View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6895_low_11 (Length: 218)
Name: NF6895_low_11
Description: NF6895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6895_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 36943580 - 36943392
Alignment:
| Q |
14 |
ataatactccatacagatgatacttaaaaaatttagtgaatcaactcacttcaaccatgaaccaatagtgtctaaggattgattatttgaggattcaacc |
113 |
Q |
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| T |
36943580 |
ataacactccatacagatgatacttaaaaattttagtgaatcaactcacttcaaccatgaaccaatagtgtctaaggattgattatttgaggattcaacc |
36943481 |
T |
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| Q |
114 |
gcaattttgcagctccaacgatagaaagcagttaaattatgacccaaactcttattgatttggtgtttgattgaatttttaaagtaaat |
202 |
Q |
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| T |
36943480 |
gcaattttgcagctccaacgatagaaagcagttaaattatgacccaaactcttattgatttggtgtttgattgaatttttaaagtaaat |
36943392 |
T |
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