr2 (11-218)||(4505878-4506078)
chr2 (11-219)||(3155201-3155402)
chr2 (11-221)||(12337362-12337566)
chr2 (11-215)||(6964991-6965186)
chr2 (15-123)||(9046017-9046126)
chr2 (11-218)||(8906996-8907197)
chr2 (11-121)||(7162768-7162878)
chr2 (11-121)||(3952990-3953100)
chr2 (27-123)||(38400798-38400894)
chr2 (64-214)||(40636175-40636317)
chr2 (27-123)||(16097008-16097104)
chr2 (27-123)||(21665706-21665802)
chr2 (27-123)||(28425716-28425812)
chr2 (45-125)||(34693993-34694073)
chr2 (45-125)||(34716405-34716485)
chr2 (151-218)||(3953121-3953188)
chr2 (29-123)||(24035551-24035645)
chr2 (27-123)||(7742139-7742236)
chr2 (149-218)||(8327732-8327801)
chr2 (149-218)||(9046144-9046213)
chr2 (27-123)||(13800550-13800647)
chr2 (150-218)||(1396617-1396685)
chr2 (149-212)||(5952642-5952705)
chr2 (83-129)||(8327674-8327720)
chr2 (149-215)||(34694089-34694155)
chr2 (149-215)||(34716501-34716567)
chr2 (27-96)||(37182670-37182739)
chr2 (27-123)||(12134046-12134142)
chr2 (151-218)||(7162900-7162967)
chr2 (82-123)||(42029200-42029241)
chr2 (72-123)||(16227374-16227425)
chr2 (184-218)||(3400140-3400174)
chr2 (64-125)||(5952721-5952780)
chr2 (33-102)||(22727529-22727598)
chr2 (27-123)||(11912763-11912859)
[»] scaffold0070 (1 HSPs)
scaffold0070 (11-218)||(1328-1527)
[»] scaffold1590 (1 HSPs)
scaffold1590 (27-123)||(264-360)
[»] scaffold1320 (1 HSPs)
scaffold1320 (27-122)||(1355-1450)
[»] scaffold0097 (1 HSPs)
scaffold0097 (27-128)||(38926-39027)
[»] scaffold0012 (1 HSPs)
scaffold0012 (27-122)||(206496-206591)
[»] scaffold0007 (1 HSPs)
scaffold0007 (28-123)||(230865-230960)
[»] scaffold0182 (1 HSPs)
scaffold0182 (29-123)||(23999-24093)
[»] scaffold0001 (3 HSPs)
scaffold0001 (149-218)||(183175-183244)
scaffold0001 (11-76)||(181904-181969)
scaffold0001 (72-121)||(183106-183155)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-123)||(173516-173612)
[»] scaffold0022 (2 HSPs)
scaffold0022 (27-123)||(40086-40184)
scaffold0022 (27-123)||(138146-138244)


