View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6895_low_10 (Length: 221)

Name: NF6895_low_10
Description: NF6895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6895_low_10
NF6895_low_10
[»] scaffold0079 (3 HSPs)
scaffold0079 (15-205)||(5216-5406)
scaffold0079 (31-118)||(5377-5464)
scaffold0079 (15-94)||(5364-5443)
[»] chr7 (26 HSPs)
chr7 (15-205)||(21676050-21676240)
chr7 (31-205)||(28719355-28719529)
chr7 (31-158)||(45148443-45148570)
chr7 (31-205)||(4483628-4483802)
chr7 (15-202)||(16382432-16382619)
chr7 (15-205)||(39292876-39293065)
chr7 (55-197)||(8564726-8564868)
chr7 (31-159)||(46472865-46472992)
chr7 (15-202)||(44306318-44306506)
chr7 (15-164)||(16369574-16369723)
chr7 (31-115)||(16369660-16369744)
chr7 (101-171)||(21539365-21539435)
chr7 (31-114)||(16382411-16382494)
chr7 (31-114)||(44306444-44306527)
chr7 (15-77)||(28719376-28719438)
chr7 (97-202)||(13617699-13617804)
chr7 (31-114)||(39293003-39293086)
chr7 (32-94)||(21676235-21676297)
chr7 (15-114)||(21676178-21676277)
chr7 (33-114)||(28719320-28719401)
chr7 (31-77)||(8564809-8564855)
chr7 (15-77)||(45148464-45148526)
chr7 (32-90)||(9641790-9641850)
chr7 (129-193)||(15979209-15979273)
chr7 (67-115)||(16369697-16369745)
chr7 (101-134)||(15979303-15979336)
[»] chr5 (17 HSPs)
chr5 (17-205)||(14342859-14343046)
chr5 (31-205)||(20455189-20455363)
chr5 (31-203)||(21108409-21108581)
chr5 (31-205)||(11964850-11965024)
chr5 (97-205)||(20833202-20833309)
chr5 (15-77)||(20455280-20455342)
chr5 (119-205)||(24226678-24226764)
chr5 (97-202)||(23414099-23414204)
chr5 (116-197)||(33627605-33627686)
chr5 (15-79)||(21108430-21108494)
chr5 (26-87)||(11764773-11764833)
chr5 (16-77)||(11964872-11964933)
chr5 (59-94)||(11764802-11764837)
chr5 (15-77)||(14342950-14343012)
chr5 (33-114)||(20455317-20455397)
chr5 (52-86)||(14343051-14343085)
chr5 (33-114)||(11964816-11964896)
[»] chr8 (33 HSPs)
chr8 (15-205)||(25756873-25757063)
chr8 (35-205)||(25294873-25295043)
chr8 (31-176)||(11543414-11543559)
chr8 (31-205)||(45560310-45560484)
chr8 (31-176)||(22312569-22312714)
chr8 (15-196)||(25608941-25609111)
chr8 (32-193)||(3845250-3845409)
chr8 (15-202)||(20177079-20177267)
chr8 (15-202)||(20221806-20221994)
chr8 (15-94)||(19332802-19332881)
chr8 (15-114)||(19332819-19332918)
chr8 (31-94)||(19332876-19332939)
chr8 (31-114)||(20177205-20177288)
chr8 (31-114)||(20221932-20222015)
chr8 (31-94)||(24238445-24238508)
chr8 (31-94)||(25608920-25608983)
chr8 (32-114)||(16000904-16000986)
chr8 (31-84)||(16000940-16000993)
chr8 (35-114)||(25756856-25756935)
chr8 (15-77)||(11543435-11543497)
chr8 (15-73)||(24238466-24238524)
chr8 (15-77)||(25294890-25294952)
chr8 (105-205)||(7469137-7469238)
chr8 (15-77)||(22312590-22312652)
chr8 (15-77)||(45560401-45560463)
chr8 (33-114)||(11543379-11543460)
chr8 (121-158)||(19332756-19332793)
chr8 (15-72)||(19332787-19332844)
chr8 (31-114)||(22312532-22312615)
chr8 (108-159)||(22498526-22498577)
chr8 (31-81)||(17265756-17265806)
chr8 (99-156)||(18042772-18042830)
chr8 (70-118)||(11543379-11543427)
[»] scaffold0317 (3 HSPs)
scaffold0317 (17-205)||(14943-15131)
scaffold0317 (31-114)||(15071-15154)
scaffold0317 (15-77)||(15034-15096)
[»] scaffold1204 (2 HSPs)
scaffold1204 (15-197)||(1323-1505)
scaffold1204 (31-94)||(1463-1526)
[»] chr3 (23 HSPs)
chr3 (31-205)||(11401475-11401649)
chr3 (15-197)||(17759543-17759729)
chr3 (15-197)||(19060863-19061049)
chr3 (52-205)||(8603542-8603695)
chr3 (34-205)||(5229206-5229376)
chr3 (31-205)||(38376904-38377078)
chr3 (105-198)||(25105174-25105267)
chr3 (34-94)||(17759687-17759747)
chr3 (34-94)||(19061007-19061067)
chr3 (15-89)||(38376983-38377057)
chr3 (26-87)||(11516772-11516833)
chr3 (26-89)||(17392274-17392337)
chr3 (31-77)||(5229297-5229343)
chr3 (15-77)||(11401496-11401558)
chr3 (105-205)||(43428742-43428843)
chr3 (34-150)||(11516746-11516864)
chr3 (31-80)||(14181293-14181342)
chr3 (105-205)||(18968979-18969080)
chr3 (31-84)||(40040403-40040456)
chr3 (32-90)||(17392241-17392301)
chr3 (31-87)||(37917651-37917707)
chr3 (33-110)||(38377036-38377113)
chr3 (32-80)||(31413599-31413647)
[»] chr2 (20 HSPs)
chr2 (15-205)||(22331603-22331792)
chr2 (31-205)||(18534727-18534901)
chr2 (31-205)||(24561963-24562137)
chr2 (15-192)||(6093725-6093894)
chr2 (119-205)||(43641704-43641790)
chr2 (31-202)||(20272259-20272430)
chr2 (33-103)||(6093706-6093776)
chr2 (17-205)||(24840690-24840873)
chr2 (31-119)||(22331582-22331670)
chr2 (31-87)||(29113144-29113200)
chr2 (73-136)||(45618691-45618754)
chr2 (119-205)||(19434670-19434756)
chr2 (15-77)||(24562054-24562116)
chr2 (15-77)||(18534748-18534810)
chr2 (33-114)||(24562091-24562172)
chr2 (136-205)||(45618405-45618474)
chr2 (15-69)||(24840725-24840779)
chr2 (36-77)||(45618713-45618754)
chr2 (68-148)||(29113144-29113224)
chr2 (102-134)||(45619298-45619330)
[»] scaffold0090 (7 HSPs)
scaffold0090 (34-205)||(5736-5907)
scaffold0090 (50-205)||(1356-1511)
scaffold0090 (15-77)||(1447-1509)
scaffold0090 (15-77)||(5827-5889)
scaffold0090 (42-113)||(35993-36063)
scaffold0090 (31-87)||(35982-36038)
scaffold0090 (35-94)||(36048-36102)
[»] chr6 (29 HSPs)
chr6 (15-154)||(11374005-11374144)
chr6 (31-158)||(29161586-29161713)
chr6 (31-205)||(23220601-23220774)
chr6 (31-172)||(16135183-16135324)
chr6 (52-141)||(25650019-25650108)
chr6 (71-205)||(17084450-17084584)
chr6 (31-119)||(22594749-22594837)
chr6 (17-114)||(29161667-29161764)
chr6 (31-93)||(21930797-21930859)
chr6 (15-81)||(22594750-22594816)
chr6 (31-94)||(29161761-29161824)
chr6 (31-114)||(11374082-11374165)
chr6 (15-94)||(29161724-29161803)
chr6 (15-77)||(16135204-16135266)
chr6 (15-77)||(23220622-23220684)
chr6 (35-92)||(4172874-4172931)
chr6 (35-92)||(4228483-4228540)
chr6 (33-114)||(23220566-23220647)
chr6 (15-77)||(29161630-29161692)
chr6 (33-114)||(21930762-21930843)
chr6 (31-66)||(18104732-18104767)
chr6 (146-205)||(31162105-31162164)
chr6 (72-118)||(4172885-4172931)
chr6 (72-118)||(4228494-4228540)
chr6 (15-77)||(25650019-25650081)
chr6 (15-56)||(21930818-21930859)
chr6 (105-205)||(22463317-22463418)
chr6 (32-90)||(22594642-22594702)
chr6 (68-116)||(26505689-26505737)
[»] scaffold0183 (2 HSPs)
scaffold0183 (15-196)||(9695-9877)
scaffold0183 (31-111)||(9674-9754)
[»] chr4 (21 HSPs)
chr4 (31-205)||(5371791-5371964)
chr4 (17-205)||(12134844-12135029)
chr4 (31-205)||(19558232-19558406)
chr4 (31-205)||(54364664-54364838)
chr4 (31-197)||(17376660-17376823)
chr4 (31-172)||(14570156-14570297)
chr4 (15-89)||(54364743-54364817)
chr4 (15-87)||(14570177-14570249)
chr4 (15-77)||(5371881-5371943)
chr4 (121-205)||(12733052-12733136)
chr4 (31-84)||(12134999-12135052)
chr4 (97-202)||(49070703-49070808)
chr4 (70-191)||(19082289-19082410)
chr4 (105-205)||(38763665-38763766)
chr4 (33-114)||(5371918-5371998)
chr4 (32-90)||(13595395-13595455)
chr4 (33-114)||(14570122-14570202)
chr4 (33-89)||(19082354-19082410)
chr4 (146-205)||(17213063-17213122)
chr4 (121-205)||(16226366-16226449)
chr4 (97-205)||(24237765-24237873)
[»] chr1 (10 HSPs)
chr1 (31-201)||(33396200-33396371)
chr1 (31-156)||(77184-77309)
chr1 (15-205)||(20821876-20822062)
chr1 (31-114)||(20821855-20821938)
chr1 (15-77)||(77226-77288)
chr1 (33-114)||(20821820-20821901)
chr1 (105-205)||(46144659-46144760)
chr1 (70-176)||(21224122-21224229)
chr1 (105-205)||(40437479-40437579)
chr1 (128-203)||(49998526-49998602)
[»] scaffold0231 (3 HSPs)
scaffold0231 (16-189)||(14075-14248)
scaffold0231 (15-89)||(14138-14212)
scaffold0231 (31-94)||(14207-14270)
[»] scaffold0174 (2 HSPs)
scaffold0174 (15-176)||(21208-21369)
scaffold0174 (16-114)||(21307-21405)
[»] scaffold0017 (2 HSPs)
scaffold0017 (38-205)||(11488-11656)
scaffold0017 (31-77)||(11518-11564)
[»] scaffold0009 (6 HSPs)
scaffold0009 (17-94)||(255643-255720)
scaffold0009 (15-112)||(255551-255648)
scaffold0009 (15-94)||(255606-255685)
scaffold0009 (32-94)||(98348-98412)
scaffold0009 (54-114)||(255660-255720)
scaffold0009 (31-81)||(98324-98374)
[»] scaffold0005 (3 HSPs)
scaffold0005 (31-172)||(247079-247220)
scaffold0005 (15-87)||(247127-247199)
scaffold0005 (33-114)||(247174-247254)
[»] scaffold0468 (1 HSPs)
scaffold0468 (106-176)||(12214-12284)
[»] scaffold0057 (1 HSPs)
scaffold0057 (115-205)||(4839-4929)
[»] scaffold0013 (3 HSPs)
scaffold0013 (31-113)||(8429-8511)
scaffold0013 (20-76)||(8429-8485)
scaffold0013 (115-205)||(8322-8412)
[»] scaffold0047 (1 HSPs)
scaffold0047 (31-84)||(75912-75965)
[»] scaffold0601 (1 HSPs)
scaffold0601 (122-205)||(2197-2280)
[»] scaffold0088 (1 HSPs)
scaffold0088 (97-202)||(44793-44900)
[»] scaffold0049 (1 HSPs)
scaffold0049 (129-205)||(34645-34720)
[»] scaffold0153 (1 HSPs)
scaffold0153 (110-205)||(755-850)


