View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6894_high_4 (Length: 285)
Name: NF6894_high_4
Description: NF6894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6894_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 6 - 271
Target Start/End: Complemental strand, 48764107 - 48763842
Alignment:
| Q |
6 |
agtgataagaagtccagagtgagtaaaatgaaatgtttgaggccgtggtaattcagatggaaaaagaaagaaagcgagaatattattatcttaccaaaac |
105 |
Q |
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| T |
48764107 |
agtgataaggagtccagagtgagtagaatgaaatgtttgaggccgtggtaattcagagggaaaaagaaagaaagcgagaatattattatcttaccaaaac |
48764008 |
T |
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| Q |
106 |
cttctgcgtctttgttgatgaacctcatcaaatgatcggtggtagccaagtttaaatcactgaaataatactccacctaaaaaatcccaaccaaaaccct |
205 |
Q |
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| T |
48764007 |
cttctgggtctttgttgatgaacctcatcaaatgatcggtggtagccaagtttaaatcgctgaaataatactccacctaaaaaatcccaaccaaaaccct |
48763908 |
T |
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| Q |
206 |
agtcaagttgtagagatgcaatttagagagatatgatcaacacgaatagatacataacaatataat |
271 |
Q |
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| T |
48763907 |
agtcaagttgtagagatgcaatttagagagatatgatcaacacgaatagatacataacaatataat |
48763842 |
T |
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