Alignment Details
Target: chr6 (Bit Score: 119; Significance: 6e-61; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 17353942 - 17354143
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17353942 tttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 17354041  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                   |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  17354042 aaatagaacattgcttttt-------ttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttaggga 17354134  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  17354135 cggccctgt 17354143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 27788806 - 27788608
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  27788806 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27788707  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||| |||||| |||                   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  27788706 aaatagaaaattgctcttt---------taaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggga 27788616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 28075771 - 28075964
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||  ||||||||||||||||||| ||||||||    
T  28075771 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatat 28075870  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    |||||||||||||||||||                   |||||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  28075871 aaatagaacattgcttttt----aaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 28075964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 13727517 - 13727317
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  13727517 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 13727418  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  13727417 aaatagaacattgctcttttaaaaaaaattat-------gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 13727325  T
Q  211 cggccctg 218  Q
    ||||||||    
T  13727324 cggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 20711833 - 20711638
Alignment:
Q  16 tgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaata 115  Q
    |||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  116 gaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    |||||||||| |||                   |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||| ||    
T  20711733 gaacattgctcttt-------taaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtcc 20711641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 33774105 - 33774216
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  33774105 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 33774204  T
Q  111 aaatagaacatt 122  Q
    ||||||||||||    
T  33774205 aaatagaacatt 33774216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 21280533 - 21280733
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||| |||||||||||||||| |||||||||| || | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  21280533 tttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21280632  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  21280633 aaatagaacattgctcttttaaaaaaaattat-------gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 21280725  T
Q  211 cggccctg 218  Q
    ||||||||    
T  21280726 cggccctg 21280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 21479482 - 21479683
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  21479482 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21479581  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  ||||||||||||||| |||||| || ||    
T  21479582 aaatagaacattgctcttttaaaaaaaaattat------gttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagaga 21479675  T
Q  211 cggccctg 218  Q
    ||||||||    
T  21479676 cggccctg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 24711117 - 24710913
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||  |||||| |||||||||||| ||||||||    
T  24711117 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 24711018  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||  || |||                   |||||||||||||||||| |||||||||||||| | |||| ||||||||||||||| |||||    
T  24711017 aaatagaacatcactcttt----aaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcaggga 24710922  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  24710921 cggccctgt 24710913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 19737810 - 19737696
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |  |||||||||||||||||  |||||| |||||||||||  ||||||||    
T  19737810 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatat 19737711  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  19737710 aaatagaacattgct 19737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 34397845 - 34397959
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| |||| |||||||||||| ||||||||||||||| || |||  |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  34397845 tttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatat 34397944  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  34397945 aaatagaacattgct 34397959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 235343 - 235142
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaa--caccttatatttatctttttaaaaat 108  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||  |||| |||||| | ||||||||    ||||||||||||||||||| ||||||    
T  235343 tttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaat 235245  T
Q  109 ataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    ||||||||| |||||||||||                   |||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||    
T  235244 ataaatagatcattgcttttt--------aaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattcttagg 235153  T
Q  209 gacggccctgt 219  Q
    || || |||||    
T  235152 gatggtcctgt 235142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 30832642 - 30832443
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||  | || ||||||| |||||||||  || ||| ||||||| |||| |||||| |    
T  30832642 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgt 30832543  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||  |||                   ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||    
T  30832542 aaatagaacatcgcgcttt--------ttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcaggga 30832451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 1155947 - 1155767
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttn 130  Q
    ||||||||||||| ||||||||||||| | ||  |||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||| |||     
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt- 1155849  T
Q  131 nnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccc 216  Q
                      | |||||||||||||||||||||||||||||||  ||| |||||||||| |||| |||||||||||||    
T  1155848 ----aaaaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 27314259 - 27314097
Alignment:
Q  49 cattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaa-tataaatagaacattgctttttnnnnnnnnnnnnnnnnnn 147  Q
    ||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||| |||                      
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaata------- 27314167  T
Q  148 ncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
     ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| | |||||||||||||    
T  27314166 -cgttttgattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6159442 - 6159538
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| || |||||| |||| |||| ||| ||||| |||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 2477686 - 2477590
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| ||||||||||||  ||||| ||||||||||   |||||| |||||||||||| |||||| ||||| ||||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 19987277 - 19987330
Alignment:
Q  159 ttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacg 212  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19987277 ttatcactgacctcttttcattctgagagccgatcctccgaattcttagggacg 19987330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 33774238 - 33774305
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccct 217  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| | ||| ||||||    
T  33774238 gttttgattttattactggcctcttttcattttcagagccgagcctccgaattctcaaggatggccct 33774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||||||| |||| |||||||| ||||  |||  || |||||||| ||||||| |||||||| ||| |||||| ||| |||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaa 118  Q
    ||||||||||||||||| |||| |||||||  |||| ||||||| |||||||||   || || |||||||||||| |||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 19987149 - 19987256
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||| ||||| ||||||| | ||  |||||||||||||| ||||||||           ||| ||||||||||||||  ||||||||    
T  19987149 tttggtgttaggtggggattccttatgtatatggtaaccattttcacatttgggtgtaccg----------tcactttatatttatctttaaaaaaatat 19987238  T
Q  111 aaatagaacattgctttt 128  Q
    ||||||| ||||||||||    
T  19987239 aaatagatcattgctttt 19987256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 27994775 - 27994819
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgca 73  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtaccgca 27994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 19737678 - 19737612
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||| ||||||||||| || |||||||| ||| | |||||| ||||||| |||||    
T  19737678 ttttgattttatcactggcctcttttcatcct-agagccgaaccttcaaattctcagggacgaccctg 19737612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 12083064 - 12083030
Alignment:
Q  184 agagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| ||||||||||||||||    
T  12083064 agagccgagcctccgaatacttagggacggccctg 12083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 34027569 - 34027768
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34027569 tttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 34027668  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34027669 aaatagaacattgcttttt--------ttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggga 34027760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 32128574 - 32128774
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  32128574 tttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 32128673  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  32128674 aaatagaacattgctcttt-------taaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttaggga 32128766  T
Q  211 cggccctg 218  Q
    ||||||||    
T  32128767 cggccctg 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 37777340 - 37777140
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  37777340 tttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 37777241  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||| ||||||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37777240 aaatagaacattacttttt-------ttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttaggga 37777148  T
Q  211 cggccctg 218  Q
    | ||||||    
T  37777147 cagccctg 37777140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 54083359 - 54083160
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |  |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  54083359 tttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54083260  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| ||||| |||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54083259 aaatagatcattgtttttt--------ttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttaggga 54083168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 43455645 - 43455460
Alignment:
Q  14 ggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaa 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  114 tagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttag 207  Q
    |||||||||||| |||                   ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  43455545 tagaacattgctcttt--------taaaaataatacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattcttag 43455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 54780771 - 54780969
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaat 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  |||||| |||||||||||| ||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  115 agaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggc 214  Q
    ||||||||||| |||                   ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  54780871 agaacattgctcttt------taaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggc 54780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 10978890 - 10979004
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  10978890 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 10978989  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  10978990 aaatagaacattgct 10979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 2790851 - 2790659
Alignment:
Q  18 ttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaataga 117  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||   |||||||||||||||||| |||||||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  118 acattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccct 217  Q
    |||||| | |||                    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2790751 acattgttcttttaaaaaaaaaat--------gttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccct 2790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 32915375 - 32915576
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || | || ||||||| |||||||||  |||||| |||||||||||| ||||||||    
T  32915375 tttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 32915474  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  32915475 aaatagaacatcgctcttt-------taaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggga 32915567  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  32915568 cggccctgt 32915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 34768691 - 34768577
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| | || |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  34768691 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34768592  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  34768591 aaatagaacattgct 34768577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 38209708 - 38209594
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  38209708 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 38209609  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  38209608 aaatagaacattgct 38209594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 16845011 - 16845211
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaata 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  ||| ||||||  ||||||||| ||||||||||||||||||||  |||||||    
T  16845011 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaata 16845110  T
Q  110 taaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggg 209  Q
    |||||||||||||||| |||                   |||||||||||||||||||  || ||||||||  |||||||||||||||||||||||||||    
T  16845111 taaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactg-gcttttttcatttccagagccgagcctccgaattcttaggg 16845201  T
Q  210 acggccctgt 219  Q
    ||||||||||    
T  16845202 acggccctgt 16845211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 48209230 - 48209344
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||| || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  48209230 tttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 48209329  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  48209330 aaatagaacattgct 48209344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 13460197 - 13460306
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| || || |||||||||||||| ||||||| |||||||||||| ||||||||    
T  13460197 tttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatat 13460296  T
Q  111 aaatagaaca 120  Q
    ||||||||||    
T  13460297 aaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 47128977 - 47129172
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  47128977 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 47129076  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| | |||                   | ||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  47129077 aaatagaacattgttcttt--------taaaaaaaatacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 47129168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 40089506 - 40089715
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaa---- 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||| ||||        
T  40089506 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatata 40089605  T
Q  107 -----atataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaat 201  Q
         ||||||||| |||||||||||||                   ||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  40089606 aataaatataaataaaacattgcttttttaaaaaaaata--------cgttttgattttatcactgacttcttttcattccaagagccgagcctccgaat 40089697  T
Q  202 tcttagggacggccctgt 219  Q
    ||||||||||| ||||||    
T  40089698 tcttagggacgaccctgt 40089715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 19498494 - 19498691
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||  ||||||||  ||||||  ||||||||||||||||||| ||||||||    
T  19498494 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--atatacggcaccttatatttatcttttaaaaaatat 19498591  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||| || ||| |||||||||  |||||||||||||||||||||||| ||    
T  19498592 aaatagaacattgctcttt--------taaacaaaatacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtga 19498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 37514649 - 37514759
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||| | ||||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  37514649 tttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 37514748  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  37514749 aaatagaacat 37514759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 16882512 - 16882313
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||| ||||||| |||  ||||| ||||||||||||| |||  |||||||| ||||| ||  ||||||||||||||||||| |||| |||    
T  16882512 tttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtat 16882413  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| |||||                   ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  16882412 aaatagaacattgtttttt--------ttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttaggga 16882321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 1105522 - 1105717
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||| | |  ||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  1105522 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatat 1105621  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||  || |||                   ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | |||    
T  1105622 aaatagaacatcactcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagga 1105713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 212
Target Start/End: Complemental strand, 38352372 - 38352189
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||          ||||||||||||||||||| ||||||||    
T  38352372 tttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 38352283  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||| ||||||                   |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  38352282 aaatagatcattactttttaaaaaaaaata--------cgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattcttaggga 38352191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 10428322 - 10428115
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacattt--------gagtgtaccgcatatatacaacaccttatatttatcttttt 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| ||        | |||||||||||||||||  |||||| ||||||||||||     