Alignment Details
Target: scaffold0079 (Bit Score: 159; Significance: 8e-85; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 5406 - 5216
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
5406 aatatcacaaccaatcaacatatatgcattcaacaacaatatcacaatcaatccacatatatgtattcaccaacaatatcctcatcaattaacatatata 5307  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||    
5306 cattattcaacatcaactatatcatatagttcaacaacttcataccatttctcacaattcaattaatggagaaaatacaacacattatgat 5216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 5464 - 5377
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatt 118  Q
    |||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||   | |||| ||||||||||||||    
5464 aacatatatgcattcaccgacaatatcacaatcaattgacatatatttattcaccaacaatatcacaaccaatcaacatatatgcatt 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 5443 - 5364
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||| ||||  ||||||||  |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
5443 aatatcacaatcaattgacatatatttattcaccaacaatatcacaaccaatcaacatatatgcattcaacaacaatatc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 21676240 - 21676050
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21676240 aatatcacaaccaacaaacatatatgcattcaccaacaatattgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 21676141  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
21676140 cattattcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 21676050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 28719355 - 28719529
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||    
28719355 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 28719454  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    || |||||||||||||||||||||||||| |||| ||| ||||||| |||  || |||||||||||| |||||||    
28719455 ctctatcatatagttcaacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaacacattatgat 28719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 45148443 - 45148570
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
45148443 aacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatgcaatattcaacatcaa 45148542  T
131 ctatatcatatagttcaacaactccata 158  Q
     |||||| ||||||||||||||||||||    
45148543 ttatatcttatagttcaacaactccata 45148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 4483628 - 4483802
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||| |||||| || |||||||||||||||| ||||||||||   |||||| ||||||||||||||| ||||||||||    
4483628 aacatatatgcattcaccgacaatattacaatccattaacatatatgtattcaacaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 4483727  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||  |||||||||||  |||||||    
4483728 ctatatcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaaaatacaacatattatgat 4483802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 16382432 - 16382619
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||  |||| |||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||   ||  || ||||||||||    
16382432 aatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatgtattcaccaacaatatcacaatatatcaacatatatg 16382531  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttat 202  Q
     | |||||||||||||||||||||||||||||||||||||||||   ||| ||| ||| ||| ||| ||| |||||||||||||||||    
16382532 taatattcaacatcaactatatcatatagttcaacaactccatatactttctcataatccaagtaaaggagaaaatacaacaccttat 16382619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 39293065 - 39292876
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||  ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||| |||    
39293065 aatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatgtatttaccaacaatatcaccatcaattagcatacatg 39292966  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||| |||| ||||||| ||  ||| ||| | |||||||||| |||||||    
39292965 cattaatcaacat-aactagatcatatggttcaacaactccatacaatttctcacaatacacgtaaaggagagaatacaacacattatgat 39292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 8564868 - 8564726
Alignment:
55 atcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactc 154  Q
    ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
8564868 atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactc 8564769  T
155 cataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    ||||| |||| ||||||||||| ||| ||| || |||||||||    
8564768 catacgatttctcacaattcaagtaaaggagaacatacaacac 8564726  T

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Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 46472865 - 46472992
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||||||||  | |||||||||  |||||||||| |||||||||||| ||||||| ||    
46472865 aacatatatctattcaccaataatatcataatcaatcaacatatatgtattttc-aacaatatcaccatcaattaaaatatatgcattaatcaacataaa 46472963  T
131 ctatatcatatagttcaacaactccatac 159  Q
    |||||||||||||||||||||||||||||    
46472964 ctatatcatatagttcaacaactccatac 46472992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 44306506 - 44306318
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||||    || ||| ||||||||||    
44306506 aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg 44306407  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat 202  Q
     |||   ||||||| |||  |||||||| |||||||||  ||||  |||| |||||| ||||| ||| ||| |||||||||||||||||    
44306406 tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat 44306318  T

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Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 16369723 - 16369574
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| | |||| ||||||||||| ||||||||||||||||| |||||| ||||||||||  ||||||||||||||   |||||||||| |||||||    
16369723 aatatcaccatcaattaacatatatgcgttcaccaacaatatcaccatcaattaacatatatgccttcaccaacaatataaccatcaattaatatatatg 16369624  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccattt 164  Q
    | ||   ||||||||||||  ||||||| |||||||||| | ||||||||    
16369623 cgttcaccaacatcaactaagtcatataattcaacaacttcctaccattt 16369574  T

