View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6896_low_5 (Length: 268)

Name: NF6896_low_5
Description: NF6896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6896_low_5
NF6896_low_5
[»] chr8 (48 HSPs)
chr8 (113-255)||(22781890-22782032)
chr8 (113-243)||(2339298-2339428)
chr8 (113-239)||(33642466-33642592)
chr8 (113-256)||(29563666-29563809)
chr8 (113-256)||(34028391-34028534)
chr8 (104-243)||(41569106-41569245)
chr8 (113-256)||(2229067-2229210)
chr8 (116-243)||(25847978-25848105)
chr8 (112-243)||(27793204-27793335)
chr8 (120-243)||(42189818-42189941)
chr8 (133-256)||(43135072-43135195)
chr8 (133-255)||(8242251-8242373)
chr8 (113-243)||(37564641-37564771)
chr8 (133-254)||(30923920-30924041)
chr8 (133-242)||(40465249-40465358)
chr8 (103-243)||(11293197-11293337)
chr8 (113-242)||(43295074-43295202)
chr8 (116-243)||(32159044-32159171)
chr8 (113-239)||(12270070-12270196)
chr8 (113-243)||(41915602-41915732)
chr8 (119-255)||(25878170-25878305)
chr8 (116-243)||(34157671-34157799)
chr8 (116-243)||(7668202-7668329)
chr8 (111-256)||(3799713-3799859)
chr8 (140-242)||(40834171-40834273)
chr8 (113-243)||(45145877-45146003)
chr8 (113-257)||(42351194-42351338)
chr8 (113-243)||(33837588-33837719)
chr8 (115-254)||(29916537-29916676)
chr8 (153-254)||(16928840-16928941)
chr8 (113-243)||(36366033-36366162)
chr8 (198-254)||(10839762-10839818)
chr8 (133-256)||(35011209-35011331)
chr8 (111-168)||(32159040-32159097)
chr8 (198-242)||(8453687-8453731)
chr8 (135-170)||(6197905-6197940)
chr8 (102-169)||(6354731-6354798)
chr8 (113-168)||(41915679-41915734)
chr8 (113-243)||(35149676-35149806)
chr8 (113-167)||(45145951-45146005)
chr8 (111-168)||(11293193-11293250)
chr8 (113-170)||(25848050-25848107)
chr8 (113-173)||(7693113-7693173)
chr8 (104-168)||(24915254-24915318)
chr8 (104-168)||(29563743-29563807)
chr8 (104-168)||(30923920-30923984)
chr8 (116-168)||(40465249-40465301)
chr8 (104-168)||(43135129-43135193)
[»] chr1 (42 HSPs)
chr1 (104-243)||(28359081-28359220)
chr1 (113-243)||(2352317-2352447)
chr1 (113-243)||(14281598-14281728)
chr1 (114-243)||(2961114-2961243)
chr1 (102-239)||(28989269-28989406)
chr1 (114-254)||(10380389-10380529)
chr1 (116-243)||(10065265-10065392)
chr1 (104-255)||(29312438-29312589)
chr1 (113-239)||(45536177-45536303)
chr1 (104-243)||(9548671-9548810)
chr1 (113-243)||(9301929-9302059)
chr1 (113-243)||(38830491-38830621)
chr1 (133-254)||(26545025-26545146)
chr1 (116-240)||(24594932-24595055)
chr1 (120-243)||(6784674-6784797)
chr1 (113-223)||(23398088-23398198)
chr1 (133-255)||(26550285-26550407)
chr1 (119-243)||(33325347-33325471)
chr1 (116-243)||(1673982-1674109)
chr1 (119-239)||(40161187-40161307)
chr1 (113-243)||(26733793-26733923)
chr1 (104-242)||(30264785-30264923)
chr1 (104-243)||(7796100-7796239)
chr1 (140-239)||(15289808-15289907)
chr1 (113-202)||(34718899-34718988)
chr1 (116-193)||(23537381-23537458)
chr1 (116-239)||(46320171-46320286)
chr1 (140-227)||(24463324-24463411)
chr1 (93-243)||(43929334-43929483)
chr1 (113-243)||(49944843-49944973)
chr1 (198-256)||(50155391-50155449)
chr1 (104-168)||(10380389-10380453)
chr1 (198-254)||(29256691-29256747)
chr1 (111-170)||(1673978-1674037)
chr1 (113-168)||(9301927-9301982)
chr1 (113-168)||(33325418-33325473)
chr1 (111-254)||(38040282-38040425)
chr1 (113-239)||(44939074-44939200)
chr1 (104-168)||(25021316-25021380)
chr1 (112-168)||(27422992-27423048)
chr1 (113-236)||(29892149-29892270)
chr1 (198-242)||(34146897-34146941)
[»] chr6 (28 HSPs)
chr6 (113-243)||(390815-390945)
chr6 (113-255)||(766425-766567)
chr6 (111-256)||(7405450-7405595)
chr6 (116-243)||(885612-885739)
chr6 (113-256)||(24949628-24949771)
chr6 (113-256)||(31971027-31971170)
chr6 (104-240)||(6801564-6801700)
chr6 (113-243)||(6047806-6047936)
chr6 (111-256)||(33859496-33859641)
chr6 (116-227)||(17225269-17225380)
chr6 (111-254)||(34639039-34639182)
chr6 (113-243)||(6045691-6045821)
chr6 (97-255)||(8558912-8559069)
chr6 (115-240)||(30686554-30686679)
chr6 (118-242)||(13144220-13144344)
chr6 (113-223)||(14931266-14931371)
chr6 (113-200)||(22898861-22898948)
chr6 (140-218)||(36351-36429)
chr6 (113-199)||(22880926-22881012)
chr6 (115-173)||(1158325-1158383)
chr6 (113-243)||(2810089-2810218)
chr6 (111-255)||(5483867-5484011)
chr6 (115-243)||(28630763-28630891)
chr6 (113-168)||(24949639-24949694)
chr6 (138-243)||(1158278-1158383)
chr6 (115-168)||(8558924-8558977)
chr6 (163-236)||(28863337-28863410)
chr6 (113-173)||(2943322-2943382)
[»] scaffold0002 (1 HSPs)
scaffold0002 (115-243)||(492315-492443)
[»] chr2 (52 HSPs)
chr2 (115-243)||(42263480-42263608)
chr2 (113-256)||(29866090-29866233)
chr2 (113-256)||(13775719-13775862)
chr2 (104-240)||(32880906-32881042)
chr2 (115-239)||(43657939-43658063)
chr2 (116-243)||(32197387-32197514)
chr2 (113-243)||(16241277-16241407)
chr2 (113-255)||(41260033-41260175)
chr2 (113-254)||(20427009-20427150)
chr2 (113-242)||(25891955-25892084)
chr2 (113-242)||(40430677-40430806)
chr2 (113-243)||(6761473-6761603)
chr2 (114-256)||(7765791-7765933)
chr2 (113-242)||(2100025-2100154)
chr2 (118-239)||(11363012-11363133)
chr2 (118-244)||(45065589-45065715)
chr2 (136-257)||(32750338-32750459)
chr2 (119-255)||(1944532-1944668)
chr2 (133-256)||(42341646-42341769)
chr2 (113-256)||(44737280-44737422)
chr2 (113-223)||(11711354-11711464)
chr2 (118-240)||(3264935-3265053)
chr2 (113-254)||(38598464-38598605)
chr2 (115-243)||(18452579-18452706)
chr2 (113-239)||(4740718-4740844)
chr2 (114-239)||(41205504-41205629)
chr2 (119-211)||(30864717-30864809)
chr2 (142-242)||(33913188-33913288)
chr2 (176-240)||(20360515-20360579)
chr2 (104-173)||(39377911-39377980)
chr2 (113-173)||(39377844-39377904)
chr2 (182-242)||(42470922-42470982)
chr2 (140-223)||(22857834-22857917)
chr2 (104-218)||(3037758-3037874)
chr2 (150-243)||(20555268-20555361)
chr2 (114-219)||(44736813-44736918)
chr2 (113-249)||(38983007-38983143)
chr2 (113-256)||(4063269-4063411)
chr2 (114-173)||(12486072-12486131)
chr2 (113-223)||(9152387-9152497)
chr2 (204-254)||(34447602-34447652)
chr2 (113-259)||(45034392-45034537)
chr2 (123-218)||(22857822-22857917)
chr2 (138-173)||(27596729-27596764)
chr2 (119-173)||(27182089-27182143)
chr2 (119-173)||(27831631-27831685)
chr2 (103-173)||(38598536-38598606)
chr2 (198-256)||(41205583-41205641)
chr2 (198-251)||(28249026-28249079)
chr2 (104-168)||(11711323-11711387)
chr2 (198-242)||(41153204-41153248)
chr2 (104-168)||(42341703-42341767)
[»] scaffold0123 (1 HSPs)
scaffold0123 (113-243)||(29252-29382)
[»] chr4 (62 HSPs)
chr4 (113-258)||(36099495-36099640)
chr4 (104-243)||(31227270-31227409)
chr4 (113-256)||(23125654-23125797)
chr4 (113-243)||(5970289-5970419)
chr4 (113-243)||(31854389-31854519)
chr4 (113-239)||(38687925-38688051)
chr4 (115-243)||(19485582-19485710)
chr4 (115-242)||(47948949-47949076)
chr4 (113-243)||(39877411-39877541)
chr4 (111-256)||(18430250-18430397)
chr4 (116-256)||(55292109-55292249)
chr4 (114-241)||(2279533-2279660)
chr4 (113-256)||(4758774-4758917)
chr4 (113-243)||(35328947-35329077)
chr4 (114-243)||(2385205-2385334)
chr4 (113-243)||(53621338-53621468)
chr4 (113-254)||(18135310-18135453)
chr4 (115-237)||(2411856-2411978)
chr4 (113-243)||(6246616-6246746)
chr4 (113-242)||(580422-580551)
chr4 (118-239)||(56216247-56216368)
chr4 (115-243)||(21221128-21221255)
chr4 (119-239)||(38046624-38046744)
chr4 (113-240)||(44199985-44200112)
chr4 (14-105)||(22453442-22453535)
chr4 (113-239)||(52535965-52536091)
chr4 (144-256)||(20688455-20688567)
chr4 (119-235)||(21229239-21229355)
chr4 (113-240)||(49122534-49122660)
chr4 (104-216)||(51833011-51833123)
chr4 (104-240)||(53303735-53303871)
chr4 (114-217)||(7350242-7350345)
chr4 (113-223)||(39834282-39834392)
chr4 (113-243)||(3085883-3086012)
chr4 (133-243)||(32517780-32517892)
chr4 (119-256)||(15170880-15171017)
chr4 (152-243)||(29833275-29833366)
chr4 (116-223)||(4698634-4698741)
chr4 (115-186)||(27006515-27006586)
chr4 (116-256)||(4698620-4698760)
chr4 (198-256)||(7350184-7350242)
chr4 (133-239)||(54612002-54612098)
chr4 (113-256)||(30191893-30192036)
chr4 (109-167)||(2643612-2643670)
chr4 (113-211)||(43413584-43413681)
chr4 (111-168)||(31227356-31227413)
chr4 (114-243)||(55190676-55190804)
chr4 (113-173)||(6246688-6246748)
chr4 (198-242)||(21554201-21554245)
chr4 (113-173)||(53225724-53225784)
chr4 (98-173)||(14785009-14785084)
chr4 (133-243)||(3043802-3043911)
chr4 (133-243)||(20745360-20745469)
chr4 (121-219)||(31240876-31240974)
chr4 (113-170)||(29833273-29833330)
chr4 (115-160)||(29834554-29834598)
chr4 (198-243)||(45828508-45828553)
chr4 (115-256)||(48361049-48361190)
chr4 (198-243)||(53225737-53225782)
chr4 (198-254)||(16412233-16412289)
chr4 (104-168)||(31854378-31854442)
chr4 (138-170)||(55466115-55466147)
[»] chr5 (44 HSPs)
chr5 (104-244)||(41989563-41989703)
chr5 (113-256)||(13144888-13145031)
chr5 (113-243)||(31802968-31803098)
chr5 (116-256)||(18353205-18353345)
chr5 (111-256)||(36418982-36419127)
chr5 (94-243)||(37699790-37699939)
chr5 (104-255)||(20578653-20578804)
chr5 (113-256)||(25027702-25027845)
chr5 (113-243)||(7749926-7750056)
chr5 (113-239)||(41046836-41046962)
chr5 (113-242)||(21610312-21610441)
chr5 (104-240)||(15569344-15569480)
chr5 (115-242)||(6338326-6338453)
chr5 (113-243)||(903976-904106)
chr5 (113-243)||(1108291-1108421)
chr5 (113-243)||(9601603-9601733)
chr5 (114-256)||(36417044-36417186)
chr5 (115-256)||(26898201-26898342)
chr5 (92-242)||(16089097-16089249)
chr5 (116-256)||(29374181-29374321)
chr5 (113-218)||(7945845-7945950)
chr5 (136-256)||(23411196-23411316)
chr5 (104-243)||(2959249-2959388)
chr5 (104-243)||(2967718-2967857)
chr5 (113-256)||(7053656-7053798)
chr5 (116-243)||(41815196-41815323)
chr5 (113-256)||(1643352-1643495)
chr5 (140-242)||(2825895-2825997)
chr5 (116-243)||(42311820-42311947)
chr5 (133-243)||(21090386-21090496)
chr5 (119-227)||(6910726-6910834)
chr5 (114-218)||(14338824-14338928)
chr5 (104-220)||(38393788-38393904)
chr5 (114-243)||(15968321-15968449)
chr5 (113-239)||(1138226-1138351)
chr5 (113-243)||(22731267-22731396)
chr5 (113-243)||(27488357-27488486)
chr5 (113-170)||(42311818-42311875)
chr5 (113-168)||(21090384-21090439)
chr5 (140-169)||(7272241-7272270)
chr5 (111-168)||(7750003-7750060)
chr5 (116-168)||(2825945-2825997)
chr5 (203-243)||(29299367-29299407)
chr5 (198-242)||(38394439-38394483)
[»] chr3 (58 HSPs)
chr3 (113-243)||(14768106-14768236)
chr3 (113-255)||(18765256-18765398)
chr3 (113-242)||(335386-335515)
chr3 (113-256)||(42605824-42605967)
chr3 (113-243)||(9465081-9465211)
chr3 (113-243)||(19202260-19202390)
chr3 (113-243)||(25846521-25846651)
chr3 (133-243)||(40464550-40464660)
chr3 (113-243)||(49122952-49123082)
chr3 (113-254)||(25113348-25113489)
chr3 (115-243)||(21653354-21653482)
chr3 (113-256)||(26999029-26999172)
chr3 (113-243)||(6086911-6087041)
chr3 (98-243)||(9440138-9440283)
chr3 (115-232)||(52114045-52114162)
chr3 (116-239)||(23825160-23825283)
chr3 (113-244)||(29019743-29019874)
chr3 (116-243)||(47449927-47450054)
chr3 (113-243)||(10049676-10049806)
chr3 (104-242)||(9190027-9190165)
chr3 (111-243)||(28564945-28565077)
chr3 (116-256)||(51698111-51698251)
chr3 (113-256)||(8243679-8243822)
chr3 (113-243)||(28945664-28945794)
chr3 (113-243)||(40214910-40215040)
chr3 (113-243)||(379078-379211)
chr3 (113-243)||(42225572-42225702)
chr3 (113-254)||(13826120-13826261)
chr3 (135-243)||(1122305-1122413)
chr3 (118-239)||(44593215-44593336)
chr3 (104-254)||(22003794-22003945)
chr3 (104-254)||(22011311-22011462)
chr3 (136-218)||(8825762-8825844)
chr3 (104-197)||(40141930-40142023)
chr3 (116-243)||(39341382-39341512)
chr3 (161-243)||(26123046-26123128)
chr3 (115-237)||(3484342-3484460)
chr3 (152-217)||(42841635-42841700)
chr3 (133-218)||(55139201-55139286)
chr3 (134-199)||(16660334-16660401)
chr3 (138-220)||(8987762-8987844)
chr3 (102-220)||(22003829-22003947)
chr3 (102-220)||(22011346-22011464)
chr3 (113-243)||(28406475-28406605)
chr3 (113-218)||(48593177-48593282)
chr3 (104-256)||(8243681-8243833)
chr3 (111-242)||(54537454-54537585)
chr3 (122-170)||(19880869-19880917)
chr3 (198-242)||(43448969-43449013)
chr3 (198-242)||(51723389-51723433)
chr3 (113-168)||(10049753-10049808)
chr3 (198-256)||(21662883-21662941)
chr3 (113-167)||(28406553-28406607)
chr3 (113-243)||(53441915-53442045)
chr3 (111-168)||(1122360-1122417)
chr3 (115-168)||(29019820-29019873)
chr3 (115-240)||(29457850-29457974)
chr3 (156-240)||(49885392-49885475)
[»] chr7 (41 HSPs)
chr7 (97-243)||(5347733-5347878)
chr7 (113-243)||(23248678-23248808)
chr7 (111-256)||(12763235-12763380)
chr7 (95-242)||(3411322-3411469)
chr7 (113-256)||(30866253-30866396)
chr7 (133-243)||(29770350-29770460)
chr7 (113-254)||(7463457-7463599)
chr7 (119-240)||(32050093-32050214)
chr7 (120-255)||(19979491-19979627)
chr7 (119-243)||(34281679-34281803)
chr7 (104-243)||(5909481-5909620)
chr7 (104-239)||(12426544-12426679)
chr7 (113-243)||(20397823-20397953)
chr7 (113-243)||(35427669-35427799)
chr7 (116-243)||(10599325-10599453)
chr7 (113-256)||(7107638-7107781)
chr7 (114-242)||(46680840-46680968)
chr7 (135-243)||(12085034-12085142)
chr7 (113-217)||(15074630-15074729)
chr7 (104-243)||(6173938-6174072)
chr7 (97-239)||(17351486-17351627)
chr7 (116-243)||(26563932-26564059)
chr7 (118-226)||(46449805-46449913)
chr7 (113-255)||(4826760-4826901)
chr7 (138-243)||(8566114-8566219)
chr7 (182-239)||(36655436-36655493)
chr7 (104-244)||(18672102-18672241)
chr7 (113-168)||(7107715-7107770)
chr7 (156-243)||(10007627-10007714)
chr7 (116-223)||(22055760-22055867)
chr7 (115-218)||(26563956-26564059)
chr7 (198-256)||(29365714-29365772)
chr7 (113-243)||(36245384-36245514)
chr7 (198-243)||(2523863-2523908)
chr7 (104-169)||(12085023-12085088)
chr7 (113-170)||(23248676-23248733)
chr7 (198-239)||(23870993-23871034)
chr7 (113-242)||(28677325-28677454)
chr7 (198-239)||(41850610-41850651)
chr7 (155-227)||(32903572-32903644)
chr7 (138-170)||(46449811-46449843)
[»] scaffold2107 (2 HSPs)
scaffold2107 (115-256)||(453-594)
scaffold2107 (113-168)||(528-583)
[»] scaffold0144 (1 HSPs)
scaffold0144 (113-256)||(38833-38976)
[»] scaffold0221 (1 HSPs)
scaffold0221 (113-243)||(11038-11168)
[»] scaffold0246 (1 HSPs)
scaffold0246 (115-243)||(15165-15292)
[»] scaffold0024 (1 HSPs)
scaffold0024 (113-243)||(35962-36092)
[»] scaffold0592 (1 HSPs)
scaffold0592 (133-242)||(407-516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (140-243)||(77355-77458)
[»] scaffold0009 (1 HSPs)
scaffold0009 (119-243)||(3641-3774)
[»] scaffold0067 (1 HSPs)
scaffold0067 (118-240)||(5229-5351)
[»] scaffold0018 (1 HSPs)
scaffold0018 (119-217)||(183828-183926)
[»] scaffold0005 (1 HSPs)
scaffold0005 (98-173)||(54646-54721)
[»] scaffold0242 (1 HSPs)
scaffold0242 (198-255)||(16505-16562)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 22781890 - 22782032
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22781890 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 22781989  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
     |||||||||||||| |||||||||||||||  ||||||||||    
T  22781990 caaaaaatcaactttctcttataaataggaccggaggaagtat 22782032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 2339298 - 2339428
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2339298 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2339397  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  2339398 taaaaagtcaactttctcttgtaaataggac 2339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 33642466 - 33642592
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  33642466 cggtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 33642565  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    ||||||||||||||| |||| ||||||    
T  33642566 taaaaaatcaactttctcttgtaaata 33642592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 29563666 - 29563809
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  29563666 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattgaatgtatc 29563765  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||||| |||| ||||||||||  |||||||||||    
T  29563766 taaaaagtcaactttctcttgtaaataggaccggaggaagtatt 29563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 34028391 - 34028534
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34028391 cggtcctatttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 34028490  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||  |||||||| |||| ||||||||||  |||| ||||||    
T  34028491 taaaaggtcaactttctcttgtaaataggaccggagggagtatt 34028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 41569245 - 41569106
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||||| || |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  41569245 tacttcatccgatcctatttacaagaaacaatttactttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattatt 41569146  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||| ||||||||||||||||||| |||| ||||||||||    
T  41569145 caatatatctaaaaaatcaactttctcttgtaaataggac 41569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 2229210 - 2229067
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  2229210 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgtatc 2229111  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  2229110 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 2229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 25847978 - 25848105
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  25847978 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaa 25848077  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||||| | |||| ||||||||||    
T  25848078 aaagtcaactgtctcttgtaaataggac 25848105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 27793204 - 27793335
Alignment:
Q  112 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 211  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||| ||| |||    
T  27793204 tcggtcctatttacaagagataatttactttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacattattgaatatat 27793303  T
Q  212 ctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||| |||||||| |||| ||||||||||    
T  27793304 ctaaaaagtcaactttctcttgtaaataggac 27793335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 42189818 - 42189941
Alignment:
Q  120 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 219  Q
    ||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  42189818 atttacaagagacaatttactttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaag 42189917  T
Q  220 tcaactttatcttataaataggac 243  Q
    ||||||||||| ||||||||||||    
T  42189918 tcaactttatcatataaataggac 42189941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 43135072 - 43135195
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||    
T  43135072 aatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctctt 43135171  T
Q  233 ataaataggactagaggaagtatt 256  Q
     ||||||||||  |||||||||||    
T  43135172 gtaaataggaccggaggaagtatt 43135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 133 - 255
