View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6898_low_7 (Length: 275)

Name: NF6898_low_7
Description: NF6898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6898_low_7
NF6898_low_7
[»] chr3 (39 HSPs)
chr3 (14-268)||(54685104-54685358)
chr3 (14-268)||(33342079-33342333)
chr3 (14-268)||(38168112-38168372)
chr3 (14-250)||(53771239-53771474)
chr3 (14-240)||(30153140-30153365)
chr3 (14-250)||(16261651-16261886)
chr3 (15-212)||(28558370-28558567)
chr3 (14-214)||(23492571-23492771)
chr3 (14-170)||(7854180-7854336)
chr3 (14-170)||(17955885-17956041)
chr3 (15-161)||(45581830-45581976)
chr3 (14-170)||(55513068-55513224)
chr3 (14-170)||(3992748-3992904)
chr3 (14-170)||(54038025-54038181)
chr3 (14-170)||(2844389-2844545)
chr3 (139-268)||(13839200-13839329)
chr3 (14-126)||(18970119-18970231)
chr3 (139-268)||(12029970-12030105)
chr3 (139-268)||(2050115-2050249)
chr3 (139-240)||(17912330-17912430)
chr3 (139-268)||(19260647-19260781)
chr3 (15-94)||(48421776-48421855)
chr3 (139-250)||(11986003-11986112)
chr3 (172-268)||(5240527-5240628)
chr3 (15-94)||(15550797-15550876)
chr3 (139-250)||(13954728-13954836)
chr3 (139-250)||(45861122-45861230)
chr3 (139-214)||(2449109-2449184)
chr3 (139-214)||(15615137-15615212)
chr3 (137-268)||(51960932-51961065)
chr3 (139-213)||(14285289-14285363)
chr3 (139-214)||(14842444-14842519)
chr3 (139-213)||(19947026-19947100)
chr3 (15-124)||(11402789-11402898)
chr3 (18-116)||(17393636-17393735)
chr3 (139-214)||(8268607-8268682)
chr3 (139-214)||(8275707-8275782)
chr3 (139-214)||(18896918-18896993)
chr3 (139-212)||(12264668-12264741)
[»] scaffold0465 (1 HSPs)
scaffold0465 (14-268)||(9785-10040)
[»] scaffold0597 (1 HSPs)
scaffold0597 (14-268)||(781-1035)
[»] chr2 (30 HSPs)
chr2 (14-268)||(9652699-9652953)
chr2 (14-250)||(21273872-21274106)
chr2 (14-170)||(22274920-22275076)
chr2 (14-170)||(22284153-22284309)
chr2 (20-170)||(25213252-25213403)
chr2 (20-170)||(15633418-15633568)
chr2 (139-244)||(22863235-22863340)
chr2 (139-244)||(36982291-36982396)
chr2 (139-238)||(8891549-8891648)
chr2 (139-214)||(463043-463118)
chr2 (15-170)||(7321716-7321871)
chr2 (139-242)||(24341238-24341341)
chr2 (139-214)||(14906311-14906386)
chr2 (139-214)||(23820388-23820463)
chr2 (139-216)||(20015328-20015405)
chr2 (139-249)||(17396492-17396599)
chr2 (139-214)||(19689272-19689347)
chr2 (140-268)||(32466177-32466304)
chr2 (139-249)||(25265227-25265335)
chr2 (139-213)||(33128372-33128446)
chr2 (139-250)||(12641483-12641591)
chr2 (15-93)||(20279610-20279688)
chr2 (139-250)||(12635709-12635817)
chr2 (139-250)||(12728699-12728807)
chr2 (139-250)||(34824782-34824890)
chr2 (139-214)||(8944153-8944228)
chr2 (140-250)||(23774444-23774551)
chr2 (190-255)||(27262176-27262244)
chr2 (139-213)||(28031092-28031166)
chr2 (140-213)||(21142203-21142276)
[»] scaffold0234 (1 HSPs)
scaffold0234 (16-268)||(17207-17459)
[»] chr5 (26 HSPs)
chr5 (14-268)||(21650893-21651147)
chr5 (14-268)||(21205124-21205382)
chr5 (14-268)||(2032008-2032263)
chr5 (14-212)||(11342883-11343081)
chr5 (20-212)||(16105847-16106040)
chr5 (19-242)||(25005019-25005240)
chr5 (139-244)||(27182398-27182503)
chr5 (151-268)||(23981307-23981425)
chr5 (15-93)||(22662653-22662731)
chr5 (141-242)||(18530917-18531018)
chr5 (139-219)||(108680-108760)
chr5 (139-214)||(20623286-20623361)
chr5 (139-214)||(21233399-21233474)
chr5 (139-242)||(22053682-22053785)
chr5 (139-214)||(37053061-37053136)
chr5 (139-214)||(16536514-16536589)
chr5 (139-214)||(23507270-23507345)
chr5 (139-214)||(25900277-25900352)
chr5 (151-250)||(32951024-32951121)
chr5 (151-210)||(7529240-7529299)
chr5 (139-250)||(1219361-1219469)
