View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6898_low_1 (Length: 910)

Name: NF6898_low_1
Description: NF6898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6898_low_1
NF6898_low_1
[»] chr7 (37 HSPs)
chr7 (21-449)||(4844242-4844683)
chr7 (502-893)||(4843276-4843667)
chr7 (623-888)||(3012288-3012548)
chr7 (623-841)||(19377419-19377638)
chr7 (623-844)||(28693892-28694134)
chr7 (623-835)||(814862-815070)
chr7 (623-888)||(35300317-35300565)
chr7 (622-829)||(21932630-21932858)
chr7 (655-857)||(38128902-38129100)
chr7 (629-851)||(23704364-23704570)
chr7 (623-736)||(22206575-22206688)
chr7 (623-736)||(22228051-22228164)
chr7 (623-708)||(26722848-26722933)
chr7 (623-831)||(21688149-21688375)
chr7 (623-733)||(5991309-5991419)
chr7 (623-790)||(41862235-41862398)
chr7 (638-825)||(42439466-42439649)
chr7 (767-871)||(26722955-26723059)
chr7 (767-888)||(41759625-41759745)
chr7 (774-888)||(5991432-5991542)
chr7 (638-729)||(7873124-7873215)
chr7 (774-888)||(7873232-7873345)
chr7 (634-743)||(38991077-38991186)
chr7 (380-443)||(4709774-4709837)
chr7 (637-703)||(41759530-41759596)
chr7 (625-712)||(25688102-25688189)
chr7 (785-858)||(22206709-22206782)
chr7 (785-858)||(22227957-22228030)
chr7 (774-871)||(25688202-25688299)
chr7 (31-86)||(4709851-4709906)
chr7 (657-712)||(30852447-30852502)
chr7 (771-831)||(38991181-38991241)
chr7 (623-669)||(38575128-38575174)
chr7 (774-821)||(30852387-30852434)
chr7 (623-673)||(19400247-19400297)
chr7 (623-673)||(22937702-22937752)
chr7 (623-672)||(27387166-27387215)
[»] chr3 (32 HSPs)
chr3 (623-871)||(41218244-41218492)
chr3 (625-825)||(33178983-33179199)
chr3 (625-888)||(7500940-7501186)
chr3 (623-737)||(28311395-28311509)
chr3 (623-737)||(14461183-14461297)
chr3 (623-730)||(43700082-43700189)
chr3 (625-737)||(53652016-53652128)
chr3 (623-737)||(12909946-12910058)
chr3 (623-710)||(37516766-37516853)
chr3 (706-864)||(41358570-41358729)
chr3 (622-710)||(26370930-26371018)
chr3 (623-710)||(25391734-25391821)
chr3 (767-871)||(26371038-26371142)
chr3 (623-737)||(44047702-44047815)
chr3 (767-871)||(37516642-37516746)
chr3 (691-831)||(53068282-53068418)
chr3 (774-871)||(26278363-26278460)
chr3 (623-712)||(53987974-53988064)
chr3 (774-863)||(35077232-35077321)
chr3 (623-710)||(26278475-26278562)
chr3 (768-831)||(53651938-53652001)
chr3 (767-831)||(44047624-44047688)
chr3 (774-831)||(53987904-53987961)
chr3 (767-831)||(25391841-25391905)
chr3 (767-831)||(28311317-28311381)
chr3 (656-712)||(41358541-41358597)
chr3 (769-822)||(38239502-38239555)
chr3 (767-831)||(14461105-14461169)
chr3 (706-745)||(41199866-41199905)
chr3 (764-807)||(43447620-43447663)
chr3 (765-831)||(36869959-36870025)
chr3 (774-831)||(9600390-9600447)
[»] chr2 (29 HSPs)
chr2 (623-839)||(17148808-17149023)
chr2 (685-888)||(25562914-25563116)
chr2 (623-830)||(17249354-17249557)
chr2 (623-737)||(41114758-41114872)
chr2 (623-824)||(303980-304198)
chr2 (623-831)||(13203802-13203994)
chr2 (623-737)||(29257479-29257593)
chr2 (623-831)||(6799774-6799966)
chr2 (623-825)||(12000564-12000784)
chr2 (635-737)||(41010625-41010727)
chr2 (641-731)||(18299049-18299139)
chr2 (623-712)||(2475944-2476033)
chr2 (714-831)||(41010510-41010627)
chr2 (657-779)||(45444376-45444494)
chr2 (623-710)||(22572610-22572697)
chr2 (658-825)||(15651248-15651433)
chr2 (625-799)||(16220919-16221089)
chr2 (710-825)||(33909301-33909416)
chr2 (767-831)||(18299159-18299223)
chr2 (767-831)||(41114886-41114950)
chr2 (767-825)||(22572717-22572775)
chr2 (767-831)||(29257401-29257465)
chr2 (623-711)||(33909235-33909323)
chr2 (763-851)||(34756706-34756794)
chr2 (622-673)||(18425813-18425864)
chr2 (335-437)||(39262258-39262360)
chr2 (622-673)||(42755570-42755621)
chr2 (767-831)||(2475857-2475926)
chr2 (763-800)||(13654786-13654823)
[»] chr4 (47 HSPs)
chr4 (623-825)||(52373779-52373981)
chr4 (623-870)||(25237572-25237815)
chr4 (623-888)||(4728537-4728785)
chr4 (657-825)||(49745080-49745249)
chr4 (628-871)||(2521792-2522051)
chr4 (622-737)||(10715769-10715884)
chr4 (622-737)||(10929539-10929654)
chr4 (623-888)||(46645582-46645830)
chr4 (623-737)||(2017326-2017440)
chr4 (623-737)||(4552298-4552412)
chr4 (623-737)||(40969337-40969451)
chr4 (706-831)||(41972393-41972518)
chr4 (657-831)||(50099875-50100063)
chr4 (620-710)||(10058656-10058746)
chr4 (623-737)||(32005996-32006110)
chr4 (625-731)||(43003075-43003181)
chr4 (623-736)||(9003669-9003782)
chr4 (625-710)||(31364254-31364339)
chr4 (727-841)||(36947543-36947657)
chr4 (623-737)||(2576285-2576399)
chr4 (623-745)||(50383979-50384100)
chr4 (767-831)||(31364170-31364234)
chr4 (734-825)||(8901844-8901934)
chr4 (774-888)||(14044336-14044449)
chr4 (774-863)||(9003571-9003659)
chr4 (767-888)||(10058516-10058636)
chr4 (623-712)||(14044462-14044551)
chr4 (627-707)||(41972335-41972415)
chr4 (623-710)||(11826937-11827024)
chr4 (625-712)||(32828281-32828368)
chr4 (655-737)||(1585782-1585864)
chr4 (763-851)||(31929044-31929132)
chr4 (617-712)||(9694204-9694297)
chr4 (774-871)||(9694094-9694191)
chr4 (767-831)||(10715690-10715755)
chr4 (767-831)||(10929460-10929525)
chr4 (767-888)||(2576150-2576271)
chr4 (767-823)||(4552228-4552284)
chr4 (767-831)||(40969259-40969323)
chr4 (774-871)||(11827039-11827135)
chr4 (635-692)||(36947650-36947707)
chr4 (685-738)||(43003156-43003209)
chr4 (767-831)||(2017454-2017518)
chr4 (622-673)||(6211530-6211581)
chr4 (776-831)||(50383923-50383978)
chr4 (623-673)||(12211086-12211136)
chr4 (617-671)||(55464512-55464566)
[»] chr5 (42 HSPs)
chr5 (623-865)||(12267272-12267513)
chr5 (623-865)||(13942642-13942886)
chr5 (657-863)||(767288-767490)
chr5 (623-871)||(21069003-21069247)
chr5 (635-831)||(36234456-36234652)
chr5 (623-831)||(15503950-15504175)
chr5 (623-871)||(15675307-15675539)
chr5 (726-871)||(16667458-16667603)
chr5 (623-858)||(35468910-35469129)
chr5 (623-737)||(14832700-14832814)
chr5 (623-736)||(16567904-16568017)
chr5 (623-737)||(2476477-2476591)
chr5 (726-871)||(17192634-17192779)
chr5 (623-731)||(1672376-1672484)
chr5 (622-831)||(30248999-30249192)
chr5 (638-736)||(32953572-32953670)
chr5 (624-737)||(6900879-6900992)
chr5 (623-736)||(7161973-7162086)
chr5 (623-710)||(33007025-33007112)
chr5 (623-737)||(34444078-34444193)
chr5 (623-710)||(34846485-34846572)
chr5 (623-736)||(43228532-43228645)
chr5 (767-858)||(33006914-33007005)
chr5 (774-888)||(43228655-43228768)
chr5 (767-888)||(34846345-34846465)
chr5 (774-871)||(37779670-37779767)
chr5 (623-712)||(37552051-37552140)
chr5 (623-712)||(37654881-37654970)
chr5 (623-712)||(37779780-37779869)
chr5 (774-888)||(32953680-32953793)
chr5 (774-863)||(37607471-37607560)
chr5 (623-712)||(37607573-37607662)
chr5 (623-799)||(8214528-8214701)
chr5 (774-888)||(7162096-7162209)
chr5 (774-871)||(16567797-16567894)
chr5 (767-831)||(34444000-34444064)
chr5 (774-871)||(1672499-1672596)
chr5 (623-672)||(25034985-25035034)
chr5 (763-794)||(13695094-13695125)
chr5 (787-865)||(37654800-37654878)
chr5 (623-660)||(6451758-6451795)
chr5 (769-822)||(7159609-7159662)
[»] chr8 (23 HSPs)
chr8 (694-864)||(13243095-13243265)
chr8 (623-858)||(36406378-36406597)
chr8 (685-831)||(34282832-34282978)
chr8 (625-724)||(35384256-35384355)
chr8 (623-864)||(3383908-3384133)
chr8 (625-733)||(27321753-27321861)
chr8 (623-731)||(28928178-28928286)
chr8 (726-862)||(39431638-39431774)
chr8 (623-713)||(24965148-24965238)
chr8 (623-712)||(38214863-38214952)
chr8 (638-713)||(34282764-34282839)
chr8 (767-831)||(24965067-24965131)
chr8 (767-825)||(28928099-28928158)
chr8 (657-826)||(31500736-31500907)
chr8 (763-822)||(21138071-21138130)
chr8 (706-747)||(12478246-12478287)
chr8 (635-682)||(13243298-13243345)
chr8 (623-673)||(21958779-21958829)
chr8 (696-737)||(39431591-39431632)
chr8 (623-673)||(5637568-5637618)
chr8 (623-660)||(24592197-24592234)
chr8 (782-831)||(27321882-27321931)
chr8 (774-831)||(38214793-38214850)
[»] chr6 (22 HSPs)
chr6 (634-871)||(2836067-2836321)
chr6 (629-864)||(9696057-9696276)
chr6 (625-792)||(34188856-34189023)
chr6 (623-851)||(2941237-2941449)
chr6 (624-864)||(15528948-15529172)
chr6 (623-864)||(15122045-15122270)
chr6 (623-743)||(10397698-10397818)
chr6 (622-831)||(23663647-23663840)
chr6 (626-871)||(9046807-9047036)
chr6 (616-831)||(34248895-34249094)
chr6 (623-731)||(14938811-14938919)
chr6 (623-736)||(28614293-28614406)
chr6 (622-728)||(2960794-2960900)
chr6 (623-733)||(31200045-31200156)
chr6 (624-710)||(1780933-1781019)
chr6 (623-737)||(31188201-31188315)
chr6 (623-712)||(339476-339565)
chr6 (753-830)||(339371-339448)
chr6 (767-830)||(1781039-1781102)
chr6 (767-824)||(10397809-10397866)
chr6 (774-821)||(14938934-14938981)
chr6 (813-888)||(28614434-28614508)
[»] chr1 (33 HSPs)
chr1 (623-871)||(14727324-14727556)
chr1 (623-824)||(34459150-34459347)
chr1 (657-888)||(48940328-48940553)
chr1 (623-831)||(27583906-27584094)
chr1 (623-743)||(27460785-27460904)
chr1 (618-737)||(25007576-25007695)
chr1 (625-737)||(37153881-37153993)
chr1 (623-737)||(44305524-44305638)
chr1 (623-831)||(9527079-9527283)
chr1 (621-717)||(33468858-33468954)
chr1 (625-831)||(4641928-4642151)
chr1 (638-831)||(6801988-6802181)
chr1 (715-830)||(24646088-24646203)
chr1 (628-799)||(49898442-49898609)
chr1 (627-737)||(1428312-1428422)
chr1 (623-736)||(4774085-4774198)
chr1 (715-843)||(24745434-24745562)
chr1 (767-871)||(31844637-31844741)
chr1 (767-871)||(6331680-6331784)
chr1 (623-710)||(6331804-6331891)
chr1 (623-710)||(31844530-31844617)
chr1 (621-831)||(25011424-25011617)
chr1 (623-710)||(8239411-8239498)
chr1 (767-871)||(8239285-8239391)
chr1 (767-831)||(27460730-27460794)
chr1 (627-702)||(24646195-24646270)
chr1 (767-831)||(37154007-37154071)
chr1 (767-831)||(44305446-44305510)
chr1 (768-831)||(25007498-25007561)
chr1 (767-821)||(44238875-44238929)
chr1 (684-737)||(44238791-44238844)
chr1 (787-831)||(4774041-4774085)
chr1 (624-673)||(3830102-3830151)
[»] scaffold0618 (2 HSPs)
scaffold0618 (623-737)||(1808-1922)
scaffold0618 (767-831)||(1730-1794)
[»] scaffold0075 (4 HSPs)
scaffold0075 (623-737)||(11636-11750)
scaffold0075 (635-737)||(7023-7124)
scaffold0075 (767-824)||(6952-7009)
scaffold0075 (767-824)||(11565-11622)
[»] scaffold0021 (3 HSPs)
scaffold0021 (623-865)||(112093-112329)
scaffold0021 (706-865)||(109255-109414)
scaffold0021 (657-703)||(109227-109273)
[»] scaffold0638 (2 HSPs)
scaffold0638 (623-710)||(4217-4304)
scaffold0638 (774-888)||(4089-4202)
[»] scaffold0015 (1 HSPs)
scaffold0015 (623-673)||(214019-214069)
[»] scaffold0108 (1 HSPs)
scaffold0108 (706-747)||(20937-20978)


Alignment Details
Target: chr7 (Bit Score: 389; Significance: 0; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 21 - 449
Target Start/End: Complemental strand, 4844683 - 4844242
Alignment:
Q  21 tgtgccagacccttgcttagctcaagctttggttcaagcaaatgaaat-----caaggttacctaaattcatgaagtttcagtataatatcaattcacaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  4844683 tgtgccagacccttgcttagctcaagctttggttcaagcaaatgaaatgaaatcaaggttacctaaattcatgaagtttcagtataatatcaattcacaa 4844584  T
Q  116 ctccttgagtgcaattatctttgaacctaggtaccagtagaacgaatttcttctacacggaaagtgttgcttcgaagtgttgccggtgcaattgccatgc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4844583 ctccttgagtgcaattatctttgaacctaggtaccagtagaacgaatttcttctacacggaaagtgttgcttcgaagtgttgccggtgcaattgccatgt 4844484  T
Q  216 tagacgtattctagaaacgtaagtgcttagtaaacgg--------taacatctcatggttaatcagtattactcgttcgttaataagcaagacaaagatg 307  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4844483 tagacgtattctagaaacgtaagtgcttagtaaacggtaaacacataacatctcatggttaatcagtattactcgttcgttaataagcaagacaaagatg 4844384  T
Q  308 aattgaagttaaaagaggtcatcttgaaagatcacacatatatgcctctataaaatcaaaatccattagcataaacaatttgaggcagaaaatgtagaag 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4844383 aattgaagttaaaagaggtcatcttgaaagatcacacatatatgcctctataaaatcaaaatccattagcataaacaatttgaggcagaaaatgtagaag 4844284  T
Q  408 acaccaagaagagcatataatgagataaaatttggatttgaa 449  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4844283 acaccaagaagagcatataatgagataaaatttggatttgaa 4844242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 502 - 893
Target Start/End: Complemental strand, 4843667 - 4843276
Alignment:
Q  502 gaaactatgttagaattgttgttcaataattcaaattttgcagcagagagttgcagaaaacatctattgtcaaacactataagcagaaaattataccatg 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4843667 gaaactatgttagaattgttgttcaataattcaaattttgcagcagagagttgcagaaaacatctattgtcaaacactataagcagaaaattataccatg 4843568  T
Q  602 aaagtattttgtagcatatctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttc 701  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  4843567 aaagtattttgtagcatatctagtggcggagacaagaattttatagagcttgagcaaaaaatttatcgcaaaacgttacttctttcctgcgaataatttc 4843468  T
Q  702 acatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatg 801  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4843467 acatttcctgcggataatttcacatttcctgcggatcctaaaatcccaatgtattacctcacctgggaacctaaatccttggcaaaatctgcatgaaatg 4843368  T
Q  802 tgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaattgtg 893  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  4843367 tgtttcatgcggaatgtacacaaatatccgtaggtaaatccgaaggaaaagctaaaagttctagaaatgggtctgacttcctacaaattgtg 4843276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 623 - 888
Target Start/End: Complemental strand, 3012548 - 3012288
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||  || |||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||| |||| | ||    
T  3012548 agtggcggagccagaaattttatagagtctgggcaaaaaaattattgcaaaacgttacttccttcctgtgaataatttcacatttcctgcggata-tatc 3012450  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       |||||||||||||||||||||| |  |||||||||| |||||||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||    
T  3012449 ---tttcctgcggatcctaaaatcctatggtattacctcacctgggaacctatatccttggcaaaatctgcaggaagtgtgtttcctgcggaatgtacac 3012353  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    ||| ||| | ||||||||||| ||||||| ||||||||||||| ||| |||  |||||||||||||    
T  3012352 aaaaatcggcaggtaaatccgcaggaaaagctaaaagttctagtaat-ggttgggcttgctacaaa 3012288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 623 - 841
Target Start/End: Complemental strand, 19377638 - 19377419
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacattt-cctgcagataattt 721  Q
    |||||| ||| || ||||| |||||||  || |||||||| |||||||||||  |||  || ||||||||||||||||||||||| ||||| ||||||||    
T  19377638 agtggcagagccaagaattatatagagtctgggcaaaaaaattatcgcaaaatgttatgtctttcctgcgaataatttcacattttcctgcggataattt 19377539  T
Q  722 cacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    |||||||||||||||||||||||||| || |||||||||| ||| || ||||||||||||||||||||||||| ||||||| |||| | |||||||| ||    
T  19377538 cacatttcctgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaatctgcaggaaatgtatttccttcggaatttcca 19377439  T
Q  822 caaatatccgtaggtaaatc 841  Q
    |||| ||||| |||||||||    
T  19377438 caaacatccgcaggtaaatc 19377419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 623 - 844
Target Start/End: Original strand, 28693892 - 28694134
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatt---------------- 706  Q
    |||| ||||| ||||||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||||||||||||||                    
T  28693892 agtgacggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggataatttc 28693991  T
Q  707 -----tcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatg 801  Q
         |||||| |||||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  28693992 acaaatcctgcggataatttcacatttcctgcggatcctaaaatcctatggtattacctcacctgggaacctaaatcctgggcaaaatctgcaggaaatg 28694091  T
Q  802 tgtttcatgcggaatttacacaaatatccgtaggtaaatccga 844  Q
    |||||| ||| ||||||||||||| ||||| || |||||||||    
T  28694092 tgtttcctgcagaatttacacaaaaatccgcagctaaatccga 28694134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 623 - 835
Target Start/End: Original strand, 814862 - 815070
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||| |||||||  || |||||||| |||||||||||| ||||||| ||||||| ||||||||||||||| |||| |||| | ||    
T  814862 agtggcggagccaggaattatatagagtctgggcaaaaaaattatcgcaaaacgttacttcattcctgctaataatttcacattttctgcggata-tatc 814960  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       |||| ||| ||||||||||| | || |||||||||| | ||||||||||||| |||||||||||||||| ||||||| |||  ||||||||||||||    
T  814961 ---tttcgtgcagatcctaaaattctaaggtattacctcacttgggaacctaaattcttggcaaaatctgcaagaaatgtattttctgcggaatttacac 815057  T
Q  823 aaatatccgtagg 835  Q
    ||| |||||||||    
T  815058 aaaaatccgtagg 815070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 623 - 888
Target Start/End: Original strand, 35300317 - 35300565
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||| |||    
T  35300317 agtggcggagccaggaattttatagagcttgggaaaaaaatttatcgtaaaacgttacttccttcttacgaataatttcacatttcctgcagataaattc 35300416  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| |||||||||||||||||||||||||||| |||||   |||| |||||||||||||    
T  35300417 acatttcctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttaca 35300499  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    |||| ||||| ||||||||||| ||||||| |||||  |||||| ||| |||  |||||||||||||    
T  35300500 caaaaatccgcaggtaaatccgcaggaaaagctaaacattctagtaat-ggtagggcttgctacaaa 35300565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 622 - 829
Target Start/End: Original strand, 21932630 - 21932858
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagata---- 717  Q
    ||||||||||| ||||||||||||||||  || ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||||        