Target Start/End: Original strand, 8242251 - 8242373
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||    
T  8242251 aatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaaatttctttt 8242350  T
Q  233 ataaataggactagaggaagtat 255  Q
    ||||||||||||||||| |||||    
T  8242351 ataaataggactagagggagtat 8242373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 37564771 - 37564641
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||     
T  37564771 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattcaatgtatt 37564672  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||||||||||||||    
T  37564671 taaaaagtcaactttctcttataaataggac 37564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 30924041 - 30923920
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||| | ||||    
T  30924041 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaagtcaactgtctctt 30923942  T
Q  233 ataaataggactagaggaagta 254  Q
     ||||||||||  |||||||||    
T  30923941 gtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 40465358 - 40465249
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||    
T  40465358 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctctt 40465259  T
Q  233 ataaatagga 242  Q
     |||||||||    
T  40465258 gtaaatagga 40465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 11293337 - 11293197
Alignment:
Q  103 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 202  Q
    ||||||| | |||||||||||||||||   ||||||||||||| ||||||||||| |||||||||  |||| |||||||||||||||||| |||||||||    
T  11293337 ttacttcctccggtcctatttacaagagacaatttactttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattat 11293238  T
Q  203 tcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  11293237 tcaatgtatctaaaaagtcaactttctcttgtaaataggac 11293197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 43295202 - 43295074
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||| ||  |||  |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43295202 cggtcctatttacaaaaacaaata-actttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 43295104  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| | |||||| ||||||||||||||    
T  43295103 taaaaagttaactttctcttataaatagga 43295074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 32159171 - 32159044
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||| |||||||||||    
T  32159171 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattatttaatgtatctaa 32159072  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||| ||| |||| ||||||||||    
T  32159071 aaagtcaaatttctcttgtaaataggac 32159044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 12270196 - 12270070
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||| ||||||| |||||||    
T  12270196 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattcgatgtatc 12270097  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    |||||| |||||||| |||| ||||||    
T  12270096 taaaaagtcaactttctcttgtaaata 12270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 41915602 - 41915732
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  41915602 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattcaatgtatc 41915701  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||| ||||||||||    
T  41915702 taaaaagtcaattttctcttgtaaataggac 41915732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 25878305 - 25878170
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||    
T  25878305 tatttacaagaaacaatttactttt-agatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaatgtatttaaaaa 25878207  T
Q  219 atcaactttatcttataaataggactagaggaagtat 255  Q
     |||| ||| |||||||||||||||| |||| |||||    
T  25878206 gtcaattttctcttataaataggactggagggagtat 25878170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 34157671 - 34157799
Alignment:
Q  116 tcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| |    
T  34157671 tcctatttacaagagataatttacttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcgatgtatcca 34157770  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    |||| |||| ||| |||| ||||||||||    
T  34157771 aaaattcaaatttctcttgtaaataggac 34157799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 7668202 - 7668329
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||    
T  7668202 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatttaa 7668301  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    |||  ||| ||| |||| ||||||||||    
T  7668302 aaagacaattttctcttgtaaataggac 7668329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 3799859 - 3799713
Alignment:
Q  111 ttcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgt 209  Q
    ||||||||||||||||| |   |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  3799859 ttcggtcctatttacaatagacaatttacttttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgt 3799760  T
Q  210 atctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||||  | ||||| |||||||||| ||||  |||| ||||||    
T  3799759 atctaaaaagccgactttctcttataaatgggaccggagggagtatt 3799713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 40834171 - 40834273
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  40834171 tttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagacaattttctcttataaata 40834270  T
Q  240 gga 242  Q
    |||    
T  40834271 gga 40834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 45145877 - 45146003
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    || |||||||||||||||||||    
T  45145877 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtttttggtttaggttcttgac----tacatacattattcaatgtatc 45145972  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||| ||||||||||    
T  45145973 taaaaagtcaattttctcttgtaaataggac 45146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 42351338 - 42351194
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||| |||||| ||||||||    
T  42351338 cggtcctatttacaagagacaatttattttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatttaatgtatc 42351239  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtattc 257  Q
    |||||| ||||| || |||| |||||| |||  |||| |||||||    
T  42351238 taaaaagtcaacattctcttgtaaataagaccggagggagtattc 42351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 33837588 - 33837719
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||| ||| ||||||||||||||     
T  33837588 cggttctatttacaagagacaatttactttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattattcaatgtatt 33837687  T
Q  213 t-aaaaaatcaactttatcttataaataggac 243  Q
    | |||||||||||||| |||| ||||||||||    
T  33837688 taaaaaaatcaactttctcttgtaaataggac 33837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 29916537 - 29916676
Alignment:
Q  115 gtcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || | |||| |||||||||||| |    
T  29916537 gtcctatttacaagaaacaatttacttttttagatacattaaataatttatgtatttggtttaagttcttgactaaat-actacaatattcaatgtatat 29916635  T
Q  214 aaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    ||||| ||||  || ||||||||||| ||||||||| ||||    
T  29916636 aaaaagtcaatcttctcttataaataagactagagggagta 29916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 16928941 - 16928840
Alignment:
Q  153 taaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaag 252  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||| |||||||||| |||||||||  ||||| || |||| ||||||||||| |||| ||    
T  16928941 taaataatttatgtatttggtttagattcttgagtagatacataaattattcaatttatctaaaatgtcaacattctcttgtaaataggactggagggag 16928842  T
Q  253 ta 254  Q
    ||    
T  16928841 ta 16928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 36366033 - 36366162
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  36366033 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatc 36366131  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||| |||||| |||||||||||||||    
T  36366132 taaaaaattaactttttcttataaataggac 36366162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 10839818 - 10839762
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||| |||||||||    
T  10839818 attattcaatgaatctaaaaagtcaattttttcttataaataggactggaggaagta 10839762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 35011331 - 35011209
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  35011331 aatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattattgaatgaatctaaaaaattaactttttctt 35011233  T
Q  233 ataaataggactagaggaagtatt 256  Q
    |||||||||||  |||| ||||||    
T  35011232 ataaataggaccggaggtagtatt 35011209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 32159040 - 32159097
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  32159040 ttcggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtat 32159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 8453687 - 8453731
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||    
T  8453687 attactcaatgtatctaaaaaatcaaatttttcttataaatagga 8453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 6197940 - 6197905
Alignment:
Q  135 tttactttttagatacattaaataatttatgtattt 170  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6197940 tttactttttagatacattaaataattaatgtattt 6197905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 6354798 - 6354731
Alignment:
Q  102 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 169  Q
    |||||||||| |  ||||||||| ||||| ||||| | ||||||||| |||| |||||||||||||||    
T  6354798 attacttcatccaatcctatttataagaaataattaattttttagattcattgaataatttatgtatt 6354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 41915734 - 41915679
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  41915734 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 41915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 35149676 - 35149806
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| |||||  | || ||||||| |||  |||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||  ||||  |||    
T  35149676 cggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatc 35149775  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||| |||||||||||||||    
T  35149776 taaaaaatcaactttttcttataaataggac 35149806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 45146005 - 45145951
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| ||||||    
T  45146005 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta 45145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 11293193 - 11293250
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  11293193 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 11293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 25848107 - 25848050
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  25848107 cggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtattt 25848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 7693173 - 7693113
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||| |||||  |||| ||||||||||| |||| | ||||| |||||||||||    
T  7693173 cggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggt 7693113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 24915318 - 24915254
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||| ||| |||||||||||| | |||  |||| ||||||||||| |||||||||||| ||||||    
T  24915318 tactacatccggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgtat 24915254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 29563807 - 29563743
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  29563807 tacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 29563743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 30923920 - 30923984
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 30923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 40465249 - 40465301
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  40465249 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 40465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 43135193 - 43135129
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  43135193 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 43135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 28359220 - 28359081
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  28359220 tacttcatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattatt 28359121  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28359120 caatgtatctaaaaaatcaactttctcttataaataggac 28359081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 2352317 - 2352447
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2352317 cggtcctatttacaagagacaatttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2352416  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  2352417 taaaaagtcaactgtctcttgtaaataggac 2352447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 14281598 - 14281728
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14281598 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 14281697  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  14281698 taaaaagtcaactgtctcttgtaaataggac 14281728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 2961243 - 2961114
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2961243 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2961144  T
Q  214 aaaaaatcaactttatcttataaataggac 243  Q
    ||||| |||||||| |||| ||||||||||    
T  2961143 aaaaagtcaactttctcttgtaaataggac 2961114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 102 - 239
Target Start/End: Original strand, 28989269 - 28989406
Alignment:
Q  102 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 201  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||    
T  28989269 attactcccttcggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacatta 28989368  T
Q  202 ttcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    |||||||||||||| || |||||||| |||| ||||||    
T  28989369 ttcaatgtatctaataagtcaactttctcttgtaaata 28989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 114 - 254
Target Start/End: Complemental strand, 10380529 - 10380389
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  10380529 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 10380430  T
Q  214 aaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    ||||| |||| ||| |||| ||||||||||  |||||||||    
T  10380429 aaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 10065392 - 10065265
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  10065392 tcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgtatctaa 10065293  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    |||||||| ||| |||| ||||||||||    
T  10065292 aaaatcaattttctcttgtaaataggac 10065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 104 - 255
Target Start/End: Original strand, 29312438 - 29312589
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||    
T  29312438 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattatt 29312537  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||||| |||||| |||||||| | || ||||||||||  ||||||||||    
T  29312538 caatgtatttaaaaagtcaactttctgttgtaaataggaccggaggaagtat 29312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 45536303 - 45536177
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  45536303 cggtcctatttacaagagataatttactttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattattgaatgtatc 45536204  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    |||||| |||| ||| |||| ||||||    
T  45536203 taaaaagtcaattttctcttgtaaata 45536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 9548671 - 9548810
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| | ||||| ||    
T  9548671 tacttcctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattctt 9548770  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  9548771 caatgtatctaaaaagtcaattttctcttgtaaataggac 9548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 9302059 - 9301929
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9302059 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatc 9301960  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| | |||| | |||| ||||||||||    
T  9301959 taaaaagttaactgtctcttgtaaataggac 9301929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 38830491 - 38830621
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||     
T  38830491 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatt 38830590  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  38830591 taaaaagtcaactgtctcttgtaaataggac 38830621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 26545025 - 26545146
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26545025 aatttactttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26545124  T
Q  233 ataaataggactagaggaagta 254  Q
     |||||| |||  |||||||||    
T  26545125 gtaaataagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 24595055 - 24594932
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||    
T  24595055 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaatg-atctaa 24594957  T
Q  216 aaaatcaactttatcttataaatag 240  Q
    ||| |||||||||| ||||||||||    
T  24594956 aaagtcaactttattttataaatag 24594932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 6784674 - 6784797
Alignment:
Q  120 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 219  Q
    ||||||| |||  |||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||| ||||||||||||||||||||||||||    
T  6784674 atttacaggaaacaatttactttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaatgtatctaaaaaa 6784773  T
Q  220 tcaactttatcttataaataggac 243  Q
    |||||||| | |||||||||||||    
T  6784774 tcaactttctattataaataggac 6784797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 23398088 - 23398198
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23398088 cggtcctatttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 23398187  T
Q  213 taaaaaatcaa 223  Q
    |||||| ||||    
T  23398188 taaaaagtcaa 23398198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 133 - 255
Target Start/End: Complemental strand, 26550407 - 26550285
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26550407 aatttactttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26550308  T
Q  233 ataaataggactagaggaagtat 255  Q
     |||||||||   ||||||||||    
T  26550307 gtaaataggatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 33325347 - 33325471
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||   |||||| ||||||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||||||||||||||||||    
T  33325347 tatttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaa 33325446  T
Q  219 atcaactttatcttataaataggac 243  Q
     |||||||| |||| ||||||||||    
T  33325447 gtcaactttttcttgtaaataggac 33325471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 1674109 - 1673982
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||||||||     
T  1674109 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatttaatgtatctag 1674010  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||||||| |||| ||||||||||    