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Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 16369744 - 16369660
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgc 115  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||  |||||||||||||||  |||||||||||||||||||    
16369744 aacatatatgcattcaccgacaatatcaccatcaattaacatatatgcgttcaccaacaatatcaccatcaattaacatatatgc 16369660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 21539435 - 21539365
Alignment:
101 aattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa 171  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
21539435 aattaacatgtatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaa 21539365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 16382411 - 16382494
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||   |||||| ||||||||||    
16382411 aacatatatgcattcaccgacaatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatg 16382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 44306527 - 44306444
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||||||    
44306527 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 44306444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 28719376 - 28719438
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
28719376 aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 28719438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 13617699 - 13617804
Alignment:
97 catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
    |||||||| | |||||| ||||| |||||||||||||||| |||||| |||||||||||||||  ||| ||||| | ||| ||| ||| |||||||||||    
13617699 catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 13617798  T
197 ccttat 202  Q
    ||||||    
13617799 ccttat 13617804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 39293086 - 39293003
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||   |||||| ||||||||||    
39293086 aacatatatgtattcaccaataatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatg 39293003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 21676297 - 21676235
Alignment:
32 acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||    
21676297 acatatatgcattcaccgacaatatcacaatcaattgacatatatgtatccaccaacaatatc 21676235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 21676277 - 21676178
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||  ||||||||| || ||||||||||||||||| |||  |||||||||| |||||||||||||||    |||||| ||||||||||    
21676277 aatatcacaatcaattgacatatatgtatccaccaacaatatcacaaccaacaaacatatatgcattcaccaacaatattgcaatcaatcaacatatatg 21676178  T

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Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 28719320 - 28719401
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
28719320 catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 28719401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 8564855 - 8564809
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
8564855 aacatatatgcattcaccgacaatatcacaatcaattaacatatatg 8564809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 45148464 - 45148526
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    ||||||||||||||| |||||||||| |||||||| |||||||   |||||| ||||||||||    
45148464 aatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatg 45148526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 9641790 - 9641850
Alignment:
32 acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa 90  Q
    ||||||||||| |||||||||||  | |||||||| ||||||||||| |||||||||||||    
9641790 acatatatgcactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaa 9641850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 15979273 - 15979209
Alignment:
129 aactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaataca 193  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||| ||| ||| | | ||||||||    
15979273 aactatatcatatagttcaacaacttcatacaatttctcacaatccaagtaaagtagaaaataca 15979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 16369745 - 16369697
Alignment:
67 caacatatatgtattcaccaacaatatcctcatcaattaacatatatgc 115  Q
    ||||||||||| ||||||| ||||||||  |||||||||||||||||||    
16369745 caacatatatgcattcaccgacaatatcaccatcaattaacatatatgc 16369697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 15979336 - 15979303
Alignment:
101 aattaacatatatgcattattcaacatcaactat 134  Q
    ||||||||||||||||||| ||||||||||||||    
15979336 aattaacatatatgcattactcaacatcaactat 15979303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 14343046 - 14342859
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 116  Q
    ||||||||| ||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
14343046 tatcacaac-aatcaacgtatacgcgttcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 14342948  T
117 ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
14342947 ttattcaacatcaactatatcatattgttcaacaactccataccatttctcacaattcaattaatggagaaaatacaacacattatgat 14342859  T

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Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 20455363 - 20455189
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||    
20455363 aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 20455264  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||| |  ||| ||||||||||| ||| ||| |||||||||||| |||||||    
20455263 ctatatcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaaaatacaacacattatgat 20455189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 21108409 - 21108581
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||   |||||| |||||||||| | |||||||||||||    
21108409 aacatatatgtattcaccgacaatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtaatattcaacatcaa 21108508  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatg 203  Q
    ||||||||||||||||||||||||||||   ||| ||||||| ||| ||| ||| ||||||||||||||||||    
21108509 ctatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacaccttatg 21108581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 11964850 - 11965024
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||    ||||| ||||||||||||||| ||||||||||    
11964850 aacatatatgcattcaccgacgatatcacaatcaattaacatatatgtattcaccgacaatatcacactcaatcaacatatatgcattaatcaacatcaa 11964949  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||| || ||||||||||||| ||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
11964950 ctatattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 11965024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 20833309 - 20833202
Alignment:
97 catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| ||| |||  || |||||||| ||    
20833309 catcacttaacatatatgcattattcaacatcaactatatcatatagttcaacaactccatattatttctcacaatacaagtaa-agagaaaatacatca 20833211  T
197 ccttatgat 205  Q
     ||||||||    
20833210 tcttatgat 20833202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 20455342 - 20455280
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
20455342 aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 20455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 24226764 - 24226678
Alignment:
119 attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||| ||| || ||||| |||||||    
24226764 attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaagtaaaacacattatgat 24226678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 23414099 - 23414204
Alignment:
97 catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
    |||||||| | |||||| ||||| |||||||||||||||| |||||| |||||||||||||||  ||| ||||| | ||| ||| ||| |||||||||||    
23414099 catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 23414198  T
197 ccttat 202  Q
    ||||||    
23414199 ccttat 23414204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 33627686 - 33627605
Alignment:
116 attattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||| ||| ||||||||||||    
33627686 attaatcaacttcaactatatcatatagttcaacaactccatacaatttttcataatacaagtaaaggagaaaatacaacac 33627605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 21108430 - 21108494
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgta 79  Q
    |||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
21108430 aatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgta 21108494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 11764833 - 11764773
Alignment:
26 caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||| |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
11764833 caatcaacatatatgtattcaccaacaatatcacaatc-atcaatatatatgtattcaccaa 11764773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 11964872 - 11964933
Alignment:
16 atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    ||||||||| |||| |||||||||| ||||||| ||||||||||| ||||||||||||||||    
11964872 atatcacaatcaattaacatatatgtattcaccgacaatatcacactcaatcaacatatatg 11964933  T

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Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 11764837 - 11764802
Alignment:
59 caatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||||||||||||||||||||||||||||||    
11764837 caatcaatcaacatatatgtattcaccaacaatatc 11764802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 14343012 - 14342950
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||||   |||||| ||||||||||    
14343012 aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 14342950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 20455397 - 20455317
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| | |||||||||  ||||| |||| | |||||||||| ||||||||||||||||   |||||||||||||||||    
20455397 catatatgaaatcaccaacac-atcaccatcacttaacatatatgcattcaccaacaatatcacaatcaattaacatatatg 20455317  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 14343085 - 14343051
Alignment:
52 aatatcacaatcaatcaacatatatgtattcacca 86  Q
    ||||||||||||||| |||||||||||||||||||    
14343085 aatatcacaatcaattaacatatatgtattcacca 14343051  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 11964816 - 11964896
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||||||||  ||||| |||| | |||||||||| ||||||| || |||||   |||||||||||||||||    
11964816 catatatgcaatcaccaacac-atcaccatcacttaacatatatgcattcaccgacgatatcacaatcaattaacatatatg 11964896  T

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Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 25756873 - 25757063
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
25756873 aatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg 25756972  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| ||| |||||||||||| |||||||    
25756973 cattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgat 25757063  T

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Target: chr8; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 25294873 - 25295043
Alignment:
35 tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactat 134  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
25294873 tatatgaattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactat 25294972  T
135 atcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||| |||| |||||| |||| ||| ||| |||||||||||| |||||||    
25294973 atcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgat 25295043  T

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Target: chr8; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 11543414 - 11543559
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    |||||  ||||||||||||||| ||||||||||    
11543414 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatgcattaatcaacatcaa 11543513  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaa 176  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
11543514 ctatatcatatagttcaacaactccatactatttctcacaattcaa 11543559  T

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Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 45560484 - 45560310
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||| ||||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||   |||||  ||||||||||||||| ||||||||||    
45560484 aacaaatatgcattcaccgacaatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatgcattaatcaacatcaa 45560385  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||| | || ||||||| ||| ||| ||| |||||||||||| |||||||    
45560384 ctatatcatatagttcaacaactccatacaacttctcacaatccaagtaaaggagaaaatacaacactttatgat 45560310  T

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Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 22312569 - 22312714
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||   |||||  ||||||||||||||| ||||||||||    
22312569 aacatatatgcattcaccgacaatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatgcattaatcaacatcaa 22312668  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaa 176  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
22312669 ctatatcatatagttcaacaactccatactatttctcacaattcaa 22312714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 25608941 - 25609111
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||           |||| ||||||||||    
25608941 aatatcacaaccaatcaacacatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaac-----------caatcaacatatatg 25609029  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
     |||| || |||||||||||||||||||||||||||||  ||||| |||| ||||||| ||| ||| ||| |||||||||||    
25609030 tattaatccacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 25609111  T