T  21932630 tagtggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttctttcctgcgaataatttcatatttcctgcagataattt 21932729  T
Q  718 -----------------atttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaat 800  Q
                     |||||||| ||| ||||||||| ||||||| |  |||||||||| ||||| |||||||||||||| ||||||||||| |||||    
T  21932730 tatatttcctgcggataatttcacaattcatgcggatccaaaaatcctatggtattacctcacctggaaacctaaatccttgacaaaatctgcaggaaat 21932829  T
Q  801 gtgtttcatgcggaatttacacaaatatc 829  Q
    ||||||| |||||||||||||||||||||    
T  21932830 gtgtttcctgcggaatttacacaaatatc 21932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 655 - 857
Target Start/End: Original strand, 38128902 - 38129100
Alignment:
Q  655 gcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgta 754  Q
    ||||||| ||||||||||||| ||| |||||||||||  |||||||||||||||||||| ||| | ||   |||||||||||||||||||||| |   ||    
T  38128902 gcaaaaattttatcgcaaaacgttatttccttcctgcagataatttcacatttcctgcacata-tatc---tttcctgcggatcctaaaatcctatgata 38128997  T
Q  755 ttacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaact 854  Q
    || |||| ||||||||||||||||||||||||||| |||| |||||||||||| | | ||||||||||||| ||||| ||||||| | | |||||||| |    
T  38128998 ttgcctcacctgggaacctaaatccttggcaaaatatgcaggaaatgtgtttccttcagaatttacacaaaaatccgcaggtaaaactgcaggaaaaatt 38129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 629 - 851
Target Start/End: Original strand, 23704364 - 23704570
Alignment:
Q  629 ggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacattt 728  Q
    |||| |||||||||||||||| |||   ||||||||||||| ||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  23704364 ggagtcaggaattttatagagtttggataaaaaatttatcgtaaaacgttacttctttcttgcgaataattttacatttcctgcagataatttcacattt 23704463  T
Q  729 cctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaata 827  Q
    ||| |||||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||||| |    
T  23704464 cctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgttttcggcggaatttacacaaaaa 23704546  T
Q  828 tccgtaggtaaatccgaaggaaaa 851  Q
    |||  ||||||||||| |||||||    
T  23704547 tccacaggtaaatccgcaggaaaa 23704570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 623 - 736
Target Start/End: Original strand, 22206575 - 22206688
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  || ||||||||||||| || |||| ||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||    
T  22206575 agtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctc 22206674  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  22206675 acatttcctgcgga 22206688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 623 - 736
Target Start/End: Complemental strand, 22228164 - 22228051
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  || ||||||||||||| || |||| ||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||    
T  22228164 agtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctc 22228065  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  22228064 acatttcctgcgga 22228051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 623 - 708
Target Start/End: Original strand, 26722848 - 26722933
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttc 708  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26722848 agtggcagagtcaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 26722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 21688375 - 21688149
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||||||||||   |  |||||||||||||| |||||  ||||| |  | ||| |||||||||||||||||||||||||||||||    
T  21688375 agtggcggagtcaggaattttatagaatctaggcaaaaaatttatcacaaaatgttactgctattctgtgaataatttcacatttcctgcagataatttc 21688276  T
Q  723 acattt------------------cctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgt 804  Q
    ||||||                  |||||||||| |||||||| || |||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||    
T  21688275 acattttaatacggatatatctttcctgcggatcttaaaatcctaaggtattatctcacctgataacctaaatccttcgcaaaatctgcaggaaatgtgt 21688176  T
Q  805 ttcatgcggaatttacacaaatatccg 831  Q
    ||| ||||||||||||||||| |||||    
T  21688175 ttcctgcggaatttacacaaaaatccg 21688149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 623 - 733
Target Start/End: Original strand, 5991309 - 5991419
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| | | ||||||||||||| || |||||||| |||||||||||  |||||||||||||||||||||||| ||||||| ||| |||||||||    
T  5991309 agtggcggagtcggaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataattttacatttcttgcggataatttc 5991408  T
Q  723 acatttcctgc 733  Q
    |||||||||||    
T  5991409 acatttcctgc 5991419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 623 - 790
Target Start/End: Original strand, 41862235 - 41862398
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||||||||||   |||| |||||||||||||||||||| |||||| || ||||| ||||||  ||||||||||| ||||         
T  41862235 agtggcggagccaggaattttatagaatctgagtaaaaaatttatcgcaaaacaatacttcatttctgcggataattatacatttcctgcggata----t 41862330  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatc 790  Q
    || ||||||| |||||||||||||| || ||| ||||||  ||| |||||||||||||||||||||||    
T  41862331 acctttcctgtggatcctaaaatcctaaggtaatacctcatctgagaacctaaatccttggcaaaatc 41862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 638 - 825
Target Start/End: Original strand, 42439466 - 42439649
Alignment:
Q  638 aattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggat 737  Q
    |||||||||| |  || ||||||||||||||||||||| ||||||| || || ||||||||||||||||| || | |||| | ||   |||| | || ||    
T  42439466 aattttatagggtctgggcaaaaaatttatcgcaaaacgttacttcttttctacgaataatttcacattttctacggata-tatc---tttcatacgcat 42439561  T
Q  738 cctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
     ||||||| | |  |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  42439562 tctaaaattctatggtattacctctcctaggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcgaaatttacacaaa 42439649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 767 - 871
Target Start/End: Original strand, 26722955 - 26723059
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||||| |||||| ||||||     
T  26722955 ggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaatccgcaggtaaatccgtaggaaaagctaaaatttctagt 26723054  T
Q  867 aatgg 871  Q
    |||||    
T  26723055 aatgg 26723059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 767 - 888
Target Start/End: Original strand, 41759625 - 41759745
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||  | ||||||| | | ||||| |||||||||||||     
T  41759625 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacaccaaaatccacaagtaaatctgcaagaaaagctaaaagttctagt 41759724  T
Q  867 aatgggtctggcttgctacaaa 888  Q
    ||||| |  |||||||||||||    
T  41759725 aatggct-gggcttgctacaaa 41759745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 774 - 888
Target Start/End: Original strand, 5991432 - 5991542
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||   ||| ||||||||||| ||||||||||||||||||||| ||||| |    
T  5991432 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaa---ccgcaggtaaatccgcaggaaaaactaaaagttctagtaatggct 5991528  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  5991529 -gggcttgctacaaa 5991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 638 - 729
Target Start/End: Original strand, 7873124 - 7873215
Alignment:
Q  638 aattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttc 729  Q
    ||||||||||||  || |||||||| |||||||||||  |||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  7873124 aattttatagagtctgggcaaaaaaattatcgcaaaatgttacttccttcccgctaataatttcacatttcctgcggataatttcacatttc 7873215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 774 - 888
Target Start/End: Original strand, 7873232 - 7873345
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| | ||| ||||||||||| || |||| ||||||||||||| ||| |||    
T  7873232 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaacccgcaggtaaatccgcagaaaaagctaaaagttctagtaat-ggt 7873330  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  7873331 tgggcttgctacaaa 7873345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 634 - 743
Target Start/End: Original strand, 38991077 - 38991186
Alignment:
Q  634 caggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgc 733  Q
    ||||||||||||||||   |  ||||||| |||||||||||| |||  | ||||||||||||||||||| ||||||| |  |||||||||||||| ||||    
T  38991077 caggaattttatagagtccggacaaaaaagttatcgcaaaacgttatcttcttcctgcgaataatttcatatttcctacgaataatttcacattttctgc 38991176  T
Q  734 ggatcctaaa 743  Q
    ||||||||||    
T  38991177 ggatcctaaa 38991186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 380 - 443
Target Start/End: Complemental strand, 4709837 - 4709774
Alignment:
Q  380 aaacaatttgaggcagaaaatgtagaagacaccaagaagagcatataatgagataaaatttgga 443  Q
    ||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  4709837 aaacaatttgatgcagaaaatatacaagacaccaggaagagcatataatgagataaaatttgga 4709774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 637 - 703
Target Start/End: Original strand, 41759530 - 41759596
Alignment:
Q  637 gaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcac 703  Q
    |||||||||||||  || ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  41759530 gaattttatagagtctgggcaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcac 41759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 625 - 712
Target Start/End: Original strand, 25688102 - 25688189
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||| ||| ||||||||||||| || | |||||| |||||| ||||  |||||||||| ||| |||||||||||||||||||||    
T  25688102 tggcggagccagaaattttatagagcctgggtaaaaaaattatcgtaaaatgttacttcctttctgtgaataatttcacatttcctgc 25688189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 785 - 858
Target Start/End: Original strand, 22206709 - 22206782
Alignment:
Q  785 aaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaa 858  Q
    |||||||||| |||||||||||| ||||||||||||| ||| |  |||||||||||||| ||||||| ||||||    
T  22206709 aaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaaaagctaaaa 22206782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 785 - 858
Target Start/End: Complemental strand, 22228030 - 22227957
Alignment:
Q  785 aaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaa 858  Q
    |||||||||| |||||||||||| ||||||||||||| ||| |  |||||||||||||| ||||||| ||||||    
T  22228030 aaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaaaagctaaaa 22227957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 871
Target Start/End: Original strand, 25688202 - 25688299
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| ||||||||||||| ||||| |||||| ||||||||||||| ||| ||  | ||||||||| | ||||||| ||||||||| ||| |||||    
T  25688202 aaatcctaggcaaaatctgcaggaaatatgtttcctgcggaatttacataaacatttgcaggtaaatctgcaggaaaagctaaaagttttagtaatgg 25688299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 4709906 - 4709851
Alignment:
Q  31 ccttgcttagctcaagctttggttcaagcaaatgaaatcaaggttacctaaattca 86  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||    
T  4709906 ccttgcttagctcatgctttagttcaagcaaatgaaatcaaagttatctaaattca 4709851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 657 - 712
Target Start/End: Complemental strand, 30852502 - 30852447
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||| |||||||||||  || |||||||||||||||||||||||||||||||||    
T  30852502 aaaaaaattatcgcaaaatgttgcttccttcctgcgaataatttcacatttcctgc 30852447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 831
Target Start/End: Original strand, 38991181 - 38991241
Alignment:
Q  771 cctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||| ||||| |||||    
T  38991181 cctaaatccttggcaaaatctgcaggaaatgtgtttccaacggaatttatacaaaaatccg 38991241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 669
Target Start/End: Original strand, 38575128 - 38575174
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcg 669  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  38575128 agtggcggagccaggaatttcatagagcctgagcaaaaaatttatcg 38575174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 821
Target Start/End: Complemental strand, 30852434 - 30852387
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||||    
T  30852434 aaatcctaggcaaaatctgaaggaaatgtgtttcctgcggaatttaca 30852387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 673
Target Start/End: Complemental strand, 19400297 - 19400247
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    |||||||||| ||| ||||||||||||| || ||||||| |||||||||||    
T  19400297 agtggcggagccagaaattttatagagcctgggcaaaaagtttatcgcaaa 19400247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 673
Target Start/End: Original strand, 22937702 - 22937752
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    |||||||||| ||||||||  ||||||| ||||| ||||||||||||||||    
T  22937702 agtggcggagccaggaattacatagagcctgagcgaaaaatttatcgcaaa 22937752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 672
Target Start/End: Original strand, 27387166 - 27387215
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaa 672  Q
    |||||||||| ||| ||||| ||||||| || ||||||||||||||||||    
T  27387166 agtggcggagccagaaatttcatagagcctgggcaaaaaatttatcgcaa 27387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 1e-80; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 623 - 871
Target Start/End: Original strand, 41218244 - 41218492
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  41218244 agtggcggagtcaggaattttatagagtctaggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttt 41218343  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||||||||||||||||||||| || |||||||||| | || |||||||||| |||||||||||| ||| |||||||||||| ||||||||||| ||    
T  41218344 acatttcctgcggatcctaaaatcctaaggtattacctcacatgagaacctaaattcttggcaaaatcggcaggaaatgtgtttcctgcggaatttagac 41218443  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||| || || | ||||||||| ||||||| ||||||||||||| |||||    
T  41218444 aaaaatgcgcaagtaaatccgcaggaaaagctaaaagttctagtaatgg 41218492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 625 - 825
Target Start/End: Original strand, 33178983 - 33179199
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||||||||||||||||  || ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33178983 tggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacattttctgcagataatttcac 33179082  T
Q  725 atttcctgcg----------------gatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttca 808  Q
    |||| |||||                ||||||||||||| |  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||     
T  33179083 attttctgcggatatatctttcctgcgatcctaaaatcctatggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcc 33179182  T
Q  809 tgcggaatttacacaaa 825  Q
    |||||||||||||||||    
T  33179183 tgcggaatttacacaaa 33179199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 625 - 888
Target Start/End: Complemental strand, 7501186 - 7500940
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||||||||||||||||| |    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  7501186 tggcggagccaggaattttatagagcctcgataaaaaatttatcgcaaaacgttacttacttcctgcgaataatttcacatttcctgcagataatttcac 7501087  T
Q  725 atttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacaca 823  Q
    ||||||| |||||                  || || ||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  7501086 atttcctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacaca 7501004  T
Q  824 aatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    || ||||| | ||||||||| ||||||| |||||| |||||| ||| |||  |||||||||||||    
T  7501003 aacatccgcatgtaaatccgcaggaaaagctaaaaattctagtaat-ggttgggcttgctacaaa 7500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 28311509 - 28311395
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  28311509 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctacgaataatttcacatttcctgcagataaattc 28311410  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  28311409 acatttcctacggat 28311395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 14461297 - 14461183
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| || |||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| |||    
T  14461297 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcacaaaacgttacttccttcctacgaataattttacatttcctgcagataaattc 14461198  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  14461197 acatttcctacggat 14461183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 623 - 730
Target Start/End: Original strand, 43700082 - 43700189
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| |||||||||||||||| | ||||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  43700082 agtggcggagtcagaaattttatagagcttgggtaaaaaatatatcgcaaaacgttacttcttttctgcgaataatttcacatttcctgcagataatttc 43700181  T
Q  723 acatttcc 730  Q
    ||||||||    
T  43700182 acatttcc 43700189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 625 - 737
Target Start/End: Complemental strand, 53652128 - 53652016
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||||||||||||||||  ||  ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||||    
T  53652128 tggcggagccaggaattttatagagtctggacaaaaaatttatcgcaaaacattacgttcttcctacgaataatttcacatttcctgcagataaattcac 53652029  T
Q  725 atttcctgcggat 737  Q
    ||||||| |||||    
T  53652028 atttcctacggat 53652016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 12910058 - 12909946
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||| |||||| |||    
T  12910058 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaatcgttacttccttcc--cgaataatttcacatttcctgtagataaattc 12909961  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  12909960 acatttcctacggat 12909946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 37516853 - 37516766