T  1674009 aaagtcaactttctcttgtaaataggac 1673982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 40161307 - 40161187
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||||| ||||||    
T  40161307 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaatgtatttaaaaa 40161208  T
Q  219 atcaactttatcttataaata 239  Q
     |||| ||| |||| ||||||    
T  40161207 gtcaattttctcttgtaaata 40161187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 26733793 - 26733923
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||| ||| |||||| | | ||||    
T  26733793 cggtcctatttacaagaaacaattaactttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattatttattttatc 26733892  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    || ||| |||||||| |||||||||||||||    
T  26733893 tataaagtcaactttctcttataaataggac 26733923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 30264923 - 30264785
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | ||||||||||||||| ||  |  |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||| ||||||    
T  30264923 tacttcctccggtcctatttacaataaacatgttactttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattatt 30264824  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    ||||||||| || ||||||||||| |||  |||||||||    
T  30264823 caatgtatccaacaaatcaactttctctcgtaaatagga 30264785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 7796239 - 7796100
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | ||||| ||||||||||    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  7796239 tacttcctccggtcatatttacaagtgacaatttattttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacattatt 7796140  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||  | | ||| |||| ||||||||||    
T  7796139 caatgtatctaaaaagactattttctcttgtaaataggac 7796100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 15289808 - 15289907
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||| || ||||||||||||||||||||||||| |||||||| |||| ||||||    
T  15289808 tttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaatgtatctaaaaagtcaactttctcttgtaaata 15289907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 34718899 - 34718988
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 202  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||||  ||||||||    
T  34718899 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacattat 34718988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 23537458 - 23537381
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 193  Q
    ||||||||||||||   |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  23537458 tcctatttacaagagacaatttattttttagataaattaaataatttatgtatttggtttaggttcttgactaaataa 23537381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 46320286 - 46320171
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||     || ||||||||||| ||| |||||||||   ||||||    
T  46320286 tcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----ttattgactagatacatatattattcaa---atctaa 46320195  T
Q  216 aaaatcaactttatcttataaata 239  Q
    ||| ||||| || |||||||||||    
T  46320194 aaagtcaaccttctcttataaata 46320171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 24463324 - 24463411
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 227  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  | ||| |||||||||| |||| || |||||||||||||||    
T  24463324 tttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattattgaatgaatttaaaaaatcaacttt 24463411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 43929334 - 43929483
Alignment:
Q  93 aaataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagata 192  Q
    ||||||||| ||||| | | ||||||||| || |||||  |||||||||||| ||| ||||||||| || ||||||||||| ||  ||||   |||| ||    
T  43929334 aaataaaaagttactccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtcta-tttctaagctaggta 43929432  T
Q  193 aatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
     ||  |||||| |||| ||||||||| | |||||| |||||||||||||||    
T  43929433 catcaattattgaatgaatctaaaaagttaactttttcttataaataggac 43929483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 49944973 - 49944843
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  | || | ||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||| |||    
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatc 49944874  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| | || ||| |||||||||||||||    
T  49944873 taaaaagttaaatttttcttataaataggac 49944843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 50155391 - 50155449
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||||    
T  50155391 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagtatt 50155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 10380389 - 10380453
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||| | |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtat 10380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 29256691 - 29256747
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||    
T  29256691 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 1673978 - 1674037
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    |||||||||||||||||||   | || ||||| ||||||||||||||||| |||||||||    
T  1673978 ttcggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtattt 1674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 9301927 - 9301982
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  9301927 cggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtat 9301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 33325473 - 33325418
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    ||||||||||||||||||  | || |||||||||||||||| |||||| |||||||    
T  33325473 cggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtat 33325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 254
Target Start/End: Original strand, 38040282 - 38040425
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||| |||||  | || ||||||| ||| ||||  |||| | || |||||| | ||  |||| ||| ||||| ||  |||| |||||| |    
T  38040282 ttcggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaa 38040381  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||||| |||| ||| |||||||||||||||  |||||||||    
T  38040382 tctaaaaagtcaaatttttcttataaataggaccggaggaagta 38040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 44939074 - 44939200
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| |||||  | || |||||||  || ||||  |||| | ||||||||||| ||  |||| || |||||| ||  |||| |||||| |||    
T  44939074 cggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatc 44939173  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    ||||||||||| ||| |||||||||||    
T  44939174 taaaaaatcaattttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 25021380 - 25021316
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||| |||| |||||||||||||  |||| |||||||||||  ||| ||||||| ||||||    
T  25021380 tacttcatccggttctatttacaagaaacaattgactttttagatttattgaataattgatgtat 25021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 27423048 - 27422992
Alignment:
Q  112 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    ||||||| ||||| || ||| |||| |||||||| ||||||| ||||||||||||||    
T  27423048 tcggtcccatttataaaaatcaattgactttttaaatacattgaataatttatgtat 27422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 29892270 - 29892149
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| | |||  |||| ||||||||||| |||| ||||||| || ||| |||| ||| || | |||  |||| ||| |||||||||  ||||    
T  29892270 cggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggtttagattttagaccggatacataaattattcaa--tatc 29892173  T
Q  213 taaaaaatcaactttatcttataa 236  Q
    |||||| |||||| | ||||||||    
T  29892172 taaaaagtcaactgtttcttataa 29892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 34146897 - 34146941
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  34146897 attattcaatgaatcaaaaaaatcaattttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 390945 - 390815
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  390945 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 390846  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||||||||||||| ||||    
T  390845 taaaaaatcaactttatcttataaattggac 390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 766567 - 766425
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  766567 cggtcctatttacaagagataatttattttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattattcaatgtatc 766468  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    ||||||||| ||||| ||||||||||||||   ||||||||||    
T  766467 taaaaaatcgactttctcttataaataggatcggaggaagtat 766425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 111 - 256
Target Start/End: Original strand, 7405450 - 7405595
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7405450 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 7405549  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  7405550 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 7405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 885739 - 885612
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  885739 tcctatttacaagagagaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaa 885640  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||||| | |||| ||||||||||    
T  885639 aaagtcaactgtctcttgtaaataggac 885612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 24949771 - 24949628
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  24949771 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 24949672  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  24949671 taaaaagtcaattttctcttgtaaataggaccggagggagtatt 24949628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 31971170 - 31971027
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31971170 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 31971071  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||||| |||| |||||| |||  |||| ||||||    
T  31971070 taaaaagtcaactttctcttgtaaataagaccggagggagtatt 31971027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 6801700 - 6801564
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  6801700 tacttcatccagtcctatttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattatt 6801601  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatag 240  Q
    ||||||||||||||| | ||| ||||  |||||||||    
T  6801600 caatgtatctaaaaagttaaccttattatataaatag 6801564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 6047936 - 6047806
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  6047936 cggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 6047837  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| | |||||| | || ||||||||||    
T  6047836 taaaaagttaactttctgttgtaaataggac 6047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 111 - 256
Target Start/End: Original strand, 33859496 - 33859641
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||    
T  33859496 ttcggtcctatttacaatagacaatttactttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacattattcgatgta 33859595  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||| | |||||| |||| ||||||||||  |||| ||||||    
T  33859596 tctaaaaagttaactttctcttgtaaataggaccggagggagtatt 33859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 17225380 - 17225269
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17225380 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattcaatgtatctaa 17225281  T
Q  216 aaaatcaacttt 227  Q
    ||| ||||||||    
T  17225280 aaagtcaacttt 17225269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 254
Target Start/End: Complemental strand, 34639182 - 34639039
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||| ||||   ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||  |||||    
T  34639182 ttcggtcctatttataagagacaatttactttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattattgcatgta 34639083  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||||| |||||| | |||| ||||||||||| |||||||||    
T  34639082 tctaaaaagtcaactgtctcttgtaaataggactggaggaagta 34639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 6045821 - 6045691
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||| ||| |||||||||||||||    
T  6045821 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatc 6045722  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||  |||||||| |||||||||||||||    
T  6045721 taaaaggtcaactttctcttataaataggac 6045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 255
Target Start/End: Complemental strand, 8559069 - 8558912
Alignment:
Q  97 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 196  Q
    ||||||||||| | | || || |||||||||||   |||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||    
T  8559069 aaaaaattactccctccgatcttatttacaagagacaatttattttttagatacat-aaataatttatgtatttggtttaggttcttaactagatacata 8558971  T
Q  197 cattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||    
T  8558970 cattattcaatgtatctaaaaagtcaattttctcttgtaaataggactggagggagtat 8558912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 30686554 - 30686679
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||    
T  30686554 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaatgtattta 30686653  T
Q  215 aaaaatcaactttatcttataaatag 240  Q
    |||| |||| ||| |||| |||||||    
T  30686654 aaaagtcaattttctcttgtaaatag 30686679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 13144344 - 13144220
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||  ||  ||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||| ||| |||||||||||||    
T  13144344 ctatttacaagagatagattactttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacataattgaatgtatctaaaa 13144245  T
Q  218 aatcaactttatcttataaatagga 242  Q
    | |||||||||| || |||||||||    
T  13144244 agtcaactttattttgtaaatagga 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 14931266 - 14931371
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||| ||     |||| |||||||||||||||||||    
T  14931266 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattattcaatgtatc 14931360  T
Q  213 taaaaaatcaa 223  Q
    |||||| ||||    
T  14931361 taaaaagtcaa 14931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 22898861 - 22898948
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatt 200  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||| |||||||    
T  22898861 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 36429 - 36351
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||| ||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||| ||||||||||    
T  36429 tttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaatatatctaaaaa 36351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 22880926 - 22881012
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat 199  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| ||||| || |||||||||||||| ||| ||||||    
T  22880926 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 1158383 - 1158325
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||||||| ||||| |||||||| ||||||| ||||||| |||||||||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggt 1158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 2810218 - 2810089
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || ||||| |||||||||||||  || |||| |||| || ||||||||||  ||  |||| |||||| || ||  |||||| |||| |||    
T  2810218 cggtcctatatataagaaataatttacttttttcattcattgaatagttgatgtatttggactat-ttctagactaggtacatcaattattgaatgaatc 2810120  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||| |||||| | |||||||||||||    
T  2810119 taaaaaattaacttttttttataaataggac 2810089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 255
Target Start/End: Original strand, 5483867 - 5484011
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    ||||||||||||||||| || || || |||||||| ||  ||||||||||| |||||||| || ||  || | ||||| ||| ||  ||||||||| | |    
T  5483867 ttcggtcctatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaa 5483966  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||||| |||| | | ||||  ||||||||  |||||||||||    
T  5483967 tctaaaaagtcaattgtttcttgcaaataggagcagaggaagtat 5484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 28630891 - 28630763
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||| |||||  |||| ||||||||||| ||||  |||| ||||||||||||| ||  || | ||| ||||| ||  |||| |||||| ||  |    
T  28630891 gtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaa 28630792  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    |||| |||| ||| |||||||||||||||    
T  28630791 aaaagtcaaatttttcttataaataggac 28630763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 24949639 - 24949694
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  24949639 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 24949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 1158278 - 1158383
Alignment:
Q  138 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 237  Q
    ||||||||||| |||| ||||||| ||||||| ||| ||  |||| ||| | ||| ||  |||||||||||||| |||||| |||| | | |||| ||||    
T  1158278 actttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaa 1158377  T
Q  238 taggac 243  Q
    ||||||    
T  1158378 taggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 8558924 - 8558977
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  8558924 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 8558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 28863410 - 28863337
Alignment:
Q  163 atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataa 236  Q
    ||||||||||| ||  |||| ||| ||||| ||| ||||| ||||| | |||||||||||| ||||||||||||    
T  28863410 atgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaaatcaattttatcttataa 28863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 2943382 - 2943322
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||||||| || |||||  |||||||||||| ||| ||||||||| || |||||||||||    
T  2943382 cggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggt 2943322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 492443 - 492315
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  492443 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 492344  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||| |||||||||||||||    
T  492343 aaaaatcaactttctcttataaataggac 492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 42263608 - 42263480
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  42263608 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 42263509  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||| |||||||||||||||    
T  42263508 aaaaatcaactttctcttataaataggac 42263480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 29866090 - 29866233
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |    
T  29866090 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtacc 29866189  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| ||||||||||||| ||||||||||  |||| ||||||    