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Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 3845409 - 3845250
Alignment:
32 acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaac 131  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||| |||||||  |||||||  ||||| |||||||||||||| || |||  ||||||    
3845409 acatatatgcattcaccaacaatatcaacatcaattgacatatatgcattcacc--caatatcaccatcacttaacatatatgcactaatcattatcaac 3845312  T
132 tatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaataca 193  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||| ||||||||    
3845311 tatatcatatagttcaacaactccatacaatttctcacaatccaagtaaaggagaaaataca 3845250  T

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Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 20177267 - 20177079
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||||    || ||| ||||||||||    
20177267 aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg 20177168  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat 202  Q
     |||   ||||||| |||  |||||||| |||||||||  ||||  |||| |||||| ||||| ||| ||| |||||||||||||||||    
20177167 tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat 20177079  T

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Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 20221994 - 20221806
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||||    || ||| ||||||||||    
20221994 aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg 20221895  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat 202  Q
     |||   ||||||| |||  |||||||| |||||||||  ||||  |||| |||||| ||||| ||| ||| |||||||||||||||||    
20221894 tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat 20221806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 19332881 - 19332802
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
19332881 aatatcacaaccaatcaacatatatgtatttaccaacaatatctcaatcaatcaacatatatgtattcaccaacaatatc 19332802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 19332918 - 19332819
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||   |||||| ||||||||||    
19332918 aatatcacaatcaattaacatatatgtattcacccacaatatcacaaccaatcaacatatatgtatttaccaacaatatctcaatcaatcaacatatatg 19332819  T

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Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 19332939 - 19332876
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
19332939 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcacccacaatatc 19332876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 20177288 - 20177205
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||||||    
20177288 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20177205  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 20222015 - 20221932
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||||||    
20222015 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20221932  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 24238445 - 24238508
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
24238445 aacatatatgcattcaccgacaatatcacaatcaattaacttatatgtattcaccaacaatatc 24238508  T

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Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 25608920 - 25608983
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
25608920 aacatatatgcattcaccgacaatatcacaaccaatcaacacatatgtattcaccaacaatatc 25608983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 16000904 - 16000986
Alignment:
32 acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||   |||||| ||||||||||    
16000904 acatatatgcaatcaccaacaacatctcaatcactcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 16000986  T

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Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 16000940 - 16000993
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac 84  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
16000940 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcac 16000993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 25756856 - 25756935
Alignment:
35 tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||   |||||| ||||||||||    
25756856 tatatgcattcaccggcaatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatg 25756935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11543435 - 11543497
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||| |||||||| |||||||||||    
11543435 aatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatg 11543497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24238466 - 24238524
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacata 73  Q
    |||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||    
24238466 aatatcacaatcaattaacttatatgtattcaccaacaatatcacaatcaatcaacata 24238524  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25294890 - 25294952
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| |||||||||||||||||| |||||| ||||||||||    
25294890 aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg 25294952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 7469137 - 7469238
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| ||| | ||||||||||||||||||||||||||||||||| | || ||| ||| ||| ||| |||  ||||||||||||||||||    
7469137 aacatgtattcattaatcagcttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatg 7469236  T
204 at 205  Q
    ||    
7469237 at 7469238  T

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Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 22312590 - 22312652
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    ||||| |||| ||||  ||||||||| |||||||||||||||||||||||| |||||||||||    
22312590 aatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatg 22312652  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 45560463 - 45560401
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| || ||||||| |||||| ||||||||||||||||| |||||||||||    
45560463 aatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatg 45560401  T

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Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 11543379 - 11543460
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| | |||||||||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
11543379 catatatgtaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 11543460  T

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Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 19332793 - 19332756
Alignment:
121 tcaacatcaactatatcatatagttcaacaactccata 158  Q
    ||||||||||||||||||||||||||||||||||||||    
19332793 tcaacatcaactatatcatatagttcaacaactccata 19332756  T

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Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19332844 - 19332787
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacat 72  Q
    |||||| ||| |||| |||||||||| |||||||||||||||||||| ||||||||||    
19332844 aatatctcaatcaatcaacatatatgtattcaccaacaatatcacaaccaatcaacat 19332787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 22312532 - 22312615
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| |||||||    ||||||| |||||||||    
22312532 aacatatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatattacaatcaattgacatatatg 22312615  T

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Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 22498577 - 22498526
Alignment:
108 atatatgcattattcaacatcaactatatcatatagttcaacaactccatac 159  Q
    |||||| ||||| |||||||||||||||| |||||||||||| |||||||||    
22498577 atatatacattaatcaacatcaactatataatatagttcaaccactccatac 22498526  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 17265756 - 17265806
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt 81  Q
    |||||||||||||||||| | ||||||||| ||||| ||||||||| ||||    
17265756 aacatatatgcattcaccgaaaatatcacactcaattaacatatatatatt 17265806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 18042830 - 18042772
Alignment:
99 tcaattaacatatatgcatta-ttcaacatcaactatatcatatagttcaacaactcca 156  Q
    |||||| | |||||| ||||| ||||||||||||||||| |||||||||||| ||||||    
18042830 tcaattgatatatatacattaattcaacatcaactatataatatagttcaaccactcca 18042772  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 11543379 - 11543427
Alignment:
70 catatatgtattcaccaacaatatcctcatcaattaacatatatgcatt 118  Q
    |||||||||| |||||||||| |||  ||||| ||||||||||||||||    
11543379 catatatgtaatcaccaacaaaatcaccatcacttaacatatatgcatt 11543427  T

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Target: scaffold0317 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 15131 - 14943
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 116  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
15131 tatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgca 15032  T
117 ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||| || |||||||||||||||||||||||||||||||||||  |||| ||||||||||| ||| ||| |||||||||||| |||||||    
15031 ttaatcgacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgat 14943  T

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Target: scaffold0317; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 15154 - 15071
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||  |||||||| | | ||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||    
15154 aacatatacacattcaccgaaattatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 15071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 15096 - 15034
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| |||||||||||||||||| |||||| ||||||||||    
15096 aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg 15034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 1505 - 1323
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
1505 aatatcacaatcaattaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaatattctcatcaattaacatatatg 1406  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    || |||||||||||||||||||||||||||||||||||||||||   ||| ||||||| ||| ||| ||| ||||||||||||    
1405 caatattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacac 1323  T

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Target: scaffold1204; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 1526 - 1463
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
1526 aacatatacgcattcaccgataatatcacaatcaattaacatatatgtattcaccaacaatatc 1463  T

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Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 11401475 - 11401649
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
11401475 aacatatatgcattcaccgacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaa 11401574  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    || |||||||||||||||||||| ||||| |||| ||||||||||| ||| ||| |||| ||| ||| |||||||    
11401575 ctttatcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaacacagcacattatgat 11401649  T

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Target: chr3; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 17759729 - 17759543
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
17759729 aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatg 17759630  T
115 cattattcaa----catcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    || |||||||    |||||||||||||||||| || ||||||||||||   ||| ||||||| |||||||  || ||||||||||||    
17759629 caatattcaacatgcatcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac 17759543  T

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Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 19061049 - 19060863
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
19061049 aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatg 19060950  T
115 cattattcaa----catcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    || |||||||    |||||||||||||||||| || ||||||||||||   ||| ||||||| |||||||  || ||||||||||||    
19060949 caatattcaacatgcatcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac 19060863  T

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Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 52 - 205
Target Start/End: Original strand, 8603542 - 8603695
Alignment:
52 aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaa 151  Q
    |||||||||||||||  | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
8603542 aatatcacaatcaattgatatatatgtattcaccaacaatatccttatcaattaacacatatgcattattcaacatcaactatatcatatagttcaacaa 8603641  T
152 ctccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |  ||||| |||| ||||||| ||| ||| ||| ||||||||||||||||||||    
8603642 catcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat 8603695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 5229376 - 5229206
Alignment:
34 atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaacta 133  Q
    ||||||||| |||||||||  ||||| |||| | |||||||||| ||||||| ||||||||   |||||| ||||||||||||||| || ||||||||||    
5229376 atatatgcaatcaccaacac-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaatcaacatatatgcattaatcgacatcaacta 5229278  T
134 tatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||| ||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
5229277 tatcatattgttcaacaactccatacgatttctcacaattcaagtaaaggagaaaatacaacacattatgat 5229206  T

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Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 38377078 - 38376904
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||| | |||||| ||||||||   |||   ||||||| |    
38377078 aacatatatgcattcactgacaatatcacaatcaattaacatacatgtattcaccaacaatatcataatcaatcaacatatacatattcaccaacatcga 38376979  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    || ||||||||  |||||||||  ||||  |||| ||| ||| ||| ||| ||| |||||| |||||||||||||    
38376978 ctttatcatatgattcaacaacatcatattatttctcaaaatccaagtaaaggagaaaatataacaccttatgat 38376904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 25105267 - 25105174
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacacc 198  Q
    ||||| ||| ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||  |||||||||| ||| ||| |||||||||||||    
25105267 aacatgtattcattaatcaacttcaactatatcatttagttcaacaactccatacaatttcccacaattcaagtaaaggagaaaatacaacacc 25105174  T

