View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6897_low_6 (Length: 365)

Name: NF6897_low_6
Description: NF6897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6897_low_6
NF6897_low_6
[»] chr2 (18 HSPs)
chr2 (1-98)||(6295433-6295530)
chr2 (244-310)||(19523295-19523361)
chr2 (244-312)||(13850076-13850144)
chr2 (244-313)||(1151640-1151709)
chr2 (252-313)||(24727521-24727582)
chr2 (244-312)||(37827677-37827745)
chr2 (134-180)||(5852474-5852519)
chr2 (134-180)||(11728147-11728192)
chr2 (134-180)||(30339993-30340038)
chr2 (134-180)||(30487495-30487540)
chr2 (134-180)||(36383462-36383507)
chr2 (134-180)||(36909869-36909914)
chr2 (134-180)||(40721771-40721816)
chr2 (134-180)||(44484682-44484727)
chr2 (244-313)||(4858224-4858293)
chr2 (244-313)||(38724208-38724277)
chr2 (134-174)||(5031923-5031962)
chr2 (245-313)||(40721883-40721951)
[»] scaffold0036 (1 HSPs)
scaffold0036 (244-313)||(54553-54622)
[»] chr3 (25 HSPs)
chr3 (244-313)||(16295575-16295644)
chr3 (247-313)||(884651-884717)
chr3 (134-180)||(11327108-11327153)
chr3 (134-180)||(54233494-54233539)
chr3 (244-313)||(2280288-2280357)
chr3 (244-313)||(33074984-33075053)
chr3 (245-313)||(9557823-9557891)
chr3 (244-312)||(10565163-10565230)
chr3 (245-313)||(38471754-38471822)
chr3 (136-179)||(38471644-38471686)
chr3 (134-180)||(2280177-2280222)
chr3 (134-180)||(8254027-8254072)
chr3 (134-180)||(14839071-14839116)
chr3 (134-180)||(16295464-16295509)
chr3 (134-180)||(32931944-32931989)
chr3 (134-180)||(36818956-36819001)
chr3 (134-176)||(48405410-48405451)
chr3 (271-313)||(52383137-52383179)
chr3 (244-313)||(29533872-29533941)
chr3 (134-175)||(29573387-29573427)
chr3 (253-310)||(31763927-31763984)
chr3 (245-310)||(33971995-33972060)
chr3 (135-180)||(44689793-44689837)
chr3 (134-179)||(48944737-48944781)
chr3 (135-175)||(47101523-47101562)
[»] chr1 (20 HSPs)
chr1 (244-313)||(40053017-40053086)
chr1 (245-313)||(43757698-43757766)
chr1 (244-310)||(43105216-43105282)
chr1 (244-313)||(28457238-28457307)
chr1 (244-313)||(49615166-49615235)
chr1 (245-313)||(37741843-37741911)
chr1 (254-313)||(644817-644876)
chr1 (133-180)||(35972830-35972876)
chr1 (137-180)||(48336464-48336506)
chr1 (134-180)||(6396327-6396372)
chr1 (134-180)||(12999848-12999893)
chr1 (134-180)||(41564906-41564951)
chr1 (134-180)||(42256460-42256505)
chr1 (244-313)||(2827601-2827670)
chr1 (134-175)||(21433432-21433472)
chr1 (134-179)||(23400016-23400060)
chr1 (244-313)||(31666097-31666166)
chr1 (244-313)||(46903581-46903650)
chr1 (244-313)||(51666871-51666940)
chr1 (136-180)||(50035563-50035606)
[»] scaffold0592 (1 HSPs)
scaffold0592 (244-308)||(1021-1085)
[»] chr8 (21 HSPs)
chr8 (245-313)||(38939083-38939151)
chr8 (134-180)||(5742683-5742728)
chr8 (244-313)||(45405726-45405795)
chr8 (132-175)||(10644833-10644875)
chr8 (244-311)||(33635686-33635753)
chr8 (247-310)||(34578231-34578294)
chr8 (134-180)||(21649194-21649239)
chr8 (134-180)||(27300346-27300391)
chr8 (134-180)||(28156203-28156248)
chr8 (134-180)||(32674258-32674303)
chr8 (134-180)||(35701853-35701898)
chr8 (134-180)||(35937538-35937583)
chr8 (134-180)||(41273515-41273560)
chr8 (134-179)||(22203242-22203286)
chr8 (244-313)||(28156314-28156383)
chr8 (134-179)||(37784401-37784445)
chr8 (134-174)||(1248253-1248292)
chr8 (134-178)||(20288533-20288576)
chr8 (134-178)||(21075162-21075205)
chr8 (132-180)||(37568640-37568687)
chr8 (133-173)||(43602456-43602495)
[»] chr7 (19 HSPs)
chr7 (134-180)||(47944982-47945028)
chr7 (134-180)||(47950412-47950458)
chr7 (245-312)||(28548127-28548194)
chr7 (134-180)||(33050183-33050228)
chr7 (245-313)||(47379672-47379740)
chr7 (134-180)||(2347085-2347130)
chr7 (134-180)||(2600560-2600605)
chr7 (134-180)||(4971290-4971335)
chr7 (134-180)||(11789717-11789762)
chr7 (134-180)||(28548247-28548292)
chr7 (134-180)||(29763830-29763875)
chr7 (134-180)||(30538626-30538671)
chr7 (134-180)||(30864443-30864488)
chr7 (134-180)||(37969931-37969976)
chr7 (134-180)||(44511139-44511184)
chr7 (134-180)||(48639409-48639454)
chr7 (244-313)||(2600425-2600494)
chr7 (244-313)||(37970044-37970113)
chr7 (135-179)||(37325846-37325889)
[»] chr4 (21 HSPs)
chr4 (244-310)||(33777005-33777071)
chr4 (247-313)||(36946983-36947049)
chr4 (244-313)||(6093496-6093565)
chr4 (244-313)||(37732060-37732129)
chr4 (134-179)||(35037609-35037653)
chr4 (134-180)||(3475869-3475914)
chr4 (134-180)||(5208353-5208398)
chr4 (134-180)||(26442416-26442461)
chr4 (134-180)||(29863551-29863596)
chr4 (134-180)||(31318753-31318798)
chr4 (134-180)||(55268027-55268072)
chr4 (134-179)||(1796366-1796410)
chr4 (244-313)||(1987604-1987673)
chr4 (134-179)||(7037511-7037555)
chr4 (244-313)||(30250189-30250258)
chr4 (252-313)||(34538049-34538110)
chr4 (244-313)||(46309014-46309083)
chr4 (134-175)||(51359821-51359861)
chr4 (133-173)||(169535-169574)
chr4 (134-174)||(8810571-8810610)
chr4 (136-180)||(43307395-43307438)
[»] chr6 (5 HSPs)
chr6 (134-180)||(3339525-3339570)
chr6 (134-173)||(28965873-28965911)
chr6 (134-175)||(25127864-25127904)
chr6 (244-313)||(34976727-34976796)
chr6 (133-177)||(2056782-2056825)
[»] chr5 (22 HSPs)
chr5 (244-313)||(29765942-29766011)
chr5 (133-173)||(7077375-7077414)
chr5 (137-180)||(5005105-5005148)
chr5 (134-180)||(1107981-1108026)
chr5 (134-180)||(3031834-3031879)
chr5 (134-180)||(9594478-9594523)
chr5 (134-180)||(9599754-9599799)
chr5 (134-180)||(14914372-14914417)
chr5 (134-180)||(18729315-18729360)
chr5 (134-180)||(28501592-28501637)