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37516853 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 37516766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 706 - 864
Target Start/End: Original strand, 41358570 - 41358729
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtt 805  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| || |||||||||| |||| ||||||||||| ||||||||||| ||| ||||||||||    
T  41358570 ttcctgcggataattgcacatttcctgcggatccaaaaatcctaaggtattacctcacctgagaacctaaatcattggcaaaatccgcaggaaatgtgtt 41358669  T
Q  806 tcatgcggaa-tttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    |   | |||| |||||||||||||||| | ||||||||| ||||||| | | ||||||||    
T  41358670 tttggaggaattttacacaaatatccgcaagtaaatccgtaggaaaagcgagaagttcta 41358729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 622 - 710
Target Start/End: Original strand, 26370930 - 26371018
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    ||||||||||| ||||||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26370930 tagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 26371018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 25391734 - 25391821
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  25391734 agtggcagagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacattacttccttcttacgaataatttcacatttcct 25391821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 767 - 871
Target Start/End: Original strand, 26371038 - 26371142
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||  |||||| ||||||     
T  26371038 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcagaaaatgctaaaatttctagt 26371137  T
Q  867 aatgg 871  Q
    |||||    
T  26371138 aatgg 26371142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 44047815 - 44047702
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||||| |||||  ||  |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| |||    
T  44047815 agtggcggagccaggaatttt-tagagtctggacaaaaaatttatcgcaaaacgttacttctttcctacaaataatttcacatttcctgcagataaattc 44047717  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  44047716 acatttcctacggat 44047702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 767 - 871
Target Start/End: Complemental strand, 37516746 - 37516642
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||  |||| ||||||||||| ||||||| |||||| ||||||     
T  37516746 ggaacctagatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaattccgcaggtaaatccgcaggaaaagctaaaaattctagt 37516647  T
Q  867 aatgg 871  Q
    |||||    
T  37516646 aatgg 37516642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 691 - 831
Target Start/End: Complemental strand, 53068418 - 53068282
Alignment:
Q  691 cgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatc 790  Q
    ||||||||||||||||| |||| ||||  ||    ||| ||||| |||||||||||| || |||||| ||| ||| ||||||||||| ||||||||||||    
T  53068418 cgaataatttcacattttctgcggatatatt----tttactgcgaatcctaaaatcctaaggtattatctcacctaggaacctaaattcttggcaaaatc 53068323  T
Q  791 tgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||| |||||||||||| || |||||||||||||| |||||    
T  53068322 tgcaggaaatgtgtttcctgtggaatttacacaaaaatccg 53068282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 774 - 871
Target Start/End: Complemental strand, 26278460 - 26278363
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||||||| ||| ||||||||||||||||| | ||||| |||||| |||||| |||||    
T  26278460 aaatcctaggcaaaatctgcaggaaatgtgtttcctccggaatttacataaaaatccgtaggtaaatccgcatgaaaagctaaaaattctagtaatgg 26278363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 53988064 - 53987974
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagc-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||||| ||| ||||||||||||   | || ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  53988064 agtggcggagccagaaattttatagagtccgggcaaaaaaatttattgcaaaatgttacttccttcctgcgaataatttcacatttcctgc 53987974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 774 - 863
Target Start/End: Complemental strand, 35077321 - 35077232
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttct 863  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| || |  ||||||||||| || |||| |||||||||||    
T  35077321 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcccaggtaaatccgcagaaaaagctaaaagttct 35077232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 26278562 - 26278475
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    ||||||||||  || |||||||||||| ||  |||||||| |||||||||||   |||||||||| ||||||||||||||||||||||    
T  26278562 agtggcggagcaagaaattttatagagtttaggcaaaaaaattatcgcaaaatgatacttccttcttgcgaataatttcacatttcct 26278475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 768 - 831
Target Start/End: Complemental strand, 53652001 - 53651938
Alignment:
Q  768 gaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||| |||||    
T  53652001 gaacctaaatccttggcaaaatctgcaggaaatgcatttcctgcggaatttacacaaaaatccg 53651938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 44047688 - 44047624
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||   |||| ||||||||||||||||| |||||    
T  44047688 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccg 44047624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 53987961 - 53987904
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| |||||    
T  53987961 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaatccg 53987904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 831
Target Start/End: Original strand, 25391841 - 25391905
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||| |||| |||||   |||| ||||||||||||||||| |||||    
T  25391841 ggaacctaaatccttggcaaaatttgcaagaaatacatttcttgcggaatttacacaaaaatccg 25391905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 28311381 - 28311317
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||||| || |||||   |||| ||||||||||||||||| |||||    
T  28311381 ggaacctaaatccttggcaaaatctacaggaaatacatttcctgcggaatttacacaaaaatccg 28311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 712
Target Start/End: Original strand, 41358541 - 41358597
Alignment:
Q  656 caaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||||| |||||||||||| ||| |||||||||||| |||||| ||||||||||||    
T  41358541 caaaaaaattatcgcaaaacgttatttccttcctgcggataattgcacatttcctgc 41358597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 822
Target Start/End: Complemental strand, 38239555 - 38239502
Alignment:
Q  769 aacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    |||||||||||||||||||||| |||  ||||||||||| ||| ||||||||||    
T  38239555 aacctaaatccttggcaaaatccgcagaaaatgtgtttcctgcagaatttacac 38239502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 14461169 - 14461105
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| || ||   |||| ||||||||||||| ||| |||||    
T  14461169 ggaacctaaatccttggcaaaatctgcaggacatacatttcctgcggaatttacataaaaatccg 14461105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 745
Target Start/End: Original strand, 41199866 - 41199905
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaat 745  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  41199866 ttcctgcggataattgcacatttcctgcggatcctaaaat 41199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 807
Target Start/End: Complemental strand, 43447663 - 43447620
Alignment:
Q  764 ctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttc 807  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||    
T  43447663 ctgggaagctaaatccttggcaaaatctgcaggaaacgtgtttc 43447620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 765 - 831
Target Start/End: Complemental strand, 36870025 - 36869959
Alignment:
Q  765 tgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||| |||||||   | |||| | ||||| |||||||||||||||| ||||||    
T  36870025 tgggaacctaaatccttgacaaaatccttaggaaacgggtttcctgcggaatttacacaagtatccg 36869959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 9600447 - 9600390
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||  |||||||||||| |||||||||||| ||| ||||||||| ||| |||||    
T  9600447 aaatcctaagcaaaatctgcaggaaatgtgtttcctgcagaatttacataaaaatccg 9600390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 2e-73; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 623 - 839
Target Start/End: Complemental strand, 17149023 - 17148808
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  || |||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17149023 agtggcggagctagaaattttattgagcttgggcaaaaaatttatctcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataattcc 17148924  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||||||||||||||||||||| |  ||||| |||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  17148923 acatttcctgcggatcctaaaatcctatggtattccctcacctgggaacctaaatcctt-gcaaaatctgcaggaaatgtgtttcctgcggaatttacac 17148825  T
Q  823 aaatatccgtaggtaaa 839  Q
    ||| ||||| |||||||    
T  17148824 aaaaatccgcaggtaaa 17148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 685 - 888
Target Start/End: Complemental strand, 25563116 - 25562914
Alignment:
Q  685 ttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggc 784  Q
    |||||||  ||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |  |||||||||| ||||||||||||||||||||||    
T  25563116 ttcctgcagataatttcacatttcctggggataatttcacatttcctgtggatcctaaaatcctatggtattacctcacctgggaacctaaatccttggc 25563017  T
Q  785 aaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgcta 884  Q
    |||||||||| ||||||| |||| ||||||||||||| ||  ||||| || |||||||| ||||||| ||||||||||||| ||| |||  |||||||||    
T  25563016 aaaatctgcaggaaatgtatttcctgcggaatttacaaaacaatccgcagataaatccgcaggaaaagctaaaagttctagtaat-ggttgggcttgcta 25562918  T
Q  885 caaa 888  Q
    ||||    
T  25562917 caaa 25562914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 623 - 830
Target Start/End: Complemental strand, 17249557 - 17249354
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || |||||| |||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||| | ||    
T  17249557 agtggcggagtcaggaattttatagagtctgggcaaaatatttatagcaaaacgttactttcttcctgcgaataatttcacatttcctgcggata-tatc 17249459  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       |||  ||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||| || |||||||||||| || |||||||||||    
T  17249458 ---tttaatgcggatcctaaaatcctaaggtattacctcacctgagaacctaaatccttggcaaaatctacaagaaatgtgtttcctgtggaatttacac 17249362  T
Q  823 aaatatcc 830  Q
    ||| ||||    
T  17249361 aaaaatcc 17249354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 623 - 737
Target Start/End: Original strand, 41114758 - 41114872
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  41114758 agtggaggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcatgcgaataatttcacatttcctgcagataatttc 41114857  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  41114858 acatttcctacggat 41114872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 623 - 824
Target Start/End: Original strand, 303980 - 304198
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| |||||||||||| ||| |||||||| |||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||    
T  303980 agtggcggagccagaaattttatagagtttgggcaaaaaaattatcgcaaaacgttacttcttatctgcgaataatttcacatttcctgcagataatttc 304079  T
Q  723 aca-----------------tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtt 805  Q
    |||                 |||||||||||||||||||||  |  || ||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  304080 acatttcctgcggatatatctttcctgcggatcctaaaatcttatggtgttacctcacatgggaacctaaatccttggcaaaatctgcaagaaatgtgtt 304179  T
Q  806 tcatgcggaatttacacaa 824  Q
    || |||| |||||||||||    
T  304180 tcctgcgaaatttacacaa 304198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 13203994 - 13203802
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | ||||||||||||    
T  13203994 agtggcggagccaggaattttatagagcatgagcaaaaaatttatcgcaaaatgttacttccttccagcgaataatttcacattttccgcagataatttc 13203895  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||      |||            || ||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  13203894 acatttcctacggat------atc-----------tctttcctgcggaacctaaatccttggcaaaatctgcaggaaacgtgtttcctgcggaatttaca 13203812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 29257593 - 29257479
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||    
T  29257593 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttc 29257494  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  29257493 acatttcctacggat 29257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 623 - 831
Target Start/End: Original strand, 6799774 - 6799966
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  |||||||||||||||| || |||||   |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  6799774 agtggcggagctaggaattttatagagcctgggcaaattttttatcacaaaacgttagttccttcctgcgaataatttcacatttcctgcagataatttc 6799873  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6799874 acatttcctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 6799956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 623 - 825
Target Start/End: Complemental strand, 12000784 - 12000564
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacattt-cctgcagataattt 721  Q
    |||||||||| |||||||| |||||||| |  |||||||| |||||||||||  |||| ||||||||||||||||||| |||||| || || ||||||||    
T  12000784 agtggcggagccaggaattatatagagcctaggcaaaaaaattatcgcaaaatgttacgtccttcctgcgaataattttacattttccggcggataattt 12000685  T
Q  722 cacatttcctgcggat-----------------cctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgt 804  Q
    ||||||||||||||||                 |||||||||| || |||||||||| ||| || ||||| ||||||||||||||||||| |||||||||    
T  12000684 cacatttcctgcggatatatctttcctgcggatcctaaaatcctaaggtattacctcacctagggacctatatccttggcaaaatctgcaggaaatgtgt 12000585  T
Q  805 ttcatgcggaatttacacaaa 825  Q
    ||| |||||||||||||||||    
T  12000584 ttcctgcggaatttacacaaa 12000564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 635 - 737
Target Start/End: Complemental strand, 41010727 - 41010625
Alignment:
Q  635 aggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcg 734  Q
    |||||||||||||||  ||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  41010727 aggaattttatagagtgtggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagaaaatttcacatttcctacg 41010628  T
Q  735 gat 737  Q
    |||    
T  41010627 gat 41010625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 641 - 731
Target Start/End: Original strand, 18299049 - 18299139
Alignment:
Q  641 tttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcct 731  Q
    |||||| || ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18299049 tttataaagtttgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcct 18299139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 2476033 - 2475944
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||| ||| ||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2476033 agtggcagagtcaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgc 2475944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 714 - 831
Target Start/End: Complemental strand, 41010627 - 41010510
Alignment:
Q  714 gataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcgg 813  Q
    |||||||||||||||||||||||||||||||||     |||||||||| | ||||||||||||||||| | |||||||||| |||||||||||| ||| |    
T  41010627 gataatttcacatttcctgcggatcctaaaatcttgtggtattacctcacatgggaacctaaatccttagtaaaatctgcaggaaatgtgtttcctgcag 41010528  T
Q  814 aatttacacaaatatccg 831  Q
    |||||| ||||| |||||    
T  41010527 aatttatacaaaaatccg 41010510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 657 - 779
Target Start/End: Original strand, 45444376 - 45444494
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtatt 756  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||   |||| ||| ||||||||||||| |  |||||    
T  45444376 aaaaaatttattgcaaaacattacttccttcctgcgaataatttcacatttcctgtagat-atatc---tttcttgcagatcctaaaatcctatggtatt 45444471  T
Q  757 acctctcctgggaacctaaatcc 779  Q
    ||||| |||| ||||||||||||    
T  45444472 acctcacctgtgaacctaaatcc 45444494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 22572610 - 22572697
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||| ||| ||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  22572610 agtggcggagccaggaattttataaagcctggacaaaaaatttatcgcaaaacgttactttcttcctgcgaataatttcacatttcct 22572697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 825
Target Start/End: Complemental strand, 15651433 - 15651248
Alignment:
Q  658 aaaaatttatcgcaaaacattacttccttcctgcgaataatttcacattt-cctgcagataatttcacatttcctgcggat-----------------cc 739  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||                 ||    
T  15651433 aaaaatttatcgcaaaatgttacgtccttcctgcgaataattttacattttcctgcggataatttcacatttcctggggatatatctttcctactgatcc 15651334  T
Q  740 taaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||||||| || | |||||||| ||| || ||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||    
T  15651333 taaaatcctaaggcattacctcacctagggacctaaatccttggcaaaatacgcaggaaatgtgtttcctgcggaatttacacaaa 15651248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 625 - 799
Target Start/End: Original strand, 16220919 - 16221089
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||| ||||||||||||| || |||||||| |||||||||||| ||| |||||| ||||  |||||| ||||||| |||  ||||     ||    
T  16220919 tggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttatttcctttctgcatataattgcacattttctgtggata----tac 16221014  T