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Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 17759747 - 17759687
Alignment:
34 atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
17759747 atatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatatc 17759687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 19061067 - 19061007
Alignment:
34 atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
19061067 atatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatatc 19061007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 38377057 - 38376983
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca 89  Q
    |||||||||| |||| |||||| ||| ||||||||||||||||| ||||||||||||||||  ||||||||||||    
38377057 aatatcacaatcaattaacatacatgtattcaccaacaatatcataatcaatcaacatatacatattcaccaaca 38376983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 11516833 - 11516772
Alignment:
26 caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||    
11516833 caattaacatatatgtattcaccaacaacatctcaatcaatcaacatatatgtattcaccaa 11516772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17392274 - 17392337
Alignment:
26 caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca 89  Q
    |||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||    
17392274 caattaacatatatgtattcaccaacaacatcacaataaatcaacatatatgtattcactaaca 17392337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 5229343 - 5229297
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
5229343 aacatatatgcattcaccgacaatatcacaatcaatcaacatatatg 5229297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11401496 - 11401558
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| |||||||||||||||||| |||||| ||||||||||    
11401496 aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg 11401558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 43428843 - 43428742
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||| |||| ||| ||| ||| |||| ||  ||||||||| ||||||||    
43428843 aacatgtattcattaatcaacttccactatatcatatagttcaacaactccatacaatttctcataatacaagtaatagaggaaaatacaataccttatg 43428744  T
204 at 205  Q
    ||    
43428743 at 43428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 11516864 - 11516746
Alignment:
34 atatatgcattcaccaacaatat-cacaat-caatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaac 131  Q
    ||||||||| |||||||||| || |||||| |||| ||||||||||||||||||||||| |||   |||||| |||||||||| |||   ||| ||||||    
11516864 atatatgcaatcaccaacaacattcacaattcaattaacatatatgtattcaccaacaacatctcaatcaatcaacatatatgtattcaccaatatcaac 11516765  T
132 tatatcatatagttcaaca 150  Q
    | | ||| |||||||||||    
11516764 tttttcacatagttcaaca 11516746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 14181342 - 14181293
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtat 80  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||    
14181342 aacatatatgcattcaccgacattatcacaatcaattaacatatatgtat 14181293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 18968979 - 18969080
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| || || |||||||||||||||||||||||| |||||| | | || ||| ||| ||| ||| |||  ||||||||||||||||||    
18968979 aacatgtattcattaatccacttcaactatatcatatagttcaacagctccattcaacttctcataatacaagtaaaggaggaaaatacaacaccttatg 18969078  T
204 at 205  Q
    ||    
18969079 at 18969080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 40040456 - 40040403
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac 84  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||||| |||||||    
40040456 aacatatatgcattcaccgacattatcacaatcaattagcatatatttattcac 40040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 17392241 - 17392301
Alignment:
32 acatatatgcattcaccaacaatat-cacaat-caatcaacatatatgtattcaccaacaa 90  Q
    ||||||||||| |||||||||| || |||||| |||| |||||||||||||||||||||||    
17392241 acatatatgcaatcaccaacaacattcacaattcaattaacatatatgtattcaccaacaa 17392301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 37917707 - 37917651
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||||||||||||||||| ||| ||||| ||||||| | ||||||| ||||||||||    
37917707 aacatatatgcattcaccgacattatcagaatcaattagcatatatttattcaccaa 37917651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 38377113 - 38377036
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacata 110  Q
    |||||||||| ||| |||||| ||||| |||| | |||||||||| ||||||  ||||||||   |||||||||||||    
38377113 catatatgcaatcatcaacaaaatcaccatcacttaacatatatgcattcactgacaatatcacaatcaattaacata 38377036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 31413647 - 31413599
Alignment:
32 acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtat 80  Q
    ||||||||||| |||||||||| |||| ||| |||||| ||||||||||    
31413647 acatatatgcactcaccaacaacatcataattaatcaatatatatgtat 31413599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 22331603 - 22331792
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||    
22331603 aatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatgtatt-accaacaatatcaccatcaattaatatatatg 22331701  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||| || ||||||||| |||||||    
22331702 cattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaagatacaacacattatgat 22331792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 18534727 - 18534901
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||   |||||| ||||||||||||||| ||||||||||    
18534727 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatgcattaatcaacatcaa 18534826  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||| ||| ||| |||||||||||| |||||||    
18534827 ctatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgat 18534901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 24562137 - 24561963
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||||| |||||||| |    
24562137 aacatatatgcattcaccgacaatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcga 24562038  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    || ||||||||| |||||||||  ||||| |||| ||||||| ||| ||| ||| ||||||||||||||||||||    
24562037 ctttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat 24561963  T