chr5 (134-180)||(29765830-29765875)
chr5 (134-180)||(30574403-30574448)
chr5 (134-180)||(39032630-39032675)
chr5 (134-179)||(3263535-3263579)
chr5 (244-313)||(3518294-3518363)
chr5 (244-313)||(8761758-8761827)
chr5 (244-313)||(10469838-10469907)
chr5 (134-175)||(18695318-18695358)
chr5 (134-179)||(25585483-25585527)
chr5 (244-313)||(31625967-31626036)
chr5 (254-310)||(35578971-35579027)
chr5 (134-174)||(42225798-42225837)
[»] scaffold0651 (1 HSPs)
scaffold0651 (134-180)||(4872-4917)
[»] scaffold0542 (1 HSPs)
scaffold0542 (254-312)||(2962-3020)
[»] scaffold0014 (1 HSPs)
scaffold0014 (134-180)||(145061-145106)
[»] scaffold0049 (1 HSPs)
scaffold0049 (132-173)||(72202-72242)


Alignment Details
Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6295530 - 6295433
Alignment:
Q  1 caatctttggttttaaattttattaaatcaaaatctaaacattttaattttaatcgagtggccactattgtgacgactactgagaatctaatttcaac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||  |||||||||||||||||    
T  6295530 caatctttggttttaaattttattaaatcaaaatctaaacattttaatcttaatcgagcggccactgatgtgacgactatagagaatctaatttcaac 6295433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 19523361 - 19523295
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||||||||||||||||||||||| || |  || |||||||||||||||||||||  ||||||||    
T  19523361 gaccaataaaaagagagaacaataaaattgtaccaaaaattgtaccaaaatagttgtttaaatatca 19523295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 13850144 - 13850076
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcact 312  Q
    ||||||| |||||||||||||| ||| || ||||| || || ||||||||||||||| |||||||||||    
T  13850144 gaccaatgaaaagagagaacaacaaaattgtctcaaaagttataccaaaatagttgtcaaaatatcact 13850076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 1151640 - 1151709
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||| ||||||||| ||| || ||||| |  |||||||||||||||||| ||||||||||||    
T  1151640 gaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcacta 1151709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 24727521 - 24727582
Alignment:
Q  252 aaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  24727521 aaaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 24727582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 37827745 - 37827677
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcact 312  Q
    ||||||| |||||||||||||| ||| || ||| | | |||||||||||||| |||| |||||||||||    
T  37827745 gaccaatgaaaagagagaacaacaaagttgtcttaaagattgtaccaaaataattgttaaaatatcact 37827677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 5852474 - 5852519
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  5852474 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaac 5852519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 11728192 - 11728147
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||    
T  11728192 gagaaatgatgtttgtacaa-ccattttggtacaacttttgtacaac 11728147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30339993 - 30340038
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  30339993 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaac 30340038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30487540 - 30487495
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  30487540 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 30487495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 36383462 - 36383507
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||    
T  36383462 gagaaatgatatttgtacaaa-gattttgtgacaacttttgtacaac 36383507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 36909914 - 36909869
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||    
T  36909914 gagaaatgatatttgtacaa-ccattttgtgacaacttttggacaac 36909869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 40721771 - 40721816
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||    
T  40721771 gagaaatgatatttgtacag-ccattttggtacaacttttgtacaac 40721816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 44484727 - 44484682
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||    
T  44484727 gagaaatgatatttgtacaa-ccattttgtaacaatttttgtacaac 44484682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 4858224 - 4858293
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||||||||||||| ||| || ||||| |  ||||||||||||  |||| ||||||||||||    
T  4858224 gaccaatgaaaagagagaacaacaaaattgtctcaaaggttgtaccaaaatgattgtcaaaatatcacta 4858293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 38724277 - 38724208
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| || ||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  38724277 gaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 38724208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 5031923 - 5031962
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttg 174  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  5031923 gagaaatgatatttgtac-aaccattttgtaacaacttttg 5031962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 40721883 - 40721951
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  40721883 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 40721951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 54622 - 54553
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||||||||| ||| || ||||| | ||||||||||||||||||| ||||||||||||    
T  54622 gaccaataaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgtcaaaatatcacta 54553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 16295575 - 16295644