T  10428322 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta 10428223  T
Q  103 aaaaatataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 202  Q
    |||||||||||||||||||||||||||                     ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  10428222 aaaaatataaatagaacattgctttttaaaaaaaataaa---------ttttgattttagcactgacctcttttcattcccagagccgagcctccgaatt 10428132  T
Q  203 cttagggacggccctgt 219  Q
    ||   ||||||||||||    
T  10428131 ctcgaggacggccctgt 10428115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 35779442 - 35779329
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||| |||||||||  ||||||||||||||||| || |||||||||| |||| ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  35779442 tttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 35779343  T
Q  111 aaatagaacattgct 125  Q
     ||||||||||||||    
T  35779342 -aatagaacattgct 35779329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 5128959 - 5128852
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| | || ||| || ||||||||||  |||||| |||||||||||| ||||||||    
T  5128959 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatat 5128860  T
Q  111 aaatagaa 118  Q
    ||||||||    
T  5128859 aaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 24969427 - 24969535
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||          ||||||||||||||||||| ||||||||    
T  24969427 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 24969516  T
Q  111 aaatagaacattgcttttt 129  Q
    ||||||| |||||||||||    
T  24969517 aaatagatcattgcttttt 24969535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 35465097 - 35465208
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||| |||  |||||||||||||||||  |||||| |||||||||| | ||||||||    
T  35465097 tttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatat 35465195  T
Q  111 aaatagaacattg 123  Q
    ||||| |||||||    
T  35465196 aaatataacattg 35465208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 24396940 - 24397028
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaata 115  Q
    |||||||||||||||||||||| |||||||| |||||||||| | |||||||||  ||||||||||||||||||| |||||| ||||||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 55255379 - 55255447
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  55255379 gttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 55255447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 36118559 - 36118463
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||| |||||||||||| |||| ||||||| ||||| ||||| | ||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 36178684 - 36178774
Alignment:
Q  33 tcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| | |||| ||||||||||||| ||||| ||||||||||| ||||||| |||||||||||| || ||| ||||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 24969717 - 24969786
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||| ||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  24969717 cgttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctg 24969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 27112036 - 27112132
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| ||||||||||||  ||||| ||||||||||   |||||| |||||||||||| |||||| ||||| ||||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 2135422 - 2135321
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctt 126  Q
    |||||||||| ||||||||||| || || || ||||  |||| ||||||||||| ||||||| |||||||||||| |||||| ||||||||| |||| ||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttt 2135323  T
Q  127 tt 128  Q
    ||    
T  2135322 tt 2135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 16922409 - 16922332
Alignment:
Q  48 tcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| |||| |  ||| |||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgct 16922332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 17679520 - 17679589
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||||||||||| || ||||||||||    
T  17679520 cgttttgattttatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 23509915 - 23509846
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatac 80  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| | |  |||||||||||||||||    
T  23509915 tttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 10042101 - 10042005
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| |||||||| |||| ||||||||||||  ||||| | |||| ||||  |||||| ||||||| ||||||||||| ||||||||||||||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattg 10042005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 34768560 - 34768492
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  34768560 gttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 5128821 - 5128758
Alignment:
Q  155 gattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||| ||||||||||||| ||||||||||||||  |||||| |||||||||||||    
T  5128821 gattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccctg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaatagaacat 121  Q
    ||||||||| ||||||| |||| |||||||| ||||  |||| ||||||||| | ||||||||||||||||||||  |||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaata 109  Q
    ||||||||||||||| | |||| |||||||| |||| ||||| |||||||||||  |||||| |||||||||||| |||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 35465227 - 35465281
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  35465227 gttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattct 35465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 55255259 - 55255305
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcac 57  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  55255259 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcac 55255305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 10979023 - 10979092
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| |||||||||||||| ||||||  | |||||||||||| || ||||||||||    
T  10979023 cgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 16922314 - 16922245
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||  |||||||||||| || || ||||||||| |||||| |||||||||||||    
T  16922314 cgttttgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 17679443 - 17679504
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||||||||||  |||||| |||||||||||| |||||||||||||||| ||||||    
T  17679443 gtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgct 17679504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 51691979 - 51691918
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||||||||||  |||||| |||||||||||| |||||| ||||||||||||||||    
T  51691979 gtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgct 51691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 48209376 - 48209436
Alignment:
Q  158 tttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||  ||||||||| || |||||||||||||||||||||| |||||||||||||    
T  48209376 tttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 52468292 - 52468388
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||| ||||| |||| |||||||| ||||  ||||   |||||||||  |||||| |||||||||||| |||||| ||||||||||||||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 52468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 23508494 - 23508443
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 202  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  23508494 ttttgattttatcactggcctcttttcattcccaaagccgagcctccgaatt 23508443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 39329492 - 39329397
Alignment:
Q  28 gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| |||||||| ||   |||||||  |||| ||||| | ||||||||||||||||| |||||||||||| |||||| |||| |||||||||    
T  39329492 gttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattg 39329397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 38209575 - 38209522
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||    
T  38209575 ttttgattttatcactggcctcttttcatttccagagccgagcctccaaattct 38209522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatag 116  Q
    |||| |||||||||| | || | |||||||  ||||  |||| ||||||||||| |||||||||||||||||||| |||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 51964736 - 51964815
Alignment:
Q  49 cattttcacatttgagtgtaccgcatatatacaacaccttatatttatcttttt---aaaaatataaatagaacattgct 125  Q
    ||||||||| | || ||||| |||||||||||  |||||| |||||||||||||   |||||||||||||||||||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgct 51964815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 2975410 - 2975358
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 202  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| | ||||||    
T  2975410 gttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 45656181 - 45656277
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||| ||||||||||| | || |||||||||||||  | || ||||||||||  |||||||  ||||||||||| |||||| |||||| |||||||    
T  45656181 ggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacattg 45656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 13460305 - 13460360
Alignment:
Q  163 cactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||| |||| ||||| |||||||||||||||| | |||||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctg 13460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 37514781 - 37514849
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctgt 219  Q
    ||||||||||||||||||| ||||||||||||| |   || |||||||| |||||| ||||||||||||||    
T  37514781 cgttttgattttatcactggcctcttttcattccc--cgctgagcctccaaattctcagggacggccctgt 37514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 9578708 - 9578667
Alignment:
Q  84 accttatatttatctttttaaaaatataaatagaacattgct 125  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  9578708 accttgtatttatcttttaaaaaatataaatagaacattgct 9578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 39655332 - 39655259
Alignment:
Q  50 attttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| |||| ||||||||||||||| |   || || |||||||||||| |||||| ||||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattg 39655259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 51964831 - 51964884
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 202  Q
    ||||||||||||||||  | ||||||||||||| |||||||||| |||||||||    
T  51964831 cgttttgattttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 9578635 - 9578575
Alignment:
Q  158 tttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||  |||||||||| || ||||| |||||||||||||||| | |||||||||||    
T  9578635 tttatcacttgcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctg 9578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 23508564 - 23508513
Alignment:
Q  75 atatacaacaccttatatttatctttttaaaaa-tataaatagaacattgct 125  Q
    |||||| ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgct 23508513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 35779314 - 35779248
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    ||||||||||||||||||  |||||||||||||   ||| ||| |||||||||||| | ||||||||    
T  35779314 cgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggcc 35779248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 29425252 - 29425187
Alignment:
Q  50 attttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaata 115  Q
    |||||||| ||| | ||||| ||||||||||  |||||||||||||| |||| |||||| ||||||    
T  29425252 attttcacctttaaatgtactgcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 45560109 - 45560072
Alignment:
Q  184 agagccgagcctccgaattcttagggacggccctgtat 221  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  45560109 agagccgagcctccgaatacttaaggacggccctgtat 45560072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 36362964 - 36362876
Alignment:
Q  35 atgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| | |||| |||| |||||||| |||||  ||||||||||  ||| || |||||||||||| |||||| |||| ||| |||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattg 36362876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 17168952 - 17169151
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17168952 tttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatat 17169051  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                   ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17169052 aaatagaacattgcttttt--------ttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttaggga 17169143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 19955713 - 19955915
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||   |||||||||||||||||| ||||||||    
T  19955713 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 19955812  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||||||||||                   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19955813 aaatagatcattgcttttt--------aaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaggga 19955904  T
Q  211 cggccctgtat 221  Q
    | |||||||||    
T  19955905 cagccctgtat 19955915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 40501907 - 40501707
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||| || |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40501907 tttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 40501808  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||| ||||||                   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40501807 aaatagatcattacttttt-------ttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttaggga 40501715  T
Q  211 cggccctg 218  Q
    ||||||||    
T  40501714 cggccctg 40501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 27559635 - 27559751
Alignment:
Q  13 tggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataa 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  113 atagaacattgcttttt 129  Q
    |||||||||||||||||    
T  27559735 atagaacattgcttttt 27559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 9173140 - 9172940
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  9173140 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9173041  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| |||||                   | |||| | |||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  9173040 aaatagaacattgtttttt-------aaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttaggga 9172948  T
Q  211 cggccctg 218  Q
    ||||||||    
T  9172947 cggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 9181122 - 9180922
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  9181122 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9181023  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| |||||                   | |||| | |||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  9181022 aaatagaacattgtttttt-------aaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttaggga 9180930  T
Q  211 cggccctg 218  Q
    ||||||||    
T  9180929 cggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 44655737 - 44655936
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || | || ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  44655737 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 44655836  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    ||||||||||||||||||  |||||||||||  |||||||||||||||||||||| |||||    
T  44655837 aaatagaacattgctcttttaaaaaaattat--------gttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcaggga 44655928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 6771787 - 6771989
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  6771787 tttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 6771886  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  6771887 aaatagaacatcgctcttt-----aaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggga 6771981  T
Q  211 cggccctg 218  Q
    ||||||||    
T  6771982 cggccctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 14146296 - 14146495
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  14146296 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 14146395  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||| |||||    
T  14146396 aaatagaacatcgctcttt--------taaaaaaaatacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcaggga 14146487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 5316676 - 5316877
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  5316676 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5316775  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||||||||||||||||||||  |  | ||||||||| |||||| |||||    
T  5316776 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcaggga 5316867  T
Q  211 cggccctgta 220  Q
    ||||||||||    
T  5316868 cggccctgta 5316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 1366995 - 1366881
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||  |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  1366995 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 1366896  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  1366895 aaatagaacattgct 1366881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 5027545 - 5027747
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  5027545 tttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5027644  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||    
T  5027645 aaatagaacattgctcttt------taaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcaggga 5027738  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  5027739 cggccctgt 5027747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 23185423 - 23185537
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  23185423 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 23185522  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  23185523 aaatagaacattgct 23185537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 4971735 - 4971621
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||   ||||| |||||||||||| ||||||||    
T  4971735 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 4971636  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  4971635 aaatagaacattgct 4971621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 51607557 - 51607358
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatac-aacaccttatatttatctttttaaaaata 109  Q
    |||||| |||| |||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||   ||||||||||||||||||| |||||||    
T  51607557 tttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaata 51607458  T
Q  110 taaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggg 209  Q
    |||||| ||||||  |||||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51607457 taaataaaacattttttttt---------taaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttaggg 51607367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 13913599 - 13913401
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaa--caccttatatttatctttttaaaaat 108  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||  |||||||||||||||||    || |||||||||||||||| ||||||    
T  13913599 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaat 13913500  T
Q  109 ataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    ||||||||| |||||||||||                   | ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  13913499 ataaatagatcattgcttttt--------taaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagg 13913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 3406414 - 3406617
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||  |||||| |||||||||||| ||||||||    
T  3406414 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3406513  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   |||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| |||||    
T  3406514 aaatagaacatcgctcttt-------taaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcaggga 3406606  T