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Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 6093725 - 6093894
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| | |||||||| ||||||||||||||||   ||||||        ||||||||||||||||||||||||||||||||||||||||    
6093725 aatatcacaatcaatcagcatatatgtattcaccaacaatatcctcatcaat--------atgtattcaccaacaatatcctcatcaattaacatatatg 6093816  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatac 192  Q
    || |||||||||  ||||||||||||||||||||||||||||||   ||| ||||||| ||| ||| ||| |||||||    
6093817 caatattcaacaataactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatac 6093894  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 43641704 - 43641790
Alignment:
119 attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
43641704 attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 43641790  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 20272259 - 20272430
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||| |||||||||| ||||| | || | | |||||||| ||||||| ||||||||   ||||||||||||||||| |||   ||||||| |    
20272259 aacatatatgcaatcaccaacaaaatcaccaacacttagcatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacatcga 20272358  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttat 202  Q
    || ||||||||| ||||| |||  ||||| |||| ||||||| ||| ||| ||| |||||||||||| ||||    
20272359 ctttatcatataattcaataacatcatacaatttctcacaatccaagtaaaggagaaaatacaacacattat 20272430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 6093706 - 6093776
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaat 103  Q
    |||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
6093706 catatatgcattcgtcgacaatatcacaatcaatcagcatatatgtattcaccaacaatatcctcatcaat 6093776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 24840690 - 24840873
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 116  Q
    |||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||| ||| |||||   |||||| |    |||| ||    
24840690 tatcacaatcaattaacatatatgttttcaccaacaatatctcaatcaatcaacatatatgcattcacaaaccatatcacaatcaatca----atataca 24840785  T
117 ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||   ||||||| ||| ||||||||| |||||||||  ||||  |||| ||||||||||| | | ||| |||||||||||| |||||||    
24840786 ttcaccaacatcgactttatcatataattcaacaacatcatattatttctcacaattcaagtga-ggagaaaatacaacacattatgat 24840873  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 22331582 - 22331670
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatta 119  Q
    |||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||||| ||||    
22331582 aacacatatgtattcatcaataatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatgtatta 22331670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 29113144 - 29113200
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
29113144 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaa 29113200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 45618754 - 45618691
Alignment:
73 atatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatat 136  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
45618754 atatgcattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactatat 45618691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 19434756 - 19434670
Alignment:
119 attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||| |||||||||||||| |||||| ||| |||| ||||||||||| ||| ||| ||||||||| || |||||||    
19434756 attcaacatcaactacatcatatagttcaaaaactccttacaatttctcacaattcaagtaaaggagaaaatacaatacattatgat 19434670  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 24562116 - 24562054
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    ||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
24562116 aatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 24562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 18534748 - 18534810
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||||||||||||    
18534748 aatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatg 18534810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 24562172 - 24562091
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
24562172 catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaaaatcaattaacatatatg 24562091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 45618405 - 45618474
Alignment:
136 tcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||||||||||||| ||||| |||| ||||||||||| |||  || |||||||||||| |||||||    
45618405 tcatatagttcaacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaacacattatgat 45618474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 24840725 - 24840779
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaa 69  Q
    |||||| ||| |||| ||||||||||||||||| ||| |||||||||||||||||    
24840725 aatatctcaatcaatcaacatatatgcattcacaaaccatatcacaatcaatcaa 24840779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 45618754 - 45618713
Alignment:
36 atatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
45618754 atatgcattcaccaacaatatcaccatcaattaacatatatg 45618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 29113144 - 29113224
Alignment:
68 aacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaa 148  Q
    |||||||||| ||||||| ||||||||   ||||||||||||||||| |||   ||| |||||||  |||||||| |||||    
29113144 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaatatcaacttcatcatataattcaa 29113224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 45619330 - 45619298
Alignment:
102 attaacatatatgcattattcaacatcaactat 134  Q
    |||||||||||||||||| ||||||||||||||    
45619330 attaacatatatgcattactcaacatcaactat 45619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 112; Significance: 9e-57; HSPs: 7)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 5907 - 5736
Alignment:
34 atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaacta 133  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||   |||||| ||||||||||||||| ||||| |||||||    
5907 atatatgcattcaccgacaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaacta 5808  T
134 tatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
5807 tatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 1511 - 1356
Alignment:
50 acaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaac 149  Q
    ||||||||||||||||| | |||||||||||||||||||||||||   |||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
1511 acaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactatatcatatagttcaac 1412  T
150 aactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
1411 aactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 1509 - 1447
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| | |||||||| ||||||||||||||||||||||||||||||||||||    
1509 aatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatg 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5889 - 5827
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| | |||||||| ||||||||||||||||||||||||||||||||||||    
5889 aatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatg 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 36063 - 35993
Alignment:
42 attcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatat 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||   |||||| |||||||||    
36063 attcaccaacaatatcacaatca-tcaacatatatgtattcactaacaatatctcaatcaatcaacatatat 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 36038 - 35982
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||| | ||||||||    
36038 aacatatatgtattcactaacaatatctcaatcaatcaacatatatattttcaccaa 35982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 36102 - 36048
Alignment:
35 tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||| ||||||||||||||||||||||||| |||||     |||||||||||||||||    
36102 tatatgtattcaccaacaatatcacaatcaatgaacat-----tattcaccaacaatatc 36048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 9e-57; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 11374144 - 11374005
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| | |||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
11374144 aatatcaccatcaattaacatatacatattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 11374045  T
115 cattattcaacatcaactatatcatatagttcaacaactc 154  Q
    || |||||||||||||||||||||||||||||||||||||    
11374044 caatattcaacatcaactatatcatatagttcaacaactc 11374005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 29161713 - 29161586
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
29161713 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatgcaatattcaacatcaa 29161614  T
131 ctatatcatatagttcaacaactccata 158  Q
    |||||||||||||||| |||||||||||    
29161613 ctatatcatatagttcgacaactccata 29161586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 23220601 - 23220774
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||    
23220601 aacatatatgcattcaccgacaatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 23220700  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||| ||||  |||| ||||||||||| ||| ||| |||||  ||||| |||||||    
23220701 ctatatcatatagttcaacaact-catataatttctcacaattcaagtaaaggagaaaatgaaacacattatgat 23220774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 16135183 - 16135324
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    ||||| ||||||||||||||| ||||||||||    
16135183 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacagtcaatcaacatatatgcattaatcaacatcaa 16135282  T
131 ctatatcatatagttcaacaactccataccatttttcacaat 172  Q
    |||||||||||||||||| |||||||||| |||| |||||||    
16135283 ctatatcatatagttcaataactccatacaatttctcacaat 16135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 25650019 - 25650108
Alignment:
52 aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatat 141  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
25650019 aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcactattcaacatcaactacatcatat 25650108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 17084584 - 17084450
Alignment:
71 atatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcaca 170  Q
    |||||| |||||||||| | ||||   |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||    
17084584 atatatatattcaccaatagtatcacaatcaatcaacatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcaca 17084485  T
171 attcaattaatggaaaaaatacaacaccttatgat 205  Q
    || ||| |||  || |||||||||||| |||||||    
17084484 atacaagtaaatgagaaaatacaacacattatgat 17084450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 22594837 - 22594749
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatta 119  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||| ||||    
22594837 aacatatatgtattcaccaataatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatta 22594749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 29161764 - 29161667
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||||||||||| |||||||||  ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||   |||||| ||||||||||    
29161764 tatcacaaccaatcaacatatatatattcaccgacaatatctcaatccatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 29161667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 21930797 - 21930859
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatat 93  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
21930797 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatat 21930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22594816 - 22594750
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt 81  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
22594816 aatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatt 22594750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 29161824 - 29161761
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
29161824 aacatatatgcattcaccgacaatatcccaatcaatcaacatatatgtattcaccaacagtatc 29161761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 11374165 - 11374082
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||  |||||||||||||||||   |||||| ||||||||||    
11374165 aacatatatgcattcaccgacaatatcaccatcaattaacatatacatattcaccaacaatatcacaatcaatcaacatatatg 11374082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 29161803 - 29161724
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||| ||| |||| |||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||    
29161803 aatatcccaatcaatcaacatatatgtattcaccaacagtatcacaaccaatcaacatatatatattcaccgacaatatc 29161724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 16135204 - 16135266
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||    
16135204 aatatcacaatcaattaacatatatgtattcaccaacaatatcacagtcaatcaacatatatg 16135266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 23220622 - 23220684
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    ||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
23220622 aatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 23220684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4172931 - 4172874
Alignment:
35 tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaata 92  Q
    ||||||||||||||||||||||||| |||| | |||||||||| ||||||||||||||    
4172931 tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata 4172874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4228540 - 4228483
Alignment:
35 tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaata 92  Q
    ||||||||||||||||||||||||| |||| | |||||||||| ||||||||||||||    
4228540 tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata 4228483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 23220566 - 23220647
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||| |||||| ||||| |||| | |||||||||| ||||||| |||||||| | |||||||||||||||||    
23220566 catatatgcaatcatcaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcataatcaattaacatatatg 23220647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 29161692 - 29161630
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| |||||||||||||||||  |||||| ||||||||||    
29161692 aatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatg 29161630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 21930762 - 21930843
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||||||||| ||| | |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
21930762 catatatgcaatcaccaacaaaatcgccatcagttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 21930843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 18104767 - 18104732
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaat 66  Q
    |||||||||||||||||| |||||||||||||||||    
18104767 aacatatatgcattcaccgacaatatcacaatcaat 18104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 31162164 - 31162105
Alignment:
146 caacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||| |||||  ||| ||||||||||| ||| ||| ||||||||||||||||||||    
31162164 caacaacttcatacagtttctcacaattcaagtaaaggagaaaatacaacaccttatgat 31162105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 4172931 - 4172885
Alignment:
72 tatatgtattcaccaacaatatcctcatcaattaacatatatgcatt 118  Q
    |||||| ||||||||||||||||  ||||| ||||||||||||||||    
4172931 tatatgcattcaccaacaatatcaccatcatttaacatatatgcatt 4172885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 4228540 - 4228494
Alignment:
72 tatatgtattcaccaacaatatcctcatcaattaacatatatgcatt 118  Q
    |||||| ||||||||||||||||  ||||| ||||||||||||||||    
4228540 tatatgcattcaccaacaatatcaccatcatttaacatatatgcatt 4228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25650019 - 25650081
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||| ||| |||| |||||||||| ||||||||||||||||   |||||| ||||||||||    
25650019 aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 25650081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 21930818 - 21930859
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatat 56  Q
    |||||||||| |||| |||||||||| |||||||||||||||    
21930818 aatatcacaatcaattaacatatatgtattcaccaacaatat 21930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 22463418 - 22463317
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| ||||| ||||||||||| |||||||||| | || |  || |||| ||||||| ||| ||| |||  ||||||||||||||||||    
22463418 aacatgtattcattaatcaacttcaactatatcctatagttcaaaaccttcgcacaatttctcacaatccaagtaaaggaggaaaatacaacaccttatg 22463319  T
204 at 205  Q
    ||    
22463318 at 22463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 22594702 - 22594642
Alignment:
32 acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa 90  Q
    ||||||||||| |||||||||||  | || ||||| ||||||||||| |||||||||||||    
22594702 acatatatgcactcaccaacaattcaccataatcattcaacatatatatattcaccaacaa 22594642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 26505689 - 26505737
Alignment:
68 aacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 116  Q
    ||||||| || ||||||||||||||||  ||| ||||||||||||||||    
26505689 aacatatgtggattcaccaacaatatcaccattaattaacatatatgca 26505737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 9695 - 9877
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    ||||| |||| |||| |||||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| ||||||||    
9695 aatatgacaatcaattaacatatatgtattgaccaacaatatcacaatcaatcaacatatctatattcaccaacaatatcaccatcaattatcatatatg 9794  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttt-tcacaattcaattaatggaaaaaatacaaca 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||  || |||||||||||    
9795 cattaatcaacatcaactatatcatatagttcaacaactccatacaattttctcacaattcaagtaaaagagaaaatacaaca 9877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 9674 - 9754
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatat 111  Q
    |||||||||||| ||||| ||||||| ||||||||| |||||||||||||| ||||||||||||   |||||| |||||||    
9674 aacatatatgcactcaccgacaatatgacaatcaattaacatatatgtattgaccaacaatatcacaatcaatcaacatat 9754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 8e-54; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 5371964 - 5371791
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||    
5371964 aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 5371865  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||| |||||||||||||||  ||| ||||||||||   || ||| |||||||||||| |||||||    
5371864 ctatatcatatag-tcaacaactccatacagtttctcacaattcaggcaaaggagaaaatacaacacattatgat 5371791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 12135029 - 12134844
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca 116  Q
    |||||||| |||| |||||||||| |||||| ||   ||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
12135029 tatcacaatcaattaacatatatgtattcacaaa---tatcataaccaatcaacatatatgtattcaccaataatatcttcatcaattaacatagatgca 12134933  T
117 ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||| ||||||| ||| |||  || |||||||||||| |||||||    
12134932 ttattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaagagaaaatacaacactttatgat 12134844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 19558232 - 19558406
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    ||||||| |||||||| | ||||||| |||||| || |||||||||||||||||||||||||||   |||||| |||| ||||| |||| ||||||||||    
19558232 aacatatctgcattcatcgacaatataacaatccattaacatatatgtattcaccaacaatatcacaatcaatcaacagatatgtattaatcaacatcaa 19558331  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||| |||||||||||| |||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
19558332 ctatatcatatggttcaacaactcgatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 19558406  T

