View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6896_low_3 (Length: 502)

Name: NF6896_low_3
Description: NF6896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6896_low_3
NF6896_low_3
[»] chr5 (15 HSPs)
chr5 (26-484)||(13393686-13394144)
chr5 (272-484)||(13389279-13389491)
chr5 (36-484)||(13385458-13385910)
chr5 (300-484)||(13412939-13413123)
chr5 (72-202)||(13389570-13389700)
chr5 (307-447)||(13426182-13426322)
chr5 (307-447)||(13419291-13419431)
chr5 (71-197)||(13453453-13453579)
chr5 (309-443)||(13373035-13373169)
chr5 (301-447)||(13453789-13453935)
chr5 (319-484)||(13446854-13447019)
chr5 (310-461)||(13378832-13378983)
chr5 (86-198)||(13425953-13426065)
chr5 (86-203)||(13419063-13419180)
chr5 (133-185)||(13412762-13412814)
[»] chr4 (1 HSPs)
chr4 (60-484)||(47600857-47601290)
[»] chr8 (2 HSPs)
chr8 (337-445)||(28430701-28430809)
chr8 (64-197)||(28431150-28431283)
[»] chr1 (1 HSPs)
chr1 (384-443)||(8354109-8354168)


Alignment Details
Target: chr5 (Bit Score: 383; Significance: 0; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 26 - 484
Target Start/End: Complemental strand, 13394144 - 13393686
Alignment:
Q  26 cacacaataacttacccattattaaaggaatgtgagggagctccggaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaacc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13394144 cacacaataacttacccattattaaaggaatgtgagggagctccggaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaacc 13394045  T
Q  126 aactagaggtaagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacccatcgcagcctataaaatcatcgacatttattaattaatc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13394044 aactagaggtaagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacccatcgcagcctataaaatcatcgacatttattaattaatc 13393945  T
Q  226 aattaccatttccaattatgaatattattctaactttgattatgtatttgtacctgcattttatcttggtcatgacttataagaaatgaatcagctccta 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13393944 aattaccatttccaattatgaatattattctaactttgattatgtatttgtacctgcattttatcttggtcatgacttataagaaatgaatcagctccta 13393845  T
Q  326 ggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagccc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||||| ||||| ||||| |||||| ||| ||||||||| ||    
T  13393844 ggttttctattgcttctttctctttgttgggtgatgtactaattactgttacattagctccaaaagcttttgcaaacttcacacccaagtgaccaagtcc 13393745  T
Q  426 accaagaccaacaacacctatacgaagaccaggtttatcgagtccataatatctaagag 484  Q
    |||||||||||||| |||||||   | |||||| || ||||||||| |||||| |||||    
T  13393744 accaagaccaacaatacctatattcataccaggcttgtcgagtccaaaatatcgaagag 13393686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 272 - 484
Target Start/End: Complemental strand, 13389491 - 13389279
Alignment:
Q  272 tttgtacctgcattttatcttggtcatgacttataagaaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcac 371  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  13389491 tttgtacctgcattttctcttggtcacgacttatcagaaatgaatcggctcctaagtgttctattgcttctttctctttgttgggtgatgtactaatcac 13389392  T
Q  372 tgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagcccaccaagaccaacaacacctatacgaagaccaggtttatcgagtcca 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13389391 tgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagcccaccaagaccaacaacacctatacgaagaccaggtttatcgagtcca 13389292  T
Q  472 taatatctaagag 484  Q
    |||||||||||||    
T  13389291 taatatctaagag 13389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 36 - 484
Target Start/End: Complemental strand, 13385910 - 13385458
Alignment:
Q  36 cttacccattattaaaggaatgtgagggagctccggaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaaccaactagaggt 135  Q
    ||||||||  |||||||||| |   |||| |||| |||||||||||||| |||| ||||||||||||||||| ||| | || | ||| |||| ||| ||     