T  29866190 taaaaagtcaactttatcttgtaaataggaccggagggagtatt 29866233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 13775719 - 13775862
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||    
T  13775719 cggtcctatttacaagagataatttactttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattatttaatgtatc 13775818  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||||| |||||||||||||||  |||| ||||||    
T  13775819 taaaaagtcaactttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 104 - 240
Target Start/End: Original strand, 32880906 - 32881042
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    ||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  32880906 tacttcattcgatcctatttacaagagacaatttactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 32881005  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatag 240  Q
    |||| |||||||||| ||||||||||||| |||||||    
T  32881006 caatatatctaaaaagtcaactttatcttgtaaatag 32881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 115 - 239
Target Start/End: Complemental strand, 43658063 - 43657939
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  43658063 gtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatcta 43657964  T
Q  215 aaaaatcaactttatcttataaata 239  Q
    |||| |||||||| |||| ||||||    
T  43657963 aaaagtcaactttctcttgtaaata 43657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32197387 - 32197514
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  32197387 tcctatttacatgaaacaatttattttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaa 32197486  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    |||||||||||| |||| ||||||||||    
T  32197487 aaaatcaactttctcttgtaaataggac 32197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 16241407 - 16241277
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16241407 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 16241308  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  16241307 taaaaagtcaactgtctcttgtaaataggac 16241277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 41260033 - 41260175
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  41260033 cggtcctatttacaagagacaatttacttttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 41260132  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||| || ||||| |||| ||||||||||  ||||||||||    
T  41260133 taaaaagtcgactttctcttgtaaataggaccggaggaagtat 41260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 20427009 - 20427150
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  20427009 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 20427108  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||| |||| ||| ||||||||||| ||| ||||| ||||    
T  20427109 taaaaagtcaattttctcttataaataagaccagagggagta 20427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 25892084 - 25891955
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  25892084 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatttatc 25891985  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||||| | ||||||||||||||    
T  25891984 taaaaagtcaactgtctcttataaatagga 25891955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 40430806 - 40430677
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40430806 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 40430707  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||| ||| ||||||||||||||    
T  40430706 taaaaagtcaattttctcttataaatagga 40430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 6761473 - 6761603
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  6761473 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 6761572  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  6761573 taaaaagtcaactgtctcttgtaaataggac 6761603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 7765933 - 7765791
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatct 7765834  T
Q  214 aaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7765833 aaaaagtcaactttctcttgtaaataggaccggagggagtatt 7765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 2100025 - 2100154
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2100025 cggtcctatttacaagagacatgttattttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2100124  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||||||| | ||||||||||||    
T  2100125 taaaaagtcaactttcttttataaatagga 2100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 11363133 - 11363012
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  11363133 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaatgcatctaaaa 11363034  T
Q  218 aatcaactttatcttataaata 239  Q
    | |||||||| |||| ||||||    
T  11363033 agtcaactttctcttgtaaata 11363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 45065715 - 45065589
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||  | ||| |||| ||||||||| ||||||||||||||||||||||||    
T  45065715 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaa 45065616  T
Q  218 aatcaactttatcttataaataggact 244  Q
    | |||||||| | ||||||||||||||    
T  45065615 agtcaactttcttttataaataggact 45065589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 32750459 - 32750338
Alignment:
Q  136 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 235  Q
    ||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||    
T  32750459 ttactttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgta 32750360  T
Q  236 aataggactagaggaagtattc 257  Q
    ||||||||  |||| |||||||    
T  32750359 aataggaccggagggagtattc 32750338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 1944668 - 1944532
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||   || ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1944668 tatttacaagagacaagttactttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 1944569  T
Q  219 atcaactttatcttataaataggactagaggaagtat 255  Q
     |||||||| | || |||||||||  ||||| |||||    
T  1944568 gtcaactttcttttgtaaataggatcagagggagtat 1944532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 42341646 - 42341769
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  42341646 aatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattttctctt 42341745  T
Q  233 ataaataggactagaggaagtatt 256  Q
     ||||||||||  || ||||||||    
T  42341746 gtaaataggaccggatgaagtatt 42341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 44737422 - 44737280
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  44737422 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggt-tagattcttaactagatacatacattattcaatgtatc 44737324  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  44737323 taaaaagtcaattttctcttgtaaataagaccggagggagtatt 44737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 11711464 - 11711354
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||    
T  11711464 cggtcctatttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattcaatgtatc 11711365  T
Q  213 taaaaaatcaa 223  Q
    |||||| ||||    
T  11711364 taaaaagtcaa 11711354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 3264935 - 3265053
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    ||||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  3264935 ctatttacaagagacaatttactttttagatacattaaataatttat----ttggtttaagttcttgactaaatacatacattattcaatgtatctaaaa 3265030  T
Q  218 aatcaactttatcttataaatag 240  Q
    ||||||| |||||||||||||||    
T  3265031 aatcaacattatcttataaatag 3265053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 38598464 - 38598605
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  38598464 cggtcttatttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatgtatc 38598563  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||| | |||||| | || ||||||||||  |||||||||    
T  38598564 taaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 18452579 - 18452706
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| ||    
T  18452579 gtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatatat-ta 18452677  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    |||| |||||| | |||| ||||||||||    
T  18452678 aaaagtcaactgtctcttgtaaataggac 18452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 4740718 - 4740844
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||| |||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||     
T  4740718 cggtcctatttacaagaaacaattaactttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattattcaatgtatt 4740817  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    |||||| | |||||| |||| ||||||    
T  4740818 taaaaagttaactttctcttgtaaata 4740844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 41205629 - 41205504
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||| ||||  ||||| | |||||||||| ||||||||||||||||||||||| ||  || || |||||||| ||| |||||||||| |||||    
T  41205629 ggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattattcaatatatct 41205530  T
Q  214 aaaaaatcaactttatcttataaata 239  Q
    |||||||||||||| |||||||||||    
T  41205529 aaaaaatcaactttctcttataaata 41205504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 30864809 - 30864717
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 211  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||    
T  30864809 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtat 30864717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 33913188 - 33913288
Alignment:
Q  142 tttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagg 241  Q
    |||||||| ||||||||||||||||||||||| ||| |||| ||||||||| |||| ||||| ||| ||| ||||||||||||||||| || ||||||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatttaatatatttaaaaaatcaactttatattgtaaatagg 33913287  T
Q  242 a 242  Q
    |    
T  33913288 a 33913288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 20360515 - 20360579
Alignment:
Q  176 aggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 240  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  20360515 aggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatag 20360579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 39377980 - 39377911
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||| | |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377980 tacttcttccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 39377844 - 39377904
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377844 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 42470982 - 42470922
Alignment:
Q  182 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42470982 ttgactagatatatacattattcaatgtatctacaaaatcaactttcttttataaatagga 42470922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 22857917 - 22857834
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaa 223  Q
    |||||||||||| | ||||||||||||||||||| ||| |||| ||  ||||| ||| ||||||||||||||||||||| ||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaa 22857834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 3037874 - 3037758
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat--ta 201  Q
    |||||||||||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||||||  |||| |||  |||| ||  ||  ||    
T  3037874 tacttcattcggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgtatttggtgtatattctagaccggatacatcaattata 3037775  T
Q  202 ttcaatgtatctaaaaa 218  Q
    |||||||||||||||||    
T  3037774 ttcaatgtatctaaaaa 3037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 20555361 - 20555268
Alignment:
Q  150 cattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||| |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||||||||||||||| || ||| |||||||||||||||    
T  20555361 cattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggac 20555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 44736918 - 44736813
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||||| ||||||||||  |||| ||||||||||||| ||| |||| ||||||||||||  ||| |||| | ||||||  ||| |||| ||||| |||||    
T  44736918 ggtcctttttacaagaaacaattgactttttagatacgttagataaattatgtatttggcttagattctagtctagatgcataaattaatcaatatatct 44736819  T
Q  214 aaaaaa 219  Q
    ||||||    
T  44736818 aaaaaa 44736813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 249
Target Start/End: Original strand, 38983007 - 38983143
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| || || || || ||||||| ||| ||||  |||| | |||||||| || ||  |||| ||| ||||| ||  ||||  ||||| |||    
T  38983007 cggtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatc 38983106  T
Q  213 taaaaaatcaactttatcttataaataggactagagg 249  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38983107 taaaaaatcaacttttttttataaataggactagagg 38983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 4063411 - 4063269
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || |||||||| || ||  |||| || ||| || ||  |||||| |||| |||    
T  4063411 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtattttgtctat-ttctagagtaggtacatcaattattgaatgaatc 4063313  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||| |||||| |||||||||||| || ||||| ||||||    
T  4063312 taaaaaattaactttttcttataaatagaaccagaggtagtatt 4063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 12486131 - 12486072
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||||||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 9152387 - 9152497
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  | || ||||||| ||  |||||||||||| ||||||||||| ||  || | ||||||||| ||  |||| |||||| |||    
T  9152387 cggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatc 9152486  T
Q  213 taaaaaatcaa 223  Q
    |||||| ||||    
T  9152487 taaaaagtcaa 9152497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 34447602 - 34447652
Alignment:
Q  204 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  34447602 caatgaatctaaaaaatcaactttttcttataaataggaccagagggagta 34447652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 259
Target Start/End: Complemental strand, 45034537 - 45034392
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |  ||| || ||  |||||| |||| |||    
T  45034537 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatc 45034439  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtattcta 259  Q
    |||||| | |||||| |||||||||||||||  |||| |||||||||    
T  45034438 taaaaagttaactttttcttataaataggaccggaggtagtattcta 45034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 22857822 - 22857917
Alignment:
Q  123 tacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    ||||||||  |||| |||||||||||||||| |||||||||||||| || | |||  |||  || | ||| ||| |||||||| ||||||||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaa 22857917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 27596764 - 27596729
Alignment:
Q  138 actttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||||||| |||||||||||||||||||    
T  27596764 actttttagatacattgaataatttatgtatttggt 27596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 27182089 - 27182143
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27182089 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27182143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 27831631 - 27831685
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27831631 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 38598606 - 38598536
Alignment:
Q  103 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||||| | ||||||||||||||| |   | ||||||||||||||||||| |||||| ||||||| ||||    
T  38598606 ttacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggt 38598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 41205583 - 41205641
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| ||| |||||||||||| || | | ||||||||||||||| ||||||||||||    
T  41205583 attatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtatt 41205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 28249026 - 28249079
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaa 251  Q
    |||||| |||| ||||||||| |||||||| |||||||||||| ||| ||||||    
T  28249026 attatttaatgaatctaaaaagtcaactttttcttataaatagaactggaggaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 11711323 - 11711387
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||| ||||||||||||||||| | |   |||| |||||||||||||||| |||||| |||||||    
T  11711323 tactccattcggtcctatttacgaaagaaaattgactttttagatacattgaataatgtatgtat 11711387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 41153204 - 41153248
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||| |||||| ||||||||| |||||||| ||||||||||||||    
T  41153204 attactcaatgaatctaaaaagtcaactttttcttataaatagga 41153248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 42341767 - 42341703
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||| |||||||||||||||||   |||| | |||||| ||||||| |||||| |||||||    
T  42341767 tacttcatccggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtat 42341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 29252 - 29382
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29252 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 29351  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  29352 taaaaagtcaactttctcttgtaaataggac 29382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 36099495 - 36099640
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36099495 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 36099594  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtattct 258  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||||    
T  36099595 taaaaaatcaactgtctcttgtaaataggaccggagggagtattct 36099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 31227270 - 31227409
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  31227270 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 31227369  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
     |||||||||||||| |||||||| |||| ||||||||||    
T  31227370 taatgtatctaaaaagtcaactttctcttgtaaataggac 31227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 23125654 - 23125797
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  23125654 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 23125753  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||| ||||||||| |||| |||||| |||| |||| ||||||    
T  23125754 taaaatatcaactttctcttgtaaataagactggagggagtatt 23125797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 5970419 - 5970289
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5970419 cggtcctatttacaagagacaatttactttttagacacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 5970320  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| | |||||||||||||    
T  5970319 taaaaagtcaactttcttttataaataggac 5970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 31854519 - 31854389
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31854519 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtatc 31854420  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||| ||||||    
T  31854419 taaaaagtcaactttctcttgtaattaggac 31854389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 38688051 - 38687925