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||||||||| ||| || ||||| || |||||||||||||||||| ||||||||||||    
T  16295575 gaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaatagttgtcaaaatatcacta 16295644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 884651 - 884717
Alignment:
Q  247 caataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| |||||| ||||| ||| || ||||| ||||| ||||||||||||||| ||||||||||||    
T  884651 caataagaagagaaaacaacaaaattctctcaaaaattataccaaaatagttgttaaaatatcacta 884717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 11327108 - 11327153
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11327108 gagaaatgatatttgtacaa-ccattttgtgacaacttttgtacaac 11327153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 54233539 - 54233494
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  54233539 gagaaatgatatttgtacaa-ccatttttttacaacttttgtacaac 54233494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 2280288 - 2280357
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| | ||||||||||||| ||||| ||||||||||||    
T  2280288 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcacta 2280357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 33074984 - 33075053
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||| ||||||||| ||| || ||||| |  |||||| ||||||||||| ||||||||||||    
T  33074984 gaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcacta 33075053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 9557891 - 9557823
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| || ||||| || ||||||||||||| |||| ||||||||||||    
T  9557891 accaatgagaagagagaacaacaaaattgtctcaaaagttgtaccaaaataattgtcaaaatatcacta 9557823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 10565163 - 10565230
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcact 312  Q
    |||||||||||| ||||||||||||| || ||||| ||  ||||||||||| ||||| |||||||||||    
T  10565163 gaccaataaaaatagagaacaataaagttgtctca-aaggtgtaccaaaatggttgttaaaatatcact 10565230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 38471754 - 38471822
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| || ||||| | |||||||||||||| |||| ||||||||||||    
T  38471754 accaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaataattgtcaaaatatcacta 38471822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 38471644 - 38471686
Alignment:
Q  136 gaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  38471644 gaaatgatatttgtacaa-ccattttggtacaacttttgtacaa 38471686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 2280177 - 2280222
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  2280177 gagaaatgatatttgtac-aaccattttagtacaacttttgtacaac 2280222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 8254027 - 8254072
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  8254027 gagaaatgatatttgtac-aaccattttgtgacaactttggtacaac 8254072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 14839116 - 14839071
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  14839116 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 14839071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16295464 - 16295509
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||    
T  16295464 gagaaatgatatttgtac-aaccaatttgatacaacttttgtacaac 16295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 32931989 - 32931944
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  32931989 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 32931944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 36818956 - 36819001
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  36818956 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtacaac 36819001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 48405410 - 48405451
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgta 176  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  48405410 gagaaatgatatttgtac-aaccattttgtgacaacttttgta 48405451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 52383137 - 52383179
Alignment:
Q  271 ttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||| | ||||||||||||||||||| ||||||||||||    
T  52383137 ttatctcaaagattgtaccaaaatagttgtcaaaatatcacta 52383179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 29533872 - 29533941
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| || ||||||||||||  |||| ||||||||||||    
T  29533872 gaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgtcaaaatatcacta 29533941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 29573427 - 29573387
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  29573427 gagaaatgatatttgtac-aaccattttgtaacaacttttgt 29573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 31763927 - 31763984
Alignment:
Q  253 aaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    ||||||||||||| ||| || || || |||||||||||||||||||||  ||||||||    
T  31763927 aaagagagaacaacaaaattgtcccaaaaattgtaccaaaatagttgtttaaatatca 31763984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 33971995 - 33972060
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||| | |||||||||||| ||  || ||||| |||||||||||||||||||||  ||||||||    
T  33971995 accaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatca 33972060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 44689793 - 44689837
Alignment:
Q  135 agaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||    