Q  211 cggccctgtat 221  Q
    | |||||||||    
T  3406607 cagccctgtat 3406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 3440406 - 3440203
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||  |||||| |||||||||||| ||||||||    
T  3440406 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3440307  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   |||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| |||||    
T  3440306 aaatagaacatcgctcttt-------taaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcaggga 3440214  T
Q  211 cggccctgtat 221  Q
    | |||||||||    
T  3440213 cagccctgtat 3440203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 212
Target Start/End: Original strand, 16140055 - 16140244
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaat 114  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| | |  ||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16140055 gtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaat 16140154  T
Q  115 agaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacg 212  Q
    |||||||  || |||                   ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||    
T  16140155 agaacatcactcttt--------taaaaaaaatacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 50881426 - 50881540
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||| | |   |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  50881426 tttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 50881525  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  50881526 aaatagaacattgct 50881540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 41697254 - 41697072
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||  ||||| |||||||||| | || || |||||||||||| ||||||||    
T  41697254 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatat 41697155  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaat 201  Q
    ||||||||||| ||| |||                   ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  41697154 aaatagaacatcgctcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 38547137 - 38547041
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||| |||||||||  |||||| |||||||||||| |||||| ||||||||||||||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 38547041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 219
Target Start/End: Complemental strand, 21741029 - 21740851
Alignment:
Q  36 tgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttnnnnnn 135  Q
    |||||| | ||||||||||||| | || ||||| |||||||||||  |||||| |||||||||||| ||||||| ||||||||||||||| |||          
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  136 nnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctgt 219  Q
                 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  21740929 aaaaaata-----cattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctgt 21740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 27906714 - 27906646
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  27906714 gttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 27906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 6889736 - 6889805
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||    
T  6889736 cgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 6891582 - 6891651
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||    
T  6891582 cgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 22865447 - 22865378
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  22865447 cgttttgattttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 44895648 - 44895760
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| |||| |||||||      |  |  ||||||||||||||||||| ||||||||    
T  44895648 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatat 44895741  T
Q  111 aaatagaacattgcttttt 129  Q
    ||||||| ||||| |||||    
T  44895742 aaatagatcattgtttttt 44895760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 45758506 - 45758602
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||||||| ||||  ||||   |||||||||||||||||  ||||||||||| |||||| ||||||||||||||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattg 45758602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39134824 - 39134727
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatcttttta-aaaatataaatagaacattg 123  Q
    ||||||||||||||||  |||| ||| |||| |||| |||||  ||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattg 39134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 50881557 - 50881621
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  50881557 ttttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 33170771 - 33170873
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttca-catttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||| |||||||||||| |||| ||||||| |||||| |||||||||||||||||||||| || ||||||  |||| |||||| |||||| ||||||| |    
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttg-gtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattgtt 33170869  T
Q  126 tttt 129  Q
    ||||    
T  33170870 tttt 33170873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 34247153 - 34247208
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  34247153 cgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 34247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 27906834 - 27906788
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcac 57  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  27906834 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcac 27906788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 43235871 - 43235774
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatcttt--ttaaaaatataaatagaacatt 122  Q
    |||||||||||||||||||||| |||||||| |||| ||||||  ||||||||| ||| ||| |||||||||||    |||||| |||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 6889644 - 6889721
Alignment:
Q  48 tcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| | ||  |||||||||||||||| | || || |||||||||||| |||||||||||||||||||||||    
T  6889644 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgct 6889721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 6891490 - 6891567
Alignment:
Q  48 tcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| | ||  |||||||||||||||| | || || |||||||||||| |||||||||||||||||||||||    
T  6891490 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgct 6891567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 23185553 - 23185622
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||| |||||||||| ||   |||||||||||||||||||| ||| |||||||||    
T  23185553 cgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctg 23185622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6221690 - 6221785
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||| ||||||||| | ||||||||||||   |||||||| |||||||  ||| || |||||||| |||||||||| ||||||||||||||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatc-ttttaaaaatttaaatagaacattg 6221785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 22865538 - 22865460
Alignment:
Q  50 attttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgcttttt 129  Q
    |||||||| |||| |||||||| ||||||| | || ||| |||||||||||| ||||||||||||||||||||||| |||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 22865460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 1366857 - 1366797
Alignment:
Q  158 tttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||| ||||||||||||| |||||| |||||||| ||||| ||| ||||||||||    
T  1366857 tttatcactggcctcttttcattcccagagctgagcctccaaattcgtagagacggccctg 1366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 4971604 - 4971536
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||  |||||||||||| | || ||||||||| ||||||| |||||| ||||||    
T  4971604 gttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctg 4971536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 38853539 - 38853627
Alignment:
Q  32 ctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaaca 120  Q
    |||||||||||| |||| |||||||| ||||  | |||  ||||||||| ||||||| |||||||| ||| |||||| |||||||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 5533326 - 5533421
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaatagaacattg 123  Q
    ||||||||||||||| |||| |||||||| ||||| |||||  |||||||||  |||||| | ||||||||||  |||||| ||||||||| ||||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattg 5533421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 26803960 - 26804045
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaata 115  Q
    |||| |||||||||||| |||| |||||||| ||   ||||| ||||||||||| ||| ||| |||||||||||| |||||| ||||||    
T  26803960 ggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 44895775 - 44895832
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttag 207  Q
    ||||||||||| |||| ||||||||||||||| |||| |||| |||||||||| ||||    
T  44895775 gttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatttttag 44895832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 17322684 - 17322628
Alignment:
Q  67 taccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||   || || |||||||||||  |||||||||||||||||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacattg 17322628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 52127495 - 52127459
Alignment:
Q  183 cagagccgagcctccgaattcttagggacggccctgt 219  Q
    |||||||||||||||||||||| |||||||| |||||    
T  52127495 cagagccgagcctccgaattctcagggacggtcctgt 52127459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 20091398 - 20091196
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  20091398 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 20091299  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| ||||| |||||                   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20091298 aaatagatcattgtttttt------ttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaggga 20091205  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  20091204 cggccctgt 20091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 48983961 - 48983756
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  48983961 tttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 48983862  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| ||||| |||||                   |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  48983861 aaatagatcattgtttttt--ttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttaggga 48983764  T
Q  211 cggccctg 218  Q
    ||||||||    
T  48983763 cggccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 29077205 - 29077404
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |  ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  29077205 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 29077304  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29077305 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcaggga 29077396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 23551188 - 23550988
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaata 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||  |||||||    
T  23551188 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaata 23551089  T
Q  110 taaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggg 209  Q
    |||||||| |||||||||||                    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23551088 taaatagatcattgctttttttaaaaaaatat--------gttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaggg 23550997  T
Q  210 acggccctg 218  Q
    ||| |||||    
T  23550996 acgaccctg 23550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 24525802 - 24525599
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  24525802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatat 24525703  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| ||||                    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  24525702 aaatagaacattgttttt----aaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttaggga 24525607  T
Q  211 cggccctg 218  Q
    || |||||    
T  24525606 cgaccctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 18776883 - 18776683
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  18776883 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 18776784  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                     ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  18776783 aaatagaacattgctcttttaaaaaaaattata-------ttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcaggga 18776691  T
Q  211 cggccctg 218  Q
    ||||||||    
T  18776690 cggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 8171656 - 8171460
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  8171656 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 8171557  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   || |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  8171556 aaatagaacattgctcttt--------taaaaaaaatacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcaggga 8171465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 10329527 - 10329326
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||||| |||| || | || |||||||||  ||||||||||||||||||| ||||||||    
T  10329527 tttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatat 10329428  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |    
T  10329427 aaatagaacattgcttttt-------tttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaa 10329335  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  10329334 cggccctgt 10329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 10955469 - 10955579
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  10955469 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10955568  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  10955569 aaatagaacat 10955579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 47985083 - 47984885
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaa 113  Q
    ||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||  |||||||||||| ||||||  |||||||||||    
T  47985083 gtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaa 47984984  T
Q  114 tagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacgg 213  Q
    ||||||||||||||||                   ||||||||||||||||||| | ||||||||||| ||||||||||||  |||||||||||||||||    
T  47984983 tagaacattgcttttt------taaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacgg 47984890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 12596404 - 12596207
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| | || ||||||| |||||||||  |||||| |||||||||||  ||||||||    
T  12596404 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatat 12596305  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  12596304 aaatagaacatcgctcttt----------aaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggga 12596215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 19692079 - 19692193
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||   ||||||||||||||||||| ||||||||    
T  19692079 tttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatat 19692178  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  19692179 aaatagaacattgct 19692193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 38414993 - 38414879
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||||||||  ||||||||||||||||||| |||||||     
T  38414993 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatac 38414894  T
Q  111 aaatagaacattgct 125  Q
    ||||||||| |||||    
T  38414893 aaatagaacgttgct 38414879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 25010418 - 25010614
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaa--t 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||          ||||||||||||||||||| |||||  |    
T  25010418 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaaaat 25010507  T
Q  109 ataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    ||||||||| |||||||||||                   ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  25010508 ataaatagatcattgcttttttttttaaaaaata------cgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagg 25010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 8239670 - 8239869
Alignment:
Q  11 tttggtgttaggtgg--gggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaat 108  Q
    |||||||||| ||||  ||||||||||| |||||| || ||||||||||||||| ||||||| |||||||||  ||| |||||||||| |||| ||||||    
T  8239670 tttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaat 8239769  T
Q  109 ataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    |||||||||||||| || |||                   |||||| ||||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  8239770 ataaatagaacattactcttttaaaaaaaata--------cgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagg 8239861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 28749715 - 28749895
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttn 130  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||| |||||| |||     
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T
Q  131 nnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
                       ||||||||||||||| ||  |||||||||||| |||||||||||||||||||| | |||||||||||||    
T  28749814 gaaaaaaaaatat------gttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 26254015 - 26254178
Alignment:
Q  48 tcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttnnnnnnnnnnnnnnnnnn 147  Q
    |||||||||  |||| |||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||| |||                      
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatat----- 26254109  T
Q  148 ncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
      |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||    
T  26254110 --gttttgattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 2611363 - 2611267
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||  | || ||||||||  ||| ||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 2611267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 36891579 - 36891674
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||||||| |||| |||||||| ||||  ||||||| ||||||||||||| || |||| ||| ||| ||||||||||||||||||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 23020583 - 23020498
Alignment:
Q  28 gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaat 114  Q
    |||||||||||||||| |||| |||||||| |||||||||   ||||||||||||||||||||||||||||||| |||||| |||||    
T  23020583 gttcctcatgtatacggtagtgattttcacctttgagtgtgt-gcatatatacaacaccttatatttatcttttaaaaaatctaaat 23020498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 27237524 - 27237428
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||||||||||| |||||||| |||   |  | | ||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 27237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 9021898 - 9021812
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatag 116  Q
    |||||||||||||| |||| |||||||| |||| |||||||||||||||||  ||| || |||||||||||| |||||| |||||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 33162418 - 33162342
Alignment:
Q  49 cattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    ||||||||| |||  |||||||||||||||||  |||||| |||||||||||| ||||||||||||||| |||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgct 33162342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 40357366 - 40357311
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  40357366 cgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 40357311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 6765771 - 6765686
Alignment:
Q  38 tatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||| |||| |||||||| ||||  ||||| || ||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 19692210 - 19692279