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  38688051 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattcaatgtatc 38687952  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    |||||| |||||||| |||| ||||||    
T  38687951 taaaaagtcaactttctcttgtaaata 38687925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 19485582 - 19485710
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  19485582 gtcctatttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 19485681  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    ||||||||| ||| |||| ||||||||||    
T  19485682 aaaaatcaattttctcttgtaaataggac 19485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 47948949 - 47949076
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  47948949 gtcctacttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 47949048  T
Q  215 aaaaatcaactttatcttataaatagga 242  Q
    ||||||||||||| |||||||| |||||    
T  47949049 aaaaatcaactttctcttataattagga 47949076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 39877411 - 39877541
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  39877411 cggtcctatttacaagaaacgatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtacc 39877510  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  39877511 taaaaagtcaactttctcttgtaaataggac 39877541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 18430397 - 18430250
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  18430397 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgta 18430298  T
Q  211 tctaaaa--aatcaactttatcttataaataggactagaggaagtatt 256  Q
    | |||||  | |||||||| |||| |||||||||| ||||| ||||||    
T  18430297 tttaaaaagagtcaactttctcttgtaaataggaccagagggagtatt 18430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 55292249 - 55292109
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||    
T  55292249 tcctatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaa 55292150  T
Q  216 aaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||| |||| ||| |||| ||||||||||  |||||||||||    
T  55292149 aaagtcaaatttctcttgtaaataggaccggaggaagtatt 55292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 2279533 - 2279660
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2279632  T
Q  214 aaaaaatcaactttatcttataaatagg 241  Q
    ||||| |||||||| |||| ||||||||    
T  2279633 aaaaagtcaactttctcttgtaaatagg 2279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 4758917 - 4758774
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  4758917 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgtatc 4758818  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  4758817 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 4758774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 35328947 - 35329077
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  35328947 cggtcctatttacaaaaaataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 35329046  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| | | |||| |||| |||| |||||    
T  35329047 taaaaagtgacctttctcttgtaaacaggac 35329077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 2385334 - 2385205
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||    
T  2385334 ggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatct 2385235  T
Q  214 aaaaaatcaactttatcttataaataggac 243  Q
    ||||| |||||||| |||| ||||||||||    
T  2385234 aaaaagtcaactttctcttgtaaataggac 2385205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 53621468 - 53621338
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  53621468 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattattcaatgtatc 53621369  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  53621368 taaaaagtcaactgtctcttgtaaataggac 53621338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 18135453 - 18135310
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||     
T  18135453 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatt 18135354  T
Q  213 taaaa--aatcaactttatcttataaataggactagaggaagta 254  Q
    |||||  | |||||||| |||| |||||||||| ||||| ||||    
T  18135353 taaaaagagtcaactttctcttgtaaataggaccagagggagta 18135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 2411978 - 2411856
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||| ||    
T  2411978 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtattta 2411879  T
Q  215 aaaaatcaactttatcttataaa 237  Q
    |||| | | |||| |||||||||    
T  2411878 aaaagtgatctttctcttataaa 2411856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 6246616 - 6246746
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||| |||||| ||||||||    
T  6246616 cggttctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattattgaatgtatc 6246715  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  6246716 taaaaagtcaactttctcttgtaaataggac 6246746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 580551 - 580422
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||| |||||    
T  580551 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaacgtatc 580452  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||| ||| |||| |||||||||    
T  580451 taaaaagtcaattttctcttgtaaatagga 580422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 56216247 - 56216368
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| | | ||||| |||| ||| ||||||||||||||||||||||||    
T  56216247 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatctaaaa 56216346  T
Q  218 aatcaactttatcttataaata 239  Q
    | |||||||| |||||||||||    
T  56216347 agtcaactttctcttataaata 56216368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 21221128 - 21221255
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||    
T  21221128 gtcctatttacaaaaac-aatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattcaatgtatcta 21221226  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    |||| | | |||| ||||||||| |||||    
T  21221227 aaaagtgatctttctcttataaacaggac 21221255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 38046624 - 38046744
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||  ||||||| |||| ||||| || |||||||||||||||||||| ||| || ||||||| ||| |||||||||||||||||||||||||    
T  38046624 tatttacaagagataatttatttttcagatatataaaataatttatgtatttggtttagatttttgactaaatacatacattattcaatgtatctaaaaa 38046723  T
Q  219 atcaactttatcttataaata 239  Q
    |||||||||||||||||||||    
T  38046724 atcaactttatcttataaata 38046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 44200112 - 44199985
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||||||||   ||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||| ||||    
T  44200112 cggtcttatttacaagagacaatttactttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattattcaatatatc 44200013  T
Q  213 taaaaaatcaactttatcttataaatag 240  Q
     |||||||||||||| |||| |||||||    
T  44200012 aaaaaaatcaactttctcttgtaaatag 44199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 22453442 - 22453535
Alignment:
Q  14 aatatcaagaaggatggagggagaaagtggaggaggagaaggg--ttccagcaataaatttcctaaaggagagagaaagagaaataaaaaatta 105  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22453442 aatagcaagaaggatggagggagaaagtggaggaggagaaggggtttccagcaataaatttcctaaaggagagagaaagggaaataaaaaatta 22453535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 52536091 - 52535965
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| | |||||| || |||||||| |||||||||||||||||||    
T  52536091 cggtcctatttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgtatc 52535992  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    |||||| | |||||| |||||||||||    
T  52535991 taaaaagttaactttttcttataaata 52535965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 20688455 - 20688567
Alignment:
Q  144 tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 20688554  T
Q  244 tagaggaagtatt 256  Q
      |||| ||||||    
T  20688555 cggaggtagtatt 20688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 21229239 - 21229355
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    ||||||||||||  ||||||   |||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  21229239 tatttacaagaaacaatttatcatttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaa 21229338  T
Q  219 atcaactttatcttata 235  Q
    || | ||||||||||||    
T  21229339 atgatctttatcttata 21229355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 49122660 - 49122534
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||| ||    
T  49122660 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattattcaatgt-tc 49122562  T
Q  213 taaaaaatcaactttatcttataaatag 240  Q
    |||||| |||||| | |||| |||||||    
T  49122561 taaaaagtcaactgtctcttgtaaatag 49122534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 51833011 - 51833123
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||    
T  51833011 tactccatccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattatt 51833110  T
Q  204 caatgtatctaaa 216  Q
    || ||||||||||    
T  51833111 cattgtatctaaa 51833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 240
Target Start/End: Original strand, 53303735 - 53303871
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| ||||||||||||||||    |||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  53303735 tactccatccggtcctatttacaagtgacaatttattttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattatt 53303834  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatag 240  Q
    |||||||||||||||| | | ||| |||| |||||||    
T  53303835 caatgtatctaaaaaaaccattttctcttgtaaatag 53303871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 7350345 - 7350242
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||| |    
T  7350345 ggtcatatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatatattt 7350246  T
Q  214 aaaa 217  Q
    ||||    
T  7350245 aaaa 7350242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 39834282 - 39834392
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||||||||   |||||| ||||||||||||||||||||||||| ||||| || ||||||||||| |||||| ||||||||||||||||||     
T  39834282 cggtcttatttacaagagacaatttattttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattattcaatgtatt 39834381  T
Q  213 taaaaaatcaa 223  Q
    |||||||||||    
T  39834382 taaaaaatcaa 39834392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 3086012 - 3085883
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||| ||    
T  3086012 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattattcaatgt-tc 3085914  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| | |  ||| |||| ||||||||||    
T  3085913 taaaaagttatttttctcttgtaaataggac 3085883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 32517892 - 32517780
Alignment:
Q  133 aatttactttttag-atacattaaataattt-atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatc 230  Q
    |||||| ||||||| ||| |||||||||||| ||||||||| | ||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||    
T  32517892 aatttattttttagtatatattaaataattttatgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctc 32517793  T
Q  231 ttataaataggac 243  Q
    |||||||||||||    
T  32517792 ttataaataggac 32517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 15171017 - 15170880
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||| | || |||||||| ||| || ||| |||||||||||||| ||||||    
T  15171017 tatttacaaaaaacaatttactttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaatgtatttaaaaa 15170918  T
Q  219 atcaactttatcttataaataggactagaggaagtatt 256  Q
     |||| ||| |||| |||||| |||  |||| ||||||    
T  15170917 gtcaattttctcttgtaaataagaccggagggagtatt 15170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 29833366 - 29833275
Alignment:
Q  152 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||||||| | |||||||||||||| ||| ||| ||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  29833366 ttaaataatttatgtatttgatttaggttcttgactaaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggac 29833275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 4698634 - 4698741
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||| ||||||||||  |||| | |||||||||||||| |||||||||||||| |||| ||| |||| ||| | ||| ||| ||||||||||||||||||    
T  4698634 tcctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaa 4698733  T
Q  216 aaaatcaa 223  Q
    ||||||||    
T  4698734 aaaatcaa 4698741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 27006515 - 27006586
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgac 186  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  27006515 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttagattcttgac 27006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 4698760 - 4698620
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||| ||  |||| | |||||||||||||| |||||||||||||| |||| |||  |||  || ||||| ||| ||||||||||||||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaa 4698661  T
Q  216 aaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||| |||| | | |||| |||| ||||  ||||| ||||||    
T  4698660 aaattcaattgtttcttgtaaaaaggatcagagggagtatt 4698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 7350242 - 7350184
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||    
T  7350242 attattcaatgtatctaaaatgtcaactttctcttataaataggaccagaggaagtatt 7350184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 54612002 - 54612098
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||||||||||||||||||||||||||         ||| ||| ||| |||||||||||||||||| |||||  |||||||| ||||    
T  54612002 aatttactttttagatacattaaataatttatgtatttgg---------ttg-ctaaatacatacattattcaatgtatttaaaaggtcaactttctctt 54612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 30192036 - 30191893
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||    
T  30192036 cggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatc 30191937  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||||||||| ||| ||||||||||||||||||| | ||||||    
T  30191936 taaaaaatcaattttttcttataaataggactagacggagtatt 30191893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 2643612 - 2643670
Alignment:
Q  109 cattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 167  Q
    |||||||||||||||| ||||| ||||| ||||||||| | |||| |||||||||||||    
T  2643612 cattcggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 43413681 - 43413584
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 211  Q
    |||| |||||||||||||  |||| | |||||||||| |||  ||| ||||||||| |||| ||| ||| |||||| ||| ||||||||||||||||||    
T  43413681 cggttctatttacaagaaacaattgattttttagatatattggata-tttatgtatctggtttagattcatgactacatacatacattattcaatgtat 43413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 31227413 - 31227356
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  31227413 ttcggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtat 31227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 55190676 - 55190804
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||||||| || |||||  |||||||||||| ||| || |  |||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| || |    
T  55190676 ggtcctatatataagaaacaatttacttttttgattcagtggataattgatgtatttggtctat-ttctaggctagatacatcaattattgaatgaatat 55190774  T
Q  214 aaaaaatcaactttatcttataaataggac 243  Q
    |||||||||| ||| |||||||||||||||    
T  55190775 aaaaaatcaattttttcttataaataggac 55190804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 6246748 - 6246688
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| ||||||||||||    
T  6246748 cggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggt 6246688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 21554201 - 21554245
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  21554201 attactcaatgaatctaaaaaatcaactttttcttataaatagga 21554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 53225784 - 53225724
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    |||||||||||| |||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  53225784 cggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggt 53225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 14785009 - 14785084
Alignment:
Q  98 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  14785009 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 14785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 3043911 - 3043802
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    |||||| ||||| ||| |||| |||| || ||||||||||| ||  || | |||||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  3043911 aatttatttttttgattcattgaatagttgatgtatttggtctatttt-tagactaggtacatcaattattgaatgaatctaaaaaattaactttttctt 3043813  T
Q  233 ataaataggac 243  Q
    |||||||||||    
T  3043812 ataaataggac 3043802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 20745360 - 20745469
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    |||||||||||| ||| |||| |||| || ||||||||| | ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  20745360 aatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttctt 20745458  T
Q  233 ataaataggac 243  Q
    |||||||||||    
T  20745459 ataaataggac 20745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 31240974 - 31240876
Alignment:
Q  121 tttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 219  Q
    ||||||||||  |||| |||||||| ||||||| ||||| |||||||||| || ||| || |  || ||||| ||| |||||||||  |||||||||||    
T  31240974 tttacaagaaacaattaactttttaaatacattgaataaattatgtatttagtttagattttaaaccagatacataaattattcaaaatatctaaaaaa 31240876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 29833273 - 29833330
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    |||||||||||||||||   |||| |||||||||||||||| || ||| |||||||||    
T  29833273 cggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 29834598 - 29834554
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataat 160  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  29834598 gtcctatttacaagaaa-aatttactttctagatacattaaataat 29834554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 45828508 - 45828553
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||| |||||| |||||||||||||| ||| |||||||||||||||    
T  45828508 attactcaatgaatctaaaaaatcaattttttcttataaataggac 45828553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 48361190 - 48361049
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||||    
T  48361190 gtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatcta 48361091  T
Q  215 aaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||| ||| |||||||||||||||  |||| ||||||    
T  48361090 aaaagtcaaatttttcttataaataggaccggagggagtatt 48361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 53225737 - 53225782
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||    
T  53225737 attattcaatgaatctaaaaagtcaattttttcttataaataggac 53225782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 16412289 - 16412233
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||| ||  |||||||||    
T  16412289 attattcaatgaatctaaaaagtcaattttttcttataaatagaaccggaggaagta 16412233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 31854378 - 31854442