T  44689793 agaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 44689837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 48944781 - 48944737
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  48944781 gagaaatgatatttgtac-aaccattttctaacaacttttgtacaa 48944737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 47101523 - 47101562
Alignment:
Q  135 agaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  47101523 agaaatgatatttgtac-aaccattttgtgacaacttttgt 47101562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 40053017 - 40053086
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||||||||||||| ||| || ||||| | ||||||||||||||||||| ||||||||||||    
T  40053017 gaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgttaaaatatcacta 40053086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 43757698 - 43757766
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| |||||||||||||| ||| || ||||| ||||| ||||||||||||||| ||||||||||||    
T  43757698 accaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaatagttgtcaaaatatcacta 43757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 43105216 - 43105282
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||||||||||||||||||||||| || || || |||||||||||||||| ||||  ||||||||    
T  43105216 gaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaataattgttcaaatatca 43105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 28457307 - 28457238
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||| ||||||||||||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  28457307 gaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 28457238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 49615235 - 49615166
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | || ||||||||||||| || ||||| | ||||||||||||| ||||| ||||||||||||    
T  49615235 gaccaatgagaaaagagaacaataaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcacta 49615166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 37741911 - 37741843
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| || ||||| |||||||| |||||| ||||| ||||||||||||    
T  37741911 accaatgagaagagagaacaacaaagttgtctcaaaaattgtatcaaaatggttgtcaaaatatcacta 37741843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 644817 - 644876
Alignment:
Q  254 aagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  644817 aagagagaacaataaagttgtctcaaatgttgtaccaaaatggttgtcaaaatatcacta 644876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 35972876 - 35972830
Alignment:
Q  133 cgagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  35972876 cgagaaatgatatttgttcaa-ccattttgtgacaacttttgtacaac 35972830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 48336506 - 48336464
Alignment:
Q  137 aaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  48336506 aaatgatatttgtacaa-ccattttgatacaacttttgtacaac 48336464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6396327 - 6396372
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  6396327 gagaaatgatattggtacaa-ccattttggtacaacttttgtacaac 6396372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 12999893 - 12999848
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  12999893 gagaaatgatatttgtacaa-ccattttctaacaacttttgtacaac 12999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 41564951 - 41564906
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  41564951 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 41564906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 42256460 - 42256505
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  42256460 gagaaatgatatttgtac-aaccattttgtgacaactttggtacaac 42256505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 2827670 - 2827601
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||||| |||||||||||| ||| || ||||| |  |||||||||||| ||| | ||||||||||||    
T  2827670 gaccaataagaagagagaacaacaaaattgtctcaaaggttgtaccaaaatggttatcaaaatatcacta 2827601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 21433472 - 21433432
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  21433472 gagaaatgatatttgtac-aaccattttgtaacaacttttgt 21433432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 23400060 - 23400016
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||    
T  23400060 gagaaatgatatttgtac-aaccatttttatacaacttttgtacaa 23400016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 31666166 - 31666097
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| | ||||||||||||| ||||| ||||||| ||||    
T  31666166 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatattacta 31666097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 46903581 - 46903650
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  46903581 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 46903650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 51666871 - 51666940
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||||||||||||| |||| ||  ||||| || ||||| || ||||||||||||  |||||||||||    
T  51666871 gaccaataaaaagagagcacaacaatattatcccaaaaattatagcaaaatagttgttcaaatatcacta 51666940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 50035606 - 50035563
Alignment:
Q  136 gaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||    
T  50035606 gaaatgatatttgtacaa-ccattttgtgacaacttttatacaac 50035563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 1021 - 1085
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatat 308  Q
