View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6896_low_6 (Length: 241)
Name: NF6896_low_6
Description: NF6896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6896_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12889213 - 12889445
Alignment:
| Q |
1 |
ttcatcataattaccatccttttccttattggtggaatccctgagagaacttgaacttgttacattttttactaacttcgcattttcctccatatcgatg |
100 |
Q |
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| T |
12889213 |
ttcatcatagttaccatccttttccttattggtggaattcccgagagaacttgaacttgttacattttttactaacttcgcattttcctccatatcgata |
12889312 |
T |
|
| Q |
101 |
catgcggctaacctaatgggatcatcaaaacaaccctgatcaaccaacaaaagacactacaatttcaaaattatgactttttattcggcttacatttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12889313 |
catgcggctaacctaatgggatcatcaaaacaacattgatcaaccaacaaaagacactacaatttcaaaattatgactttttattcggcttacatttcat |
12889412 |
T |
|
| Q |
201 |
caaatctgttttgattgtcactgcttgatgtcc |
233 |
Q |
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||| ||||||||||||||||||||||||||||| |
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| T |
12889413 |
caattctgttttgattgtcactgcttgatgtcc |
12889445 |
T |
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