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Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 54364838 - 54364664
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||   || ||| |||||||||| |||   ||||||| |    
54364838 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaacatcga 54364739  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    || ||||||||| |||||||||  ||||| |||| ||||||| ||| ||| ||| ||||||||||||||||||||    
54364738 ctttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat 54364664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 17376823 - 17376660
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||   |||||| |||||||||||||||  |||||||||    
17376823 aacatatatgcattcaccgacaatatcacaatcaatca---tatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaaccaacatcaa 17376727  T
131 ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac 197  Q
    ||| |||||||| || |||||| |||||  |||| ||||||||||| ||| ||| ||||||||||||    
17376726 ctaaatcatataatttaacaaccccatataatttctcacaattcaagtaaaggagaaaatacaacac 17376660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 14570156 - 14570297
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||   |||||| |||||||||| |||   ||| |||||    
14570156 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa 14570255  T
131 ctatatcatatagttcaacaactccataccatttttcacaat 172  Q
    ||  |||||| | |||||||||  ||||| |||| |||||||    
14570256 cttcatcataaaattcaacaacatcatactatttctcacaat 14570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 54364817 - 54364743
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca 89  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
54364817 aatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaaca 54364743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 14570177 - 14570249
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||||||||| |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
14570177 aatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaa 14570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5371943 - 5371881
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
5371943 aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 5371881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 12733052 - 12733136
Alignment:
121 tcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| ||||||||||| ||||||||||||||| |  ||||||| ||||||| ||| ||| ||| ||||||||||||||||||||    
12733052 tcaacttcaactatatcctatagttcaacaacttcgcaccatttctcacaatacaagtaaaggagaaaatacaacaccttatgat 12733136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 12135052 - 12134999
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac 84  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
12135052 aacatatatgcattcaccgacattatcacaatcaattaacatatatgtattcac 12134999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 49070703 - 49070808
Alignment:
97 catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
    |||||||| | ||| || ||||| |||||||||||||||| |||||| ||||||||||||||   ||| ||||||| ||| ||| ||| | |||||||||    
49070703 catcaattgatatacatacattaatcaacatcaactatataatatagctcaacaactccatatactttctcacaatccaagtaaaggagagaatacaaca 49070802  T
197 ccttat 202  Q
    ||||||    
49070803 ccttat 49070808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 19082410 - 19082289
Alignment:
70 catatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcac 169  Q
    |||||||  ||||||||||||||||  |||||||||| |||||| ||||   ||||||| |||| |||||||| ||||| |||| ||| | |||| | ||    
19082410 catatatacattcaccaacaatatcaccatcaattaatatatatacattcaccaacatcgactacatcatataattcaataacttcatgcaatttcttac 19082311  T
170 aattcaattaatggaaaaaata 191  Q
    ||||||| ||| ||| ||||||    
19082310 aattcaagtaaaggagaaaata 19082289  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 38763665 - 38763766
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| || || ||||||||||||||||||||||||||| ||||| | |||||| ||| ||| ||| |||  |||||||||||||| |||    
38763665 aacatgtattcattaatccacttcaactatatcatatagttcaacaacttcatacaacttttcataatacaagtaaaggaggaaaatacaacacctaatg 38763764  T
204 at 205  Q
    ||    
38763765 at 38763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 5371998 - 5371918
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| | |||||||||  ||||| |||| | |||||||||| ||||||||||||||||   |||||||||||||||||    
5371998 catatatgaaatcaccaacac-atcaccatcacttaacatatatgcattcaccaacaatatcacaatcaattaacatatatg 5371918  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 13595455 - 13595395
Alignment:
32 acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa 90  Q
    ||||||||||| |||||||||||  | |||||||| ||||||||||| |||||||||||||    
13595455 acatatatgcactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaa 13595395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 14570122 - 14570202
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||| |||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
14570122 catatatgcactcaccgacaa-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 14570202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 19082410 - 19082354
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca 89  Q
    ||||||| ||||||||||||||||||| |||||| || ||||||  |||||||||||    
19082410 catatatacattcaccaacaatatcaccatcaattaatatatatacattcaccaaca 19082354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 17213122 - 17213063
Alignment:
146 caacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||| ||||| |||| ||||||||||| ||| ||| |||||||||||| |||||||    
17213122 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat 17213063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 16226449 - 16226366
Alignment:
121 tcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||||||  |||||||||| | |||||||||||||| |||  ||||||| ||| |||  || |||||||||||| |||||||    
16226449 tcaacatcaatcatatcatataatccaacaactccatacaattcctcacaatccaagtaa-cgagaaaatacaacacattatgat 16226366  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 24237765 - 24237873
Alignment:
97 catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca 196  Q
    |||||||| | ||| || ||||| ||||||||||||||||  ||||  |||||||||||||||   || | | ||| ||| ||| ||| ||||||||| |    
24237765 catcaattgatatacatacattaatcaacatcaactatatattatatctcaacaactccatacacgttcttataatccaagtaaaggagaaaatacaaaa 24237864  T
197 ccttatgat 205  Q
    |||||||||    
24237865 ccttatgat 24237873  T

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Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 33396200 - 33396371
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||    
33396200 aacatatatgcattcaccgacaatatcacaatcattcaacatatatgtattcaccgacaatatcctaatcaattaacatatatgcaacattcaacatcaa 33396299  T
131 ctatatcatatagttcaacaactccataccatttttcacaatt-caattaatggaaaaaatacaacacctta 201  Q
    ||||||||||||||||||||||  ||||  |||| |||||||| ||| |||  || ||||||||||||||||    
33396300 ctatatcatatagttcaacaacatcatattatttctcacaattccaagtaaatgagaaaatacaacacctta 33396371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 77309 - 77184
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||   |||||| ||||||||||||||| ||| ||||||    
77309 aacatatatgcattcacccacaatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaccatcaa 77210  T
131 ctatatcatatagttcaacaactcca 156  Q
    ||||||||||||||| ||||||||||    
77209 ctatatcatatagtttaacaactcca 77184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 20821876 - 20822062
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||| |||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| |||||   |||||| |||||||||     
20821876 aatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatgtactcaccaaccatatcacaatcaatcaacatatatt 20821975  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||     | ||||||||| ||||||||| |||||||||  || || |||| ||||||| ||| ||| ||| |||||||  ||| |||||||    
20821976 ca----cctacatcaactttatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaatacttcacattatgat 20822062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 20821855 - 20821938
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| | |||||| ||||||||||    
20821855 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatg 20821938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 77288 - 77226
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||||    
77288 aatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatg 77226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 20821820 - 20821901
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
20821820 catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 20821901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 46144659 - 46144760
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    ||||| ||| ||||| || || ||||||||||||||||||||||||||||||||| | || ||| ||| ||| ||| |||  || |||||||||||||||    
46144659 aacatgtattcattaatccacttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaacatacaacaccttatg 46144758  T
204 at 205  Q
    ||    
46144759 at 46144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 21224122 - 21224229
Alignment:
70 catatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatca-tatagttcaacaactccataccatttttca 168  Q
    |||||||| | ||||||||||||||  ||||||||| | |||||| | || |||||| |||||| |||| || |  ||||||||||||||| |||| |||    
21224122 catatatgcactcaccaacaatatcaccatcaattagcttatatgtaataatcaacaacaactacatcattacatctcaacaactccatacaatttctca 21224221  T
169 caattcaa 176  Q
    ||||||||    
21224222 caattcaa 21224229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 40437579 - 40437479
Alignment:
105 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatga 204  Q
    ||||| ||| ||||| ||||| |||| |||||| ||||||||||||||| |  || |||| ||||||| ||| ||| |||  |||||||| |||||||||    
40437579 aacatgtattcattaatcaacttcaattatatcctatagttcaacaacttcgcacaatttctcacaatccaagtaaaggaggaaatacaataccttatga 40437480  T
205 t 205  Q
    |    
40437479 t 40437479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 49998602 - 49998526
Alignment:
128 caactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg 203  Q
    |||||||||||||||||||||||||| ||||| | || ||| ||| ||| ||| |||  ||||||||||||||||||    
49998602 caactatatcatatagttcaacaactacatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatg 49998526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 14248 - 14075
Alignment:
16 atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgc 115  Q
    ||||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||   |||||| ||||||||||     
14248 atatcacaatcaattaacatatatgtattcaccaacaatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgt 14149  T
116 attattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaa 189  Q
    |||   ||||||||||||||||||||| |||||||||  || || |||| ||||||| ||| ||| ||| ||||    
14148 attcaccaacatcaactatatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaa 14075  T