    ||||||| |||||||||||||| ||| |||||||| || |||||||||||||||||| |||||||    
T  1021 gaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgtcaaaatat 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 38939151 - 38939083
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| |||||||| ||||||||||||||| ||||| ||||||||||||    
T  38939151 accaatgagaagagagaacaacaaagttatctcaaaaattgtaccaaaatggttgtcaaaatatcacta 38939083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5742728 - 5742683
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  5742728 gagaaatgatatttgtacaa-ccattttggtacaacttttgtacaac 5742683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 45405795 - 45405726
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||||||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  45405795 gaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 45405726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 10644875 - 10644833
Alignment:
Q  132 tcgagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  10644875 tcgagaaatgatatttgtac-aaccattttgtaacaacttttgt 10644833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 33635686 - 33635753
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcac 311  Q
    ||||||| | |||||||||||||||| |||||||| | ||||||  ||||| ||||| ||||||||||    
T  33635686 gaccaatgagaagagagaacaataaagttatctcaaagattgtattaaaatggttgtcaaaatatcac 33635753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 34578294 - 34578231
Alignment:
Q  247 caataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||| |||||||||||| ||| || || || ||||| ||||||||||||||| |||||||||    
T  34578294 caataagaagagagaacaacaaagttgtcccaaaaattataccaaaatagttgttaaaatatca 34578231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 21649239 - 21649194
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  21649239 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 21649194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 27300346 - 27300391
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  27300346 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaac 27300391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 28156203 - 28156248
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||    
T  28156203 gagaaatgatatttgtac-aaccattttggtacaatttttgtacaac 28156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 32674303 - 32674258
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||    
T  32674303 gagaaatgatatttgtacaa-ccattttggtataacttttgtacaac 32674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 35701898 - 35701853
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  35701898 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 35701853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 35937583 - 35937538
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||    
T  35937583 gagaaatgatatttgtacaa-ccattttgtaacaacttttggacaac 35937538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 41273515 - 41273560
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||    
T  41273515 gagaaatgatatttgtacaaa-caatttgtgacaacttttgtacaac 41273560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 22203286 - 22203242
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||    
T  22203286 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaa 22203242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 28156314 - 28156383
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| |  |||||| ||||||||||| ||||||||||||    
T  28156314 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcacta 28156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 37784445 - 37784401
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| |||||||||| || |||||||||||||    
T  37784445 gagaaatgatatttgtac-aaccattttggtataacttttgtacaa 37784401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 1248253 - 1248292
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttg 174  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  1248253 gagaaatgatatttgtac-aaccattttcttacaacttttg 1248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 20288533 - 20288576
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtaca 178  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  20288533 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtaca 20288576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21075162 - 21075205
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtaca 178  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  21075162 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtaca 21075205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 37568687 - 37568640
Alignment:
Q  132 tcgagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||||||||| |||||||| |||| |||| ||||||    
T  37568687 tcgagaaatgatatttgtacaaa-cattttgtgacaatttttatacaac 37568640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 43602495 - 43602456
Alignment:
Q  133 cgagaaatgatatttgtacaaaccattttgttacaactttt 173  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  43602495 cgagaaatgatatttgtac-aaccattttgctacaactttt 43602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 47944982 - 47945028
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  47944982 gagaaatgatatttgtacaaaccatttttgtacaacttttgtacaac 47945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 47950412 - 47950458