T  13385910 cttacccaaaattaaaggaaagacggggatctccagaggcttgtcaggtacaccaaccattacaagttttccatgagacttcagtaatccaagtagtggc 13385811  T
Q  136 aagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacccatcgcagcctataaaatcatcgacat--tta-ttaattaatcaattacc 232  Q
    |||| ||||||||  |||||||| ||||| ||||| ||||||||||||||||  |||| |||||||| |||  ||||  ||| || || |||  |||| |    
T  13385810 aagacaggatgatttgctgaaacggtatcaatgataccatccaaagtacccagtgcagactataaaaacattaacataattatttcatgaattgattagc 13385711  T
Q  233 atttccaattatgaatattattctaactttgattatgtatt--tgtacctgcattttatcttggtcatgacttataagaaatgaatcagctcctaggttt 330  Q
    |||  ||||| ||| ||| ||   |  ||  | ||| | ||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |    
T  13385710 attgtcaatt-tgagtataatagaatattgaactatttttttttgtacctgcattttatcttggtcacgacttatcagaaatgaatcagctcctaagtgt 13385612  T
Q  331 tctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagcccaccaa 430  Q
    ||| ||||||| || |||||| | |  ||||||||||| || || ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13385611 tcttttgcttccttttctttgctagcagatgtactaattacggtcacattagcaccaaaagctttggcaaatttcacagccatgtgaccaagcccaccaa 13385512  T
Q  431 gaccaacaacacctatacgaagaccaggtttatcgagtccataatatctaagag 484  Q
    ||||||||||||| | | ||||||||||||| ||||||||| | ||||||||||    
T  13385511 gaccaacaacaccgacatgaagaccaggtttgtcgagtccaaagtatctaagag 13385458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 484
Target Start/End: Original strand, 13412939 - 13413123
Alignment:
Q  300 acttataagaaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggca 399  Q
    |||||| ||||||||||||||||||| || |||||||||||| || |||||||| || ||||||||||| || || ||| | ||||| || |||||||||    
T  13412939 acttatcagaaatgaatcagctcctaagtgttctattgcttccttttctttgttaggcgatgtactaattacggtaacattagcaccgaaagctttggca 13413038  T
Q  400 aatttcacagccatgtgaccaagcccaccaagaccaacaacacctatacgaagaccaggtttatcgagtccataatatctaagag 484  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||| | | |||||| |||||||||||| || ||| |||||    
T  13413039 aatttcacagccatatggccaagtccaccaagaccaacaacacctatatgtaaaccaggcttatcgagtccaaaaaatcgaagag 13413123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 13389700 - 13389570
Alignment:
Q  72 aggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaactgtatcgatgatg 171  Q
    ||||||||||||| |||| ||||||||||||||||| ||| | || ||||| |||| ||| ||||||| ||||||||  ||||||||||||||||||||     
T  13389700 aggcttgtcaggtacaccaaccattacaagttttccatgagacttcaataatccaattaggggtaagataggatgatttgctgaaactgtatcgatgata 13389601  T
Q  172 ccatccaaagtacccatcgcagcctataaaa 202  Q
    ||||||||||||||||  |||| ||||||||    
T  13389600 ccatccaaagtacccaatgcagactataaaa 13389570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 307 - 447
Target Start/End: Original strand, 13426182 - 13426322
Alignment:
Q  307 agaaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttca 406  Q
    ||||| || ||||||||||  | |||||| ||||| || |||||| | || ||||||||||| ||||||||| | |||||||| |||||||| |||||||    
T  13426182 agaaacgagtcagctcctaaatgttctatcgcttccttttctttgctaggcgatgtactaattactgttacattagcaccaaaagctttggcgaatttca 13426281  T
Q  407 cagccatgtgaccaagcccaccaagaccaacaacacctata 447  Q
    ||||||| |||||||| ||||||||||||||||| ||||||    
T  13426282 cagccatatgaccaagtccaccaagaccaacaacgcctata 13426322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 447
Target Start/End: Original strand, 13419291 - 13419431
Alignment:
Q  307 agaaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttca 406  Q
    ||||| || |||||||| | || |||||||||||| || |||||||  || ||||||||||| || || ||| | ||||| || ||||| ||||||||||    
T  13419291 agaaacgagtcagctcccaagtgttctattgcttccttttctttgtgaggcgatgtactaattacggtcacattagcaccgaaagcttttgcaaatttca 13419390  T
Q  407 cagccatgtgaccaagcccaccaagaccaacaacacctata 447  Q
    ||||||| || ||||| ||||||||||||||||||||||||    