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||  | |||||||||  ||||||||||| |||||||||||||||| |||||||    
T  19692210 cgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccctg 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 23859077 - 23859169
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||||||| |||| |||||||  |||| ||||| |||||||||||   || || |||||||||||| |||||| |||||||||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 20153206 - 20153297
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||||||  ||| |||||||  |||| || || |||||||||||||||| || |||||||||||| |||||| |||||| ||||||    
T  20153206 cctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 38414862 - 38414793
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||| |||   |||||||||||  ||||| |||||||||||||||||||||||| |||||    
T  38414862 cgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctg 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 7398452 - 7398548
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| | |||| |||||||| |||  ||||| | ||||||||   |||||| |||||||||||  |||||| ||||||||||||||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattg 7398548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 12981327 - 12981422
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||| |||||  |||| |||||||| |||| ||||||||| ||||||    ||||| |||||||||||| |||||  |||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 10955605 - 10955671
Alignment:
Q  152 tttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||| ||||||||||||| ||||||| | |||| ||||||||||||||| | |||| ||||||    
T  10955605 tttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagccctg 10955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 36903022 - 36902929
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||  || | |||||||| |||  ||||||  ||||||||| ||| ||| ||||||||| || |||||| ||||||||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattg 36902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 33162325 - 33162257
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccct 217  Q
    |||||| ||||||||| ||||||||||||| || |||| ||||  ||||||||||||||| | ||||||    
T  33162325 cgttttaattttatcattgacctcttttcactcccagaaccgaatctccgaattcttaggaatggccct 33162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 21763670 - 21763595
Alignment:
Q  45 tagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaaca 120  Q
    |||| |||||||| |||  ||||| ||||||||||| | || || |||||||||||| |||||| |||||||||||    
T  21763670 tagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 23744834 - 23744893
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| |  |||||| |||||||||||| |||||| ||| ||||||||||    
T  23744834 gtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattg 23744893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 38971255 - 38971341
Alignment:
Q  28 gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaata 115  Q
    ||||||| ||| |||| |||| ||||||||||||  |||||   ||||||||| ||||||| |||||||| |||||||||| ||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatc-ttttaaaaatttaaata 38971341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 9014233 - 9014183
Alignment:
Q  73 atatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||| || |||||||||||| |||||| |||||| |||||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattg 9014183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 42600767 - 42600967
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  42600767 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 42600866  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||||||||||                   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42600867 aaatagatcattgcttttt-------taaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttaggga 42600959  T
Q  211 cggccctg 218  Q
    ||||||||    
T  42600960 cggccctg 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 23798379 - 23798179
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  23798379 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23798280  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  23798279 aaatagaacattgctcttt-------aaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttaggga 23798187  T
Q  211 cggccctg 218  Q
    ||||||||    
T  23798186 cggccctg 23798179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 23606747 - 23606548
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  23606747 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23606648  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  23606647 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttaggga 23606556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 10917376 - 10917576
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  10917376 tttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10917475  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| ||||| |||||                   ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  10917476 aaatagatcattgtttttt--------ttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaagga 10917567  T
Q  211 cggccctgt 219  Q
    | |||||||    
T  10917568 cagccctgt 10917576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 45475802 - 45476001
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  45475802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 45475901  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||    
T  45475902 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcaggga 45475993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 2952339 - 2952137
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||||||||||||||  ||| || |||||||||||| ||||||||    
T  2952339 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 2952240  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  2952239 aaatagaacattgctctttttaaaaaaaaattat-----gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 2952145  T
Q  211 cggccctg 218  Q
    ||||||||    
T  2952144 cggccctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 13534804 - 13534609
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  || ||| |||||||||||| ||||||||    
T  13534804 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13534706  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||    
T  13534705 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcaggga 13534614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 13624344 - 13624149
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  || ||| |||||||||||| ||||||||    
T  13624344 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13624246  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||    
T  13624245 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcaggga 13624154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 30883314 - 30883512
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  ||| || |||||||||||| ||||||||    
T  30883314 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatat 30883413  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||| ||||||| |||||    
T  30883414 aaatagaacattgctcttttaaaaaaaaattat------gttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcaggga 30883507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 37430276 - 37430076
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| ||| |||||||||||||||||| |||||||||| || | |  ||||| |||||||||||  |||||| |||||||||||| ||||||||    
T  37430276 tttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatat 37430177  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  37430176 aaatagaacatcgctcttt-------taaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggga 37430084  T
Q  211 cggccctg 218  Q
    ||||||||    
T  37430083 cggccctg 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 41879166 - 41879364
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||| ||||  ||||||||||||||||   ||||| |||||||||||| ||||||||    
T  41879166 tttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 41879265  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| | |||                   |||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||    
T  41879266 aaatagaacattgttcttt---------taaaaaaatacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcaggga 41879356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 15167517 - 15167421
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattg 15167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 5860862 - 5860748
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| |||||| |||||||||| | ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  5860862 tttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5860763  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  5860762 aaatagaacattgct 5860748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 15078759 - 15078854
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||||||||||||||| ||||||||||||| |||||  ||||||||||| ||||||||||||||||||| |||| | |||||||||||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 3048635 - 3048435
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||  | |  |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  3048635 tttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3048536  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||| | |||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| || ||    
T  3048535 aaatagtatattgctcttttaaaaaaaattat-------gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagaga 3048443  T
Q  211 cggccctg 218  Q
    ||||||||    
T  3048442 cggccctg 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 11290185 - 11290281
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||| |||||||||||| |||| |||||||| |||||||||||  ||||||||| ||||||| |||||||||||| |||||| |||||| |||||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattg 11290281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39332507 - 39332411
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||||||| ||||  |||||||| ||||||  ||||||| ||||||||||||||||||  ||||||||||||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattg 39332411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 20003797 - 20003728
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||| |||||||||||||    
T  20003797 cgttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 30674482 - 30674409
Alignment:
Q  50 attttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||| || ||||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattg 30674409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 8102913 - 8103008
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||||||| || | |||||||| |||  |||||||||||||||||  |||||| |||||||||||| |||||| |||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaa 107  Q
    ||||||||||||||||| |||| |||||||| |||| |||||||||| |||||| ||| ||| |||||||||||| |||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 7944624 - 7944528
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||  |||||||||  |||||| ||||||| |||| |||||| |||||| |||||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattg 7944528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 8646215 - 8646302
Alignment:
Q  35 atgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| |||| ||||||||||||| |||||  |||||||||| | ||||| |||||||||||| |||||| ||||||||||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacattg 8646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 14510084 - 14509989
Alignment:
Q  27 ggttcctcatgtatacgatagtcatttt-cacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||| |||||||||||| |||| ||||| |||||||| ||||||||  ||||||| ||||||||||||| |||||| |||||| ||||| ||||||||    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacattg 14509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 5973209 - 5973113
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| |||||||| || | |||||||  | || ||||||  ||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 5973113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacat 121  Q
    ||||||||| ||||||| |||| |||||||| |||| ||||||||  ||||||   |||||| |||||||||||| |||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 5860728 - 5860674
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  5860728 gttttgattttatcattgacctcttttcatttccagagccgagcctccaaattct 5860674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 34789959 - 34789870
Alignment:
Q  32 ctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacat 121  Q
    |||||||||||| |||| |||||||| |||| ||||||  ||||||||| ||| ||| |||||||||||| | | || ||||||||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacat 34789870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 41677276 - 41677179
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaatagaacattg 123  Q
    ||||||||||||||||  |||| |||||||| |||   |||| ||||||||||| ||| ||| ||||||||||||  |||||| ||||||||||||||    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattg 41677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 25561595 - 25561502
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||||||||||  ||| ||||||||||||| || || |||||||||||  |||||| |||||||| ||| ||| || |||||||||||||    
T  25561595 ggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacatt 25561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 23941193 - 23941097
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| | |||| ||| || |||||||  |||| ||||| ||| ||||||  ||||||| |||||||||||| |||||| |||||| |||||||    
T  23941193 ggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacattg 23941097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 33963313 - 33963268
Alignment:
Q  173 ttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||| ||||||||||||||||||| | | |||||||||    
T  33963313 ttttcattctcaaagccgagcctccgaattctcatgaacggccctg 33963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 16198909 - 16198709
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  16198909 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatat 16198810  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  16198809 aaatagaacattgcttttt-------aaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggga 16198717  T
Q  211 cggccctg 218  Q
     |||||||    
T  16198716 aggccctg 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 38869478 - 38869279
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  38869478 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 38869379  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38869378 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttaggga 38869287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 27078996 - 27079197
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  27078996 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 27079095  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27079096 aaatagaacattgctcttt------taaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaggga 27079189  T
Q  211 cggccctg 218  Q
    ||||||||    
T  27079190 cggccctg 27079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 28822457 - 28822253
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  28822457 tttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 28822358  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||    
T  28822357 aaatagaacattgctcttt--taaaaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttaggga 28822260  T
Q  211 cggccct 217  Q
    |||||||    
T  28822259 cggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 9364276 - 9364476
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  9364276 tttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9364375  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||||||                    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||     
T  9364376 aaatagaacattgctttt-------aaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattcttagggg 9364468  T
Q  211 cggccctg 218  Q
     |||||||    
T  9364469 tggccctg 9364476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 30854314 - 30854428
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  30854314 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 30854413  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  30854414 aaatagaacattgct 30854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 16799442 - 16799240
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| |||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||  |||||||||||||| |||| ||||||||    
T  16799442 tttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatat 16799343  T
Q  111 aaatagaacat-tgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggg 209  Q
    ||||||||||| | || |||                   ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  16799342 aaatagaacatttactcttttaaaaaaaaaata------cgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttaggg 16799249  T
Q  210 acggccctg 218  Q
    |||||||||    
T  16799248 acggccctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 7670909 - 7671119
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaata 109  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||| |||| |||||||| | ||||||  |||||||||||||||||||  |||||||    
T  7670909 tttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaata 7671008  T
Q  110 taaatagaacattgc-tttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagg 208  Q
    ||||||||||||||| |||||                   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |    
T  7671009 taaatagaacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaag 7671108  T
Q  209 gacggccctgt 219  Q
    |||||||||||    
T  7671109 gacggccctgt 7671119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 36187994 - 36187795
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| ||||||| |||| ||||||||    
T  36187994 tttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatat 36187895  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  36187894 aaatagaacatcgctcttt--------taaaaaaaaaacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcaggga 36187803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 15480204 - 15480006
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| | || ||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  15480204 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatat 15480105  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| | | |||                    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  15480104 aaatagaacatcggtctttaaaaaaaatat---------gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggga 15480014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 40389647 - 40389535
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaat 114  Q
    ||||||||||||||||||||||  ||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  40389647 gtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaat 40389548  T
Q  115 agaacattgcttt 127  Q
    |||||||||||||    
T  40389547 agaacattgcttt 40389535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 16592189 - 16591990
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| | || ||||||||||||||||| ||||| | ||||||||||||  |||||||    
T  16592189 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatat 16592090  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    ||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | |||    
T  16592089 aaatagaacattgctcttttaaaaaaaatat--------gttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaagga 16591998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 34756481 - 34756367
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  34756481 tttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 34756382  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  34756381 aaatagaacattgct 34756367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 19523184 - 19523380
