View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6895_low_10 (Length: 221)
Name: NF6895_low_10
Description: NF6895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6895_low_10 |
 |  |
|
| [»] scaffold0079 (3 HSPs) |
 |  |  |
|
| [»] scaffold0317 (3 HSPs) |
 |  |  |
|
| [»] scaffold1204 (2 HSPs) |
 |  |  |
|
| [»] scaffold0090 (7 HSPs) |
 |  |  |
|
| [»] scaffold0183 (2 HSPs) |
 |  |  |
|
| [»] scaffold0231 (3 HSPs) |
 |  |  |
|
| [»] scaffold0174 (2 HSPs) |
 |  |  |
|
| [»] scaffold0017 (2 HSPs) |
 |  |  |
|
| [»] scaffold0009 (6 HSPs) |
 |  |  |
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| [»] scaffold0005 (3 HSPs) |
 |  |  |
|
| [»] scaffold0468 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
| [»] scaffold0013 (3 HSPs) |
 |  |  |
|
| [»] scaffold0047 (1 HSPs) |
 |  |  |
|
| [»] scaffold0601 (1 HSPs) |
 |  |  |
|
| [»] scaffold0088 (1 HSPs) |
 |  |  |
|
| [»] scaffold0049 (1 HSPs) |
 |  |  |
|
| [»] scaffold0153 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0079 (Bit Score: 159; Significance: 8e-85; HSPs: 3)
Name: scaffold0079
Description:
Target: scaffold0079; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 5406 - 5216
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5406 |
aatatcacaaccaatcaacatatatgcattcaacaacaatatcacaatcaatccacatatatgtattcaccaacaatatcctcatcaattaacatatata |
5307 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
5306 |
cattattcaacatcaactatatcatatagttcaacaacttcataccatttctcacaattcaattaatggagaaaatacaacacattatgat |
5216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 5464 - 5377
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatt |
118 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| | |||| |||||||||||||| |
|
|
| T |
5464 |
aacatatatgcattcaccgacaatatcacaatcaattgacatatatttattcaccaacaatatcacaaccaatcaacatatatgcatt |
5377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 5443 - 5364
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||| |
|
|
| T |
5443 |
aatatcacaatcaattgacatatatttattcaccaacaatatcacaaccaatcaacatatatgcattcaacaacaatatc |
5364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 21676240 - 21676050
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21676240 |
aatatcacaaccaacaaacatatatgcattcaccaacaatattgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
21676141 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
21676140 |
cattattcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
21676050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 28719355 - 28719529
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
28719355 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
28719454 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||| ||| ||||||| ||| || |||||||||||| ||||||| |
|
|
| T |
28719455 |
ctctatcatatagttcaacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaacacattatgat |
28719529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 45148443 - 45148570
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
45148443 |
aacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatgcaatattcaacatcaa |
45148542 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccata |
158 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
45148543 |
ttatatcttatagttcaacaactccata |
45148570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 4483628 - 4483802
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||| || |||||||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
4483628 |
aacatatatgcattcaccgacaatattacaatccattaacatatatgtattcaacaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
4483727 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||| ||| || ||||||||||| ||||||| |
|
|
| T |
4483728 |
ctatatcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaaaatacaacatattatgat |
4483802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 16382432 - 16382619
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||||||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
16382432 |
aatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatgtattcaccaacaatatcacaatatatcaacatatatg |
16382531 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttat |
202 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| ||| ||| ||||||||||||||||| |
|
|
| T |
16382532 |
taatattcaacatcaactatatcatatagttcaacaactccatatactttctcataatccaagtaaaggagaaaatacaacaccttat |
16382619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 39293065 - 39292876
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||| |
|
|
| T |
39293065 |
aatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatgtatttaccaacaatatcaccatcaattagcatacatg |
39292966 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||| ||||| ||||||| ||||||||||||||||| |||| ||||||| || ||| ||| | |||||||||| ||||||| |
|
|
| T |
39292965 |
cattaatcaacat-aactagatcatatggttcaacaactccatacaatttctcacaatacacgtaaaggagagaatacaacacattatgat |
39292876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 8564868 - 8564726
Alignment:
| Q |
55 |
atcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactc |
154 |
Q |
| |
|
||||| |||| | |||||||||| ||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8564868 |
atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactc |
8564769 |
T |
 |
| Q |
155 |
cataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
||||| |||| ||||||||||| ||| ||| || ||||||||| |
|
|
| T |
8564768 |
catacgatttctcacaattcaagtaaaggagaacatacaacac |
8564726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 46472865 - 46472992
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||| ||||||| || |
|
|
| T |
46472865 |
aacatatatctattcaccaataatatcataatcaatcaacatatatgtattttc-aacaatatcaccatcaattaaaatatatgcattaatcaacataaa |
46472963 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccatac |
159 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
46472964 |
ctatatcatatagttcaacaactccatac |
46472992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 44306506 - 44306318
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |
|
|
| T |
44306506 |
aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg |
44306407 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat |
202 |
Q |
| |
|
||| ||||||| ||| |||||||| ||||||||| |||| |||| |||||| ||||| ||| ||| ||||||||||||||||| |
|
|
| T |
44306406 |
tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat |
44306318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 16369723 - 16369574
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| | |||| ||||||||||| ||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||| ||||||| |
|
|
| T |
16369723 |
aatatcaccatcaattaacatatatgcgttcaccaacaatatcaccatcaattaacatatatgccttcaccaacaatataaccatcaattaatatatatg |
16369624 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccattt |
164 |
Q |
| |
|
| || |||||||||||| ||||||| |||||||||| | |||||||| |
|
|
| T |
16369623 |
cgttcaccaacatcaactaagtcatataattcaacaacttcctaccattt |
16369574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 16369744 - 16369660
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgc |
115 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16369744 |
aacatatatgcattcaccgacaatatcaccatcaattaacatatatgcgttcaccaacaatatcaccatcaattaacatatatgc |
16369660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 21539435 - 21539365
Alignment:
| Q |
101 |
aattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa |
171 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
21539435 |
aattaacatgtatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaa |
21539365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 16382411 - 16382494
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
16382411 |
aacatatatgcattcaccgacaatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatg |
16382494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 44306527 - 44306444
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
44306527 |
aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg |
44306444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 28719376 - 28719438
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
28719376 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
28719438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 13617699 - 13617804
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||| ||| ||| ||||||||||| |
|
|
| T |
13617699 |
catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca |
13617798 |
T |
 |
| Q |
197 |
ccttat |
202 |
Q |
| |
|
|||||| |
|
|
| T |
13617799 |
ccttat |
13617804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 39293086 - 39293003
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||| |||||| |||||| |||||||||| |
|
|
| T |
39293086 |
aacatatatgtattcaccaataatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatg |
39293003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 21676297 - 21676235
Alignment:
| Q |
32 |
acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
21676297 |
acatatatgcattcaccgacaatatcacaatcaattgacatatatgtatccaccaacaatatc |
21676235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 21676277 - 21676178
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| ||||||||| || ||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||||||||| |
|
|
| T |
21676277 |
aatatcacaatcaattgacatatatgtatccaccaacaatatcacaaccaacaaacatatatgcattcaccaacaatattgcaatcaatcaacatatatg |
21676178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 28719320 - 28719401
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
28719320 |
catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
28719401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 8564855 - 8564809
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
8564855 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
8564809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 45148464 - 45148526
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |||||||||| |