T  13419391 cagccatatggccaagtccaccaagaccaacaacacctata 13419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 13453453 - 13453579
Alignment:
Q  71 gaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaactgtatcgatgat 170  Q
    ||||||| ||||||||||| ||||||||||| ||||| ||| | || | ||||||||  |||||||| || |||||||||||||||||||| ||||| ||    
T  13453453 gaggcttttcaggtgcaccaaccattacaagctttccatgagacttgagtaaaccaatcagaggtaatagcggatgatccgctgaaactgtgtcgataat 13453552  T
Q  171 gccatccaaagtacccatcgcagccta 197  Q
     |||||||||||| || | ||||||||    
T  13453553 accatccaaagtagccgttgcagccta 13453579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 309 - 443
Target Start/End: Original strand, 13373035 - 13373169
Alignment:
Q  309 aaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcaca 408  Q
    |||||| |||||||||| || ||| || ||||| |||| |||||| || || || || |||||||||||| | |||||||| ||||||| ||||||||||    
T  13373035 aaatgagtcagctcctaagtgttcaatggcttccttctttttgttaggagaagtgcttatcactgttacattagcaccaaaagctttggtaaatttcaca 13373134  T
Q  409 gccatgtgaccaagcccaccaagaccaacaacacc 443  Q
    ||||| ||||| |  |||||||||||||| |||||    
T  13373135 gccatatgacctaatccaccaagaccaaccacacc 13373169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 447
Target Start/End: Original strand, 13453789 - 13453935
Alignment:
Q  301 cttataagaaatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaa 400  Q
    ||||| |||||||| || |||| || || ||||| |||||| || || || || |||||||||||||| || || ||| | ||||| || |||||||| |    
T  13453789 cttattagaaatgagtccgctcgtaagtgttctaatgcttccttttcctttttaggtgatgtactaattacggtcacattagcaccgaaagctttggcga 13453888  T
Q  401 atttcacagccatgtgaccaagcccaccaagaccaacaacacctata 447  Q
    ||||||| ||||| || ||||| ||||||||||||||||||||||||    
T  13453889 atttcacggccatatggccaagtccaccaagaccaacaacacctata 13453935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 484
Target Start/End: Original strand, 13446854 - 13447019
Alignment:
Q  319 gctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgac 418  Q
    ||||||| || |||||||||||| || || || || || || |||||||| || || ||  | |||||||| ||||| ||||||||||||||||| ||||    
T  13446854 gctcctaagtgttctattgcttccttttcctttttaggcgacgtactaattacggtcactttagcaccaaaagctttagcaaatttcacagccatatgac 13446953  T
Q  419 caagcccaccaagaccaacaacacctatacgaagaccaggtttatcgagtccataatatctaagag 484  Q
    |||| ||||||||||||||||| ||||||   | |||||| || ||||||||| ||| || |||||    
T  13446954 caagtccaccaagaccaacaactcctatattcataccaggcttgtcgagtccaaaatgtcgaagag 13447019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 13378832 - 13378983
Alignment:
Q  310 aatgaatcagctcctaggttttctattgcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacag 409  Q
    ||||| |||||||||| |  ||| || ||||| |||| |||||| || || ||||| | ||| |||||  |  ||||||| |||||||| || |||||||    
T  13378832 aatgagtcagctcctaagcgttcaatggcttccttctttttgttaggagaagtacttaccacagttaccttaacaccaaaggctttggcgaacttcacag 13378931  T
Q  410 ccatgtgaccaagcccaccaagaccaacaacacctatacgaagaccaggttt 461  Q
    |||| ||||| |  |||||||||||||| ||||||||| | || ||||||||    
T  13378932 ccatatgacctaatccaccaagaccaaccacacctatatgcagtccaggttt 13378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 13425953 - 13426065
Alignment:
Q  86 caccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacc 185  Q
    |||| ||||||||||||||||| | | |||| ||||||||||  |  ||||||| |||||||   || ||||| || ||||| || |||| |||||||||    
T  13425953 caccaaccattacaagttttccattagatttcaataaaccaatcaatggtaagataggatgacttgccgaaacagtgtcgataataccattcaaagtacc 13426052  T
Q  186 catcgcagcctat 198  Q
    ||| |||||||||    
T  13426053 cattgcagcctat 13426065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 13419063 - 13419180
Alignment:
Q  86 caccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacc 185  Q