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  19523184 tttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 19523283  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||  ||| |||                   |||||||||||||||||||  |||||||||||| |||||||||||||||||||||| |||||    
T  19523284 aaatagaacaccgctcttt-------aaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcaggga 19523376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 27924067 - 27924267
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||| ||| |||||||||||||||| |||||||||| || ||||  ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  27924067 tttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27924166  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||  |||||||||||                   ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||  |    
T  27924167 aaataggtcattgcttttt-------tttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttagaaa 27924259  T
Q  211 cggccctg 218  Q
    ||||||||    
T  27924260 cggccctg 27924267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 2274875 - 2275070
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| | || |||||| |||||||||| | ||||| |||||||||||| ||||||||    
T  2274875 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatat 2274974  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||    
T  2274975 aaatagaacatcgctcttt-------taaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcaggga 2275067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 22986658 - 22986473
Alignment:
Q  26 gggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    ||||| |||||||||||| ||||||||||||| | || ||||||||||||||||| |||| || ||||| |||||| |||||||| ||||||||||||||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgct 22986559  T
Q  126 ttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
     |||                   ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  22986558 cttt-------taaaaaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctg 22986473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 23284164 - 23284063
Alignment:
Q  24 gggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||| ||||||| ||||||   ||| |||||||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  124 ct 125  Q
    ||    
T  23284064 ct 23284063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 36868973 - 36868879
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||  ||||||||||||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattg 36868879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 31194706 - 31194528
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttn 130  Q
    ||||||||||||| |||| |||||||| | || || ||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||| |||     
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt- 31194609  T
Q  131 nnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
                      |||||||||||||||||||  |||||||||||| |||||||||||||||||||| | |||||||||||||    
T  31194608 -------taaaagaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 7338021 - 7338098
Alignment:
Q  48 tcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| |||  ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgct 7338098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 40389518 - 40389461
Alignment:
Q  153 ttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttaggga 40389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 1366625 - 1366529
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||| |||||| |||| ||||||||||||  ||||| ||||||||||| ||| ||| |||||||||| | |||||| ||||||||||||||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattg 1366529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 14318484 - 14318388
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||||||  ||||  |||| | ||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 14318388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 26719045 - 26718953
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||| || |||| |||||||| |||||||||| ||||||||||| |||| || |||||||||||| |||| | |||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 26988789 - 26988697
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||| || |||| |||||||| |||||||||| ||||||||||| |||| || |||||||||||| |||| | |||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 2412089 - 2412185
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||  |||| |||||||||||||  || | ||||||||||| |||| || ||||||| |||| |||||| ||||||||||||||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattg 2412185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 34756349 - 34756289
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  34756349 gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 34756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||||||  |||| |||||||| ||||  ||||||| |||||||| |||| || |||||||||||| |||||  |||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 10543682 - 10543769
Alignment:
Q  35 atgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||| |||| |||||||| ||||  |||| |||||||||||| ||||||||||||||||||| |||||| ||| | |||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacatt 10543769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 24395741 - 24395835
Alignment:
Q  28 gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||| |||||| | || |||||||| ||||  ||||  | |||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 31881417 - 31881348
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||  |||| | |||||||||||||    
T  31881417 cgttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctg 31881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 41911716 - 41911636
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaa 107  Q
    |||||||||| ||||||||||| ||||| || |||| ||||||||| ||||||| ||||||| ||||| |||||| |||||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaa 41911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 30854445 - 30854511
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    |||||| |||||||| ||||||| ||||||||| ||||||||||||||| |||| | ||||||||||    
T  30854445 cgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 31881528 - 31881435
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    ||||||||||||| |||| |||||||  | ||  ||| ||||||||||||  |||| | |||||||||||| |||||||||||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgct 31881435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 23284012 - 23283943
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||| |||||||||||||  | | | ||||||| ||||||| |||||||||||||    
T  23284012 cgttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 33037781 - 33037877
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| || |  ||||||| |||| ||||||  ||||||||| | | ||| |||||||||||| |||||| |||||| |||||||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattg 33037877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 7338115 - 7338170
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||| ||||||    
T  7338115 cgttttgattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 10407464 - 10407558
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| ||||| |||| |||||||| |||   |||||  ||||| ||| ||||||| | |||||||||| |||||| ||||||||||||||    
T  10407464 ttcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattg 10407558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 2024738 - 2024645
Alignment:
Q  30 tcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||| | |||| |||||||  |||| ||||| | |||||||||  ||| || |||||||||||  |||||| ||||||||||||||    
T  2024738 tcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattg 2024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 11242417 - 11242321
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||| ||  ||||  |||| | |||||||||| ||  || |||||||||||| |||||  ||||||||||||||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattg 11242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 34425904 - 34426000
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| || | ||||| |  |||  ||||| | |||||||||  |||||| |||||||||||| ||||||  |||||||||||||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattg 34426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 22648790 - 22648739
Alignment:
Q  72 catatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| |||| || |||||||||||| |||||| ||||||||||||||    
T  22648790 catatatacgacacattgtatttatcttttaaaaaatttaaatagaacattg 22648739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 606210 - 606251
Alignment:
Q  82 acaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| |||||||||||| |||||| ||||||||||||||    
T  606210 acaccttgtatttatcttttaaaaaatttaaatagaacattg 606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 15639644 - 15639717
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatcttt 100  Q
    ||||||| |||||||||| ||| |||||||  ||||  |||| |||||||||||  |||||| |||||||||||    
T  15639644 ggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatcttt 15639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 106523 - 106724
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  106523 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 106622  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| | |||                   ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  106623 aaatagaacattgttcttt-------taaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttaggga 106715  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  106716 cggccctgt 106724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 34290754 - 34290553
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  34290754 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34290655  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| |||||                   ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  34290654 aaatagaacattgtttttt-------taaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaagga 34290562  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  34290561 cggccctgt 34290553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 43207355 - 43207156
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  43207355 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 43207257  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||| | |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  43207256 aaatagaacattgctcttt--------taaaaaaaatacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttaggga 43207165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 44708465 - 44708660
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||  ||||||||||||||||||| ||||||||    
T  44708465 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatat 44708564  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||| ||||||                   ||||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||||    
T  44708565 aaatagaacatttcttttt--------ttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttaggga 44708656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 47467672 - 47467872
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||| |||||||||||  |||||| |||||||||||| ||||||||    
T  47467672 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatat 47467771  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||| ||| |||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  47467772 aaatagaacatcgctcttt-------aaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcaggga 47467864  T
Q  211 cggccctg 218  Q
    ||||||||    
T  47467865 cggccctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 50939351 - 50939152
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||| |||||||||||||||||||| |||||||||| || |||| |||||||  ||||||||  ||||||||||||||||||| ||||||||    
T  50939351 tttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatat 50939252  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||||||||||                   ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  50939251 aaatagatcattgcttttt--------ttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttaggga 50939160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 8073455 - 8073257
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  8073455 tttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 8073357  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||| || |||                   ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  8073356 aaatagaacattactcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcaggga 8073265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 37168359 - 37168551
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaat 114  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||| || |||| |||||||||  ||||||||||||||||||| ||||||||||||    
T  37168359 gtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaat 37168458  T
Q  115 agaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggc 214  Q
    ||||||||| |||||                   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  37168459 agaacattgtttttt-------taaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 54407275 - 54407073
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  54407275 tttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54407177  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||| |||||                   ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  54407176 aaatagaacattgtttttt----ttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttaggga 54407081  T
Q  211 cggccctg 218  Q
    ||||||||    
T  54407080 cggccctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 21582759 - 21582960
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  21582759 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21582858  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||| ||||||| | |||                   ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||    
T  21582859 aaataaaacattgttcttt------taaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcaggga 21582952  T
Q  211 cggccctg 218  Q
    ||||||||    
T  21582953 cggccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 53507002 - 53506884
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||   |||||||||||||||||| ||||||||    
T  53507002 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 53506903  T
Q  111 aaatagaacattgcttttt 129  Q
    ||||||||||||| |||||    
T  53506902 aaatagaacattgtttttt 53506884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 54619321 - 54619207
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  54619321 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 54619222  T
Q  111 aaatagaacattgct 125  Q
    |||||||||||||||    
T  54619221 aaatagaacattgct 54619207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 9878805 - 9878691
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  9878805 tttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatat 9878706  T
Q  111 aaatagaacattgct 125  Q
    |||||||| ||||||    
T  9878705 aaatagaatattgct 9878691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 27078687 - 27078486
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||||| | || || ||||||||||||||  ||| || |||||||||||| ||||||||    
T  27078687 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27078588  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||    
T  27078587 aaatagaacattgcttttttaaaaaaaaattat------gttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcaggga 27078494  T
Q  211 cggccctg 218  Q
    ||||||||    
T  27078493 cggccctg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 27084484 - 27084283
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||||| | || || ||||||||||||||  ||| || |||||||||||| ||||||||    
T  27084484 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27084385  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||||||||||                    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||    
T  27084384 aaatagaacattgcttttttaaaaaaaaattat------gttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcaggga 27084291  T
Q  211 cggccctg 218  Q
    ||||||||    
T  27084290 cggccctg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 38681211 - 38681011
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| | ||  ||||||||||| ||||  |||||| |||||||||||| ||||||||    
T  38681211 tttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatat 38681112  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  38681111 aaatagaacattgctcttttaaaaaaaattat-------gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 38681019  T
Q  211 cggccctg 218  Q
    ||||||||    
T  38681018 cggccctg 38681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 53149432 - 53149322
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  | ||||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  53149432 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 53149333  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  53149332 aaatagaacat 53149322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 3954014 - 3953902
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  3954014 tttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3953915  T
Q  111 aaatagaacattg 123  Q
    |||||||||||||    
T  3953914 aaatagaacattg 3953902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 36716143 - 36715941
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||| ||||| ||||||| | ||| ||||||| | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  36716143 tttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 36716044  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    ||||| |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  36716043 aaatagaacattgctcttttaaataaaaattat------gtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 36715950  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  36715949 cggccctgt 36715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 42098789 - 42098899
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||  |||||| |||||||||||| ||||||||    
T  42098789 tttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 42098888  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  42098889 aaatagaacat 42098899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 18372467 - 18372656
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgc----atatatacaacaccttatatttatctttttaaaa 106  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||| | || |||||||||    |||||||| ||||||| |||||||||||| ||||    
T  18372467 tttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaa 18372566  T
Q  107 atataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattct 204  Q
    ||||||||||||||||||| |||                   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  18372567 atataaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattct 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 48720498 - 48720427
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctgta 220  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  48720498 cgttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctgta 48720427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 50258731 - 50258542
Alignment:
Q  22 gtgggggttcctcatgtatacgatagtcattttcacattt-gagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaaca 120  Q
    |||||||||||||||| |||| ||||||||||||||  |  | ||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  121 ttgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    | ||| |||                    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| |||||||||    
T  50258631 tcgctctttttaaaaaaatat--------gttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctg 50258542  T