chr5 (140-250)||(23328865-23328972)
chr5 (140-250)||(24616469-24616576)
chr5 (140-250)||(24712845-24712952)
chr5 (140-250)||(24745863-24745970)
chr5 (139-215)||(7425631-7425707)
[»] chr7 (38 HSPs)
chr7 (14-268)||(2029119-2029373)
chr7 (14-268)||(3049780-3050040)
chr7 (14-219)||(42056140-42056346)
chr7 (14-250)||(2190008-2190243)
chr7 (14-170)||(126613-126769)
chr7 (14-170)||(1936918-1937074)
chr7 (14-170)||(32493947-32494103)
chr7 (14-170)||(111170-111326)
chr7 (32-212)||(15516720-15516901)
chr7 (139-244)||(11580588-11580693)
chr7 (139-239)||(16212071-16212170)
chr7 (151-244)||(13036865-13036958)
chr7 (139-268)||(36052971-36053105)
chr7 (15-123)||(13352151-13352259)
chr7 (15-123)||(39291457-39291565)
chr7 (139-242)||(15709469-15709572)
chr7 (172-268)||(17817258-17817359)
chr7 (172-268)||(19049642-19049743)
chr7 (137-240)||(25124448-25124550)
chr7 (139-250)||(7293333-7293441)
chr7 (139-214)||(11516544-11516619)
chr7 (139-214)||(15441435-15441510)
chr7 (139-214)||(30262000-30262075)
chr7 (139-250)||(13321334-13321443)
chr7 (139-242)||(36024452-36024556)
chr7 (139-214)||(14113860-14113935)
chr7 (140-214)||(25292209-25292283)
chr7 (139-213)||(47480902-47480976)
chr7 (151-214)||(14423511-14423574)
chr7 (18-92)||(15977820-15977894)
chr7 (140-213)||(10000245-10000318)
chr7 (139-250)||(13758677-13758785)
chr7 (18-116)||(18151259-18151357)
chr7 (140-213)||(48622541-48622614)
chr7 (190-255)||(3895395-3895462)
chr7 (139-215)||(15927875-15927951)
chr7 (139-215)||(18979894-18979970)
chr7 (190-255)||(39046437-39046504)
[»] scaffold0032 (2 HSPs)
scaffold0032 (14-242)||(55779-56007)
scaffold0032 (68-214)||(108032-108179)
[»] chr8 (24 HSPs)
chr8 (14-240)||(24385584-24385809)
chr8 (14-268)||(41506611-41506866)
chr8 (14-170)||(24716763-24716919)
chr8 (14-170)||(39115473-39115629)
chr8 (15-170)||(274642-274797)
chr8 (15-170)||(641052-641207)
chr8 (15-170)||(826858-827013)
chr8 (15-123)||(17502360-17502468)
chr8 (139-268)||(43373290-43373424)
chr8 (15-255)||(21259304-21259547)
chr8 (139-268)||(24928614-24928748)
chr8 (15-123)||(4234054-4234162)
chr8 (15-123)||(23218076-23218184)
chr8 (139-226)||(16193588-16193674)
chr8 (14-80)||(22321437-22321503)
chr8 (140-268)||(7000422-7000551)
chr8 (139-250)||(22907052-22907160)
chr8 (139-214)||(5238404-5238479)
chr8 (139-214)||(24661119-24661194)
chr8 (139-214)||(43685863-43685938)
chr8 (151-213)||(21494314-21494376)
chr8 (139-213)||(22886654-22886728)
chr8 (139-213)||(3431134-3431208)
chr8 (15-93)||(18118259-18118337)
[»] scaffold0251 (1 HSPs)
scaffold0251 (14-250)||(13208-13443)
[»] chr4 (31 HSPs)
chr4 (14-250)||(15272134-15272369)
chr4 (14-215)||(14951960-14952161)
chr4 (14-170)||(5682429-5682584)
chr4 (14-170)||(25119108-25119264)
chr4 (69-250)||(15135830-15136010)
chr4 (139-244)||(13246737-13246842)
chr4 (139-268)||(122194-122328)
chr4 (14-146)||(19559557-19559689)
chr4 (139-242)||(15674938-15675041)
chr4 (14-123)||(49071885-49071994)
chr4 (139-242)||(10104099-10104202)
chr4 (140-268)||(55376397-55376525)
chr4 (139-250)||(26680517-26680625)
chr4 (139-214)||(16608970-16609045)
chr4 (139-242)||(33241011-33241114)
chr4 (155-255)||(40885371-40885475)
chr4 (142-242)||(31132628-31132728)
chr4 (139-214)||(16327797-16327872)
chr4 (20-94)||(34177617-34177691)
chr4 (151-213)||(32460561-32460623)
chr4 (139-214)||(10488879-10488954)
chr4 (148-214)||(13048092-13048158)
chr4 (140-213)||(22738577-22738650)
chr4 (139-250)||(20001030-20001138)
chr4 (140-250)||(26339327-26339434)
chr4 (139-213)||(7131940-7132014)
chr4 (139-213)||(8045272-8045346)
chr4 (190-243)||(23269756-23269809)
chr4 (19-79)||(14500208-14500268)