|
|
| T |
45148464 |
aatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatg |
45148526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 9641790 - 9641850
Alignment:
| Q |
32 |
acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa |
90 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
9641790 |
acatatatgcactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaa |
9641850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 15979273 - 15979209
Alignment:
| Q |
129 |
aactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaataca |
193 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||||||| ||| ||| | | |||||||| |
|
|
| T |
15979273 |
aactatatcatatagttcaacaacttcatacaatttctcacaatccaagtaaagtagaaaataca |
15979209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 16369745 - 16369697
Alignment:
| Q |
67 |
caacatatatgtattcaccaacaatatcctcatcaattaacatatatgc |
115 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
16369745 |
caacatatatgcattcaccgacaatatcaccatcaattaacatatatgc |
16369697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 15979336 - 15979303
Alignment:
| Q |
101 |
aattaacatatatgcattattcaacatcaactat |
134 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
15979336 |
aattaacatatatgcattactcaacatcaactat |
15979303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 14343046 - 14342859
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
116 |
Q |
| |
|
||||||||| ||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14343046 |
tatcacaac-aatcaacgtatacgcgttcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
14342948 |
T |
 |
| Q |
117 |
ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
14342947 |
ttattcaacatcaactatatcatattgttcaacaactccataccatttctcacaattcaattaatggagaaaatacaacacattatgat |
14342859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 20455363 - 20455189
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
20455363 |
aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
20455264 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
20455263 |
ctatatcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaaaatacaacacattatgat |
20455189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 21108409 - 21108581
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||||||||| |
|
|
| T |
21108409 |
aacatatatgtattcaccgacaatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtaatattcaacatcaa |
21108508 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
21108509 |
ctatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacaccttatg |
21108581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 11964850 - 11965024
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
11964850 |
aacatatatgcattcaccgacgatatcacaatcaattaacatatatgtattcaccgacaatatcacactcaatcaacatatatgcattaatcaacatcaa |
11964949 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||| || ||||||||||||| ||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
11964950 |
ctatattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
11965024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 20833309 - 20833202
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||| || |||||||| || |
|
|
| T |
20833309 |
catcacttaacatatatgcattattcaacatcaactatatcatatagttcaacaactccatattatttctcacaatacaagtaa-agagaaaatacatca |
20833211 |
T |
 |
| Q |
197 |
ccttatgat |
205 |
Q |
| |
|
|||||||| |
|
|
| T |
20833210 |
tcttatgat |
20833202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 20455342 - 20455280
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20455342 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
20455280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 24226764 - 24226678
Alignment:
| Q |
119 |
attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||| ||| || ||||| ||||||| |
|
|
| T |
24226764 |
attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaagtaaaacacattatgat |
24226678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 23414099 - 23414204
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||| ||| ||| ||||||||||| |
|
|
| T |
23414099 |
catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca |
23414198 |
T |
 |
| Q |
197 |
ccttat |
202 |
Q |
| |
|
|||||| |
|
|
| T |
23414199 |
ccttat |
23414204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 33627686 - 33627605
Alignment:
| Q |
116 |
attattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||| ||| |||||||||||| |
|
|
| T |
33627686 |
attaatcaacttcaactatatcatatagttcaacaactccatacaatttttcataatacaagtaaaggagaaaatacaacac |
33627605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 21108430 - 21108494
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgta |
79 |
Q |
| |
|
||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21108430 |
aatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgta |
21108494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 11764833 - 11764773
Alignment:
| Q |
26 |
caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
11764833 |
caatcaacatatatgtattcaccaacaatatcacaatc-atcaatatatatgtattcaccaa |
11764773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 11964872 - 11964933
Alignment:
| Q |
16 |
atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
||||||||| |||| |||||||||| ||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
11964872 |
atatcacaatcaattaacatatatgtattcaccgacaatatcacactcaatcaacatatatg |
11964933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 11764837 - 11764802
Alignment:
| Q |
59 |
caatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
11764837 |
caatcaatcaacatatatgtattcaccaacaatatc |
11764802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 14343012 - 14342950
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||| |||||| |||||||||| |
|
|
| T |
14343012 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
14342950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 20455397 - 20455317
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||| | |||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
20455397 |
catatatgaaatcaccaacac-atcaccatcacttaacatatatgcattcaccaacaatatcacaatcaattaacatatatg |
20455317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 14343085 - 14343051
Alignment:
| Q |
52 |
aatatcacaatcaatcaacatatatgtattcacca |
86 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14343085 |
aatatcacaatcaattaacatatatgtattcacca |
14343051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 11964816 - 11964896
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||| | |||||||||| ||||||| || ||||| ||||||||||||||||| |
|
|
| T |
11964816 |
catatatgcaatcaccaacac-atcaccatcacttaacatatatgcattcaccgacgatatcacaatcaattaacatatatg |
11964896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 33)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 25756873 - 25757063
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25756873 |
aatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg |
25756972 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
25756973 |
cattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgat |
25757063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 25294873 - 25295043
Alignment:
| Q |
35 |
tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactat |
134 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
25294873 |
tatatgaattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactat |
25294972 |
T |
 |
| Q |
135 |
atcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||| |||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
25294973 |
atcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgat |
25295043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 11543414 - 11543559
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
11543414 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatgcattaatcaacatcaa |
11543513 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaa |
176 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
11543514 |
ctatatcatatagttcaacaactccatactatttctcacaattcaa |
11543559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 45560484 - 45560310
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| || |||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
45560484 |
aacaaatatgcattcaccgacaatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatgcattaatcaacatcaa |
45560385 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||| | || ||||||| ||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
45560384 |
ctatatcatatagttcaacaactccatacaacttctcacaatccaagtaaaggagaaaatacaacactttatgat |
45560310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 22312569 - 22312714
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
22312569 |
aacatatatgcattcaccgacaatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatgcattaatcaacatcaa |
22312668 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaa |
176 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
22312669 |
ctatatcatatagttcaacaactccatactatttctcacaattcaa |
22312714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 25608941 - 25609111
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
25608941 |
aatatcacaaccaatcaacacatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaac-----------caatcaacatatatg |
25609029 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| ||| ||| ||||||||||| |
|
|
| T |
25609030 |
tattaatccacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca |
25609111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 3845409 - 3845250
Alignment:
| Q |
32 |
acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaac |
131 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||| ||||| |||||||||||||| || ||| |||||| |
|
|
| T |
3845409 |
acatatatgcattcaccaacaatatcaacatcaattgacatatatgcattcacc--caatatcaccatcacttaacatatatgcactaatcattatcaac |
3845312 |
T |
 |
| Q |
132 |
tatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaataca |
193 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||| |||||||| |
|
|
| T |
3845311 |
tatatcatatagttcaacaactccatacaatttctcacaatccaagtaaaggagaaaataca |
3845250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 20177267 - 20177079
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |
|
|
| T |
20177267 |
aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg |
20177168 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat |
202 |
Q |
| |
|
||| ||||||| ||| |||||||| ||||||||| |||| |||| |||||| ||||| ||| ||| ||||||||||||||||| |
|
|
| T |
20177167 |
tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat |
20177079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 20221994 - 20221806
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |
|
|
| T |
20221994 |
aatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatg |
20221895 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaa-ttcaattaatggaaaaaatacaacaccttat |
202 |
Q |
| |
|
||| ||||||| ||| |||||||| ||||||||| |||| |||| |||||| ||||| ||| ||| ||||||||||||||||| |
|
|
| T |
20221894 |
tattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacaccttat |
20221806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 19332881 - 19332802
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19332881 |
aatatcacaaccaatcaacatatatgtatttaccaacaatatctcaatcaatcaacatatatgtattcaccaacaatatc |
19332802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 19332918 - 19332819
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
19332918 |
aatatcacaatcaattaacatatatgtattcacccacaatatcacaaccaatcaacatatatgtatttaccaacaatatctcaatcaatcaacatatatg |
19332819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 19332939 - 19332876
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
19332939 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcacccacaatatc |
19332876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 20177288 - 20177205
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
20177288 |
aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg |
20177205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 20222015 - 20221932
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
20222015 |
aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg |
20221932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 24238445 - 24238508
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
24238445 |
aacatatatgcattcaccgacaatatcacaatcaattaacttatatgtattcaccaacaatatc |
24238508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 25608920 - 25608983
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
25608920 |
aacatatatgcattcaccgacaatatcacaaccaatcaacacatatgtattcaccaacaatatc |
25608983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 16000904 - 16000986
Alignment:
| Q |
32 |
acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
16000904 |
acatatatgcaatcaccaacaacatctcaatcactcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
16000986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 16000940 - 16000993
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac |
84 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16000940 |
aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcac |
16000993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 25756856 - 25756935
Alignment:
| Q |
35 |
tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
25756856 |
tatatgcattcaccggcaatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatg |
25756935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11543435 - 11543497
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
11543435 |
aatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatg |
11543497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24238466 - 24238524
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacata |
73 |
Q |
| |
|
|||||||||| |||| ||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24238466 |
aatatcacaatcaattaacttatatgtattcaccaacaatatcacaatcaatcaacata |
24238524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25294890 - 25294952
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
25294890 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg |
25294952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 7469137 - 7469238
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| ||| | ||||||||||||||||||||||||||||||||| | || ||| ||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
7469137 |
aacatgtattcattaatcagcttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatg |
7469236 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
7469237 |
at |
7469238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 22312590 - 22312652
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
||||| |||| |||| ||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22312590 |
aatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatg |
22312652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 45560463 - 45560401
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| || ||||||| |||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
45560463 |
aatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatg |
45560401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 11543379 - 11543460
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| | |||||||||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
11543379 |
catatatgtaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
11543460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 19332793 - 19332756
Alignment:
| Q |
121 |
tcaacatcaactatatcatatagttcaacaactccata |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19332793 |
tcaacatcaactatatcatatagttcaacaactccata |
19332756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19332844 - 19332787
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacat |
72 |
Q |
| |
|
|||||| ||| |||| |||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
19332844 |
aatatctcaatcaatcaacatatatgtattcaccaacaatatcacaaccaatcaacat |
19332787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 22312532 - 22312615
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
22312532 |
aacatatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatattacaatcaattgacatatatg |
22312615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 22498577 - 22498526
Alignment:
| Q |
108 |
atatatgcattattcaacatcaactatatcatatagttcaacaactccatac |
159 |
Q |
| |
|
|||||| ||||| |||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
22498577 |
atatatacattaatcaacatcaactatataatatagttcaaccactccatac |
22498526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 17265756 - 17265806
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt |
81 |
Q |
| |
|
|||||||||||||||||| | ||||||||| ||||| ||||||||| |||| |
|
|
| T |
17265756 |
aacatatatgcattcaccgaaaatatcacactcaattaacatatatatatt |
17265806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 18042830 - 18042772
Alignment:
| Q |
99 |
tcaattaacatatatgcatta-ttcaacatcaactatatcatatagttcaacaactcca |
156 |
Q |
| |
|
|||||| | |||||| ||||| ||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
18042830 |
tcaattgatatatatacattaattcaacatcaactatataatatagttcaaccactcca |
18042772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 11543379 - 11543427
Alignment:
| Q |
70 |
catatatgtattcaccaacaatatcctcatcaattaacatatatgcatt |
118 |
Q |
| |
|
|||||||||| |||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
11543379 |
catatatgtaatcaccaacaaaatcaccatcacttaacatatatgcatt |
11543427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 15131 - 14943
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
116 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15131 |
tatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgca |
15032 |
T |
 |
| Q |
117 |
ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
15031 |
ttaatcgacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
14943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 15154 - 15071
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| |||||||| | | ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
15154 |
aacatatacacattcaccgaaattatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
15071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 15096 - 15034
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
15096 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg |
15034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1204 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold1204
Description:
Target: scaffold1204; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 1505 - 1323
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1505 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaatattctcatcaattaacatatatg |
1406 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||| ||| |||||||||||| |
|
|
| T |
1405 |
caatattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacac |
1323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1204; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 1526 - 1463
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1526 |
aacatatacgcattcaccgataatatcacaatcaattaacatatatgtattcaccaacaatatc |
1463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 11401475 - 11401649
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
11401475 |
aacatatatgcattcaccgacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaa |
11401574 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| |||||||||||||||||||| ||||| |||| ||||||||||| ||| ||| |||| ||| ||| ||||||| |
|
|
| T |
11401575 |
ctttatcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaacacagcacattatgat |
11401649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 17759729 - 17759543
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17759729 |
aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatg |
17759630 |
T |
 |
| Q |
115 |