Q  725 atttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaa 799  Q
     |||||||| ||||||||||||| || |||||| ||| ||||||||| ||||||||| |||||||| ||| ||||    
T  16221015 ctttcctgcagatcctaaaatcctaaggtattatctcacctgggaacttaaatccttagcaaaatccgcaggaaa 16221089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 710 - 825
Target Start/End: Original strand, 33909301 - 33909416
Alignment:
Q  710 tgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcat 809  Q
    |||| |||||||||||||||||| |||||||||||||| |  |||||||||| |||| ||||||||||| |||| |||||||||| ||||||| | || |    
T  33909301 tgcaaataatttcacatttcctgtggatcctaaaatcctatggtattacctcacctgagaacctaaatctttggaaaaatctgcaggaaatgtttctcct 33909400  T
Q  810 gcggaatttacacaaa 825  Q
    || |||||| ||||||    
T  33909401 gcagaattttcacaaa 33909416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 767 - 831
Target Start/End: Original strand, 18299159 - 18299223
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  18299159 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccg 18299223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 767 - 831
Target Start/End: Original strand, 41114886 - 41114950
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||    
T  41114886 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacgaaaatccg 41114950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 22572717 - 22572775
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  22572717 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctggggaatttacacaaa 22572775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 29257465 - 29257401
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||| ||||| |||||||||||||||| |||||||||||| |||| |||||||||||| |||||    
T  29257465 ggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaaaaatccg 29257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 623 - 711
Target Start/End: Original strand, 33909235 - 33909323
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctg 711  Q
    |||||||| | ||| ||||||||||||  || ||||||| ||||||||||||  |||| |||||| ||| |||||||||||||||||||    
T  33909235 agtggcggggtcagaaattttatagagtctgggcaaaaactttatcgcaaaatgttacatccttcatgcaaataatttcacatttcctg 33909323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 763 - 851
Target Start/End: Complemental strand, 34756794 - 34756706
Alignment:
Q  763 cctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaa 851  Q
    ||||||||||||||||||||||||||||  || |||| ||| ||| | |||||||||||| || ||| | ||||||||||| |||||||    
T  34756794 cctgggaacctaaatccttggcaaaatccacaggaaacgtgattcctacggaatttacaccaaaatctgcaggtaaatccgcaggaaaa 34756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 622 - 673
Target Start/End: Original strand, 18425813 - 18425864
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||||| ||||||||||||||| |||| |||||||| ||||||||||    
T  18425813 tagtggcggagtcaggaattttatagaacttgggcaaaaaaattatcgcaaa 18425864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 39262360 - 39262258
Alignment:
Q  335 aagatcacacatatatgcctctataaaatcaaaatccattagcataaacaatttgaggcagaaaatgtagaagacaccaagaagagcatataatgagata 434  Q
    ||||| |||||||||| |||||||  |||||||| | |  |||| | ||||||||| | ||||||  || |||||| |||||||||||||||| ||||||    
T  39262360 aagataacacatatatacctctatgtaatcaaaagcaagaagcacagacaatttgatgaagaaaacatacaagacaacaagaagagcatataacgagata 39262261  T
Q  435 aaa 437  Q
    |||    
T  39262260 aaa 39262258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 673
Target Start/End: Original strand, 42755570 - 42755621
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||||| |||||||| |||||||| || || ||||||||||||||||    
T  42755570 tagtggcggagccaggaattatatagagcctgggcgaaaaatttatcgcaaa 42755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 2475926 - 2475857
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttca-----tgcggaatttacacaaatatccg 831  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||     ||||||||||||||||| |||||    
T  2475926 ggaacctatatcattggcaaaatctgcaagaaatgagtttcatgttgtgcggaatttacacaaaaatccg 2475857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 763 - 800
Target Start/End: Original strand, 13654786 - 13654823
Alignment:
Q  763 cctgggaacctaaatccttggcaaaatctgcatgaaat 800  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13654786 cctgggaacctaaatccttggcaaaatccgcaggaaat 13654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 7e-70; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 623 - 825
Target Start/End: Complemental strand, 52373981 - 52373779
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  52373981 agtggcggagccaggaattttatagagtctgtgcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatttc 52373882  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||| ||||||||||||||||| || |||||||||| ||||||||||||||||| || ||||||||||| |||||  ||||  ||||||||||||||    
T  52373881 acatttcatgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccctgacaaaatctgcaagaaatacgttttctgcggaatttacac 52373782  T
Q  823 aaa 825  Q
    |||    
T  52373781 aaa 52373779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 623 - 870
Target Start/End: Complemental strand, 25237815 - 25237572
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  ||||||| |||||||| || |||||   |||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    |    
T  25237815 agtggcggagctaggaattatatagagcatgggcaaattttttatcacaaaacgttacttccttcctgcgaataatttcacatttcctgcggata----c 25237720  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    |  ||||||||| |||||||||||  || |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  25237719 atctttcctgcgaatcctaaaatcataaggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacac 25237620  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatg 870  Q
    |||  |||| ||||||||||| || |||  ||||||||||||| ||||    
T  25237619 aaaattccgcaggtaaatccgcagaaaacgctaaaagttctagtaatg 25237572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 623 - 888
Target Start/End: Complemental strand, 4728785 - 4728537
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4728785 agtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcaaataatttcacattttctgcagataatttc 4728686  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| | |||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||     
T  4728685 acatttcctacagat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttact 4728603  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    |||| ||||| ||||||||||| ||||||| |||||| |||||| ||| ||| ||||||||||||||    
T  4728602 caaaaatccgcaggtaaatccgcaggaaaagctaaaaattctagtaat-ggtttggcttgctacaaa 4728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 657 - 825
Target Start/End: Complemental strand, 49745249 - 49745080
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttc-ctgcagataatttcacatttcctgcggatcctaaaatcccaatgtat 755  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||| || ||||    
T  49745249 aaaaaatttatcgtaaaatgttacgtccttcctgcgaataattttacatttttctgcggataatttcacatttcctgcggatcctaaaatcctaaggtat 49745150  T
Q  756 tacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||||| ||| ||||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||    
T  49745149 tacctcacctaggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctacggaatttacacaaa 49745080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 628 - 871
Target Start/End: Original strand, 2521792 - 2522051
Alignment:
Q  628 cggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcaca-- 725  Q
    ||||| ||||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||      
T  2521792 cggagccaggaattttatagaacatgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatatcacatt 2521891  T
Q  726 ---------------tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatg 810  Q
                   |||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||  ||||||| || |||||||||||| ||    
T  2521892 ttctgcggatatgtctttcctgcggatcctaaaatcctaagatattacctcacctgggaacctaaatccttgataaaatctacaggaaatgtgtttcctg 2521991  T
Q  811 cggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    |||| |||||||||| ||||| ||||||||||  ||||||| |||||||||| || |||||    
T  2521992 cggactttacacaaaaatccgcaggtaaatcc-caggaaaagctaaaagttcaagtaatgg 2522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 622 - 737
Target Start/End: Complemental strand, 10715884 - 10715769
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    ||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10715884 tagtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 10715785  T
Q  722 cacatttcctgcggat 737  Q
    |||||||||| |||||    
T  10715784 cacatttcctacggat 10715769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 622 - 737
Target Start/End: Complemental strand, 10929654 - 10929539
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    ||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10929654 tagtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 10929555  T
Q  722 cacatttcctgcggat 737  Q
    |||||||||| |||||    
T  10929554 cacatttcctacggat 10929539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 623 - 888
Target Start/End: Complemental strand, 46645830 - 46645582
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  46645830 agtggcggagccaggaattttatagagtctgggaaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtatataatttc 46645731  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    | |||| || |||||                  || || ||||| ||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||    
T  46645730 atattttctacggat-----------------atatctttcctgcggaacctaaactcttggcaaaatctgcatgaaatgtgtttcctgcagaatttaca 46645648  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    |||| ||||| ||||||||||| || |||| |||||| |||||| ||| |||  |||||||||||||    
T  46645647 caaaaatccgcaggtaaatccgcagaaaaagctaaaaattctagtaat-ggttgggcttgctacaaa 46645582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 737
Target Start/End: Original strand, 2017326 - 2017440
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||    
T  2017326 agtggcggagccaggaattttataaagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctacagataaattc 2017425  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  2017426 acatttcctacggat 2017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 4552412 - 4552298
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||    
T  4552412 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacaaataatttcacatttcctgcagataaattc 4552313  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  4552312 acatttcctacggat 4552298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 40969451 - 40969337
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||| ||||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||    
T  40969451 agtgacggagccagcaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcatattttctgcagataatttc 40969352  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  40969351 acatttcctacggat 40969337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 706 - 831
Target Start/End: Original strand, 41972393 - 41972518
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtt 805  Q
    |||||||  |||||||||||||| |||||||||||||||||  ||  ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  41972393 ttcctgcgaataatttcacattttctgcggatcctaaaatcttaagatattacctcacctgggaaccttaatccttggcaaaatctgcaggaaatgtgtt 41972492  T
Q  806 tcatgcggaatttacacaaatatccg 831  Q
    || ||||||||||||||||| |||||    
T  41972493 tcctgcggaatttacacaaaaatccg 41972518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 657 - 831
Target Start/End: Complemental strand, 50100063 - 50099875
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcc--------------tgcggatcctaa 742  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||              ||||||||||||    
T  50100063 aaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcggataatttcacatttcctgcaaatatatatatgcggatcctaa 50099964  T
Q  743 aatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||| || ||||||| || ||||||||||||||||||| ||||||| ||||  |||||  |||| | ||||||||||||||| |||||    
T  50099963 aatcctaaggtattacttcacctgggaacctaaatccttagcaaaatttgcagaaaatgaatttcctacggaatttacacaaaaatccg 50099875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 620 - 710
Target Start/End: Complemental strand, 10058746 - 10058656
Alignment:
Q  620 tctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10058746 tctagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 10058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 32006110 - 32005996
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| || |||||||||||||  || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||    
T  32006110 agtggcggagtcatgaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcaaataaattc 32006011  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  32006010 acatttcctacggat 32005996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 625 - 731
Target Start/End: Original strand, 43003075 - 43003181
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||| ||||||||||||  ||  |||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43003075 tggcggagccagaaattttatagagtctggacaaaaaatttattgcagaacgttacttctttcctgcgaataatttcacatttcctgcagataatttcac 43003174  T
Q  725 atttcct 731  Q
    |||||||    
T  43003175 atttcct 43003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 623 - 736
Target Start/End: Complemental strand, 9003782 - 9003669
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| ||  ||||||| |||||||||||  ||||||||||| ||||||||||||||||||||||   |||||||||    
T  9003782 agtggcggagtcagaaattttatagagcctggacaaaaaaattatcgcaaaatgttacttccttcttgcgaataatttcacatttcctatggataatttc 9003683  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  9003682 acatttcctgcgga 9003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 625 - 710
Target Start/End: Complemental strand, 31364339 - 31364254
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||| ||| ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31364339 tggcggagccagaaattttatagagcatgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 31364254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 727 - 841
Target Start/End: Complemental strand, 36947657 - 36947543
Alignment:
Q  727 ttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaat 826  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||| |||||||||||| ||| ||||| |||||| ||| ||||||| |||||     
T  36947657 ttcctgcggatcctaaaatcctaaggtattaccacacctgggaacctaaattcttggcaaaatccgcaggaaatatgtttcctgcagaatttatacaaaa 36947558  T
Q  827 atccgtaggtaaatc 841  Q
    ||||| |||||||||    
T  36947557 atccgcaggtaaatc 36947543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 2576399 - 2576285
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| || |||||||||| ||  || |||||||| |||||||||||| |||||||||| |||||| |||||||| |||| |||||||||||||     
T  2576399 agtggcggagccaagaattttataaagtctgggcaaaaaaattatcgcaaaacgttacttcctttctgcgattaatttcatattttctgcagataatttt 2576300  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  2576299 acatttcctacggat 2576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 623 - 745
Target Start/End: Complemental strand, 50384100 - 50383979
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| || |||||||||||||| || ||||||||   || ||||||| |||||||||||||||||||||||| | | ||||||| ||| |||||    
T  50384100 agtggcggagccaagaattttatagagcctgggcaaaaaaaa-attgcaaaacgttacttccttcctgcgaataattttataattcctgcggattatttc 50384002  T
Q  723 acatttcctgcggatcctaaaat 745  Q
    ||||||||| |||||||||||||    
T  50384001 acatttcctacggatcctaaaat 50383979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 31364234 - 31364170
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  31364234 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccg 31364170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 734 - 825
Target Start/End: Complemental strand, 8901934 - 8901844
Alignment:
Q  734 ggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||||||||||||| || |||||||||| | ||| || ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  8901934 ggatcctaaaatcctaaggtattacctcac-tggaaatctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggagtttacacaaa 8901844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 774 - 888
Target Start/End: Complemental strand, 14044449 - 14044336
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| || || ||||||||||| ||||||| |||||| || | | ||||| |    
T  14044449 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcgcaggtaaatccgcaggaaaagctaaaaattttcgtaatggct 14044350  T
Q  874 ctggcttgctacaaa 888  Q
     ||||||||||||||    
T  14044349 -tggcttgctacaaa 14044336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 774 - 863
Target Start/End: Complemental strand, 9003659 - 9003571
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttct 863  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||| |||||||||||||| ||||  ||||||||||    
T  9003659 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaa-atccgcaggtaaatccgaagaaaaagttaaaagttct 9003571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 767 - 888
Target Start/End: Complemental strand, 10058636 - 10058516
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    ||||||||||||||||| |||||||||  |||||||||||| |||||||||||||||||  |||  |||||||||||  |||||| |||||| |||| |     
T  10058636 ggaacctaaatccttggtaaaatctgctggaaatgtgtttcctgcggaatttacacaaaattccccaggtaaatccgcgggaaaagctaaaaattctcgt 10058537  T
Q  867 aatgggtctggcttgctacaaa 888  Q
    ||| |||  |||||||||||||    
T  10058536 aat-ggttgggcttgctacaaa 10058516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 14044551 - 14044462