chr4 (139-215)||(15287118-15287194)
chr4 (139-215)||(15294227-15294303)
[»] scaffold0706 (1 HSPs)
scaffold0706 (13-240)||(6375-6601)
[»] chr6 (25 HSPs)
chr6 (14-250)||(23995121-23995356)
chr6 (14-240)||(26089933-26090159)
chr6 (15-213)||(15742078-15742275)
chr6 (14-213)||(18002353-18002553)
chr6 (14-170)||(19983193-19983349)
chr6 (14-170)||(35015058-35015214)
chr6 (14-170)||(4991271-4991427)
chr6 (14-170)||(18583515-18583671)
chr6 (139-268)||(23148303-23148432)
chr6 (139-268)||(27751742-27751872)
chr6 (139-244)||(23153754-23153859)
chr6 (15-123)||(22585494-22585602)
chr6 (15-123)||(22590325-22590433)
chr6 (15-146)||(15889631-15889762)
chr6 (14-123)||(15004855-15004963)
chr6 (15-123)||(25640504-25640611)
chr6 (139-250)||(29666181-29666290)
chr6 (139-214)||(1649978-1650053)
chr6 (139-268)||(35009253-35009384)
chr6 (139-213)||(32276617-32276691)
chr6 (192-243)||(14128502-14128552)
chr6 (151-213)||(16299844-16299906)
chr6 (139-213)||(18823241-18823315)
chr6 (139-213)||(18839096-18839170)
chr6 (139-215)||(16232199-16232275)
[»] scaffold0004 (1 HSPs)
scaffold0004 (14-268)||(193295-193545)
[»] scaffold0039 (1 HSPs)
scaffold0039 (15-268)||(12316-12574)
[»] chr1 (14 HSPs)
chr1 (14-212)||(15861285-15861483)
chr1 (14-170)||(21860209-21860365)
chr1 (14-170)||(44034872-44035028)
chr1 (14-94)||(22367216-22367296)
chr1 (139-244)||(37844301-37844406)
chr1 (139-244)||(20445987-20446092)
chr1 (139-244)||(20893478-20893583)
chr1 (139-244)||(20531751-20531856)
chr1 (139-268)||(20913335-20913469)
chr1 (78-170)||(41218667-41218759)
chr1 (139-268)||(20931650-20931784)
chr1 (139-214)||(45051726-45051801)
chr1 (139-214)||(51452809-51452884)
chr1 (140-250)||(7640775-7640882)
[»] scaffold0034 (1 HSPs)
scaffold0034 (14-170)||(80062-80218)
[»] scaffold0303 (2 HSPs)
scaffold0303 (14-213)||(4304-4504)
scaffold0303 (14-94)||(5-85)
[»] scaffold0686 (2 HSPs)
scaffold0686 (14-170)||(5984-6140)
scaffold0686 (25-170)||(5778-5923)
[»] scaffold0016 (2 HSPs)
scaffold0016 (16-170)||(162079-162233)
scaffold0016 (16-170)||(166165-166319)
[»] scaffold0184 (1 HSPs)
scaffold0184 (14-170)||(31181-31337)
[»] scaffold0078 (2 HSPs)
scaffold0078 (14-170)||(41507-41663)
scaffold0078 (139-250)||(36904-37012)
[»] scaffold0028 (3 HSPs)
scaffold0028 (20-170)||(130760-130911)
scaffold0028 (151-268)||(89281-89398)
scaffold0028 (151-244)||(107635-107728)
[»] scaffold0132 (2 HSPs)
scaffold0132 (30-170)||(42568-42708)
scaffold0132 (139-242)||(13824-13927)
[»] scaffold0116 (2 HSPs)
scaffold0116 (14-170)||(30292-30448)
scaffold0116 (154-214)||(353-413)
[»] scaffold0342 (1 HSPs)
scaffold0342 (14-170)||(353-508)
[»] scaffold0162 (3 HSPs)
scaffold0162 (139-268)||(26243-26372)
scaffold0162 (139-268)||(7993-8125)
scaffold0162 (139-214)||(12063-12138)
[»] scaffold0175 (3 HSPs)
scaffold0175 (180-268)||(15238-15326)
scaffold0175 (14-103)||(15147-15236)
scaffold0175 (139-214)||(839-914)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-268)||(51008-51140)
[»] scaffold0025 (2 HSPs)
scaffold0025 (139-268)||(146906-147040)
scaffold0025 (139-242)||(9160-9263)
[»] scaffold0106 (1 HSPs)
scaffold0106 (139-268)||(42034-42166)
[»] scaffold0498 (1 HSPs)
scaffold0498 (139-268)||(9183-9317)
[»] scaffold0011 (1 HSPs)
scaffold0011 (151-247)||(123011-123107)
[»] scaffold0001 (2 HSPs)
scaffold0001 (139-268)||(172210-172344)
scaffold0001 (139-268)||(177913-178047)
[»] scaffold0063 (1 HSPs)
scaffold0063 (15-146)||(44039-44170)
[»] scaffold0266 (2 HSPs)
scaffold0266 (139-268)||(1430-1564)
scaffold0266 (139-240)||(3440-3540)
[»] scaffold0302 (1 HSPs)
scaffold0302 (139-268)||(12418-12553)
[»] scaffold0012 (2 HSPs)