cattattcaa----catcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
|| ||||||| |||||||||||||||||| || |||||||||||| ||| ||||||| ||||||| || |||||||||||| |
|
|
| T |
17759629 |
caatattcaacatgcatcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac |
17759543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 19061049 - 19060863
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19061049 |
aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatg |
19060950 |
T |
 |
| Q |
115 |
cattattcaa----catcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
|| ||||||| |||||||||||||||||| || |||||||||||| ||| ||||||| ||||||| || |||||||||||| |
|
|
| T |
19060949 |
caatattcaacatgcatcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac |
19060863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 52 - 205
Target Start/End: Original strand, 8603542 - 8603695
Alignment:
| Q |
52 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaa |
151 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8603542 |
aatatcacaatcaattgatatatatgtattcaccaacaatatccttatcaattaacacatatgcattattcaacatcaactatatcatatagttcaacaa |
8603641 |
T |
 |
| Q |
152 |
ctccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
| ||||| |||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
8603642 |
catcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
8603695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 5229376 - 5229206
Alignment:
| Q |
34 |
atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaacta |
133 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| | |||||||||| ||||||| |||||||| |||||| ||||||||||||||| || |||||||||| |
|
|
| T |
5229376 |
atatatgcaatcaccaacac-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaatcaacatatatgcattaatcgacatcaacta |
5229278 |
T |
 |
| Q |
134 |
tatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||| ||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
5229277 |
tatcatattgttcaacaactccatacgatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
5229206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 38377078 - 38376904
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| | |||||| |||||||| ||| ||||||| | |
|
|
| T |
38377078 |
aacatatatgcattcactgacaatatcacaatcaattaacatacatgtattcaccaacaatatcataatcaatcaacatatacatattcaccaacatcga |
38376979 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| |||||||| ||||||||| |||| |||| ||| ||| ||| ||| ||| |||||| ||||||||||||| |
|
|
| T |
38376978 |
ctttatcatatgattcaacaacatcatattatttctcaaaatccaagtaaaggagaaaatataacaccttatgat |
38376904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 25105267 - 25105174
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacacc |
198 |
Q |
| |
|
||||| ||| ||||| ||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||| ||| ||||||||||||| |
|
|
| T |
25105267 |
aacatgtattcattaatcaacttcaactatatcatttagttcaacaactccatacaatttcccacaattcaagtaaaggagaaaatacaacacc |
25105174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 17759747 - 17759687
Alignment:
| Q |
34 |
atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
17759747 |
atatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatatc |
17759687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 19061067 - 19061007
Alignment:
| Q |
34 |
atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19061067 |
atatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatatc |
19061007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 38377057 - 38376983
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca |
89 |
Q |
| |
|
|||||||||| |||| |||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
38377057 |
aatatcacaatcaattaacatacatgtattcaccaacaatatcataatcaatcaacatatacatattcaccaaca |
38376983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 11516833 - 11516772
Alignment:
| Q |
26 |
caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11516833 |
caattaacatatatgtattcaccaacaacatctcaatcaatcaacatatatgtattcaccaa |
11516772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17392274 - 17392337
Alignment:
| Q |
26 |
caataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca |
89 |
Q |
| |
|
|||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
17392274 |
caattaacatatatgtattcaccaacaacatcacaataaatcaacatatatgtattcactaaca |
17392337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 5229343 - 5229297
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5229343 |
aacatatatgcattcaccgacaatatcacaatcaatcaacatatatg |
5229297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11401496 - 11401558
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
11401496 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatg |
11401558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 43428843 - 43428742
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||| |||| ||| ||| ||| |||| || ||||||||| |||||||| |
|
|
| T |
43428843 |
aacatgtattcattaatcaacttccactatatcatatagttcaacaactccatacaatttctcataatacaagtaatagaggaaaatacaataccttatg |
43428744 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
43428743 |
at |
43428742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 11516864 - 11516746
Alignment:
| Q |
34 |
atatatgcattcaccaacaatat-cacaat-caatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaac |
131 |
Q |
| |
|
||||||||| |||||||||| || |||||| |||| ||||||||||||||||||||||| ||| |||||| |||||||||| ||| ||| |||||| |
|
|
| T |
11516864 |
atatatgcaatcaccaacaacattcacaattcaattaacatatatgtattcaccaacaacatctcaatcaatcaacatatatgtattcaccaatatcaac |
11516765 |
T |
 |
| Q |
132 |
tatatcatatagttcaaca |
150 |
Q |
| |
|
| | ||| ||||||||||| |
|
|
| T |
11516764 |
tttttcacatagttcaaca |
11516746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 14181342 - 14181293
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtat |
80 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
14181342 |
aacatatatgcattcaccgacattatcacaatcaattaacatatatgtat |
14181293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 18968979 - 18969080
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| || || |||||||||||||||||||||||| |||||| | | || ||| ||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
18968979 |
aacatgtattcattaatccacttcaactatatcatatagttcaacagctccattcaacttctcataatacaagtaaaggaggaaaatacaacaccttatg |
18969078 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
18969079 |
at |
18969080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 40040456 - 40040403
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac |
84 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| | ||||||| ||||||| |
|
|
| T |
40040456 |
aacatatatgcattcaccgacattatcacaatcaattagcatatatttattcac |
40040403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 17392241 - 17392301
Alignment:
| Q |
32 |
acatatatgcattcaccaacaatat-cacaat-caatcaacatatatgtattcaccaacaa |
90 |
Q |
| |
|
||||||||||| |||||||||| || |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
17392241 |
acatatatgcaatcaccaacaacattcacaattcaattaacatatatgtattcaccaacaa |
17392301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 37917707 - 37917651
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||||||||||||||||| ||| ||||| ||||||| | ||||||| |||||||||| |
|
|
| T |
37917707 |
aacatatatgcattcaccgacattatcagaatcaattagcatatatttattcaccaa |
37917651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 38377113 - 38377036
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacata |
110 |
Q |
| |
|
|||||||||| ||| |||||| ||||| |||| | |||||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
38377113 |
catatatgcaatcatcaacaaaatcaccatcacttaacatatatgcattcactgacaatatcacaatcaattaacata |
38377036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 31413647 - 31413599
Alignment:
| Q |
32 |
acatatatgcattcaccaacaatatcacaatcaatcaacatatatgtat |
80 |
Q |
| |
|
||||||||||| |||||||||| |||| ||| |||||| |||||||||| |
|
|
| T |
31413647 |
acatatatgcactcaccaacaacatcataattaatcaatatatatgtat |
31413599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 22331603 - 22331792
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
22331603 |
aatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatgtatt-accaacaatatcaccatcaattaatatatatg |
22331701 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||| || ||||||||| ||||||| |
|
|
| T |
22331702 |
cattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaagatacaacacattatgat |
22331792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 18534727 - 18534901
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
18534727 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
18534826 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
18534827 |
ctatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
18534901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 24562137 - 24561963
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| | |
|
|
| T |
24562137 |
aacatatatgcattcaccgacaatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcga |
24562038 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| ||||||||| ||||||||| ||||| |||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
24562037 |
ctttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
24561963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 6093725 - 6093894
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| | |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6093725 |
aatatcacaatcaatcagcatatatgtattcaccaacaatatcctcatcaat--------atgtattcaccaacaatatcctcatcaattaacatatatg |
6093816 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatac |
192 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||| ||| ||| ||||||| |
|
|
| T |
6093817 |
caatattcaacaataactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatac |
6093894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 43641704 - 43641790
Alignment:
| Q |
119 |
attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
43641704 |
attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
43641790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 20272259 - 20272430
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||| |||||||||| ||||| | || | | |||||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||| | |
|
|
| T |
20272259 |
aacatatatgcaatcaccaacaaaatcaccaacacttagcatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacatcga |
20272358 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttat |
202 |
Q |
| |
|
|| ||||||||| ||||| ||| ||||| |||| ||||||| ||| ||| ||| |||||||||||| |||| |
|
|
| T |
20272359 |
ctttatcatataattcaataacatcatacaatttctcacaatccaagtaaaggagaaaatacaacacattat |
20272430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 6093706 - 6093776
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaat |
103 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6093706 |
catatatgcattcgtcgacaatatcacaatcaatcagcatatatgtattcaccaacaatatcctcatcaat |
6093776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 24840690 - 24840873
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
116 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||| ||||| |||||| | |||| || |
|
|
| T |
24840690 |
tatcacaatcaattaacatatatgttttcaccaacaatatctcaatcaatcaacatatatgcattcacaaaccatatcacaatcaatca----atataca |
24840785 |
T |
 |
| Q |
117 |
ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| ||||||| ||| ||||||||| ||||||||| |||| |||| ||||||||||| | | ||| |||||||||||| ||||||| |
|
|
| T |
24840786 |
ttcaccaacatcgactttatcatataattcaacaacatcatattatttctcacaattcaagtga-ggagaaaatacaacacattatgat |
24840873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 22331582 - 22331670
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatta |
119 |
Q |
| |
|
|||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| |
|
|
| T |
22331582 |
aacacatatgtattcatcaataatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatgtatta |
22331670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 29113144 - 29113200
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29113144 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaa |
29113200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 45618754 - 45618691
Alignment:
| Q |
73 |
atatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatat |
136 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45618754 |
atatgcattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactatat |
45618691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 19434756 - 19434670
Alignment:
| Q |
119 |
attcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||| |||| ||||||||||| ||| ||| ||||||||| || ||||||| |
|
|
| T |
19434756 |
attcaacatcaactacatcatatagttcaaaaactccttacaatttctcacaattcaagtaaaggagaaaatacaatacattatgat |
19434670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 24562116 - 24562054
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24562116 |
aatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
24562054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 18534748 - 18534810
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
18534748 |
aatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatg |
18534810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 24562172 - 24562091
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
24562172 |
catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaaaatcaattaacatatatg |
24562091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 45618405 - 45618474
Alignment:
| Q |
136 |
tcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||||| ||| || |||||||||||| ||||||| |
|
|
| T |
45618405 |
tcatatagttcaacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaacacattatgat |
45618474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 24840725 - 24840779
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaa |
69 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
24840725 |
aatatctcaatcaatcaacatatatgcattcacaaaccatatcacaatcaatcaa |
24840779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 45618754 - 45618713
Alignment:
| Q |
36 |
atatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
45618754 |
atatgcattcaccaacaatatcaccatcaattaacatatatg |
45618713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 29113144 - 29113224
Alignment:
| Q |
68 |
aacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaa |
148 |
Q |
| |
|
|||||||||| ||||||| |||||||| ||||||||||||||||| ||| ||| ||||||| |||||||| ||||| |
|
|
| T |
29113144 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaatatcaacttcatcatataattcaa |
29113224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 45619330 - 45619298
Alignment:
| Q |
102 |
attaacatatatgcattattcaacatcaactat |
134 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
45619330 |
attaacatatatgcattactcaacatcaactat |
45619298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 112; Significance: 9e-57; HSPs: 7)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 5907 - 5736
Alignment:
| Q |
34 |
atatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaacta |
133 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
5907 |
atatatgcattcaccgacaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaacta |
5808 |
T |
 |
| Q |
134 |
tatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
5807 |
tatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
5736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 1511 - 1356
Alignment:
| Q |
50 |
acaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaac |
149 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
1511 |
acaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactatatcatatagttcaac |
1412 |
T |
 |
| Q |
150 |
aactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
1411 |
aactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
1356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 1509 - 1447
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1509 |
aatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
1447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5889 - 5827
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5889 |
aatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
5827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 36063 - 35993
Alignment:
| Q |
42 |
attcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatat |
113 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||| |
|
|
| T |
36063 |
attcaccaacaatatcacaatca-tcaacatatatgtattcactaacaatatctcaatcaatcaacatatat |
35993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 36038 - 35982
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||||||||| |||||| ||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
36038 |
aacatatatgtattcactaacaatatctcaatcaatcaacatatatattttcaccaa |
35982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 36102 - 36048
Alignment:
| Q |
35 |
tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
36102 |
tatatgtattcaccaacaatatcacaatcaatgaacat-----tattcaccaacaatatc |
36048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 112; Significance: 9e-57; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 11374144 - 11374005
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11374144 |
aatatcaccatcaattaacatatacatattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
11374045 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactc |
154 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11374044 |
caatattcaacatcaactatatcatatagttcaacaactc |
11374005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 29161713 - 29161586
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29161713 |
aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatgcaatattcaacatcaa |
29161614 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccata |
158 |
Q |
| |
|
|||||||||||||||| ||||||||||| |
|
|
| T |
29161613 |
ctatatcatatagttcgacaactccata |
29161586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 23220601 - 23220774
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
23220601 |
aacatatatgcattcaccgacaatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
23220700 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||| ||||| ||||| ||||||| |
|
|
| T |
23220701 |
ctatatcatatagttcaacaact-catataatttctcacaattcaagtaaaggagaaaatgaaacacattatgat |
23220774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 16135183 - 16135324
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
16135183 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacagtcaatcaacatatatgcattaatcaacatcaa |
16135282 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaat |
172 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||| ||||||| |
|
|
| T |
16135283 |
ctatatcatatagttcaataactccatacaatttctcacaat |
16135324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 25650019 - 25650108
Alignment:
| Q |
52 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatat |
141 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
25650019 |
aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcactattcaacatcaactacatcatat |
25650108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 17084584 - 17084450
Alignment:
| Q |
71 |
atatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcaca |
170 |
Q |
| |
|
|||||| |||||||||| | |||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
17084584 |
atatatatattcaccaatagtatcacaatcaatcaacatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcaca |
17084485 |
T |
 |
| Q |
171 |
attcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| ||| ||| || |||||||||||| ||||||| |
|
|
| T |
17084484 |
atacaagtaaatgagaaaatacaacacattatgat |
17084450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 22594837 - 22594749
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcatta |
119 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| |
|
|
| T |
22594837 |
aacatatatgtattcaccaataatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatta |