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Target: scaffold0231; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14212 - 14138
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca 89  Q
    |||||||||| | || |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
14212 aatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgtattcaccaaca 14138  T

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Target: scaffold0231; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 14270 - 14207
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||    
14270 aacatatatgcatgcaccgaatatatcacaatcaattaacatatatgtattcaccaacaatatc 14207  T

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Target: scaffold0174 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 21369 - 21208
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||| ||| |||| |||||||||| | ||| |||||||||||||||||||||||||||||||||| || |||||||||   |||||| ||||||||||    
21369 aatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatgtatttactaacaatatcacaatcaatcaacatatatg 21270  T
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaa 176  Q
     |||  |||||||| ||| ||||||||| ||| |||||  ||||| |||| |||||||||||    
21269 tattcatcaacatcgactttatcatataattccacaacatcatactatttctcacaattcaa 21208  T

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Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 21405 - 21307
Alignment:
16 atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||| |||| |||| |||||||||| | |||||||||||||| ||||||||||||||||||||| ||| ||||||||||   |||||| ||||||||||    
21405 atattacaatcaatcaacatatatgtactcaccaacaatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatg 21307  T

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Target: scaffold0017 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 11488 - 11656
Alignment:
38 atgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaaca-tcaactatat 136  Q
    ||||| |||||||||| ||||| |||| | |||||||||| ||||||| ||||||||  ||||| | ||||||||||||||| |||||| ||||||||||    
11488 atgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaccatcagtcaacatatatgcattaatcaacattcaactatat 11587  T
137 catatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
     |||||  ||||||||| |||||  ||| ||||||| ||| ||| ||| |||||| |||||||||||||    
11588 aatataactcaacaacttcatacactttctcacaatccaagtaaaggagaaaataaaacaccttatgat 11656  T

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Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 11518 - 11564
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg 77  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||    
11518 aacatatatgcattcaccgacaatatcaccatcagtcaacatatatg 11564  T

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Target: scaffold0009 (Bit Score: 62; Significance: 6e-27; HSPs: 6)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 255720 - 255643
Alignment:
17 tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
255720 tatcacaaccaattaagatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaaaatatc 255643  T

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Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 255648 - 255551
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatata 112  Q
    |||||||||| ||||  ||||||||  ||| || ||||||||||||||||||| ||||||||||||||||||||||||||   |||||| ||||||||    
255648 aatatcacaatcaatccacatatatttatttactaacaatatcacaatcaatccacatatatgtattcaccaacaatatcaaaatcaatcaacatata 255551  T

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Target: scaffold0009; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 255685 - 255606
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    |||||||||| |||| |||||||||| ||||||||| |||||||||||||||| |||||||| |||| || |||||||||    
255685 aatatcacaatcaatcaacatatatgtattcaccaaaaatatcacaatcaatccacatatatttatttactaacaatatc 255606  T

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Target: scaffold0009; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 98412 - 98348
Alignment:
32 acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaatatc 94  Q
    ||||||||| | |||||||||||  | |||||||| ||||||||||| |||||||||||||||||    
98412 acatatatgaactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaatatc 98348  T

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Target: scaffold0009; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 255720 - 255660
Alignment:
54 tatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||| |||| || ||||||||||||||||||||||||   |||||| ||||||||||    
255720 tatcacaaccaattaagatatatgtattcaccaacaatatcacaatcaatcaacatatatg 255660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 98374 - 98324
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt 81  Q
    |||||||||  ||||||||||||||||| ||| |||||| |||||||||||    
98374 aacatatatatattcaccaacaatatcataattaatcaatatatatgtatt 98324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 247220 - 247079
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 130  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||   |||||| |||||||||| |||   ||| |||||    
247220 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa 247121  T
131 ctatatcatatagttcaacaactccataccatttttcacaat 172  Q
    ||  |||||| | |||||||||  ||||| |||| |||||||    
247120 cttcatcataaaattcaacaacatcatactatttctcacaat 247079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 247199 - 247127
Alignment:
15 aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa 87  Q
    |||||||||| |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
247199 aatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaa 247127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 247254 - 247174
Alignment:
33 catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg 114  Q
    |||||||||| ||||| |||| ||||| |||| | |||||||||| ||||||| ||||||||   |||||||||||||||||    
247254 catatatgcactcaccgacaa-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg 247174  T

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Target: scaffold0468 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 12284 - 12214
Alignment:
106 acatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaa 176  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
12284 acatatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaatttctcacaattcaa 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 4839 - 4929
Alignment:
115 cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| |||| ||||||||||| |||||| ||||||||| |||||  ||| ||||||| ||| ||| ||| ||||||||||||||||||||    
4839 cattaatcaatatcaactatataatatagctcaacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgat 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 8511 - 8429
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatat 113  Q
    |||||||||||||||||| |||||  |||||||||| ||||||||||||| || ||||||||||   |||||| |||||||||    
8511 aacatatatgcattcaccgacaatgccacaatcaattaacatatatgtatccatcaacaatatcacaatcaataaacatatat 8429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8485 - 8429
Alignment:
20 cacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatat 76  Q
    ||||| |||| |||||||||| || || ||||||||||||||||||| |||||||||    
8485 cacaatcaattaacatatatgtatccatcaacaatatcacaatcaataaacatatat 8429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 8412 - 8322
Alignment:
115 cattattcaacat-caactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||| ||||||| ||||||||| |||||| | ||||||| |||||  ||| ||||||| ||| ||| ||| ||||||||||||||||||||    
8412 cattaatcaacattcaactatataatatagct-aacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgat 8322  T

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Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 75912 - 75965
Alignment:
31 aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac 84  Q
    |||||||||||||||||| ||||||||||||||||| | || ||||||||||||    
75912 aacatatatgcattcaccgacaatatcacaatcaattagcacatatgtattcac 75965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 2280 - 2197
Alignment:
122 caacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    ||||||| ||| ||||||||| |||||||||  ||||  |||| ||||||| ||| ||| ||| ||||||||||||||||||||    
2280 caacatcgactttatcatataattcaacaacatcatattatttctcacaatccaagtaaaggagaaaatacaacaccttatgat 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 44900 - 44793
Alignment:
97 catcaattaacatatatgcattattcaacatcaact--atatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaa 194  Q
    |||||||| | |||||| ||||| ||||||||||||  |||| |||||| |||||||||| ||||  ||| ||||| | ||| ||  ||| |||||||||    
44900 catcaattgatatatatacattaatcaacatcaactatatataatatagctcaacaactctatacactttctcacattccaagtagaggagaaaatacaa 44801  T
195 caccttat 202  Q
    ||||||||    
44800 caccttat 44793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 34720 - 34645
Alignment:
129 aactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||| |||||| |||||||||||||||  ||| ||||| | ||| ||| ||| ||||||||||||||||||||    
34720 aactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgat 34645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 755 - 850
Alignment:
110 atatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat 205  Q
    |||||||||| ||||||| ||||||||| ||| ||||||||||  |||    ||| ||||||| ||| ||| ||| |||||||||||| |||||||    
755 atatgcattaatcaacataaactatatcctatcgttcaacaacatcatgtactttctcacaatccaagtaaaggagaaaatacaacacattatgat 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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