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Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 32319257 - 32319162
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||| | |||| |||||| |||||||| |||| |||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

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Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  156 attttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

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Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 215
Target Start/End: Original strand, 36605973 - 36606149
Alignment:
Q  31 cctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaa-tataaatagaacattgcttttt 129  Q
    ||||||||||||| |||| |||||||  | || |||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||| | |    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctat 36606071  T
Q  130 nnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
                       ||||||||||||||||||||||||||||||||  ||||||||| |||||||||| | ||||||||||    
T  36606072 taaaaaaaata--------cgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

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Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 29620504 - 29620423
Alignment:
Q  13 tggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatattt 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| | ||  | ||||||||||||||  |||||| |||||    
T  29620504 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 48157127 - 48157310
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||| ||||| |||||||||||||||||||||  ||||||||||||| |||| |||||||||          ||||||||||||||||||| ||||||||    
T  48157127 tttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 48157216  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||||| ||||                    |||||||||||||||||| |||||||| |||| | || |||||||||||||||||||||||    
T  48157217 aaatagatcattgcattttttttaaaaatgt--------gttttgattttatcactggcctctttttattcccggaaccgagcctccgaattcttaggga 48157308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 53506869 - 53506802
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||| |||||||||||    
T  53506869 gttttgattttatcactggcctctcttcattcccagagccgagccttcgaattctta-ggacggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 54574929 - 54574833
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| | |||| ||||| || |||| |||||||||||||||||   ||||| ||||||| |||| |||||| ||||||||||||||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattg 54574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 54619189 - 54619121
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||| || | ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  54619189 gttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccctg 54619121  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 8420330 - 8420425
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||| | ||||||  ||| ||||||||||||| ||||||  |||||||||  |||||| |||||||||||| |||||| |||||||||||||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 42098922 - 42098989
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||| ||||||||||||  | |||| |||||| |||||||| |||||||||||||    
T  42098922 ttttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctg 42098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 3953882 - 3953816
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccct 217  Q
    |||| |||||||||||| ||||||||||||  |||||| || |||||||||||| ||||||||||||    
T  3953882 ttttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 26279564 - 26279642
Alignment:
Q  45 tagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||| |||||||  |||| |||||  |||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  26279564 tagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattg 26279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 28689458 - 28689368
Alignment:
Q  32 ctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||  ||| |||||||| ||||  | || |||||||||||  |||||| ||||||||||||| ||||| |||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 23641382 - 23641329
Alignment:
Q  65 tgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaa 118  Q
    |||||||||||||||| |||| || |||||||||||| ||||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 49393099 - 49393189
Alignment:
Q  32 ctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||| |||| ||||| || |||| ||||||  ||||||||| || |||| |||||||||||| |||||| |||| |||||||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattg 49393189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 53149301 - 53149235
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    |||||||||||||||||||  |||||||||||| | || | ||||||||||||||| || |||||||    
T  53149301 cgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggcc 53149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 25855426 - 25855521
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||| || |||||||| |||| |||||||  |||| ||| ||  ||||||||| ||||||| |||| ||||||| |||||| ||||||||||||||    
T  25855426 ggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattg 25855521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 42453445 - 42453504
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||| ||||||||||  ||||||| |||||||||||| |||||| ||||| ||||||||    
T  42453445 gtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattg 42453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 9878675 - 9878642
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattct 182  Q
    ||||| ||||||||||||||||||||||||||||    
T  9878675 cgtttagattttatcactgacctcttttcattct 9878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 789940 - 790036
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| | | || ||||| || |||| ||||||  ||||||||  ||||||| |||||||  ||| |||||| ||||||||| ||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattg 790036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 27506858 - 27506659
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||| |||||||||||||||  |||||||||| || |||| ||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  27506858 tttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 27506759  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||| |||||||||||                   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27506758 aaatagatcattgcttttt--------tttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaggga 27506667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 24410420 - 24410623
Alignment:
Q  11 tttggtgttaggtgggg-gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaata 109  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||| |||||||    
T  24410420 tttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 24410519  T
Q  110 taaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggg 209  Q
    |||||||||||||| |||||                   ||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||||||    
T  24410520 taaatagaacattgtttttt-----aaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttaggg 24410614  T
Q  210 acggccctg 218  Q
    |||||||||    
T  24410615 acggccctg 24410623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 10762683 - 10762488
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||| |||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||    
T  10762583 aaatagaacattgctcttt---------aaaaaaaaaacgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttaggga 10762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 29939980 - 29939781
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||| | ||||||||    
T  29939980 tttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatat 29939881  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                   |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  29939880 aaatagaacattgctcttt--------taaaaaaaatacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcaggga 29939789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 26716116 - 26716314
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaa 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||   |||||||||||||||||||  |||||||||||    
T  26716116 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaa 26716215  T
Q  114 tagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacgg 213  Q
    |||||||||||| |||                   ||||||||||||||||||||||||||||||||| || |||||||||  |||||||||||||||||    
T  26716216 tagaacattgctcttt-------taaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacgg 26716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 4505878 - 4506078
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || | || |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  4505878 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 4505977  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  4505978 aaatagaacattgctcttttaaaaaaaattat-------gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 4506070  T
Q  211 cggccctg 218  Q
    ||||||||    
T  4506071 cggccctg 4506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 3155201 - 3155402
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |  |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  3155201 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3155300  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                    ||||| ||||||||||||||||||||||||| | | ||||||||||||||||||| |||||    
T  3155301 aaatagaacattgctcttttaaaaaaaattat-------gttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcaggga 3155393  T
Q  211 cggccctgt 219  Q
    |||||||||    
T  3155394 cggccctgt 3155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 12337566 - 12337362
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||||| ||||||||  ||||||| |||||||||||| ||||||||    
T  12337566 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatat 12337467  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                     ||||||||||||||||| ||||||||||||  ||||||||||||| |||||||| |||||    
T  12337466 aaatagaacattgctcttttaaaaaaaaattata------ttttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcaggga 12337373  T
Q  211 cggccctgtat 221  Q
    |||||||||||    
T  12337372 cggccctgtat 12337362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 6964991 - 6965186
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  ||| || |||||||||||| ||||||||    
T  6964991 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 6965090  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    ||||||||||||||| |||                     ||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  6965091 aaatagaacattgctcttttaaaaaaaatta---------ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 6965181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 9046017 - 9046126
Alignment:
Q  15 gtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaa 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||  |||||||||||    
T  9046017 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaa 9046116  T
Q  114 tagaacattg 123  Q
    ||||||||||    
T  9046117 tagaacattg 9046126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 8907197 - 8906996
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    |||||||||||||||||||| |||||||||||| |||||||||| || | || |||||||||||||||||  | |||| |||||||||||| ||||||||    
T  8907197 tttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatat 8907098  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||||| || |||                    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |    
T  8907097 aaatagaacattactcttttaaaaaaaaattat------gttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaa 8907004  T
Q  211 cggccctg 218  Q
    ||||||||    
T  8907003 cggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 7162768 - 7162878
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||| | ||||| ||||||||||||||  |||||| |||||||||||| ||||||||    
T  7162768 tttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 7162867  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  7162868 aaatagaacat 7162878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 3952990 - 3953100
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||| | || ||||||||||| |||||  |||||| |||||||||||| ||||||||    
T  3952990 tttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatat 3953089  T
Q  111 aaatagaacat 121  Q
    |||||||||||    
T  3953090 aaatagaacat 3953100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 38400798 - 38400894
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| |||||||| ||||| |||| ||||||||||  ||||||| |||||||||||| |||||| ||||||||||||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattg 38400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 40636175 - 40636317
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatc 163  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||                    ||||||||||||||    
T  40636175 gtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatat--------gttttgattttatc 40636266  T
Q  164 actgacctcttttcattctcagagccgagcctccgaattcttagggacggc 214  Q
    |||| ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  40636267 actggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 16097008 - 16097104
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||| | |||| |||||||| |||| ||||||  |||||||||  |||||| |||||||||||| |||||| ||||||||||||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 16097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 21665802 - 21665706
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||||||||||| |||| ||||||||||||   |||| | ||||||||| ||||| | |||||||||||| |||||| ||||||||||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattg 21665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 28425812 - 28425716
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||| |||| | |||| ||||||||||||| |||||| |||||||||| ||||||| |||||||||||| |||  | ||||||||||||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattg 28425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 34693993 - 34694073
Alignment:
Q  45 tagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| || | || ||||||| |||||||||  |||||| |||||||||||| |||||||||||||||||||||||    
T  34693993 tagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 34694073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 34716405 - 34716485
Alignment:
Q  45 tagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||| || | || ||||||| |||||||||  |||||| |||||||||||| |||||||||||||||||||||||    
T  34716405 tagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 34716485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 3953121 - 3953188
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||||||||||||||  || |||||||||||| |||||| ||||||| |||||    
T  3953121 ttttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctg 3953188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 24035645 - 24035551
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||| || |||| |||||||| |||  ||||| ||||| |||||  |||||| |||||||||||| |||||| ||||||||||||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 24035551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 7742236 - 7742139
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttt-taaaaatataaatagaacattg 123  Q
    ||||||||||| ||||||||||  ||||||| ||||  |||| ||||||||||  |||| || ||||||||||||  |||||||||||||||||||||    
T  7742236 ggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattg 7742139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 8327732 - 8327801
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||||| |||||||||||  |||| | ||||||||||||| |||||||||| ||||    
T  8327732 cgttttgattttatcactgatctcttttcatttccagaactgagcctccgaatttttagggacggtcctg 8327801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 9046144 - 9046213
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    ||||||||||||||||||| |||||||| |||| |||||| |||||  ||||||||| ||||||||||||    
T  9046144 cgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 13800647 - 13800550
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacattt-gagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||| ||||||   |||| |||||||| ||| | ||||| |||||||||||  ||||||||||||||||||| |||||| ||||||||||||||    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattg 13800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 1396685 - 1396617
Alignment:
Q  150 gttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| ||||||||||||  ||||| |||||||||||||||| | ||| |||||||    
T  1396685 gttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattctcaaggaaggccctg 1396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 5952705 - 5952642
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacg 212  Q
    |||||||||||||||| || |||||||||||||  |||||||| |||||||||||| |||||||    
T  5952705 cgttttgattttatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 8327674 - 8327720
Alignment:
Q  83 caccttatatttatctttttaaaaatataaatagaacattgcttttt 129  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattgcttttt 8327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34694089 - 34694155
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    ||||||||||||||||| | ||||||||||||  |||| |||| |||||||||||| ||||||||||    
T  34694089 cgttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34716501 - 34716567
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggcc 215  Q
    ||||||||||||||||| | ||||||||||||  |||| |||| |||||||||||| ||||||||||    
T  34716501 cgttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttat 96  Q
    ||||||||||||||||| |||| |||||||| |||| |||||  |||||||||| ||||||| |||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 12134142 - 12134046
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| ||||||||| |||| |||||||| |||| ||||| |||||||||||   ||||| |||||||||||| ||   | ||||||||||||||    
T  12134142 ggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattg 12134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 7162900 - 7162967
Alignment:
Q  151 ttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||| |||||||||||| ||||||||||||| | |||| |||||| |||| ||| |||||||||||||    
T  7162900 ttttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctg 7162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 42029200 - 42029241
Alignment:
Q  82 acaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  42029200 acaccttatatttatcttttaaaaaatttaaatagaacattg 42029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 16227425 - 16227374
Alignment:
Q  72 catatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||||| ||||    
T  16227425 catatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattg 16227374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 3400140 - 3400174
Alignment:
Q  184 agagccgagcctccgaattcttagggacggccctg 218  Q
    |||||||||||||||||| ||||||||||||||||    
T  3400140 agagccgagcctccgaatacttagggacggccctg 3400174  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 5952780 - 5952721
Alignment:
Q  64 gtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgct 125  Q
    |||||||||||||||||  |||||| ||||||||||||  |||| ||||||| |||||||||    
T  5952780 gtgtaccgcatatatacggcaccttgtatttatctttt--aaaaaataaatataacattgct 5952721  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 22727598 - 22727529
Alignment:
Q  33 tcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatcttttt 102  Q
    ||||||||| | |||| |||||||| |||| |||||||||||||||||  ||| |  |||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatcttttt 22727529  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 11912859 - 11912763
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||| ||||||||| |||| |||||||  ||||  ||||  ||||||||||  ||| || ||||||| |||||  |||| ||||||||||||||    
T  11912859 ggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattg 11912763  T