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||| |||||||| ||||||||   | || |||||||||||||||| |||||| |||||||    
T  31854378 tacttcatccggtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtat 31854442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 55466147 - 55466115
Alignment:
Q  138 actttttagatacattaaataatttatgtattt 170  Q
    |||||||||||| ||||||||||||||||||||    
T  55466147 actttttagatatattaaataatttatgtattt 55466115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 41989563 - 41989703
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41989563 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 41989662  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggact 244  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  41989663 caatgtatctaaaaagtcaactttctcttttaaataggact 41989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 13144888 - 13145031
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13144888 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 13144987  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||    
T  13144988 taaaaaatcaactgtctcttgtaaataggaccggagggagtatt 13145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 31803098 - 31802968
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31803098 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattcaatgtatc 31802999  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  31802998 taaaaagtcaactttctcttgtaaataggac 31802968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 18353345 - 18353205
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||    
T  18353345 tcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatgtaa 18353246  T
Q  216 aaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||||||| |||| ||||||||||  |||| ||||||    
T  18353245 aaaatcaactttctcttgtaaataggacatgagggagtatt 18353205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 36419127 - 36418982
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    ||||| |||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  36419127 ttcggacctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgta 36419028  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    || ||||||||||||||||||| ||||||||||  |||| ||||||    
T  36419027 tcaaaaaaatcaactttatcttgtaaataggaccggagggagtatt 36418982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 37699939 - 37699790
Alignment:
Q  94 aataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 193  Q
    ||||||||  |||| ||| |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||     
T  37699939 aataaaaagatactacatccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatac 37699840  T
Q  194 atacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  37699839 atacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 37699790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 104 - 255
Target Start/End: Complemental strand, 20578804 - 20578653
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| ||||||||||||||||| |   ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  20578804 tacttccttcggtcctatttacaatagacaatttactttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattatt 20578705  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||| |||||    
T  20578704 caatgtatctaaaaagtcaactttctcttataaatagaaccagagggagtat 20578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 25027702 - 25027845
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25027702 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatc 25027801  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  25027802 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 25027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 7749926 - 7750056
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7749926 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 7750025  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  7750026 taaaaagtcaactttctcttgtaaataggac 7750056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 41046836 - 41046962
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  41046836 cggtcctatttacaagagacaatctactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtatc 41046935  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    ||||||||||||||| |||||||||||    
T  41046936 taaaaaatcaactttctcttataaata 41046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 21610441 - 21610312
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  21610441 cggtcctatttacaagaaacaattaactttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattcaatgtatc 21610342  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| | ||||||||||| |||||||||    
T  21610341 taaaaagttaactttatcttgtaaatagga 21610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 15569480 - 15569344
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  15569480 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattatt 15569381  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatag 240  Q
    ||||||||||||||| |||||||| |||| |||||||    
T  15569380 caatgtatctaaaaagtcaactttctcttgtaaatag 15569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 6338453 - 6338326
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  6338453 gtcctatttacaaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 6338354  T
Q  215 aaaaatcaactttatcttataaatagga 242  Q
    |||| |||||||  ||||||||||||||    
T  6338353 aaaagtcaacttcctcttataaatagga 6338326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 904106 - 903976
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  904106 cggttctatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacattattcaatatatc 904007  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  904006 taaaaagtcaactttctcttgtaaataggac 903976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 1108291 - 1108421
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||    
T  1108291 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgcatc 1108390  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    ||||| |||||||||||||  ||||||||||    
T  1108391 taaaagatcaactttatctcgtaaataggac 1108421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 9601733 - 9601603
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  9601733 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattcaatgtatc 9601634  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  9601633 taaaaagtcaactttctcttgtaaataggac 9601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 36417186 - 36417044
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| |    
T  36417186 ggtcctatttataagaaacaatttactttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattcaatgtattt 36417087  T
Q  214 aaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  36417086 aaaaagtcaaatttctcttgtaaataggaccggagggagtatt 36417044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 26898201 - 26898342
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  26898201 gtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatcta 26898300  T
Q  215 aaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||||||| |||| ||||||||||  |||| ||||||    
T  26898301 aaaagtcaactttctcttgtaaataggaccggagggagtatt 26898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 242
Target Start/End: Complemental strand, 16089249 - 16089097
Alignment:
Q  92 gaaataaaaaattacttcattcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactaga 190  Q
    |||||| |||| |||||  |||||||||||||||||||   |||||| ||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  16089249 gaaatagaaaagtacttttttcggtcctatttacaagagacaatttatttttttagatatattaaataatttatgtatttggtttaggttcatgactaga 16089150  T
Q  191 taaatacattattcaatgtatct-aaaaaatcaactttatcttataaatagga 242  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16089149 tacatacattattcaatgtacctaaaaaaatcaactttatcttataaatagga 16089097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 29374181 - 29374321
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  29374181 tcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgtatctaa 29374280  T
Q  216 aaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||| |||||| | |||| ||||||||||  |||| ||||||    
T  29374281 aaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 7945845 - 7945950
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7945845 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattcaatgtatc 7945944  T
Q  213 taaaaa 218  Q
    ||||||    
T  7945945 taaaaa 7945950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 23411196 - 23411316
Alignment:
Q  136 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 235  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||    
T  23411196 ttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaattttctcttgta 23411295  T
Q  236 aataggactagaggaagtatt 256  Q
    |||| |||  |||| ||||||    
T  23411296 aataagaccggagggagtatt 23411316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 2959388 - 2959249
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2959388 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2959289  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2959288 caatgtatctaaaaagtcaattttctcttgtaaataggac 2959249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 2967857 - 2967718
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2967857 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2967758  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2967757 caatgtatctaaaaagtcaattttctcttgtaaataggac 2967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 7053656 - 7053798
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||     
T  7053656 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattattcaatgtatt 7053755  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| ||||| || |||| ||||||||||  |||| ||||||    
T  7053756 taaaaagtcaac-ttctcttgtaaataggaccggagggagtatt 7053798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 41815196 - 41815323
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||    
T  41815196 tcctatttacaataaacaatttactttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaatgtatctaa 41815295  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||||||| |||| ||||||||||    
T  41815296 aaagtcaactttctcttgtaaataggac 41815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 1643352 - 1643495
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||| |   ||||||||||||||||||||| || |||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||    
T  1643352 cggtcctatttacaatagacaatttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgtatc 1643451  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||| | |||||||||||||||  |||| ||||||    
T  1643452 taaaaagtcaactgtctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 2825895 - 2825997
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||| ||| |||| ||||||    
T  2825895 tttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaata 2825994  T
Q  240 gga 242  Q
    |||    
T  2825995 gga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 42311947 - 42311820
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||||| |||    
T  42311947 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaa 42311848  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||| ||| |||| ||||||||||    
T  42311847 aaagtcaattttttcttgtaaataggac 42311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 21090496 - 21090386
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| | || ||| ||||    
T  21090496 aatttactttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagttaattttctctt 21090397  T
Q  233 ataaataggac 243  Q
     ||||||||||    
T  21090396 gtaaataggac 21090386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 6910726 - 6910834
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||  |||||||||||||| ||||||||||    
T  6910726 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaa 6910825  T
Q  219 atcaacttt 227  Q
     ||||||||    
T  6910826 gtcaacttt 6910834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 14338824 - 14338928
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||| |||||||||||   |||| | |||||||||| ||||||||||||||||||||||| ||  ||||||| |||||| ||| ||||||||||||||||    
T  14338824 ggtcttatttacaagagacaattaattttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaatgtatct 14338923  T
Q  214 aaaaa 218  Q
    |||||    
T  14338924 aaaaa 14338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 38393904 - 38393788
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | |||| |||||||||||||  |||| |||||||| ||| ||| ||||||||||| ||||| | ||| |||||||||| ||| ||| ||||||    
T  38393904 tacttcctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattatt 38393805  T
Q  204 caatgtatctaaaaaat 220  Q
    |||||||| | ||||||    
T  38393804 caatgtattttaaaaat 38393788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 15968449 - 15968321
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||||    
T  15968449 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatct 15968351  T
Q  214 aaaaaatcaactttatcttataaataggac 243  Q
    ||||||| |||||| |||||||||||||||    
T  15968350 aaaaaattaactttttcttataaataggac 15968321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 1138226 - 1138351
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| |||||  |||||||||||| |||  ||| ||||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||     
T  1138226 cggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtatttggtcta-tttctagtctagatacattaattatttaatgaatt 1138324  T
Q  213 taaaaaatcaactttatcttataaata 239  Q
    ||||||||||| ||| |||||||||||    
T  1138325 taaaaaatcaattttttcttataaata 1138351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 22731267 - 22731396
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  22731267 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattatttaatgaatc 22731365  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||| |||||| |||||||||||||||    
T  22731366 taaaaaattaactttttcttataaataggac 22731396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 27488486 - 27488357
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || || |||||||| ||  |||| | ||||||| ||  |||||| |||| |||    
T  27488486 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatgaatc 27488388  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||| || ||| |||||||||||||||    
T  27488387 taaaaaattaattttttcttataaataggac 27488357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 42311818 - 42311875
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    ||||||||||||||||||  |||| |||||||| ||||||| |||||| |||||||||    
T  42311818 cggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 21090384 - 21090439
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  21090384 cggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtat 21090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 7272241 - 7272270
Alignment:
Q  140 tttttagatacattaaataatttatgtatt 169  Q
    ||||||||||||||||||||||||||||||    
T  7272241 tttttagatacattaaataatttatgtatt 7272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 7750060 - 7750003
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  7750060 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 7750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 2825997 - 2825945
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 29299407 - 29299367
Alignment:
Q  203 tcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  29299407 tcaatgaatctaaaaaatcaaatttttcttataaataggac 29299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 38394483 - 38394439
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    ||||||||||| ||||||||| |||| ||| ||||||||||||||    
T  38394483 attattcaatgaatctaaaaagtcaattttttcttataaatagga 38394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 14768106 - 14768236
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  14768106 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 14768205  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||| |||| ||||||||||    
T  14768206 taaaaaatcaactttctcttgtaaataggac 14768236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 18765398 - 18765256
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  18765398 cggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 18765299  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||    
T  18765298 taaaaaatcaactttctcttgtaaatatgaccggaggaagtat 18765256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 335515 - 335386
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  335515 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 335416  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||||||| |||| |||||||||    
T  335415 taaaaagtcaactttctcttgtaaatagga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 42605967 - 42605824
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||| ||||||||   |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||    
T  42605967 cggtcctacttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacattattcaatgtatc 42605868  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||    
T  42605867 taaaaaatcaactttatcttgtaaataggactggagggagtatt 42605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 9465211 - 9465081
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  9465211 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 9465112  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| ||||||||||||| ||||||||||    
T  9465111 taaaaagtcaactttatcttgtaaataggac 9465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 19202390 - 19202260
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  19202390 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttattcaatgtatc 19202291  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  19202290 taaaaagtcaactttctcttgtaaataggac 19202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 25846651 - 25846521
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25846651 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 25846552  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||| | | |||||||||||||    
T  25846551 taaaaaatcaactgtcttttataaataggac 25846521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 40464550 - 40464660
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40464550 aatttactttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaaatcaactttatctt 40464649  T
Q  233 ataaataggac 243  Q
    |||||||||||    
T  40464650 ataaataggac 40464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 49122952 - 49123082
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  49122952 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaatgtatc 49123051  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| |||||| ||||||||||||    
T  49123052 taaaaagtcaaatttatcctataaataggac 49123082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 25113489 - 25113348