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  47950412 gagaaatgatatttgtacaaaccatttttgtacaacttttgtacaac 47950458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 28548194 - 28548127
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcact 312  Q
    |||||||| |||||||||||||||| || ||||| | ||||||| ||||| ||||| |||||||||||    
T  28548194 accaataagaagagagaacaataaagttgtctcaaagattgtactaaaatggttgttaaaatatcact 28548127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 33050183 - 33050228
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33050183 gagaaatgatatttgtacaa-ccattttgtgacaacttttgtacaac 33050228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 47379672 - 47379740
Alignment:
Q  245 accaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| | |||||||||||| ||| || ||||| || ||| |||||||||||||| ||||||||||||    
T  47379672 accaatgagaagagagaacaacaaagttgtctcaaaagttgcaccaaaatagttgtcaaaatatcacta 47379740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 2347130 - 2347085
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||    
T  2347130 gagaaatgatatttgtacaa-ccattttgtgacaactttggtacaac 2347085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 2600605 - 2600560
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  2600605 gagaaatgatatttgtacaa-ccattttagtacaacttttgtacaac 2600560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 4971290 - 4971335
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  4971290 gagaaatgatatttgtac-aaccattttgtgacaacttttatacaac 4971335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 11789762 - 11789717
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  11789762 gagaaatgatatttgtacaa-ccattttagtacaacttttgtacaac 11789717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 28548292 - 28548247
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||    
T  28548292 gagaaatgatatttgtacaa-ctattttggtacaacttttgtacaac 28548247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29763830 - 29763875
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  29763830 gagaaatgatatttgtac-aaccattttgtgataacttttgtacaac 29763875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30538626 - 30538671
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  30538626 gagaaatgatatttgtac-aacaattttggtacaacttttgtacaac 30538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30864488 - 30864443
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  30864488 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 30864443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 37969931 - 37969976
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  37969931 gagaaatgatatttgtac-aactattttgatacaacttttgtacaac 37969976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 44511139 - 44511184
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  44511139 gagaaatgatattcgtacaa-ccattttgtgacaacttttgtacaac 44511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 48639454 - 48639409
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  48639454 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 48639409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 2600494 - 2600425
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  2600494 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 2600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 37970044 - 37970113
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  37970044 gaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatcacta 37970113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 37325889 - 37325846
Alignment:
Q  135 agaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||    
T  37325889 agaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaa 37325846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 33777005 - 33777071
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||||||||||||||||||| ||  ||||| || |||||||||||||||||||||  ||||||||    
T  33777005 gaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatca 33777071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 36947049 - 36946983
Alignment:
Q  247 caataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||||||||||||||| ||| |||||||| ||||| || |||||| ||||| ||||||||||||    
T  36947049 caataaaaagagagaacaacaaaattatctcaaaaattatatcaaaatggttgtcaaaatatcacta 36946983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 6093565 - 6093496
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||| ||||||||||||||||| ||| || ||||| | ||| ||||||||||||||| ||||||||||||    
T  6093565 gaccgataaaaagagagaacaacaaaattgtctcaaagattataccaaaatagttgttaaaatatcacta 6093496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 37732060 - 37732129
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||||||||||||| || | ||| | |||||||| |||| ||||| ||||||||||||    
T  37732060 gaccaataaaaagagagaacaataaagttgtttcaaagattgtaccgaaatggttgttaaaatatcacta 37732129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35037609 - 35037653
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  35037609 gagaaatgatatttgtacaa-ccattttgatacaacttttgtacaa 35037653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3475869 - 3475914
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||    
T  3475869 gagaaatgatatttgtac-aaccattttatgacaacttttgtacaac 3475914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5208398 - 5208353
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  5208398 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 5208353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 26442461 - 26442416