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Target: scaffold0070 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 1328 - 1527
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||||||||||||||  || ||| |||||||||||| ||||||||    
T  1328 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatat 1427  T
Q  111 aaatagaacattgctttttnnnnnnnnnnnnnnnnnnncgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttaggga 210  Q
    |||||||||| |||| |||                   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  1428 aaatagaacagtgctcttt--------taaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcaggga 1519  T

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Target: scaffold1590 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 360 - 264
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 264  T

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Target: scaffold1320 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 1355 - 1450
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    |||||||||||||||||||||| ||||||||||||| |||||  ||||||||||| ||||||||||||||||||| |||| | |||||||||||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

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Target: scaffold0097 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 38926 - 39027
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattgctt 126  Q
    |||||||||| |||||| |||| ||||||||||||| ||||| ||||||||||| ||||||| |||||||||||| |||||| |||||||||||||| ||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttt 39025  T
Q  127 tt 128  Q
    ||    
T  39026 tt 39027  T

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Target: scaffold0012 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 206591 - 206496
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacatt 122  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||  ||||| |||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

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Target: scaffold0007 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 230960 - 230865
Alignment:
Q  28 gttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    |||||||||||||| | |||| |||||||| |||| || || |||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattg 230865  T

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Target: scaffold0182 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 24093 - 23999
Alignment:
Q  29 ttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||| ||| ||||| || | |||||||| |||| ||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||| ||||    
T  24093 ttccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattg 23999  T

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Target: scaffold0001 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 183175 - 183244
Alignment:
Q  149 cgttttgattttatcactgacctcttttcattctcagagccgagcctccgaattcttagggacggccctg 218  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||||||||    
T  183175 cgttttaattttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccctg 183244  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 181904 - 181969
Alignment:
Q  11 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatat 76  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | ||  ||||||||||||    
T  181904 tttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 183106 - 183155
Alignment:
Q  72 catatatacaacaccttatatttatctttttaaaaatataaatagaacat 121  Q
    ||||||||| | || || |||||||||||| |||||||||||||||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacat 183155  T

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Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 173612 - 173516
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaatataaatagaacattg 123  Q
    ||||||||| ||||||| |||| ||||| || |||| ||||| |||||||||||   ||||| |||||||||||| |||||| ||||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 40086 - 40184
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaata--taaatagaacattg 123  Q
    |||| |||||||||||||| || |||||||| || | ||||||  |||| ||||  |||||| |||||||||||| ||||| |  ||||||||||||||    
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 40184  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 138146 - 138244
Alignment:
Q  27 ggttcctcatgtatacgatagtcattttcacatttgagtgtaccgcatatatacaacaccttatatttatctttttaaaaata--taaatagaacattg 123  Q
    |||| |||||||||||||| || |||||||| || | ||||||  |||| ||||  |||||| |||||||||||| ||||| |  ||||||||||||||    
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 138244  T

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