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  25113489 cggtcctatttacaagagacaatttactttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaatgtatc 25113390  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||| |||||||| |||||||||||||||  |||||||||    
T  25113389 taaaaagtcaactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 21653482 - 21653354
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  21653482 gtcctatttacaagagacaatttactttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaatgtatcta 21653383  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    ||||||||| ||| |||| ||||||||||    
T  21653382 aaaaatcaaatttctcttgtaaataggac 21653354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 26999029 - 26999172
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  26999029 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 26999128  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||| | | |||| ||||||||||  |||| ||||||    
T  26999129 taaaaagtcaaatgtctcttgtaaataggaccggagggagtatt 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 6087041 - 6086911
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6087041 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 6086942  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||| | |||| ||||||||||    
T  6086941 taaaaagtcaactgtctcttgtaaataggac 6086911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 9440283 - 9440138
Alignment:
Q  98 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 197  Q
    |||||||||| | | |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||    
T  9440283 aaaaattactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatac 9440184  T
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||||||||||||||| |||||| | |||| ||||||||||    
T  9440183 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 9440138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 52114162 - 52114045
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  52114162 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatcta 52114063  T
Q  215 aaaaatcaactttatctt 232  Q
    ||||||||||||| ||||    
T  52114062 aaaaatcaactttctctt 52114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 23825160 - 23825283
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  23825160 tcctatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaa 23825259  T
Q  216 aaaatcaactttatcttataaata 239  Q
    ||| |||||||| |||| ||||||    
T  23825260 aaagtcaactttctcttgtaaata 23825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 29019743 - 29019874
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  29019743 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 29019842  T
Q  213 taaaaaatcaactttatcttataaataggact 244  Q
    |||||| |||| ||| |||| |||||||||||    
T  29019843 taaaaagtcaattttctcttgtaaataggact 29019874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 47449927 - 47450054
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  47449927 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaa 47450026  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||||||| | || ||||||||||    
T  47450027 aaactcaactttctattgtaaataggac 47450054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 10049676 - 10049806
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10049676 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 10049775  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| | | |||| ||||||||||    
T  10049776 taaaaagtcaattgtctcttgtaaataggac 10049806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 9190027 - 9190165
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| |||| || |||||||||||    |||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||    
T  9190027 tacttccttcgatcatatttacaagagacgatttacttttaagatacattaaataatttatgtatttggtttaaattcttgactagatacatacattatt 9190126  T
Q  204 caatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  9190127 caatgtatctaaaaagtcaactttctcttataaatagga 9190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 243
Target Start/End: Complemental strand, 28565077 - 28564945
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||||||||   |||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  28565077 ttcggtcctatttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgta 28564978  T
Q  211 tctaaaaaatcaactttatcttataaataggac 243  Q
    | |||||| |||| ||| |||| ||||||||||    
T  28564977 tataaaaagtcaattttctcttgtaaataggac 28564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 51698251 - 51698111
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||| |||||||||| |||||||||||    
T  51698251 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattattgaatgtatctaa 51698152  T
Q  216 aaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||| |||||||| |||| ||||||||||  |||| ||||||    
T  51698151 aaagtcaactttctcttgtaaataggaccggagggagtatt 51698111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 8243822 - 8243679
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  8243822 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 8243723  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||| | | |||| |||||| |||  || ||||||||    
T  8243722 taaaaagtcaattgtctcttgtaaataagaccggatgaagtatt 8243679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 28945664 - 28945794
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| ||| ||||    
T  28945664 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattattgaatatatc 28945763  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||| ||||||||||    
T  28945764 taaaaagtcaattttctcttgtaaataggac 28945794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 40215040 - 40214910
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||||||    
T  40215040 cggtcctatttataagagacaagttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatc 40214941  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  40214940 taaaaagtcaactttctcttgtaaataggac 40214910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 379078 - 379211
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggtt---cttgactagataaatacattattcaatgt 209  Q
    |||||||||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| ||   |||||||||||| ||| ||||||||||||    
T  379078 cggtcctatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaattattcaatgt 379177  T
Q  210 atctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||| |||||||| |||||||||||||||    
T  379178 atctaaaaagtcaactttctcttataaataggac 379211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 42225702 - 42225572
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| ||||||||| ||  |||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||    
T  42225702 cggtcttatttacaaaaaacaatttacttttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattattcaatgtatc 42225603  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||||| || ||| |||| ||||| ||||    
T  42225602 taaaaaattaattttttcttgtaaatgggac 42225572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 13826120 - 13826261
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||   ||||||||||||  |||||||||||||||||| ||||| | |||||||||||||| ||| ||||||| |||||||||||    
T  13826120 cggtcctatttacaagaaacgatttactttttatttacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaatgtatc 13826219  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||| |||||||| |||| ||||||| ||  |||||||||    
T  13826220 taaaaagtcaactttctcttgtaaatagaaccggaggaagta 13826261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 1122305 - 1122413
Alignment:
Q  135 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| |    
T  1122305 tttactttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaatgtatctaaaaagtcaattttctcttgt 1122404  T
Q  235 aaataggac 243  Q
    |||||||||    
T  1122405 aaataggac 1122413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 44593336 - 44593215
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||| || ||| |||| |||||| ||| |||||||||||||| |||||    
T  44593336 ctatttacaaaaagtaatttaatttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaatgtatttaaaa 44593237  T
Q  218 aatcaactttatcttataaata 239  Q
    | |||||||| |||| ||||||    
T  44593236 agtcaactttttcttgtaaata 44593215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 254
Target Start/End: Original strand, 22003794 - 22003945
Alignment:
Q  104 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 202  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22003794 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22003893  T
Q  203 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22003894 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 254
Target Start/End: Original strand, 22011311 - 22011462
Alignment:
Q  104 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 202  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22011311 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22011410  T
Q  203 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 254  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22011411 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22011462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 8825762 - 8825844
Alignment:
Q  136 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||    
T  8825762 ttactttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgcatctaaaaa 8825844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 40142023 - 40141930
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 197  Q
    |||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||| ||||    
T  40142023 tacttccttcagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac 40141930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 39341512 - 39341382
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt---caatgtatc 212  Q
    ||||||||||||||| ||  |||| ||||||||| |||||||||||||| |||||| | ||| |||||||||||||| ||||||||||    ||||||||    
T  39341512 tcctatttacaagaaatacgttacattttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatttaataatgtatc 39341413  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||| ||||||||||    
T  39341412 taaaaagtcaattttctcttgtaaataggac 39341382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 26123046 - 26123128
Alignment:
Q  161 ttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||||    
T  26123046 ttatgcatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcatctttctcttgtaaataggac 26123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 3484342 - 3484460
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    |||||||||||||||   |||| | ||||||||||||||||||| |||||||||||||| ||| ||||||| ||  |||    |||||||||| ||||||    
T  3484342 gtcctatttacaagagacaattaattttttagatacattaaatagtttatgtatttggtttagattcttgagtacgtaa----attattcaatatatcta 3484437  T
Q  215 aaaaatcaactttatcttataaa 237  Q
    ||||||||||||| | |||||||    
T  3484438 aaaaatcaactttcttttataaa 3484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 42841700 - 42841635
Alignment:
Q  152 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||||||||||    
T  42841700 ttaaataatttatgtatttagtttagattcttaactagatatatacattattcaatgtatctaaaa 42841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 55139201 - 55139286
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||| |||||||||||||||| ||||||||||||||||| | ||  |||||||| | ||| ||| |||||||||| ||||||||||    
T  55139201 aattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaa 55139286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 16660401 - 16660334
Alignment:
Q  134 atttactttttagatacattaaataa--tttatgtatttggtgtaggttcttgactagataaatacat 199  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||| ||| ||||||    
T  16660401 atttactttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 8987844 - 8987762
Alignment:
Q  138 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaat 220  Q
    |||||||||||||||| ||||||||||||||||||| ||  |||| ||| | ||| |||  |||||||||| |||||||||||    
T  8987844 actttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaatgcatctaaaaaat 8987762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 22003947 - 22003829
Alignment:
Q  102 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 201  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22003947 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22003848  T
Q  202 ttcaatgtatctaaaaaat 220  Q
    |||||||||||||||||||    
T  22003847 ttcaatgtatctaaaaaat 22003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 22011464 - 22011346
Alignment:
Q  102 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 201  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22011464 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22011365  T
Q  202 ttcaatgtatctaaaaaat 220  Q
    |||||||||||||||||||    
T  22011364 ttcaatgtatctaaaaaat 22011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 28406475 - 28406605
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||| ||||||||||| | || ||||||| ||||||||||| ||  |||| |||  | || ||| ||||||||||| | |    
T  28406475 cggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacc 28406574  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| | | |||| ||||||||||    
T  28406575 taaaaagtcaattgtttcttgtaaataggac 28406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 48593282 - 48593177
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||| ||  |||| |||  |||| ||  |||||||||||||||    
T  48593282 cggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatc 48593183  T
Q  213 taaaaa 218  Q
    ||||||    
T  48593182 taaaaa 48593177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 256
Target Start/End: Original strand, 8243681 - 8243833
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||||| ||||| |||||||||||   |||| |||||||||||||||| |||||| ||||||| | ||  ||  |||  || | ||| ||| ||||||    
T  8243681 tacttcatccggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatt 8243780  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||||||||||||| | || | | |||| ||||||||||  |||| ||||||    
T  8243781 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 8243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 54537585 - 54537454
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||| ||||| | ||| ||||||| ||| ||||  |||| || |||||||| | ||  |||| ||||||||| ||  |||| |||||| |    
T  54537585 ttcggtcctatttataagaaattattgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaa 54537486  T
Q  211 tctaaaaaatcaactttatcttataaatagga 242  Q
    ||| |||| |||| ||| ||||||||||||||    
T  54537485 tcttaaaagtcaaatttttcttataaatagga 54537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 19880869 - 19880917
Alignment:
Q  122 ttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||||    
T  19880869 ttacaagaaacaattgacgttttagatacattaaataatttatgtattt 19880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 43449013 - 43448969
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  43449013 attactcaatgaatctaaaaaatcaactttttcttataaatagga 43448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 51723433 - 51723389
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  51723433 attactcaatgaatctaaaaaatcaactttttcttataaatagga 51723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 10049808 - 10049753
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10049808 cggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtat 10049753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 21662941 - 21662883
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||| ||||||    
T  21662941 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatt 21662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 28406607 - 28406553
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 167  Q
    ||||||||||||||||||  |||| ||||||||| | |||| |||||||||||||    
T  28406607 cggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 53441915 - 53442045
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| |||||  | |||||||||| ||| ||||  |||| | ||||||||||| ||  ||||  || |  || ||  ||||||||||| ||     
T  53441915 cggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatt 53442014  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||||||||||||||    
T  53442015 taaaaagtcaactttttcttataaataggac 53442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 1122417 - 1122360
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||||   |||| |||||||||||||||| || ||| |||||||    
T  1122417 ttcggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtat 1122360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 29019873 - 29019820
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  29019873 gtcctatttacaagagaaaattgactttttagatacattgaataatatatgtat 29019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 29457850 - 29457974
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |||||| || ||  || ||| |||| |||||    
T  29457850 gtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtcta-tttctagactaggtacatcaatcattgaatgaatcta 29457948  T
Q  215 aaaaatcaactttatcttataaatag 240  Q
    |||| | |||||| ||||||||||||    
T  29457949 aaaagttaactttttcttataaatag 29457974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 49885475 - 49885392
Alignment:
Q  156 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 240  Q
    |||||| ||||||||||| ||  |||| ||||||||| ||  |||||| |||| ||||||||||| || ||| ||||||||||||    
T  49885475 ataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaaattaattttttcttataaatag 49885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 5347878 - 5347733
Alignment:
Q  97 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 196  Q
    ||||||||||| | | |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  5347878 aaaaaattactccctccggtcctatttacaagagacaatttactttt-agatacattaaataatttatgtatttggtttaggttcttgactagatacata 5347780  T
Q  197 cattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||    
T  5347779 cattattgaatgtatctaaaaagtcaactttctcttataaataggac 5347733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 23248808 - 23248678
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||    
T  23248808 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattattcaatgtatc 23248709  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| ||||||||||||| ||||||||||    
T  23248708 taaaaagtcaactttatcttgtaaataggac 23248678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 111 - 256
Target Start/End: Original strand, 12763235 - 12763380
Alignment:
Q  111 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 210  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12763235 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 12763334  T
Q  211 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  12763335 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 12763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 3411322 - 3411469
Alignment:
Q  95 ataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaa 194  Q
    |||||| | |||||| | ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |    
T  3411322 ataaaataatacttcttccggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtaca 3411421  T