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||||| ||| ||||||||||||  || |||||||| |||||||||||  |||| ||||||||| |||||||||||||||||||||    
T  14044551 agtggcggagccagaaattttatagagtatgggcaaaaaaattatcgcaaaatgttacctccttcctgagaataatttcacatttcctgc 14044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 41972335 - 41972415
Alignment:
Q  627 gcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacattt 707  Q
    |||||| ||||||||||||| |   ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41972335 gcggagccaggaattttataaaatctggtcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacattt 41972415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 11826937 - 11827024
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    ||||||| || ||| ||||||||||||| |  |||||||| |||||| ||||  ||||||||||||||||||||||||||||||||||    
T  11826937 agtggcgaagccagaaattttatagagcctaggcaaaaaaattatcgtaaaatgttacttccttcctgcgaataatttcacatttcct 11827024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 625 - 712
Target Start/End: Complemental strand, 32828368 - 32828281
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||| ||| |||||||||| || || |||||||| ||||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  32828368 tggcggagccagaaattttatagggcctgggcaaaaaaattatcacaaaatattacttccttcctgcaaataattttacatttcctgc 32828281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 655 - 737
Target Start/End: Complemental strand, 1585864 - 1585782
Alignment:
Q  655 gcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggat 737  Q
    |||||||| |||||||||||| || ||| |||| | |||||||||||||||||||||||||||| || ||||||||| |||||    
T  1585864 gcaaaaaaattatcgcaaaacgttgctttcttcgtacgaataatttcacatttcctgcagataaatttacatttcctacggat 1585782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 763 - 851
Target Start/End: Original strand, 31929044 - 31929132
Alignment:
Q  763 cctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaa 851  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||||  || ||||| |  |||||||| |||||||    
T  31929044 cctgggaacctaaatccttggcaaaatttgcaggaaatgtgtttcttgcagaatttacaataaaatccgcaaataaatccgcaggaaaa 31929132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 617 - 712
Target Start/End: Complemental strand, 9694297 - 9694204
Alignment:
Q  617 atatctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||||||||||| ||| |||||| |||||| || |||||||||| |||||||||  ||| ||||||| |||||||||||| |||||||||||    
T  9694297 atatctagtggcggagccagaaatttt-tagagcctgggcaaaaaatt-atcgcaaaatgttatttccttcttgcgaataatttgacatttcctgc 9694204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 871
Target Start/End: Complemental strand, 9694191 - 9694094
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||  |||| |  |||||||| || ||||  |||||||||||| |||||    
T  9694191 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaattccgcaaataaatccgcagaaaaagttaaaagttctagtaatgg 9694094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 10715755 - 10715690
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgca-tgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||| |||||    
T  10715755 ggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaatttacacaaaaatccg 10715690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 10929525 - 10929460
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgca-tgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||| |||||    
T  10929525 ggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaatttacacaaaaatccg 10929460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 767 - 888
Target Start/End: Complemental strand, 2576271 - 2576150
Alignment:
Q  767 ggaacctaaatccttggcaaaa-tctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    |||||||| ||||||||||||| |||||| |||||||||||| ||||||||||| ||||| || || | |||||| || || |||| |||||| |||| |    
T  2576271 ggaacctacatccttggcaaaaatctgcaggaaatgtgtttcctgcggaatttatacaaaaattcgcaagtaaattcgcagaaaaagctaaaaattcttg 2576172  T
Q  866 aaatgggtctggcttgctacaaa 888  Q
     ||| |||  |||||||||||||    
T  2576171 taat-ggttgggcttgctacaaa 2576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 823
Target Start/End: Complemental strand, 4552284 - 4552228
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacaca 823  Q
    |||||||||||||||||||||||||||| |||||   |||| |||||||||||||||    
T  4552284 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacaca 4552228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 40969323 - 40969259
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||| ||| |||||||||||  ||||||||||| ||| ||||||||||||| |||||    
T  40969323 ggaacctaaatcattgacaaaatctgcagaaaatgtgtttcctgcagaatttacacaaaaatccg 40969259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 871
Target Start/End: Original strand, 11827039 - 11827135
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| |||||||||| || ||||||| |||| |||| |||||||| ||| ||| | | ||||||||| || |||| ||||||||||||| |||||    
T  11827039 aaatcctaggcaaaatctacaggaaatgtatttc-tgcgaaatttacataaaaatctgcaagtaaatccgcagaaaaagctaaaagttctagtaatgg 11827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 635 - 692
Target Start/End: Complemental strand, 36947707 - 36947650
Alignment:
Q  635 aggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcg 692  Q
    |||||||||||| ||||||  ||||||| ||||||||||||| || ||||||||||||    
T  36947707 aggaattttataaagcttggacaaaaaaattatcgcaaaacaatatttccttcctgcg 36947650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 738
Target Start/End: Original strand, 43003156 - 43003209
Alignment:
Q  685 ttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatc 738  Q
    |||||||  ||||||||||||||||| | |||||||| ||||||||||||||||    
T  43003156 ttcctgcagataatttcacatttcctaccgataatttaacatttcctgcggatc 43003209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 767 - 831
Target Start/End: Original strand, 2017454 - 2017518
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||| |||||||||||||||  |||||   |||| ||||||||||||||||| |||||    
T  2017454 ggaacctaaatacttggcaaaatctgcgggaaatacatttcctgcggaatttacacaaaaatccg 2017518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 673
Target Start/End: Original strand, 6211530 - 6211581
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||||| ||||||||  ||||||| ||||| ||||||||||||||||    
T  6211530 tagtggcggagtcaggaattacatagagcctgagcgaaaaatttatcgcaaa 6211581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 831
Target Start/End: Complemental strand, 50383978 - 50383923
Alignment:
Q  776 atccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||| |||||||||||| |||  ||||||| |||| |||||    
T  50383978 atccttggcaaaatctgcaggaaatgtgtttcctgcaaaatttacgcaaacatccg 50383923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 673
Target Start/End: Original strand, 12211086 - 12211136
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    |||||||||| || |||||||| |||| ||| |||||||||||||||||||    
T  12211086 agtggcggagccatgaattttacagagtttgggcaaaaaatttatcgcaaa 12211136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 617 - 671
Target Start/End: Original strand, 55464512 - 55464566
Alignment:
Q  617 atatctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgca 671  Q
    |||| ||||||||||| || |||||||||| ||| |||||||| |||||||||||    
T  55464512 atatatagtggcggagccatgaattttatatagcctgagcaaacaatttatcgca 55464566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 1e-62; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 623 - 865
Target Start/End: Original strand, 12267272 - 12267513
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||  |||||||||||| || ||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||| |    
T  12267272 agtggcggagccagacattttatagagcctgggcaaaaagtttatcgcaaaacgttacttccttcctgtgaataatttcacattttctgcggataatt-c 12267370  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||||||||||||||||||||| |  |||||||||| |||  ||| |||||| | ||||||||||| || |||||||||||| |||||||||||||     
T  12267371 acatttcctgcggatcctaaaatcctatggtattacctcacctacgaatctaaattcgtggcaaaatctacaggaaatgtgtttcttgcggaatttacat 12267470  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    ||| ||||| ||||||||||  ||||||| |||||||||||||    
T  12267471 aaaaatccgcaggtaaatccacaggaaaagctaaaagttctag 12267513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 623 - 865
Target Start/End: Original strand, 13942642 - 13942886
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| || | |||||| |||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||    
T  13942642 agtggcggagccagaaattttatagagcctgggtaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtggataa-ttc 13942740  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaat---gtgtttcatgcggaattta 819  Q
    ||||||||||||||||||||||||| || |||||||||| ||||  || ||||||||||||||||||||||| |||||   ||||||  || ||||| ||    
T  13942741 acatttcctgcggatcctaaaatcctaaggtattacctcacctgataatctaaatccttggcaaaatctgcaggaaatgtggtgtttattgtggaatcta 13942840  T
Q  820 cacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    |||||| ||| | ||||||||| | ||||||| || ||||||||||    
T  13942841 cacaaaaatctgcaggtaaatcggtaggaaaagctcaaagttctag 13942886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 657 - 863
Target Start/End: Complemental strand, 767490 - 767288
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtatt 756  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||| || |||||    
T  767490 aaaaaatttattgcaaaacgttactttcttcctgcgaataatttctcattttctgcggataatttcacatttcctgcagatcctaaaatcctaaggtatt 767391  T
Q  757 acctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaa 856  Q
    ||||| |||||||| ||||||||||||||||| ||| | |||||||||||| ||||||||||| ||||| ||||    ||||||||| ||||||| ||||    
T  767390 acctcacctgggaatctaaatccttggcaaaacctgtaggaaatgtgtttcctgcggaatttatacaaaaatcc----gtaaatccgcaggaaaagctaa 767295  T
Q  857 aagttct 863  Q
    |||||||    
T  767294 aagttct 767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 623 - 871
Target Start/End: Complemental strand, 21069247 - 21069003
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||| |||| ||| ||||||||||||  || ||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||| | ||    
T  21069247 agtggtggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttatttccttcctggaaataatttcacatttcctgcagata-tatc 21069149  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       ||||||| |||||||||||||| |  |||| ||||| ||| |||||||||||| ||||||||||||||| |||||||||||| |||||||| |||||    
T  21069148 ---tttcctgtggatcctaaaatcctatggtataacctcacctaggaacctaaatctttggcaaaatctgcaggaaatgtgtttcttgcggaatatacac 21069052  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||| || || ||||||||||| ||||||  |||||| |||||| |||||    
T  21069051 aaaaatgcgcaggtaaatccgcaggaaaggctaaaaattctagtaatgg 21069003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 635 - 831
Target Start/End: Original strand, 36234456 - 36234652
Alignment:
Q  635 aggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcg 734  Q
    ||||||||||||||| |||  |||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36234456 aggaattttatagagtttggacaaaaaatttatcgcaaaatgttacttccttcttgcgaataatttcacatttcttgcagataatttcacatttcctgcg 36234555  T
Q  735 gatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||   |  |||| ||||| ||| ||||| |||| |||||| |||||||||| |||||| ||||| ||| ||||||||| ||| |||||    
T  36234556 gatcctaaaatgttatggtatcacctcacctaggaacttaaacccttggtaaaatctgcaggaaatgcgtttcctgctgaatttacataaaaatccg 36234652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 15504175 - 15503950
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| |||| |||||||| |   |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  15504175 agtggcggagccagaaattatatagagcctcgacaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcagataatttc 15504076  T
Q  723 acatttcctgc-----------------ggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtt 805  Q
    |||||||||||                 |||||||||||||| |  ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  15504075 acatttcctgcggatatatctttcccgcggatcctaaaatcctatggtattacctcatctgggaacctaaatccttggcaaaatctgcaggaaatgtgtt 15503976  T
Q  806 tcatgcggaatttacacaaatatccg 831  Q
    || ||| ||||||||||||| |||||    
T  15503975 tcctgcagaatttacacaaaaatccg 15503950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 623 - 871
Target Start/End: Complemental strand, 15675539 - 15675307
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||||||||  |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15675539 agtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtagataatttc 15675440  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  15675439 acatttccttcggat-----------------atatctttcctgcggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 15675357  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||  |||| ||||||||||| || ||||  ||||| |||||| |||||    
T  15675356 caaaactccgcaggtaaatccgcagaaaaagttaaaaattctagtaatgg 15675307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 726 - 871
Target Start/End: Original strand, 16667458 - 16667603
Alignment:
Q  726 tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||| ||||||||||||||||| |  |||||||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  16667458 tttcttgcggatcctaaaatcctatggtattacctcacatgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 16667557  T
Q  826 tatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
     ||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  16667558 aatccgcaggtaaatccgcaggaaaagctaaaagttctagtaatgg 16667603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 623 - 858
Target Start/End: Complemental strand, 35469129 - 35468910
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||| ||| ||||||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  35469129 agtggctgagccaggaattttatagagcctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcagataatttc 35469030  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    |||||| || |||||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  35469029 acattttctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 35468947  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaa 858  Q
    |||| ||||| ||  ||||||| || |||| ||||||    
T  35468946 caaaaatccgcagaaaaatccgcagaaaaagctaaaa 35468910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 623 - 737
Target Start/End: Original strand, 14832700 - 14832814
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14832700 agtggcggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 14832799  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  14832800 acatttcctacggat 14832814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 623 - 736
Target Start/End: Complemental strand, 16568017 - 16567904
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||    
T  16568017 agtggcggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttccttcctgggaataatttcacatttcctgcggataatttc 16567918  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  16567917 acatttcctgcgga 16567904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 2476591 - 2476477
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| |||| |||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||    
T  2476591 agtggcggagccagaaattatatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattc 2476492  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  2476491 acatttcctacggat 2476477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 726 - 871
Target Start/End: Original strand, 17192634 - 17192779
Alignment:
Q  726 tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||| |||||||    
T  17192634 tttcctgcggatcctaaaatccaatggtattacctcatctgggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaattgacacaaa 17192733  T
Q  826 tatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
     |||||  |||||||||| ||||| | ||||||||||||| |||||    
T  17192734 aatccgccggtaaatccgcaggaagagctaaaagttctagtaatgg 17192779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 623 - 731
Target Start/End: Original strand, 1672376 - 1672484
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  1672376 agtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttc 1672475  T
Q  723 acatttcct 731  Q
    |||||||||    
T  1672476 acatttcct 1672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 622 - 831
Target Start/End: Complemental strand, 30249192 - 30248999
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    |||||| |||| ||||||||||| ||||  || ||||||||||||||||||||| || ||| |||||||| ||||||||||||||| |||||||||||||    
T  30249192 tagtggtggagccaggaattttacagagtctgggcaaaaaatttatcgcaaaacgttgctttcttcctgcaaataatttcacattttctgcagataattt 30249093  T
Q  722 cacatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttac 820  Q
    |||||||||| |||||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  30249092 cacatttcctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 30249010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 638 - 736
Target Start/End: Original strand, 32953572 - 32953670
Alignment:
Q  638 aattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcgga 736  Q
    ||||||||||||| || |||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32953572 aattttatagagcctgtgcaaaaaagttatcgcaaaatgttacttccttcctacgaataatttcacatttcctgcagataatttcacatttcctgcgga 32953670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 737
Target Start/End: Complemental strand, 6900992 - 6900879
Alignment:
Q  624 gtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttca 723  Q
    ||||||||||||| ||||| ||||||  |||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  6900992 gtggcggagacagaaatttaatagagtatgagtaaaaaatttatcgcaaaatgttacttccttcatgcgaataatttcacatttcctgcggataatttca 6900893  T