22594749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 29161764 - 29161667
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
29161764 |
tatcacaaccaatcaacatatatatattcaccgacaatatctcaatccatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
29161667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 21930797 - 21930859
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatat |
93 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21930797 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatat |
21930859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22594816 - 22594750
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt |
81 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22594816 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatt |
22594750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 29161824 - 29161761
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
29161824 |
aacatatatgcattcaccgacaatatcccaatcaatcaacatatatgtattcaccaacagtatc |
29161761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 11374165 - 11374082
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
11374165 |
aacatatatgcattcaccgacaatatcaccatcaattaacatatacatattcaccaacaatatcacaatcaatcaacatatatg |
11374082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 29161803 - 29161724
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||| ||| |||| |||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
29161803 |
aatatcccaatcaatcaacatatatgtattcaccaacagtatcacaaccaatcaacatatatatattcaccgacaatatc |
29161724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 16135204 - 16135266
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16135204 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacagtcaatcaacatatatg |
16135266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 23220622 - 23220684
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23220622 |
aatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
23220684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4172931 - 4172874
Alignment:
| Q |
35 |
tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaata |
92 |
Q |
| |
|
||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||| |
|
|
| T |
4172931 |
tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata |
4172874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4228540 - 4228483
Alignment:
| Q |
35 |
tatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaata |
92 |
Q |
| |
|
||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||| |
|
|
| T |
4228540 |
tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata |
4228483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 23220566 - 23220647
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||| |||||| ||||| |||| | |||||||||| ||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
23220566 |
catatatgcaatcatcaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcataatcaattaacatatatg |
23220647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 29161692 - 29161630
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
29161692 |
aatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatg |
29161630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 21930762 - 21930843
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||||||||| ||| | |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
21930762 |
catatatgcaatcaccaacaaaatcgccatcagttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
21930843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 18104767 - 18104732
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaat |
66 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18104767 |
aacatatatgcattcaccgacaatatcacaatcaat |
18104732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 31162164 - 31162105
Alignment:
| Q |
146 |
caacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
31162164 |
caacaacttcatacagtttctcacaattcaagtaaaggagaaaatacaacaccttatgat |
31162105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 4172931 - 4172885
Alignment:
| Q |
72 |
tatatgtattcaccaacaatatcctcatcaattaacatatatgcatt |
118 |
Q |
| |
|
|||||| |||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
4172931 |
tatatgcattcaccaacaatatcaccatcatttaacatatatgcatt |
4172885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 4228540 - 4228494
Alignment:
| Q |
72 |
tatatgtattcaccaacaatatcctcatcaattaacatatatgcatt |
118 |
Q |
| |
|
|||||| |||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
4228540 |
tatatgcattcaccaacaatatcaccatcatttaacatatatgcatt |
4228494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25650019 - 25650081
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||| ||| |||| |||||||||| |||||||||||||||| |||||| |||||||||| |
|
|
| T |
25650019 |
aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
25650081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 21930818 - 21930859
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatat |
56 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||| |
|
|
| T |
21930818 |
aatatcacaatcaattaacatatatgtattcaccaacaatat |
21930859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 22463418 - 22463317
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| ||||| ||||||||||| |||||||||| | || | || |||| ||||||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
22463418 |
aacatgtattcattaatcaacttcaactatatcctatagttcaaaaccttcgcacaatttctcacaatccaagtaaaggaggaaaatacaacaccttatg |
22463319 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
22463318 |
at |
22463317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 22594702 - 22594642
Alignment:
| Q |
32 |
acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa |
90 |
Q |
| |
|
||||||||||| ||||||||||| | || ||||| ||||||||||| ||||||||||||| |
|
|
| T |
22594702 |
acatatatgcactcaccaacaattcaccataatcattcaacatatatatattcaccaacaa |
22594642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 26505689 - 26505737
Alignment:
| Q |
68 |
aacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
116 |
Q |
| |
|
||||||| || |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
26505689 |
aacatatgtggattcaccaacaatatcaccattaattaacatatatgca |
26505737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 9695 - 9877
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
||||| |||| |||| |||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
9695 |
aatatgacaatcaattaacatatatgtattgaccaacaatatcacaatcaatcaacatatctatattcaccaacaatatcaccatcaattatcatatatg |
9794 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttt-tcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| || ||||||||||| |
|
|
| T |
9795 |
cattaatcaacatcaactatatcatatagttcaacaactccatacaattttctcacaattcaagtaaaagagaaaatacaaca |
9877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 9674 - 9754
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatat |
111 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||||||||| |||||||||||||| |||||||||||| |||||| ||||||| |
|
|
| T |
9674 |
aacatatatgcactcaccgacaatatgacaatcaattaacatatatgtattgaccaacaatatcacaatcaatcaacatat |
9754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 107; Significance: 8e-54; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 5371964 - 5371791
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
5371964 |
aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa |
5371865 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| |||||||||| || ||| |||||||||||| ||||||| |
|
|
| T |
5371864 |
ctatatcatatag-tcaacaactccatacagtttctcacaattcaggcaaaggagaaaatacaacacattatgat |
5371791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 12135029 - 12134844
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgca |
116 |
Q |
| |
|
|||||||| |||| |||||||||| |||||| || ||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
12135029 |
tatcacaatcaattaacatatatgtattcacaaa---tatcataaccaatcaacatatatgtattcaccaataatatcttcatcaattaacatagatgca |
12134933 |
T |
 |
| Q |
117 |
ttattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||| || |||||||||||| ||||||| |
|
|
| T |
12134932 |
ttattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaagagaaaatacaacactttatgat |
12134844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 19558232 - 19558406
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
||||||| |||||||| | ||||||| |||||| || ||||||||||||||||||||||||||| |||||| |||| ||||| |||| |||||||||| |
|
|
| T |
19558232 |
aacatatctgcattcatcgacaatataacaatccattaacatatatgtattcaccaacaatatcacaatcaatcaacagatatgtattaatcaacatcaa |
19558331 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||||||| |||||||||||| |||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
19558332 |
ctatatcatatggttcaacaactcgatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
19558406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 54364838 - 54364664
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||||| ||| ||||||| | |
|
|
| T |
54364838 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaacatcga |
54364739 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| ||||||||| ||||||||| ||||| |||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
54364738 |
ctttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
54364664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 17376823 - 17376660
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
17376823 |
aacatatatgcattcaccgacaatatcacaatcaatca---tatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaaccaacatcaa |
17376727 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacac |
197 |
Q |
| |
|
||| |||||||| || |||||| ||||| |||| ||||||||||| ||| ||| |||||||||||| |
|
|
| T |
17376726 |
ctaaatcatataatttaacaaccccatataatttctcacaattcaagtaaaggagaaaatacaacac |
17376660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 14570156 - 14570297
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||| ||| ||| ||||| |