    |||| ||||||||||||||||| | | |||| |||||| |||| |  ||||| | |||||| | ||| |||||||| || || || |||| |||||||||    
T  13419063 caccaaccattacaagttttccattagatttcaataaagcaaccaatggtaaaataggatggttcgccgaaactgtgtcaataataccattcaaagtacc 13419162  T
Q  186 catcgcagcctataaaat 203  Q
    ||| |||| |||| ||||    
T  13419163 cattgcagtctatgaaat 13419180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 13412762 - 13412814
Alignment:
Q  133 ggtaagagaggatgatccgctgaaactgtatcgatgatgccatccaaagtacc 185  Q
    ||||||||||||||| | ||||||||||| || || || ||||||||||||||    
T  13412762 ggtaagagaggatgaacagctgaaactgtgtcaataataccatccaaagtacc 13412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 60 - 484
Target Start/End: Original strand, 47600857 - 47601290
Alignment:
Q  60 agggagctccggaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaact 159  Q
    |||||||||| |||||||  | || ||||| ||||||||||||||||| ||| | || | ||| |||| ||||||| |||||||||| || |||||||||    
T  47600857 agggagctccagaggcttcgctggagcaccaaccattacaagttttccatgagacttcagtaatccaattagaggtgagagaggatgttcagctgaaact 47600956  T
Q  160 gtatcgatgatgccatccaaagtacccatcgcagcctataaaatcatcg---acat---ttattaattaatca---attaccatttccaatt-atgaata 249  Q
    || || ||||| ||||||||||||  ||  ||||||||||| || ||     ||||   || ||||||| | |   |||||||||||||||| | |||||    
T  47600957 gtgtcaatgataccatccaaagtattcactgcagcctataatattattattaacatagtttgttaattactaattgattaccatttccaatttaagaata 47601056  T
Q  250 ttattctaactttgattat-gtatttgtacctgcattttatcttggtcatgacttataagaaatgaatcagctcctaggttttctattgcttctttctct 348  Q
    |||   |   ||| | ||| |||||| ||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |  |||| |||||||||| |||    
T  47601057 ttagaatg--tttaactattgtatttatacttgcatcttatcttggtcacgacttatcaaaaatgagtcagctcctaagcattctcttgcttctttttct 47601154  T
Q  349 ttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagcccaccaagaccaacaacacctatac 448  Q
    ||||| |||||||||||||| || || ||| | || ||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||     
T  47601155 ttgttaggtgatgtactaattacagtcacattagccccaaaagctttagcaaacttaacagccatgtgaccaagtccaccaagaccaacaacacctatat 47601254  T
Q  449 gaagaccaggtttatcgagtccataatatctaagag 484  Q
    | | ||||||||||||||||||| |||||| |||||    
T  47601255 gcataccaggtttatcgagtccaaaatatcgaagag 47601290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 28430809 - 28430701
Alignment:
Q  337 gcttctttctctttgttgggtgatgtactaatcactgttacaatcgcaccaaatgctttggcaaatttcacagccatgtgaccaagcccaccaagaccaa 436  Q
    ||||| |||| |||||| || || || ||||||||||||||  | |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  28430809 gcttccttctttttgttaggagaagtgctaatcactgttaccttagcaccaaaagctttggcaaatttcacagccatatgaccaagtccaccaagaccaa 28430710  T
Q  437 caacaccta 445  Q
    | |||||||    
T  28430709 ccacaccta 28430701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 28431283 - 28431150
Alignment:
Q  64 agctccggaggcttgtcaggtgcaccgaccattacaagttttccgtgatattttaataaaccaactagaggtaagagaggatgatccgctgaaactgtat 163  Q
    |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| |||| || | |||||  | |||||| | ||||||  | || |||||||| |    
T  28431283 agctccagaggcttctcaggtgcaccaaccataacaagttttccatgagatttcaaaagaccaatcaaaggtaacaaaggatggacggcagaaactgtgt 28431184  T
Q  164 cgatgatgccatccaaagtacccatcgcagccta 197  Q
    | ||||| |||||||| || ||| | ||||||||    
T  28431183 caatgataccatccaaggtgcccgttgcagccta 28431150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 8354168 - 8354109
Alignment:
Q  384 accaaatgctttggcaaatttcacagccatgtgaccaagcccaccaagaccaacaacacc 443  Q
    ||||||||||||  ||||||| ||||||||||||||||| || || | ||||||||||||    
T  8354168 accaaatgctttaccaaattttacagccatgtgaccaagtcctcccaaaccaacaacacc 8354109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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