Q  724 catttcctgcggat 737  Q
    |||||| |||||||    
T  6900892 catttcttgcggat 6900879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 623 - 736
Target Start/End: Original strand, 7161973 - 7162086
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||  |||||||||    
T  7161973 agtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcaaataatttcacatttcctgtggataatttc 7162072  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  7162073 acatttcctgcgga 7162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 33007112 - 33007025
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33007112 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 33007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 34444193 - 34444078
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaat-ttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    ||||||||||  |||||||||| ||||| || ||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||    
T  34444193 agtggcggagctaggaattttagagagcctgggcaaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaatt 34444094  T
Q  722 cacatttcctgcggat 737  Q
    |||||||||| |||||    
T  34444093 cacatttcctacggat 34444078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 34846572 - 34846485
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34846572 agtggcggagccaggaattttatagagcctggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 34846485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 623 - 736
Target Start/End: Original strand, 43228532 - 43228645
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| || |||||||| | |||||||||  ||||| | |||||||||||||||||| ||||| |||||||||||||    
T  43228532 agtggcggagccagaaattttatagagcctgggcaaaaaactaatcgcaaaatgttactcctttcctgcgaataatttcatatttcttgcagataatttc 43228631  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  43228632 acatttcctgcgga 43228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 767 - 858
Target Start/End: Complemental strand, 33007005 - 33006914
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaa 858  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||| ||||||||||| ||||||| ||||||    
T  33007005 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaaa 33006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 774 - 888
Target Start/End: Original strand, 43228655 - 43228768
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||||| ||||||||||||| ||||| |    
T  43228655 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaacatccgcaggtaaatccgtaggaaaagctaaaagttctagtaatggct 43228754  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  43228755 -gggcttgctacaaa 43228768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 767 - 888
Target Start/End: Complemental strand, 34846465 - 34846345
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||| ||||| ||||||||||| |||| || |||||| ||||||     
T  34846465 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttactgcggaatttacacaaaaatccggaggtaaatccgcaggataagctaaaaattctagt 34846366  T
Q  867 aatgggtctggcttgctacaaa 888  Q
    ||| ||| || |||||||||||    
T  34846365 aat-ggtttgacttgctacaaa 34846345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 774 - 871
Target Start/End: Complemental strand, 37779767 - 37779670
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| | ||||||||||| |||||||||||||| ||||||||||| |||||| || ||||||||||| || |||||||||||||||||| |||||    
T  37779767 aaatcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatattcgcaggtaaatccgcagaaaaaactaaaagttctagtaatgg 37779670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 37552140 - 37552051
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||| |||| ||| ||||||||||||| || |||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  37552140 agtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgc 37552051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 37654970 - 37654881
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||| |||| ||| ||||||||||||| || |||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  37654970 agtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgc 37654881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 37779869 - 37779780
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||||||| |||  |||||||||||||||| |||||||| |||||| ||||  |||||||||||| |||||||||||||||||||||||    
T  37779869 agtggcggaaacataaattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcgaataatttcacatttcctgc 37779780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 774 - 888
Target Start/End: Original strand, 32953680 - 32953793
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||||||| ||| ||  | ||||||||||| ||||||| ||||||||||||| ||||| |    
T  32953680 aaatcctaggcaaaatctgcaggaaatgtgtttcctacggaatttacataaaaatttgcaggtaaatccgtaggaaaagctaaaagttctagtaatggct 32953779  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  32953780 -gggcttgctacaaa 32953793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 774 - 863
Target Start/End: Complemental strand, 37607560 - 37607471
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttct 863  Q
    ||||||| | ||||||||||| |||||||||||||| ||||||||||| ||||||  | ||||||||||| || ||||||||||||||||    
T  37607560 aaatcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatatttgcaggtaaatccgcagaaaaaactaaaagttct 37607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 37607662 - 37607573
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||||||| |||  |||||||||||||||| |||||||| |||||| ||||  |||||||||||| || ||||||||||||||||||||    
T  37607662 agtggcggaaacataaattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcaaataatttcacatttcctgc 37607573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 623 - 799
Target Start/End: Original strand, 8214528 - 8214701
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttc-ctgcagataattt 721  Q
    |||||||||  |||||||| || ||||| |  | |||||| |||||| ||||  |||| | ||||||||||||||||||| ||||  |||| |||| | |    
T  8214528 agtggcggaaccaggaattataaagagccttggtaaaaaaattatcgtaaaatgttacgtacttcctgcgaataatttcatatttgtctgcggata-tat 8214626  T
Q  722 cacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaa 799  Q
    |   |||||||||||||||||||||| || |||||||||| |||  ||||||||||||||| ||||||||||| ||||    
T  8214627 c---tttcctgcggatcctaaaatcctaaagtattacctcacctaagaacctaaatccttgacaaaatctgcaggaaa 8214701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 774 - 888
Target Start/End: Original strand, 7162096 - 7162209
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||||| ||| ||||  ||||||||||| ||||||| |||||| || ||| ||||| |    
T  7162096 aaatcctaggcaaaatctgcaggaaatgtgtttcctgtggaatttacataaaaatcctcaggtaaatccgcaggaaaagctaaaatttttagtaatggct 7162195  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  7162196 -gggcttgctacaaa 7162209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 871
Target Start/End: Complemental strand, 16567894 - 16567797
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| ||||||||||| | |||||||||||| |||| |||||||| ||  || || ||||||||||| | ||||| ||||||||||||| |||||    
T  16567894 aaatcctaggcaaaatctgtaggaaatgtgtttcctgcgaaatttacataacaattcgcaggtaaatccgcaagaaaagctaaaagttctagtaatgg 16567797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 34444064 - 34444000
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| ||||||  |||| ||||||||||| ||||| |||||    
T  34444064 ggaacctaaatccttggcaaaatctgcaggaaatgcatttcttgcggaatttagacaaaaatccg 34444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 871
Target Start/End: Original strand, 1672499 - 1672596
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||||| |||||||||||||  |||| |||||| |||||||| |||| ||| || || ||||||||||| ||||||   |||||||||||| |||||    
T  1672499 aaatcctaggcaaaatctgcagaaaatatgtttcctgcggaatgtacataaaaattcgcaggtaaatccgcaggaaaggataaaagttctagtaatgg 1672596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 672
Target Start/End: Complemental strand, 25035034 - 25034985
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaa 672  Q
    |||||||||| ||||||||| ||||||| || ||||||||||||||||||    
T  25035034 agtggcggagtcaggaatttcatagagcctgggcaaaaaatttatcgcaa 25034985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 794
Target Start/End: Complemental strand, 13695125 - 13695094
Alignment:
Q  763 cctgggaacctaaatccttggcaaaatctgca 794  Q
    ||||||||||||||||||||||||||||||||    
T  13695125 cctgggaacctaaatccttggcaaaatctgca 13695094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 787 - 865
Target Start/End: Complemental strand, 37654878 - 37654800
Alignment:
Q  787 aatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    |||||||| |||||||||||| |  |||||||||| ||  || || ||||||||||| |||||||  ||||||||||||    
T  37654878 aatctgcaggaaatgtgtttcctatggaatttacataacaattcgcaggtaaatccgcaggaaaagataaaagttctag 37654800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Original strand, 6451758 - 6451795
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaa 660  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6451758 agtggcggagccaggaaatttatagagcttgagcaaaa 6451795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 7159609 - 7159662
Alignment:
Q  769 aacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||||| |||||||||||| ||| |||| ||||||| |||||||| |||||    
T  7159609 aacctaaattcttggcaaaatccgcaggaaacgtgtttcctgcggaatgtacac 7159662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 2e-55; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 694 - 864
Target Start/End: Complemental strand, 13243265 - 13243095
Alignment:
Q  694 ataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgc 793  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||| |    
T  13243265 ataatttcacatttcctgcggataatttcacatttcttgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccttggcaaaatctac 13243166  T
Q  794 atgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    | |||||||||||| |||||||||||||||||  |||| || |||||| | ||||||| ||||||||||||    
T  13243165 aggaaatgtgtttcctgcggaatttacacaaaactccgcagataaatctgcaggaaaagctaaaagttcta 13243095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 623 - 858
Target Start/End: Original strand, 36406378 - 36406597
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  36406378 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttgcagataatttc 36406477  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| ||||||| |||||||||||||||||||| |||||||||||| | |||||||||||    
T  36406478 acatttcctacggat-----------------atatctttcctgcggaacctcaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttaca 36406560  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaa 858  Q
    |||||||||| ||||||||||  ||||||| ||||||    
T  36406561 caaatatccgcaggtaaatccacaggaaaagctaaaa 36406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 685 - 831
Target Start/End: Original strand, 34282832 - 34282978
Alignment:
Q  685 ttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggc 784  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||    
T  34282832 ttcctgcaaataatttcacatttcatgcggataatttcacatttcctgcggatcctaaaatcctatggtattacctcacctcggaacttaaatccttggc 34282931  T
Q  785 aaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||| |||||||||||| ||| |||||||||| || |||||    
T  34282932 aaaatctgcaggaaatgtgtttcctgcagaatttacactaaaatccg 34282978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 625 - 724
Target Start/End: Original strand, 35384256 - 35384355
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  35384256 tggcggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacggtacttccttcctacgaataatttcacatttcctccagataatttcac 35384355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 623 - 864
Target Start/End: Original strand, 3383908 - 3384133
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||| | |||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||    
T  3383908 agtggcggagccagaaattttatagaacatgagcaaaaattttatcgcaaaacgttacttccttcctacgaataatttcacgtttcctgcagataaattc 3384007  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| ||||||||||||||||||||||||| ||||||||   |||  ||| |||||||||    
T  3384008 acatttcctacggata-----------------tatctttcctgcggaacctaaatccttggcaaaatctacatgaaatacattttttgcagaatttaca 3384090  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    |||| ||||| ||||||||||| || |||| |||||| |||||    
T  3384091 caaaaatccgcaggtaaatccgcagaaaaagctaaaaattcta 3384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 625 - 733
Target Start/End: Original strand, 27321753 - 27321861
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||| ||| ||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27321753 tggcagagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcac 27321852  T
Q  725 atttcctgc 733  Q
    || ||||||    
T  27321853 atatcctgc 27321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 623 - 731
Target Start/End: Complemental strand, 28928286 - 28928178
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||| ||||  || | ||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  28928286 agtggcggagccaggaattttaaagagtctgggtaaaaaatttatcgtaaaaagttacttccttcctgcgaataatttcacattttctgcagataatttc 28928187  T
Q  723 acatttcct 731  Q
    |||||||||    
T  28928186 acatttcct 28928178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 726 - 862
Target Start/End: Original strand, 39431638 - 39431774
Alignment:
Q  726 tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaa 825  Q
    |||| ||||| ||| ||||||| |  |||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||    
T  39431638 tttcttgcgggtccgaaaatcctatggtattacctcacctaggaacctaaatctttggcaaaatctgcacgaaatgtgtttcctacggaatttacacaaa 39431737  T
Q  826 tatccgtaggtaaatccgaaggaaaaactaaaagttc 862  Q
      |||| ||||||||||| | ||||| ||||||||||    
T  39431738 actccgcaggtaaatccgcaagaaaagctaaaagttc 39431774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 623 - 713
Target Start/End: Complemental strand, 24965238 - 24965148
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgca 713  Q
    |||||| ||| ||||||||||||||||| || ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  24965238 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaaccttactttctttctgcgaataatttcacatttcctgca 24965148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 38214952 - 38214863
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  38214952 agtggcggagccagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttcattcctgcgaataatttcacatttcctgc 38214863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 34282764 - 34282839
Alignment:
Q  638 aattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgca 713  Q
    ||||||||||||| ||  |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  34282764 aattttatagagcctggacaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacatttcctgca 34282839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 24965131 - 24965067
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  24965131 ggaacctaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccg 24965067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 767 - 825
Target Start/End: Complemental strand, 28928158 - 28928099
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgca-tgaaatgtgtttcatgcggaatttacacaaa 825  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  28928158 ggaacctaaatccttggcaaaatctgcagggaaatgtgtttcctgcggaatttacacaaa 28928099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 657 - 826
Target Start/End: Original strand, 31500736 - 31500907
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtatt 756  Q
    ||||||||||| |||||| |||||||||||| | |||||||||| ||||||||| |  || || ||   |||||  ||||||||||||||| || |||||    
T  31500736 aaaaaatttattgcaaaatattacttccttcatacgaataattttacatttcctacgtat-atatc---tttccaacggatcctaaaatcctaaggtatt 31500831  T
Q  757 acctctcctggg------aacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaat 826  Q
    ||||| ||| ||      ||| |||||||||||||||||| | | |||||||||||| ||| ||||||||| ||||    
T  31500832 acctcaccttggaatctaaacataaatccttggcaaaatccgtaggaaatgtgtttcctgcagaatttacataaat 31500907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 763 - 822
Target Start/End: Original strand, 21138071 - 21138130
Alignment:
Q  763 cctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    |||||||||||||||||||||||||||  ||| |||| |||||||||||| |||||||||    
T  21138071 cctgggaacctaaatccttggcaaaattcgcaggaaacgtgtttcatgcgaaatttacac 21138130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 12478287 - 12478246
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaatcc 747  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  12478287 ttcctgcagataattgcacatttcctgcggatcctaaaatcc 12478246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 635 - 682
Target Start/End: Complemental strand, 13243345 - 13243298
Alignment:
Q  635 aggaattttatagagcttgagcaaaaaatttatcgcaaaacattactt 682  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  13243345 aggaattttatagagcctgagcaaaaaatttatcgtaaaacgttactt 13243298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 673
Target Start/End: Complemental strand, 21958829 - 21958779
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||||||||||    
T  21958829 agtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaa 21958779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 737
Target Start/End: Original strand, 39431591 - 39431632
Alignment:
Q  696 aatttcacatttcctgcagataatttcacatttcctgcggat 737  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  39431591 aatttcacatttcctgtagataatttcacatttcatgcggat 39431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 673