scaffold0012 (139-244)||(247292-247398)
scaffold0012 (139-214)||(34032-34107)
[»] scaffold0009 (1 HSPs)
scaffold0009 (139-268)||(272330-272464)
[»] scaffold0058 (1 HSPs)
scaffold0058 (136-250)||(57315-57427)
[»] scaffold0160 (1 HSPs)
scaffold0160 (140-268)||(339-468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (139-240)||(128027-128127)
[»] scaffold1295 (1 HSPs)
scaffold1295 (15-94)||(305-384)
[»] scaffold0507 (1 HSPs)
scaffold0507 (15-94)||(1478-1557)
[»] scaffold0077 (1 HSPs)
scaffold0077 (139-268)||(36732-36869)
[»] scaffold0158 (1 HSPs)
scaffold0158 (140-249)||(25532-25640)
[»] scaffold0141 (2 HSPs)
scaffold0141 (139-214)||(22857-22932)
scaffold0141 (139-214)||(27112-27187)
[»] scaffold0124 (1 HSPs)
scaffold0124 (139-214)||(1453-1528)
[»] scaffold0084 (1 HSPs)
scaffold0084 (139-250)||(55936-56045)
[»] scaffold0772 (1 HSPs)
scaffold0772 (139-214)||(5846-5921)
[»] scaffold0079 (1 HSPs)
scaffold0079 (15-123)||(3785-3897)
[»] scaffold0118 (1 HSPs)
scaffold0118 (139-213)||(34266-34340)
[»] scaffold0066 (1 HSPs)
scaffold0066 (139-214)||(45338-45413)
[»] scaffold0207 (1 HSPs)
scaffold0207 (139-213)||(18026-18100)
[»] scaffold0125 (1 HSPs)
scaffold0125 (139-213)||(41965-42039)
[»] scaffold0413 (1 HSPs)
scaffold0413 (137-214)||(5947-6024)
[»] scaffold0023 (1 HSPs)
scaffold0023 (139-239)||(48903-49002)
[»] scaffold0467 (1 HSPs)
scaffold0467 (151-214)||(10213-10276)
[»] scaffold0335 (1 HSPs)
scaffold0335 (139-213)||(5434-5508)
[»] scaffold0173 (1 HSPs)
scaffold0173 (139-213)||(5549-5623)
[»] scaffold0029 (1 HSPs)
scaffold0029 (151-213)||(49710-49772)
[»] scaffold0816 (1 HSPs)
scaffold0816 (190-255)||(2875-2942)
[»] scaffold0215 (2 HSPs)
scaffold0215 (154-213)||(9223-9282)
scaffold0215 (154-213)||(16121-16180)
[»] scaffold0057 (1 HSPs)
scaffold0057 (15-66)||(6082-6133)
[»] scaffold0361 (1 HSPs)
scaffold0361 (163-213)||(3528-3578)
[»] scaffold0103 (1 HSPs)
scaffold0103 (190-255)||(34034-34102)
[»] scaffold0037 (1 HSPs)
scaffold0037 (151-213)||(95310-95372)
[»] scaffold0516 (1 HSPs)
scaffold0516 (140-213)||(12002-12075)
[»] scaffold0359 (1 HSPs)
scaffold0359 (190-252)||(11465-11529)


Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 54685358 - 54685104
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685358 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 54685259  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54685258 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttagacttcaatttagctcctaa 54685159  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54685158 tttcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 54685104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 33342079 - 33342333
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33342079 acatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 33342178  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33342179 gaacaagagaaaaagaattaaccaaatgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 33342278  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33342279 gttcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 33342333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 38168112 - 38168372
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38168112 acatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 38168211  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38168212 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 38168311  T
Q  214 gttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||       |||||||||||||| ||||||||||||    
T  38168312 gttcactccaatccttaattcttcaagctctccctcttctctctaacccttgttcttctct 38168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 53771239 - 53771474