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  26442461 gagaaatgatatttgtacaa-ccattttggtacaacttttgcacaac 26442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29863551 - 29863596
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||    
T  29863551 gagaaatgatatttgtac-aaccattttggtataacttttgtacaac 29863596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 31318753 - 31318798
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||    
T  31318753 gagaaatgatatttgtac-aaccattttggtacaatttttgtacaac 31318798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 55268072 - 55268027
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  55268072 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 55268027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 1796366 - 1796410
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||    
T  1796366 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtacaa 1796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 1987673 - 1987604
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||||||||||||| ||| || ||||| |  ||||||||||||  |||| ||||||||||||    
T  1987673 gaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgtcaaaatatcacta 1987604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 7037555 - 7037511
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||    
T  7037555 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtacaa 7037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 30250258 - 30250189
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||||||||||||||||||| ||| || ||||| |  ||||||||||||  || | ||||||||||||    
T  30250258 gaccaataaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgatttttaaaatatcacta 30250189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 34538049 - 34538110
Alignment:
Q  252 aaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    |||||| ||||||| ||| || ||||| |  |||||||||||||||||| ||||||||||||    
T  34538049 aaaagatagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcacta 34538110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 46309083 - 46309014
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||||||||||| | ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  46309083 gaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 46309014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 51359861 - 51359821
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  51359861 gagaaatgatatttgtac-aaccattttgtgacaacttttgt 51359821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 169574 - 169535
Alignment:
Q  133 cgagaaatgatatttgtacaaaccattttgttacaactttt 173  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  169574 cgagaaatgatatttgtac-aaccattttgtgacaactttt 169535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 8810571 - 8810610
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttg 174  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  8810571 gagaaatgatatttgtac-aaccattttcttacaacttttg 8810610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 43307438 - 43307395
Alignment:
Q  136 gaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||  |||||||||||||||||    
T  43307438 gaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 43307395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 3339570 - 3339525
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  3339570 gagaaatgatatttgtacaa-ccattttgtgacaacttttgtacaac 3339525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 28965911 - 28965873
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaactttt 173  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28965911 gagaaatgatatttgtacaa-ccattttgttacaactttt 28965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 25127904 - 25127864
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  25127904 gagaaatgatatttgtac-aaccattttgtaacaacttttgt 25127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 34976727 - 34976796
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| |||||||| |  |||||||||||| ||||  ||||||||||||    
T  34976727 gaccaatgagaagagagaacaacaaagttatctcaaaggttgtaccaaaatggttgacaaaatatcacta 34976796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 2056782 - 2056825
Alignment:
Q  133 cgagaaatgatatttgtacaaaccattttgttacaacttttgtac 177  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||    
T  2056782 cgagaaatgatatttgtac-aaccaatttgtgacaacttttgtac 2056825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 29765942 - 29766011
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| || | ||||||||| ||| |||||||| |  |||||||||||||||||| ||||||||||||    
T  29765942 gaccaatgaataaagagaacaacaaagttatctcaaaggttgtaccaaaatagttgtcaaaatatcacta 29766011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 7077414 - 7077375
Alignment:
Q  133 cgagaaatgatatttgtacaaaccattttgttacaactttt 173  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7077414 cgagaaatgatatttgtacaa-ccattttgttacaactttt 7077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 5005105 - 5005148
Alignment:
Q  137 aaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||    
T  5005105 aaatgatatttgcacaaaccattttggtacaacatttgtacaac 5005148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 1107981 - 1108026
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  1107981 gagaaatgatatttgtacga-ctattttgttacaacttttgtacaac 1108026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3031834 - 3031879