Target Start/End: Original strand, 5637568 - 5637618
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    |||||||||| ||||||||  |||||||||| || ||||||||||||||||    
T  5637568 agtggcggagccaggaattacatagagcttgggcgaaaaatttatcgcaaa 5637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Original strand, 24592197 - 24592234
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaa 660  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  24592197 agtggcggagccaggaattttatagagcctgagcaaaa 24592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 831
Target Start/End: Original strand, 27321882 - 27321931
Alignment:
Q  782 ggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||| |||||    
T  27321882 ggcaaaatttgcaggaaatgtgtttcctgcggaatttacataaaaatccg 27321931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 38214850 - 38214793
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||| | ||||||||||| ||||||||||| |||| ||||||||| ||| |||||    
T  38214850 aaatcctagacaaaatctgcaggaaatgtgttttatgcagaatttacataaaaatccg 38214793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 4e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 634 - 871
Target Start/End: Original strand, 2836067 - 2836321
Alignment:
Q  634 caggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttc---- 729  Q
    ||||||||||||||||  ||||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  2836067 caggaattttatagagtctgagcaaaaaatttattacaagacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgt 2836166  T
Q  730 -------------ctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaat 816  Q
                 |||||||||||||||||| |  |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||    
T  2836167 cgatatacttttcctgcggatcctaaaatcctatggtattacctcacctgggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaat 2836266  T
Q  817 ttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    |||||| || ||||| || | |||||| || |||| ||||||||||||| |||||    
T  2836267 ttacacgaaaatccgcagatcaatccgcagaaaaagctaaaagttctaggaatgg 2836321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 629 - 864
Target Start/End: Complemental strand, 9696276 - 9696057
Alignment:
Q  629 ggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacattt 728  Q
    |||| ||| ||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9696276 ggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacattt 9696177  T
Q  729 cctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaata 827  Q
    ||| |||||                  || || ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |    
T  9696176 cctacggat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatatgtttcctgcggaatttacacaaaaa 9696094  T
Q  828 tccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    || | ||||||||||| ||||||| |||||| |||||    
T  9696093 tctgcaggtaaatccgcaggaaaatctaaaaattcta 9696057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 625 - 792
Target Start/End: Complemental strand, 34189023 - 34188856
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| |||||||||| |||||| |||||||||||||| ||||||||| |||| ||  || |||||||||||||||||||||||| |||||||||||    
T  34189023 tggcggagccaggaattttctagagcctgagcaaaaaatttgtcgcaaaacgttacctctctcttgcgaataatttcacatttcctgcggataatttcac 34188924  T
Q  725 atttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctg 792  Q
    ||||||||||||||||||||||| || ||||||| || |||| ||| ||||||| |||| ||||||||    
T  34188923 atttcctgcggatcctaaaatcctaaggtattacttcacctgagaatctaaatcattggtaaaatctg 34188856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 623 - 851
Target Start/End: Complemental strand, 2941449 - 2941237
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  2941449 agtggtggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataatttc 2941350  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || || || |||||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  2941349 acatttcctacggat-----------------atatctttcatgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcgaaatttaca 2941267  T
Q  822 caaatatccgtaggtaaatccgaaggaaaa 851  Q
    | || ||||| ||||||||||| |||||||    
T  2941266 ctaaaatccgcaggtaaatccgcaggaaaa 2941237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 624 - 864
Target Start/End: Complemental strand, 15529172 - 15528948
Alignment:
Q  624 gtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttca 723  Q
    ||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  15529172 gtggcggagtcaggaattttatagagcctaggcaaaaaatttatcgcaaaacattacttctttcctacgaataatttcacatttcctgcagataaattca 15529073  T
Q  724 catttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    |||||||| | |||                  || || ||||| |||||||||||||||||||||||||||| |||||   |||| ||||||||||||||    
T  15529072 catttcctacagat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacac 15528990  T
Q  823 aaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    ||| ||||| ||||||||||| ||||||| |||||| |||||    
T  15528989 aaacatccgcaggtaaatccgcaggaaaagctaaaaattcta 15528948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 623 - 864
Target Start/End: Complemental strand, 15122270 - 15122045
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||||||     
T  15122270 agtggcggagtcaggaattttatagagtttgggcaaaaaatttatcgcaaaacgttactttctttctgcgaataatttcacattttctgcagataatttt 15122171  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| |||||                  || || ||||| ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| |    
T  15122170 acatttcctacggat-----------------atatctttcctgcggaacgtaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttaga 15122088  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    || | ||||| ||||||||||| || |||| |||||| |||||    
T  15122087 cacaaatccgcaggtaaatccgcagaaaaagctaaaaattcta 15122045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 623 - 743
Target Start/End: Original strand, 10397698 - 10397818
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||  ||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  10397698 agtggcggaaccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttccaacagataatttc 10397797  T
Q  723 acatttcctgcggatcctaaa 743  Q
    ||||||||| |||| ||||||    
T  10397798 acatttcctacggaacctaaa 10397818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 622 - 831
Target Start/End: Original strand, 23663647 - 23663840
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    |||||||| || ||||||||||||||||| ||   ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  23663647 tagtggcgcagccaggaattttatagagcctggataaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacatttcctgcagataattt 23663746  T
Q  722 cacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||| || |||||    | |||    | | ||||        ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  23663747 cacattttctacggat----atatc----tttcttac--------ggaacataaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 23663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 626 - 871
Target Start/End: Original strand, 9046807 - 9047036
Alignment:
Q  626 ggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcaca 725  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  9046807 ggcggagccagaaattttatagagtttgggcaaaaaatttatcggaaaacgttatttccttcctttgaataatttcacatttcctgcagataatttcaca 9046906  T
Q  726 tttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaa 824  Q
    |||||| | |||            || ||||     || || |||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||    
T  9046907 tttcctacagat------------atatatt-----tcttgcggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatctacacaa 9046989  T
Q  825 atatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    | |||   ||||||||||| ||||||| |||||| |||||| |||||    
T  9046990 aaatctacaggtaaatccgcaggaaaagctaaaaattctagtaatgg 9047036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 616 - 831
Target Start/End: Original strand, 34248895 - 34249094
Alignment:
Q  616 catatctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcaga 715  Q
    |||||| ||||| |||| || |||||||||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  34248895 catatccagtggtggagtcaagaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcggataatttcacatttcctgcaga 34248994  T
Q  716 taatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaa 815  Q
    |||||||| |||| || |||||            || | || ||| |    |||||||||| ||||||||||||||||| |||||||||||| ||| |||    
T  34248995 taatttcatattttctacggat------------atatctttcctgt----ggaacctaaacccttggcaaaatctgcaggaaatgtgtttcctgcagaa 34249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 623 - 731
Target Start/End: Original strand, 14938811 - 14938919
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||| ||||| ||| |||||||||||||||| |||||||| |||||||||||  |||||| ||||||| |||||||||||||||||||||||||||||||    
T  14938811 agtgacggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttactttcttcctgggaataatttcacatttcctgcagataatttc 14938910  T
Q  723 acatttcct 731  Q
    |||||||||    
T  14938911 acatttcct 14938919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 623 - 736
Target Start/End: Original strand, 28614293 - 28614406
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    ||||| |||| ||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||| |||||||||    
T  28614293 agtggtggaggcagaaattttatagagcctgtgcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgctgataatttc 28614392  T
Q  723 acatttcctgcgga 736  Q
    ||||||||| ||||    
T  28614393 acatttcctacgga 28614406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 622 - 728
Target Start/End: Complemental strand, 2960900 - 2960794
Alignment:
Q  622 tagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||| |||| ||||||  ||||||||||| |||||||||||||||||||||||| ||||||||    
T  2960900 tagtggcggagccagaaattttatagagcctgagcgaaaaaattattgcaaaatgttacttccttcttgcgaataatttcacatttcctgcggataattt 2960801  T
Q  722 cacattt 728  Q
    |||||||    
T  2960800 cacattt 2960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 623 - 733
Target Start/End: Original strand, 31200045 - 31200156
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgc-aaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    |||| ||||| || |||||||||||||| || |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| |  | ||||||||    
T  31200045 agtgacggagccatgaattttatagagcatgggcaaaaaaattatcgctaaaacgttacttccttcctgcgaataatttcacattttccacggataattt 31200144  T
Q  722 cacatttcctgc 733  Q
    ||||||||||||    
T  31200145 cacatttcctgc 31200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 624 - 710
Target Start/End: Original strand, 1780933 - 1781019
Alignment:
Q  624 gtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    ||||| ||| ||||||||||||||||  || ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1780933 gtggcagagccaggaattttatagagtctgggcataaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 1781019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 623 - 737
Target Start/End: Original strand, 31188201 - 31188315
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||| ||||| || |||||||||||||| || |||||||| |||||||||||| |||||||||||||| |||||||||||||||| || | |||||||||    
T  31188201 agtgacggagccatgaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgtgaataatttcacattttctacggataatttc 31188300  T
Q  723 acatttcctgcggat 737  Q
    | |||| ||| ||||    
T  31188301 aaattttctgaggat 31188315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 623 - 712
Target Start/End: Complemental strand, 339565 - 339476
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 712  Q
    ||||||||||  || |||||||||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||    
T  339565 agtggcggagctagaaattttatagagcttgggcaaaaaatttatcgcaaaatgttacttccttcctgcaattaatttcacatttcctgc 339476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 753 - 830
Target Start/End: Complemental strand, 339448 - 339371
Alignment:
Q  753 tattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatcc 830  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||| | ||||||||||||||| ||||    
T  339448 tattacctcacctgggaacctaaatccttggtaaaatctgcaggaaatgtatttcctacggaatttacacaaaaatcc 339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 767 - 830
Target Start/End: Original strand, 1781039 - 1781102
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatcc 830  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||    
T  1781039 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgaggaatttacacaaaaatcc 1781102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 767 - 824
Target Start/End: Original strand, 10397809 - 10397866
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaa 824  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  10397809 ggaacctaaatccttggcaaaatatgcaggaaatgtgtttcctgcggaatttacacaa 10397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 821
Target Start/End: Original strand, 14938934 - 14938981
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    |||||||  |||||||||||| |||||||||||| |||||||||||||    
T  14938934 aaatcctaagcaaaatctgcaggaaatgtgtttcctgcggaatttaca 14938981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 813 - 888
Target Start/End: Original strand, 28614434 - 28614508
Alignment:
Q  813 gaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggtctggcttgctacaaa 888  Q
    ||||||||| ||| ||||| ||||||||||| |||||||  |||||||||||| ||||| |  |||||||||||||    
T  28614434 gaatttacataaaaatccgcaggtaaatccgtaggaaaagttaaaagttctagtaatggct-aggcttgctacaaa 28614508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 623 - 871
Target Start/End: Complemental strand, 14727556 - 14727324
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14727556 agtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttc 14727457  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctg-ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||| | |||                  || || ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  14727456 acatttcctacagat-----------------atatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 14727374  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgg 871  Q
    ||||  |||| ||||||||||| ||||||| |||||| |||||| |||||    
T  14727373 caaaactccgcaggtaaatccgcaggaaaagctaaaaattctagtaatgg 14727324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 623 - 824
Target Start/End: Complemental strand, 34459347 - 34459150
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||| ||||| ||||||||||||||||  || |||||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||||| | ||    
T  34459347 agtgacggagccaggaattttatagagtctgggcaaaaaatttatcacaaaacgttacttccttcccacgaataatttcacatttcctacagata-tatc 34459249  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       |||| ||||||||||||||||| || |||||||||| |||| |||| |||||||||||||||||||||| |||||||||||| | ||||| || |||    
T  34459248 ---tttcttgcggatcctaaaatcctaaggtattacctcacctgagaacttaaatccttggcaaaatctgcaggaaatgtgtttcctacggaaattccac 34459152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 657 - 888
Target Start/End: Original strand, 48940328 - 48940553
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtatt 756  Q
    |||||| |||| ||||||| ||| ||| || ||||||||||||||||||||  |||||||||||||||||||||||| |||     |||  ||   ||||    
T  48940328 aaaaaaattattgcaaaactttatttctttactgcgaataatttcacattttttgcagataatttcacatttcctgcagat-----aatttcacgttatt 48940422  T
Q  757 acctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaa 856  Q
    ||||| ||||  || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |  |||||||| ||||||| ||||    
T  48940423 acctcacctgaaaagctaaatccttgacaaaatctgcatgaaatgtgtttcctgcggaatttacacaaaaatccgcaaataaatccgcaggaaaagctaa 48940522  T
Q  857 aagttctagaaatgggtctggcttgctacaaa 888  Q
    ||||||||| ||||| | ||||||||||||||    
T  48940523 aagttctagtaatggct-tggcttgctacaaa 48940553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 623 - 831
Target Start/End: Original strand, 27583906 - 27584094
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||    
T  27583906 agtggcggagccaggaattttatagagcctgagcaaaaaatttatcgcaaaacgtta----cttcctgcgaataatttcacatttcctgcagataatttc 27584001  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
    ||||||||| |||||            || | || |||     ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  27584002 acatttcctacggat------------atatctttcct----ggggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacac 27584085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 623 - 743
Target Start/End: Complemental strand, 27460904 - 27460785
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| || |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27460904 agtggcggagccaagaattttatagagcctggg-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 27460806  T
Q  723 acatttcctgcggatcctaaa 743  Q
    ||||||||| |||| ||||||    
T  27460805 acatttcctacggaacctaaa 27460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 618 - 737
Target Start/End: Complemental strand, 25007695 - 25007576
Alignment:
Q  618 tatctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagata 717  Q
    |||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  25007695 tatccagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagata 25007596  T
Q  718 atttcacatttcctgcggat 737  Q
    | |||||||||||| |||||    
T  25007595 aattcacatttcctacggat 25007576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 625 - 737
Target Start/End: Original strand, 37153881 - 37153993
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  37153881 tggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcac 37153980  T