|
|
| T |
14570156 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa |
14570255 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaat |
172 |
Q |
| |
|
|| |||||| | ||||||||| ||||| |||| ||||||| |
|
|
| T |
14570256 |
cttcatcataaaattcaacaacatcatactatttctcacaat |
14570297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 54364817 - 54364743
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca |
89 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
54364817 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaaca |
54364743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 14570177 - 14570249
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14570177 |
aatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaa |
14570249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5371943 - 5371881
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5371943 |
aatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
5371881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 12733052 - 12733136
Alignment:
| Q |
121 |
tcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| | ||||||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
12733052 |
tcaacttcaactatatcctatagttcaacaacttcgcaccatttctcacaatacaagtaaaggagaaaatacaacaccttatgat |
12733136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 12135052 - 12134999
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac |
84 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
12135052 |
aacatatatgcattcaccgacattatcacaatcaattaacatatatgtattcac |
12134999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 49070703 - 49070808
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
|||||||| | ||| || ||||| |||||||||||||||| |||||| |||||||||||||| ||| ||||||| ||| ||| ||| | ||||||||| |
|
|
| T |
49070703 |
catcaattgatatacatacattaatcaacatcaactatataatatagctcaacaactccatatactttctcacaatccaagtaaaggagagaatacaaca |
49070802 |
T |
 |
| Q |
197 |
ccttat |
202 |
Q |
| |
|
|||||| |
|
|
| T |
49070803 |
ccttat |
49070808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 19082410 - 19082289
Alignment:
| Q |
70 |
catatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcac |
169 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||| |||||| |||| ||||||| |||| |||||||| ||||| |||| ||| | |||| | || |
|
|
| T |
19082410 |
catatatacattcaccaacaatatcaccatcaattaatatatatacattcaccaacatcgactacatcatataattcaataacttcatgcaatttcttac |
19082311 |
T |
 |
| Q |
170 |
aattcaattaatggaaaaaata |
191 |
Q |
| |
|
||||||| ||| ||| |||||| |
|
|
| T |
19082310 |
aattcaagtaaaggagaaaata |
19082289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 38763665 - 38763766
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| || || ||||||||||||||||||||||||||| ||||| | |||||| ||| ||| ||| ||| |||||||||||||| ||| |
|
|
| T |
38763665 |
aacatgtattcattaatccacttcaactatatcatatagttcaacaacttcatacaacttttcataatacaagtaaaggaggaaaatacaacacctaatg |
38763764 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
38763765 |
at |
38763766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 5371998 - 5371918
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||| | |||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
5371998 |
catatatgaaatcaccaacac-atcaccatcacttaacatatatgcattcaccaacaatatcacaatcaattaacatatatg |
5371918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 13595455 - 13595395
Alignment:
| Q |
32 |
acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaa |
90 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
13595455 |
acatatatgcactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaa |
13595395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 14570122 - 14570202
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||| |||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
14570122 |
catatatgcactcaccgacaa-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
14570202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 19082410 - 19082354
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca |
89 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||| || |||||| ||||||||||| |
|
|
| T |
19082410 |
catatatacattcaccaacaatatcaccatcaattaatatatatacattcaccaaca |
19082354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 17213122 - 17213063
Alignment:
| Q |
146 |
caacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
17213122 |
caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgat |
17213063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 16226449 - 16226366
Alignment:
| Q |
121 |
tcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||| |||||||||| | |||||||||||||| ||| ||||||| ||| ||| || |||||||||||| ||||||| |
|
|
| T |
16226449 |
tcaacatcaatcatatcatataatccaacaactccatacaattcctcacaatccaagtaa-cgagaaaatacaacacattatgat |
16226366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 24237765 - 24237873
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaaca |
196 |
Q |
| |
|
|||||||| | ||| || ||||| |||||||||||||||| |||| ||||||||||||||| || | | ||| ||| ||| ||| ||||||||| | |
|
|
| T |
24237765 |
catcaattgatatacatacattaatcaacatcaactatatattatatctcaacaactccatacacgttcttataatccaagtaaaggagaaaatacaaaa |
24237864 |
T |
 |
| Q |
197 |
ccttatgat |
205 |
Q |
| |
|
||||||||| |
|
|
| T |
24237865 |
ccttatgat |
24237873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 33396200 - 33396371
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
33396200 |
aacatatatgcattcaccgacaatatcacaatcattcaacatatatgtattcaccgacaatatcctaatcaattaacatatatgcaacattcaacatcaa |
33396299 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaatt-caattaatggaaaaaatacaacacctta |
201 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| |||||||| ||| ||| || |||||||||||||||| |
|
|
| T |
33396300 |
ctatatcatatagttcaacaacatcatattatttctcacaattccaagtaaatgagaaaatacaacacctta |
33396371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 77309 - 77184
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||| |||||| |
|
|
| T |
77309 |
aacatatatgcattcacccacaatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaccatcaa |
77210 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactcca |
156 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
77209 |
ctatatcatatagtttaacaactcca |
77184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 20821876 - 20822062
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| |||||| ||||||||| |
|
|
| T |
20821876 |
aatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatgtactcaccaaccatatcacaatcaatcaacatatatt |
20821975 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|| | ||||||||| ||||||||| ||||||||| || || |||| ||||||| ||| ||| ||| ||||||| ||| ||||||| |
|
|
| T |
20821976 |
ca----cctacatcaactttatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaatacttcacattatgat |
20822062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 20821855 - 20821938
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| | |||||| |||||||||| |
|
|
| T |
20821855 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatg |
20821938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 77288 - 77226
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
77288 |
aatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatg |
77226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 20821820 - 20821901
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| |||||||||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
20821820 |
catatatgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
20821901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 46144659 - 46144760
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
||||| ||| ||||| || || ||||||||||||||||||||||||||||||||| | || ||| ||| ||| ||| ||| || ||||||||||||||| |
|
|
| T |
46144659 |
aacatgtattcattaatccacttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaacatacaacaccttatg |
46144758 |
T |
 |
| Q |
204 |
at |
205 |
Q |
| |
|
|| |
|
|
| T |
46144759 |
at |
46144760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 21224122 - 21224229
Alignment:
| Q |
70 |
catatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatca-tatagttcaacaactccataccatttttca |
168 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||| | |||||| | || |||||| |||||| |||| || | ||||||||||||||| |||| ||| |
|
|
| T |
21224122 |
catatatgcactcaccaacaatatcaccatcaattagcttatatgtaataatcaacaacaactacatcattacatctcaacaactccatacaatttctca |
21224221 |
T |
 |
| Q |
169 |
caattcaa |
176 |
Q |
| |
|
|||||||| |
|
|
| T |
21224222 |
caattcaa |
21224229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 40437579 - 40437479
Alignment:
| Q |
105 |
aacatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatga |
204 |
Q |
| |
|
||||| ||| ||||| ||||| |||| |||||| ||||||||||||||| | || |||| ||||||| ||| ||| ||| |||||||| ||||||||| |
|
|
| T |
40437579 |
aacatgtattcattaatcaacttcaattatatcctatagttcaacaacttcgcacaatttctcacaatccaagtaaaggaggaaatacaataccttatga |
40437480 |
T |
 |
| Q |
205 |
t |
205 |
Q |
| |
|
| |
|
|
| T |
40437479 |
t |
40437479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 49998602 - 49998526
Alignment:
| Q |
128 |
caactatatcatatagttcaacaactccataccatttttcacaattcaattaatgga-aaaaatacaacaccttatg |
203 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | || ||| ||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
49998602 |
caactatatcatatagttcaacaactacatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatg |
49998526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0231
Description:
Target: scaffold0231; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 14248 - 14075
Alignment:
| Q |
16 |
atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgc |
115 |
Q |
| |
|
||||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
14248 |
atatcacaatcaattaacatatatgtattcaccaacaatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgt |
14149 |
T |
 |
| Q |
116 |
attattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaa |
189 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||| || || |||| ||||||| ||| ||| ||| |||| |
|
|
| T |
14148 |
attcaccaacatcaactatatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaa |
14075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14212 - 14138
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaca |
89 |
Q |
| |
|
|||||||||| | || |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212 |
aatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgtattcaccaaca |
14138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 14270 - 14207
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14270 |
aacatatatgcatgcaccgaatatatcacaatcaattaacatatatgtattcaccaacaatatc |
14207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0174
Description:
Target: scaffold0174; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 21369 - 21208
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||| ||| |||| |||||||||| | ||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||| |
|
|
| T |
21369 |
aatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatgtatttactaacaatatcacaatcaatcaacatatatg |
21270 |
T |
 |
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaa |
176 |
Q |
| |
|
||| |||||||| ||| ||||||||| ||| ||||| ||||| |||| ||||||||||| |
|
|
| T |
21269 |
tattcatcaacatcgactttatcatataattccacaacatcatactatttctcacaattcaa |
21208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 21405 - 21307
Alignment:
| Q |
16 |
atatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||| |||| |||| |||||||||| | |||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||| |||||||||| |
|
|
| T |
21405 |
atattacaatcaatcaacatatatgtactcaccaacaatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatg |
21307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 11488 - 11656
Alignment:
| Q |
38 |
atgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaaca-tcaactatat |
136 |
Q |
| |
|
||||| |||||||||| ||||| |||| | |||||||||| ||||||| |||||||| ||||| | ||||||||||||||| |||||| |||||||||| |
|
|
| T |
11488 |
atgcaatcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaccatcagtcaacatatatgcattaatcaacattcaactatat |
11587 |
T |
 |
| Q |
137 |
catatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||||| ||||| ||| ||||||| ||| ||| ||| |||||| ||||||||||||| |
|
|
| T |
11588 |
aatataactcaacaacttcatacactttctcacaatccaagtaaaggagaaaataaaacaccttatgat |
11656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 11518 - 11564
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatg |
77 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||| |||||||||||| |
|
|
| T |
11518 |
aacatatatgcattcaccgacaatatcaccatcagtcaacatatatg |
11564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 62; Significance: 6e-27; HSPs: 6)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 255720 - 255643
Alignment:
| Q |
17 |
tatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
255720 |
tatcacaaccaattaagatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaaaatatc |
255643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 255648 - 255551
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatata |
112 |
Q |
| |
|
|||||||||| |||| |||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
255648 |
aatatcacaatcaatccacatatatttatttactaacaatatcacaatcaatccacatatatgtattcaccaacaatatcaaaatcaatcaacatata |
255551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 255685 - 255606
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
|||||||||| |||| |||||||||| ||||||||| |||||||||||||||| |||||||| |||| || ||||||||| |
|
|
| T |
255685 |
aatatcacaatcaatcaacatatatgtattcaccaaaaatatcacaatcaatccacatatatttatttactaacaatatc |
255606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 98412 - 98348
Alignment:
| Q |
32 |
acatatatgcattcaccaacaat--atcacaatcaatcaacatatatgtattcaccaacaatatc |
94 |
Q |
| |
|
||||||||| | ||||||||||| | |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
98412 |
acatatatgaactcaccaacaattcaccacaatcattcaacatatatatattcaccaacaatatc |
98348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 255720 - 255660
Alignment:
| Q |
54 |
tatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||| |||| || |||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
255720 |
tatcacaaccaattaagatatatgtattcaccaacaatatcacaatcaatcaacatatatg |
255660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 98374 - 98324
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtatt |
81 |
Q |
| |
|
||||||||| ||||||||||||||||| ||| |||||| ||||||||||| |
|
|
| T |
98374 |
aacatatatatattcaccaacaatatcataattaatcaatatatatgtatt |
98324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 247220 - 247079
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||| ||| ||| ||||| |
|
|
| T |
247220 |
aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa |
247121 |
T |
 |
| Q |
131 |
ctatatcatatagttcaacaactccataccatttttcacaat |
172 |
Q |
| |
|
|| |||||| | ||||||||| ||||| |||| ||||||| |
|
|
| T |
247120 |
cttcatcataaaattcaacaacatcatactatttctcacaat |
247079 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 247199 - 247127
Alignment:
| Q |
15 |
aatatcacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaa |
87 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
247199 |
aatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaa |
247127 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 247254 - 247174
Alignment:
| Q |
33 |
catatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatg |
114 |
Q |
| |
|
|||||||||| ||||| |||| ||||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
247254 |
catatatgcactcaccgacaa-atcaccatcacttaacatatatgcattcaccgacaatatcacaatcaattaacatatatg |
247174 |
T |
 |
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Target: scaffold0468 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 12284 - 12214
Alignment:
| Q |
106 |
acatatatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaa |
176 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
12284 |
acatatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaatttctcacaattcaa |
12214 |
T |
 |
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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 4839 - 4929
Alignment:
| Q |
115 |
cattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| |||| ||||||||||| |||||| ||||||||| ||||| ||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
4839 |
cattaatcaatatcaactatataatatagctcaacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
4929 |
T |
 |
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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 8511 - 8429
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatat |
113 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| ||||||||||||| || |||||||||| |||||| ||||||||| |
|
|
| T |
8511 |
aacatatatgcattcaccgacaatgccacaatcaattaacatatatgtatccatcaacaatatcacaatcaataaacatatat |
8429 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8485 - 8429
Alignment:
| Q |
20 |
cacaaccaataaacatatatgcattcaccaacaatatcacaatcaatcaacatatat |
76 |
Q |
| |
|
||||| |||| |||||||||| || || ||||||||||||||||||| ||||||||| |
|
|
| T |
8485 |
cacaatcaattaacatatatgtatccatcaacaatatcacaatcaataaacatatat |
8429 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 8412 - 8322
Alignment:
| Q |
115 |
cattattcaacat-caactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||| ||||||| ||||||||| |||||| | ||||||| ||||| ||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
8412 |
cattaatcaacattcaactatataatatagct-aacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
8322 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 75912 - 75965
Alignment:
| Q |
31 |
aacatatatgcattcaccaacaatatcacaatcaatcaacatatatgtattcac |
84 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| | || |||||||||||| |
|
|
| T |
75912 |
aacatatatgcattcaccgacaatatcacaatcaattagcacatatgtattcac |
75965 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0601 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0601
Description:
Target: scaffold0601; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 2280 - 2197
Alignment:
| Q |
122 |
caacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
||||||| ||| ||||||||| ||||||||| |||| |||| ||||||| ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
2280 |
caacatcgactttatcatataattcaacaacatcatattatttctcacaatccaagtaaaggagaaaatacaacaccttatgat |
2197 |
T |
 |
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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 44900 - 44793
Alignment:
| Q |
97 |
catcaattaacatatatgcattattcaacatcaact--atatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaa |
194 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||||||| |||| |||||| |||||||||| |||| ||| ||||| | ||| || ||| ||||||||| |
|
|
| T |
44900 |
catcaattgatatatatacattaatcaacatcaactatatataatatagctcaacaactctatacactttctcacattccaagtagaggagaaaatacaa |
44801 |
T |
 |
| Q |
195 |
caccttat |
202 |
Q |
| |
|
|||||||| |
|
|
| T |
44800 |
caccttat |
44793 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 34720 - 34645
Alignment:
| Q |
129 |
aactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| ||| ||||| | ||| ||| ||| |||||||||||||||||||| |
|
|
| T |
34720 |
aactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgat |
34645 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0153 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0153
Description:
Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 755 - 850
Alignment:
| Q |
110 |
atatgcattattcaacatcaactatatcatatagttcaacaactccataccatttttcacaattcaattaatggaaaaaatacaacaccttatgat |
205 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||| |||||||||| ||| ||| ||||||| ||| ||| ||| |||||||||||| ||||||| |
|
|
| T |
755 |
atatgcattaatcaacataaactatatcctatcgttcaacaacatcatgtactttctcacaatccaagtaaaggagaaaatacaacacattatgat |
850 |
T |
 |
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