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  3031834 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaac 3031879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 9594478 - 9594523
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  9594478 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtacaac 9594523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 9599799 - 9599754
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  9599799 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 9599754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 14914372 - 14914417
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||    
T  14914372 gagaaatgatatttgtac-aaccattttgtgacaacttttggacaac 14914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 18729360 - 18729315
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  18729360 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 18729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 28501592 - 28501637
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  28501592 gagaaatgatatttgtac-aaccattttgtgacaatttttgtacaac 28501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29765830 - 29765875
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  29765830 gagaaatgatatttgtac-aaccattttagtacaacttttgtacaac 29765875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30574448 - 30574403
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  30574448 gagaaatgatatttgtacaa-ccaatttgtgacaacttttgtacaac 30574403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 39032675 - 39032630
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||    
T  39032675 gagaaatgatatttgtacaa-ccatttttgtacaacttttgtacaac 39032630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 3263579 - 3263535
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||    
T  3263579 gagaaatgatatttgtac-aaccaatttgtgacaacttttgtacaa 3263535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 3518294 - 3518363
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| |  |||||||||||| ||||| ||||||||||||    
T  3518294 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcacta 3518363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 8761758 - 8761827
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| |||||||||||||| ||| || ||||| |  |||||||||||| ||||| || |||||||||    
T  8761758 gaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaacatatcacta 8761827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 10469907 - 10469838
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||| ||| || ||||| | |||||||||||||  |||| ||||||||||||    
T  10469907 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatgattgtcaaaatatcacta 10469838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 18695318 - 18695358
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgt 175  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  18695318 gagaaatgatatttgtac-aaccattttgtaacaacttttgt 18695358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 25585527 - 25585483
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaa 179  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||    
T  25585527 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaa 25585483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 31626036 - 31625967
Alignment:
Q  244 gaccaataaaaagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcacta 313  Q
    ||||||| | |||||||||||||||| || ||| | || |||||| ||||| ||||| ||||||||||||    
T  31626036 gaccaatgagaagagagaacaataaagttgtcttaaaagttgtactaaaatggttgtcaaaatatcacta 31625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 35578971 - 35579027
Alignment:
Q  254 aagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatca 310  Q
    |||||||||||||||| ||||| || ||||| |||||||||| ||||  ||||||||    
T  35578971 aagagagaacaataaaattatcccaaaaattataccaaaataattgttcaaatatca 35579027  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 42225837 - 42225798
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttg 174  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  42225837 gagaaatgatatttgta-aaaccattttgtaacaacttttg 42225798  T

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Target: scaffold0651 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 4917 - 4872
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  4917 gagaaatgatatttgtacaa-ccattttggtacaatttttgtacaac 4872  T

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Target: scaffold0542 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 2962 - 3020
Alignment:
Q  254 aagagagaacaataaatttatctcagaaattgtaccaaaatagttgtaaaaatatcact 312  Q
    |||| ||||||| ||| |||||||| | ||| ||||||||||||||| |||||||||||    
T  2962 aagaaagaacaaaaaaattatctcaaagattataccaaaatagttgtcaaaatatcact 3020  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 145061 - 145106
Alignment:
Q  134 gagaaatgatatttgtacaaaccattttgttacaacttttgtacaac 180  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  145061 gagaaatgatatttgtac-aaccatttttgtacaacttttgtacaac 145106  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 72242 - 72202
Alignment:
Q  132 tcgagaaatgatatttgtacaaaccattttgttacaactttt 173  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  72242 tcgagaaatgatatttgtac-aaccattttgtaacaactttt 72202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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