Q  725 atttcctgcggat 737  Q
    ||||||| |||||    
T  37153981 atttcctacggat 37153993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 44305638 - 44305524
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||| || |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||    
T  44305638 agtggcggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattc 44305539  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  44305538 acatttcctacggat 44305524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 9527283 - 9527079
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||| ||| ||| ||||||||||||  || ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||   |||| | ||    
T  9527283 agtggcagagccagaaattttatagagtatgggcaaaaaatttatcgcaaaacgttactgtcttcctgcgaataatttcacatttcctatggata-tatc 9527185  T
Q  723 acatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacac 822  Q
       ||||  | |||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| || ||||||||| || | |||||||||    
T  9527184 ---tttctggaggatcctaaaatcctaagatattacctcacctgggaacctaaatccttggcaaaatctgcaggagatgtgtttcctgtgaaatttacac 9527088  T
Q  823 aaatatccg 831  Q
     || |||||    
T  9527087 caaaatccg 9527079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 621 - 717
Target Start/End: Original strand, 33468858 - 33468954
Alignment:
Q  621 ctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagata 717  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33468858 ctagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacagata 33468954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 625 - 831
Target Start/End: Original strand, 4641928 - 4642151
Alignment:
Q  625 tggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcac 724  Q
    |||| ||| |||||||||||||||||  | |||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||     
T  4641928 tggcagagtcaggaattttatagagcccgtgcaaaaaatcaatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatttcat 4642027  T
Q  725 a-----------------tttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttc 807  Q
    |                 |||||||||||||||||||||| || |||||||||| ||| | |||||||||||||| ||||||||||| ||||||| ||||    
T  4642028 atttcctgcggatatatctttcctgcggatcctaaaatcctaaggtattacctcacctcgaaacctaaatccttgacaaaatctgcaagaaatgtatttc 4642127  T
Q  808 atgcggaatttacacaaatatccg 831  Q
     || | |||||||| ||| |||||    
T  4642128 ctgtgaaatttacataaaaatccg 4642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 638 - 831
Target Start/End: Original strand, 6801988 - 6802181
Alignment:
Q  638 aattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggat 737  Q
    |||||||||||| |||  |||||||||||||||||||| ||| ||||| | |||| |||||| |||||||||||||||||     || ||||||| ||||    
T  6801988 aattttatagagtttggacaaaaaatttatcgcaaaacgttatttcctacatgcggataattgcacatttcctgcagatat----acctttcctgaggat 6802083  T
Q  738 cctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatc----tgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||  || |||||||||| ||||||||||||||||||||||||||||     ||| |||||||||||| || |||||||||| ||| |||||    
T  6802084 cctaaaatcgtaaggtattacctcacctgggaacctaaatccttggcaaaatccgcaggcaggaaatgtgtttcctgtggaatttacagaaaaatccg 6802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 715 - 830
Target Start/End: Complemental strand, 24646203 - 24646088
Alignment:
Q  715 ataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcgga 814  Q
    ||||||||| ||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  24646203 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacgga 24646104  T
Q  815 atttacacaaatatcc 830  Q
    || |||||||| ||||    
T  24646103 atgtacacaaaaatcc 24646088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 799
Target Start/End: Complemental strand, 49898609 - 49898442
Alignment:
Q  628 cggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatt 727  Q
    ||||| ||| |||| |||||||  || ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||  ||| || ||   ||    
T  49898609 cggagccagaaattatatagagtctgggcaaaaaatttatcgcaaaatgttacgtccttcctgcgaataatttcacatttcctgtggat-atatc---tt 49898514  T
Q  728 tcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaa 799  Q
    || ||||||||||||||||| || |||||||||| ||| || ||||||||||||||||||||||||| ||||    
T  49898513 tcttgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaatctgcaggaaa 49898442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 737
Target Start/End: Original strand, 1428312 - 1428422
Alignment:
Q  627 gcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacat 726  Q
    |||||| ||||||||||||||||| || |||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||  |||||||    
T  1428312 gcggagccaggaattttatagagcctgggcaaaaaatttaccgcaaaacgttacttccttcctacgaataatttcacattttctgcagatagattcacat 1428411  T
Q  727 ttcctgcggat 737  Q
    ||||| |||||    
T  1428412 ttcctacggat 1428422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 623 - 736
Target Start/End: Complemental strand, 4774198 - 4774085
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||| ||||||||||||  || |||||||| |||||||||||  |||||| ||||||||||||||||||||||||| ||| |||||||||    
T  4774198 agtggcggagccagaaattttatagagtctgggcaaaaaaattatcgcaaaatgttactttcttcctgcgaataatttcacatttcttgcggataatttc 4774099  T
Q  723 acatttcctgcgga 736  Q
    ||||||||||||||    
T  4774098 acatttcctgcgga 4774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 715 - 843
Target Start/End: Complemental strand, 24745562 - 24745434
Alignment:
Q  715 ataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcgga 814  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| |||   ||||||||||||||||||||||||||  ||||||||||| ||| ||    
T  24745562 ataatttcacatttcctgcggatcctaaaatcctagggtattacctcaccttaaaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcaga 24745463  T
Q  815 atttacacaaatatccgtaggtaaatccg 843  Q
    ||||||||||| | ||  |||||||||||    
T  24745462 atttacacaaaaaaccacaggtaaatccg 24745434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 767 - 871
Target Start/End: Original strand, 31844637 - 31844741
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||| |||||| ||||||     
T  31844637 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatctgcaggtaaatccgtaggaaaagctaaaatttctagt 31844736  T
Q  867 aatgg 871  Q
    |||||    
T  31844737 aatgg 31844741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 767 - 871
Target Start/End: Complemental strand, 6331784 - 6331680
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctaga 866  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||| |||||| ||||||     
T  6331784 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaaaatccggaggtaaacccgcaggaaaagctaaaatttctagt 6331685  T
Q  867 aatgg 871  Q
    |||||    
T  6331684 aatgg 6331680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 6331891 - 6331804
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  6331891 agtggcggaaccaggaattttatagagcatgagcaaaaaatttatcgcaaaacgttacttccttccttcaaataatttcacatttcct 6331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 31844530 - 31844617
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  31844530 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcct 31844617  T

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Target: chr1; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 831
Target Start/End: Original strand, 25011424 - 25011617
Alignment:
Q  621 ctagtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatt 720  Q
    |||||||||| | ||| |||||||||||   || |||||||| |||||||||||| ||||||||||| ||||||||||||  ||||| ||||||||||||    
T  25011424 ctagtggcggcgccagaaattttatagaatctgggcaaaaaaattatcgcaaaacgttacttccttcatgcgaataattttgcattttctgcagataatt 25011523  T
Q  721 tcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttac 820  Q
    ||||||||||| |||||            || | ||   ||| |  ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  25011524 tcacatttcctacggat------------atatctt---tctgc--ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcggaatttac 25011606  T

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Target: chr1; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 8239498 - 8239411
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||||||||||||||| | |  ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  8239498 agtggcggagccaggaattttatagaacctaggcaaaaaatttatcgcaaaacgttacttccttcctatgaataatttcacatttcct 8239411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 767 - 871
Target Start/End: Complemental strand, 8239391 - 8239285
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgt--ttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttcta 864  Q
    |||||||||||||||||||||||||||| ||||| | |  ||| ||||||||||||||||| ||||| ||||||||| | ||||||| |||||| |||||    
T  8239391 ggaacctaaatccttggcaaaatctgcaggaaatatatatttcctgcggaatttacacaaaaatccgcaggtaaatctgcaggaaaagctaaaaattcta 8239292  T
Q  865 gaaatgg 871  Q
    | |||||    
T  8239291 gtaatgg 8239285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 27460794 - 27460730
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||    
T  27460794 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttccttcggaatttacacaaaaatccg 27460730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 702
Target Start/End: Complemental strand, 24646270 - 24646195
Alignment:
Q  627 gcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttca 702  Q
    |||||| ||||||||||||||||| || |||||||| ||||| |||||  ||||||||||| ||||||||||||||    
T  24646270 gcggagccaggaattttatagagcctgggcaaaaaaattatctcaaaatgttacttccttcatgcgaataatttca 24646195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Original strand, 37154007 - 37154071
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||   |||| ||||||||||||||||| |||||    
T  37154007 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccg 37154071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 44305510 - 44305446
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||||||||||||||||||||||| |||||   |||| ||||||||||||||||| |||||    
T  44305510 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccg 44305446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 831
Target Start/End: Complemental strand, 25007561 - 25007498
Alignment:
Q  768 gaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||||||||||||||||||||||||| |||||   |||| ||||||||||||||||| |||||    
T  25007561 gaacctaaatccttggcaaaatctgcaggaaatacatttcttgcggaatttacacaaaaatccg 25007498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 767 - 821
Target Start/End: Original strand, 44238875 - 44238929
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  44238875 ggaacctaaatccttggcaaaatctacaagaaatgtgtttcctgcagaatttaca 44238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 737
Target Start/End: Original strand, 44238791 - 44238844
Alignment:
Q  684 cttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggat 737  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  44238791 cttcatgcgaatattttcacatttcctgcggataatttcacatttcatgcggat 44238844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 787 - 831
Target Start/End: Complemental strand, 4774085 - 4774041
Alignment:
Q  787 aatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||    
T  4774085 aatctgcaggaaatgtgtttcctgcggaatttacataaatatccg 4774041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 673
Target Start/End: Complemental strand, 3830151 - 3830102
Alignment:
Q  624 gtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||| |||||| ||||| ||||| | |||||||||||||||||||    
T  3830151 gtggcggagccaggaaatttatggagctcgggcaaaaaatttatcgcaaa 3830102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 83; Significance: 8e-39; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 1922 - 1808
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||||  || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||    
T  1922 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttc 1823  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  1822 acatttcctacggat 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 831
Target Start/End: Complemental strand, 1794 - 1730
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccg 831  Q
    ||||| ||||| |||||||||||||||| |||||||||||| |||| |||||||||||| |||||    
T  1794 ggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaaaaatccg 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 83; Significance: 8e-39; HSPs: 4)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 623 - 737
Target Start/End: Complemental strand, 11750 - 11636
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 722  Q
    |||||||||| ||||||||||||||| | || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||    
T  11750 agtggcggagccaggaattttatagaacctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattc 11651  T
Q  723 acatttcctgcggat 737  Q
    ||||||||| |||||    
T  11650 acatttcctacggat 11636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 635 - 737
Target Start/End: Complemental strand, 7124 - 7023
Alignment:
Q  635 aggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcg 734  Q
    |||||||||||||| | || ||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||| ||    
T  7124 aggaattttatagaacctgggcaaaaaatttatcgcaaa-cgttacttccttcctacgaataattttacatttcctgctgataaattcacatttcctacg 7026  T
Q  735 gat 737  Q
    |||    
T  7025 gat 7023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 7009 - 6952
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaa 824  Q
    |||||||||||||||||||||||||||| ||||||  |||| | ||||||||||||||    
T  7009 ggaacctaaatccttggcaaaatctgcaggaaatgcatttccttcggaatttacacaa 6952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 11622 - 11565
Alignment:
Q  767 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaa 824  Q
    |||||||||||||||||||||||||||| ||||||  |||  ||||||||||||||||    
T  11622 ggaacctaaatccttggcaaaatctgcaggaaatgcattttctgcggaatttacacaa 11565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 72; Significance: 3e-32; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 623 - 865
Target Start/End: Original strand, 112093 - 112329
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaa-atttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 721  Q
    ||||| |||| ||| ||||| || |||| || ||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| ||  |||| | |    
T  112093 agtggtggagtcagaaatttcattgagcctgggcaaaaatatttattgcaaaacattacttccttcctgcaaataatttcacgtttcatgtggata-tat 112191  T
Q  722 cacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttaca 821  Q
    |   |||||||||||||||||||||| |  ||||||||||  |||||||||||||| ||| ||| ||||||||  ||||||||    || ||||||||||    
T  112192 c---tttcctgcggatcctaaaatcctatggtattacctcatctgggaacctaaattcttagcagaatctgcagaaaatgtgt---ctgtggaatttaca 112285  T
Q  822 caaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    |||| || || ||||||||||| |||||||  ||||||||||||    
T  112286 caaaaattcgcaggtaaatccgtaggaaaagttaaaagttctag 112329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 706 - 865
Target Start/End: Original strand, 109255 - 109414
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaatcccaatgtattacctctcctgggaacctaaatccttggcaaaatctgcatgaaatgtgtt 805  Q
    |||||||  |||||||||| ||||||| |||||||||||||| |  |||||| ||| ||||||||||||||| ||| ||||||||||||  | |||||||    
T  109255 ttcctgcgaataatttcacgtttcctgtggatcctaaaatcctatggtattatctcacctgggaacctaaattcttagcaaaatctgcagaacatgtgtt 109354  T
Q  806 tcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctag 865  Q
    |  ||||||||||||||||| || || ||||||||||  |||||||  ||||||||||||    
T  109355 ttctgcggaatttacacaaaaattcgcaggtaaatccacaggaaaagttaaaagttctag 109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 703
Target Start/End: Original strand, 109227 - 109273
Alignment:
Q  657 aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcac 703  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||    
T  109227 aaaatatttattgcaaaacattacttccttcctgcgaataatttcac 109273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 623 - 710
Target Start/End: Complemental strand, 4304 - 4217
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 710  Q
    |||||||||| ||  ||||||||||||| || |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  4304 agtggcggagccataaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcct 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 774 - 888
Target Start/End: Complemental strand, 4202 - 4089
Alignment:
Q  774 aaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatttacacaaatatccgtaggtaaatccgaaggaaaaactaaaagttctagaaatgggt 873  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||||||| ||| ||||| |||||||| || ||||||| ||||||||||||| ||||| |    
T  4202 aaatcctgggcaaaatctgcaggaaatgtgtttcctacggaatttacataaacatccgcaggtaaattcgcaggaaaagctaaaagttctagtaatggct 4103  T
Q  874 ctggcttgctacaaa 888  Q
      |||||||||||||    
T  4102 -gggcttgctacaaa 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 673
Target Start/End: Original strand, 214019 - 214069
Alignment:
Q  623 agtggcggagacaggaattttatagagcttgagcaaaaaatttatcgcaaa 673  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||||||||||    
T  214019 agtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaa 214069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 747
Target Start/End: Original strand, 20937 - 20978
Alignment:
Q  706 ttcctgcagataatttcacatttcctgcggatcctaaaatcc 747  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  20937 ttcctgcggataattgcacatttcctgcggatcctaaaatcc 20978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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