Q  195 tacattattcaatgtatctaaaaaatcaactttatcttataaatagga 242  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  3411422 tacattattcaatgtatctaaaaagtcaaatttctcttataaatagga 3411469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 30866253 - 30866396
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  30866253 cggtcctatttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 30866352  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    ||||||||||||||| |||| |||||| |||  |||| ||||||    
T  30866353 taaaaaatcaactttctcttgtaaataagaccggagggagtatt 30866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 29770350 - 29770460
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||    
T  29770350 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaatgtatctaaaaagtcaactttaactt 29770449  T
Q  233 ataaataggac 243  Q
    |||||||||||    
T  29770450 ataaataggac 29770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 7463457 - 7463599
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  7463457 cggtcctatttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatc 7463556  T
Q  213 taaaaaa-tcaactttatcttataaataggactagaggaagta 254  Q
    ||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  7463557 taaaaaagtcaattttctcttataaataggaccagagggagta 7463599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 32050214 - 32050093
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  32050214 tatttacaagagacaatttactttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaatatatctaaaaa 32050115  T
Q  219 atcaactttatcttataaatag 240  Q
    ||||| ||| ||||||||||||    
T  32050114 atcaattttctcttataaatag 32050093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 19979627 - 19979491
Alignment:
Q  120 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 219  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  19979627 atttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaa 19979528  T
Q  220 -tcaactttatcttataaataggactagaggaagtat 255  Q
     | |||||| |||||||||||  |||||||| |||||    
T  19979527 gttaactttctcttataaatataactagagggagtat 19979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 34281803 - 34281679
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 218  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||    
T  34281803 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatgtaaaaa 34281704  T
Q  219 atcaactttatcttataaataggac 243  Q
     |||||||| |||| ||||||||||    
T  34281703 gtcaactttctcttgtaaataggac 34281679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 5909620 - 5909481
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  5909620 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattatt 5909521  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
     |||||||||||||  |||| ||| |||| ||||||||||    
T  5909520 gaatgtatctaaaaggtcaattttctcttgtaaataggac 5909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 12426679 - 12426544
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | ||||| |||||||||||   | ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||||||    
T  12426679 tacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattatt 12426580  T
Q  204 caatgtatctaaaaaatcaactttatcttataaata 239  Q
    ||||||||||||||||| |||||| |||||||||||    
T  12426579 caatgtatctaaaaaattaactttctcttataaata 12426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 20397823 - 20397953
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||    
T  20397823 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatc 20397922  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  20397923 taaaaagtcaactttctcttgtaaataggac 20397953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 35427799 - 35427669
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||| |||||||     
T  35427799 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattattgaatgtatt 35427700  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    ||||| ||||| |||||||||||||||||||    
T  35427699 taaaagatcaattttatcttataaataggac 35427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 10599453 - 10599325
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    ||||||||||||||   |||||| |||||||||||||  ||||||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  10599453 tcctatttacaagagacaatttattttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacattattcaatgtatctaa 10599354  T
Q  216 aaaa-tcaactttatcttataaataggac 243  Q
    |||| ||||||||||||| ||||||||||    
T  10599353 aaaagtcaactttatcttgtaaataggac 10599325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 7107638 - 7107781
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||| |||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||    
T  7107638 cggtcatatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatc 7107737  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7107738 taaaaagtcaactttctcttgtaaataggaccggaggtagtatt 7107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 46680968 - 46680840
Alignment:
Q  114 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 213  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||| |||||||| |||    
T  46680968 ggtcttatttacaagaaacaatttactttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaatgtgtct 46680869  T
Q  214 aaaaaatcaactttatcttataaatagga 242  Q
    ||||| |||| |||||| | |||||||||    
T  46680868 aaaaagtcaattttatcatgtaaatagga 46680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 12085142 - 12085034
Alignment:
Q  135 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 234  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||| |  ||| ||||||||||||||||||||||| | |||| ||| |||| |    
T  12085142 tttattttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaatgtatctaaacagtcaattttctcttgt 12085043  T
Q  235 aaataggac 243  Q
    |||||||||    
T  12085042 aaataggac 12085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 15074630 - 15074729
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||||||||||||  |||||||||     ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||    
T  15074630 cggtcctatttacaagaaacaatttactt-----atacattaaataatttatgtatttggtttaagttcttgactagatacatacattattcgatgtatc 15074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 6173938 - 6174072
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||| ||| ||||| |||||||||||   ||||||  |||||||||||   ||  ||||||||||||||| |||||||||||||||||| ||||||||||    
T  6173938 tactccatccggtcatatttacaagagacaatttatattttagataca---aaggatttatgtatttggtttaggttcttgactagatacatacattatt 6174034  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||||||||||||||| |||  || |||||||||||||||    
T  6174035 caatgtatctaaaaaaacaa--ttctcttataaataggac 6174072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 17351627 - 17351486
Alignment:
Q  97 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 196  Q
    |||||| |||| ||| |||||||||||| ||||   |||| | ||||||||||| |||||||||||||||||||  | ||| ||||||| |||||| |||    
T  17351627 aaaaaaatactccatccggtcctatttaaaagagacaattaattttttagatacgttaaataatttatgtatttatt-tagattcttgagtagatacata 17351529  T
Q  197 cattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
     |||||||||||||||||| ||||||||||| || ||||||||    
T  17351528 aattattcaatgtatctaacaaatcaactttctcctataaata 17351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 26563932 - 26564059
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||| ||||||||||  |||| |||||||||||| ||| ||||| ||||||||||||| ||| |||| ||| |||||  || |||||||||||||||| |    
T  26563932 tcctttttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctga 26564031  T
Q  216 aaaatcaactttatcttataaataggac 243  Q
    ||| |||| | | |||| ||||||||||    
T  26564032 aaagtcaattgtttcttgtaaataggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 46449913 - 46449805
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||||||   |||| | |||||| |||||||||||||||||| |||||||| ||| || || | || ||| ||| ||||||||||||||||||||    
T  46449913 ctatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatctaaaa 46449814  T
Q  218 aatcaactt 226  Q
    | |||||||    
T  46449813 agtcaactt 46449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 4826901 - 4826760
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||  || ||  |||||| |||| |||    
T  4826901 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaagtacatcaattattgaatgaatc 4826803  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||| | |||||| |||||||||||||||| |||| |||||    
T  4826802 taaaaagttaactttttcttataaataggactggaggtagtat 4826760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 8566114 - 8566219
Alignment:
Q  138 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 237  Q
    ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||||||||||||| ||| |||||||||    
T  8566114 acttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaa 8566213  T
Q  238 taggac 243  Q
    ||||||    
T  8566214 taggac 8566219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 36655436 - 36655493
Alignment:
Q  182 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| ||||||    
T  36655436 ttgactagatacatacattgttcaatgtatctaaaaattcaattttctcttgtaaata 36655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 18672241 - 18672102
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 203  Q
    |||||| | ||||||| ||||||| ||  |||| || ||||||||||||| ||||||||||||||  ||| ||| |||| | | | ||| ||| ||||      
T  18672241 tacttcttccggtcctttttacaaaaaaaaattgacattttagatacattgaataatttatgtatccggtttagattctaggc-acatacataaattaaa 18672143  T
Q  204 caatgtatctaaaaaatcaactttatcttataaataggact 244  Q
    |||||||||||||||||||| |   |||| |||||||||||    
T  18672142 caatgtatctaaaaaatcaattgcttcttgtaaataggact 18672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 7107770 - 7107715
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   | || |||||||||||||||| ||||||||||||||    
T  7107770 cggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 10007627 - 10007714
Alignment:
Q  156 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||| ||||||||||||| ||  ||||  || ||||| ||  ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  10007627 ataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggac 10007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 22055867 - 22055760
Alignment:
Q  116 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 215  Q
    |||||||||||| ||  |||| ||||||||  || ||| |||||||||| |||||||| ||  ||||| |||  ||| ||| |||||||||| |||||||    
T  22055867 tcctatttacaaaaaacaattgactttttacgtatattgaataatttatttatttggtttaaattctttactgaatacataaattattcaatatatctaa 22055768  T
Q  216 aaaatcaa 223  Q
    ||| ||||    
T  22055767 aaagtcaa 22055760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 26564059 - 26563956
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  |||| |||||| ||||||||| ||||||||| |||| |||| |||  |||  || | ||| |||  ||||||||| ||||||    
T  26564059 gtcctatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatcta 26563960  T
Q  215 aaaa 218  Q
    ||||    
T  26563959 aaaa 26563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 29365714 - 29365772
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||||| ||||||||| |||| ||| ||||||| ||||||||||||| ||||||    
T  29365714 attactcaatgaatctaaaaagtcaattttttcttatatataggactagagggagtatt 29365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 36245384 - 36245514
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||| |||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||    
T  36245384 cggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatc 36245483  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||||||||||||||    
T  36245484 taaaaagtcaattttttcttataaataggac 36245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 2523863 - 2523908
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggac 243  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||    
T  2523863 attactcaatgaatctaaaaagtcaactttttcttataaataggac 2523908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 12085023 - 12085088
Alignment:
Q  104 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 169  Q
    |||| ||| |||||||||||||||||   |||| ||| |||||||||||| |||||| ||||||||    
T  12085023 tactccatccggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtatt 12085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 23248676 - 23248733
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 170  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  23248676 cggtcctatttacaagataaagttgactttttagatacattgaataatatatgtattt 23248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 23871034 - 23870993
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  23871034 attattcaatgtatcgaaaaaatcaaatttttcttataaata 23870993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 28677325 - 28677454
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||  |||    
T  28677325 cggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatc 28677424  T
Q  213 taaaaaatcaactttatcttataaatagga 242  Q
    |||||| |||| ||| ||||||||||||||    
T  28677425 taaaaagtcaattttttcttataaatagga 28677454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 41850651 - 41850610
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    ||||||||||| ||||||||||| |||||| |||||||||||    
T  41850651 attattcaatgaatctaaaaaattaactttttcttataaata 41850610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 32903572 - 32903644
Alignment:
Q  155 aataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 227  Q
    |||||||||||||| |  | ||| ||||||| |||| | ||| ||| | ||||||||||||||||||||||||    
T  32903572 aataatttatgtatcttatttagattcttgattagaaacataaattgtccaatgtatctaaaaaatcaacttt 32903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 46449811 - 46449843
Alignment:
Q  138 actttttagatacattaaataatttatgtattt 170  Q
    |||||||||||||||| ||||||||||||||||    
T  46449811 actttttagatacattgaataatttatgtattt 46449843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 453 - 594
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  453 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaatgtatcta 552  T
Q  215 aaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||| |||| ||| |||| ||||||||||  |||| ||||||    
T  553 aaaagtcaattttctcttgtaaataggaccggagggagtatt 594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 583 - 528
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 168  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  583 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 38833 - 38976
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  38833 cggtcctagttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 38932  T
Q  213 taaaaaatcaactttatcttataaataggactagaggaagtatt 256  Q
    |||||  |||||| | |||| ||||||||||  |||| ||||||    
T  38933 taaaatgtcaactgtctcttgtaaataggaccggagggagtatt 38976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 11038 - 11168
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||| |||||||||||||||    
T  11038 cggtcctttttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatattattcaatgtatc 11137  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||||||| |||| ||||||||||    
T  11138 taaaaagtcaactttctcttgtaaataggac 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 15165 - 15292
Alignment:
Q  115 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 214  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||    
T  15165 gtcctatttacaataaacaatttgctttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaatgtatcta 15263  T
Q  215 aaaaatcaactttatcttataaataggac 243  Q
    |||| | |||||| |||| ||||||||||    
T  15264 aaaagttaactttctcttgtaaataggac 15292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 35962 - 36092
Alignment:
Q  113 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 212  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| || ||||||| |||| |||    
T  35962 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcattattgaatgcatc 36061  T
Q  213 taaaaaatcaactttatcttataaataggac 243  Q
    |||||| |||| ||| |||| ||||||||||    
T  36062 taaaaagtcaattttctcttgtaaataggac 36092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 407 - 516
Alignment:
Q  133 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 232  Q
    ||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||    
T  407 aatttactttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaaccttctctt 506  T
Q  233 ataaatagga 242  Q
     |||||||||    
T  507 gtaaatagga 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 77458 - 77355
Alignment:
Q  140 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 239  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||||||| |||| |||||||| |||||||||||    
T  77458 tttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaattattcaatgtatctgaaaagtcaactttctcttataaata 77359  T
Q  240 ggac 243  Q
    ||||    
T  77358 ggac 77355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 3774 - 3641
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttat---------gtatttggtgtaggttcttgactagataaatacattattcaatgt 209  Q
    |||||||||||   ||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  3774 tatttacaagagacaatttactttttagatacattaaataatttatataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgt 3675  T
Q  210 atctaaaaaatcaactttatcttataaataggac 243  Q
    ||||||||| |||||||| | |||||||||||||    
T  3674 atctaaaaagtcaactttcttttataaataggac 3641  T

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Target: scaffold0067 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 5229 - 5351
Alignment:
Q  118 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    |||||||||||||  ||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||| ||| ||| |||||||||| |||||||||    
T  5229 ctatttacaagaaacaatttacttttttaatatattaaataatttatatatttggtttaggttcttgactaaatacatatattattcaatttatctaaaa 5328  T
Q  218 aatcaactttatcttataaatag 240  Q
    | | || ||| |||| |||||||    
T  5329 agttaattttctcttgtaaatag 5351  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 183926 - 183828
Alignment:
Q  119 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 217  Q
    ||||||||| |||||||| |||||||| ||| ||| ||||||||||||||   || ||| || ||||| | ||| ||| |||||||||||||| |||||    
T  183926 tatttacaaaaattaattaactttttaaatatattgaataatttatgtatcaagtttagatttttgaccaaatacataaattattcaatgtatttaaaa 183828  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 54721 - 54646
Alignment:
Q  98 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 173  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  54721 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 54646  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 16562 - 16505
Alignment:
Q  198 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 255  Q
    |||||| |||| ||||||||||| |||||| |||| ||||||||||| |||| |||||    
T  16562 attattgaatgaatctaaaaaattaactttttcttgtaaataggactggaggtagtat 16505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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