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771239 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 53771338  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  53771339 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 53771438  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  53771439 agctcac-ccaat-cttgattcctcaagctcttctctc 53771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 30153140 - 30153365
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153140 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 30153239  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||  |||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  30153240 gaacaagagaaaaagaattaattaaatgattatgataaaaactaacccccttaccttagatgaagattaatcccaacttagacttctctttagctcctaa 30153339  T
Q  214 gttcactccaatccttaattcttcaag 240  Q
    | |||| ||||| ||| ||||||||||    
T  30153340 gctcaccccaat-cttgattcttcaag 30153365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 16261651 - 16261886
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16261651 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattacgcata 16261750  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  16261751 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctccta 16261850  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  16261851 agctcac-ccaat-cttgattcctcaagctcttctctc 16261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 15 - 212
Target Start/End: Original strand, 28558370 - 28558567
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  28558370 catcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgg 28558469  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  28558470 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttaccttagataaagattaatcccaacttaggcttcaattttgctccta 28558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 23492571 - 23492771
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23492571 acatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 23492670  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||| || ||||   ||||||||| |||||||||    
T  23492671 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 23492770  T
Q  214 g 214  Q
    |    
T  23492771 g 23492771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 7854180 - 7854336
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7854180 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 7854279  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  7854280 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 7854336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 17956041 - 17955885
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17956041 acatcaaattaacatattcagacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcata 17955942  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  17955941 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 17955885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 45581830 - 45581976
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45581830 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatag 45581929  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaaccc 161  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  45581930 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 45581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 55513068 - 55513224
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  55513068 acatcgaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcata 55513167  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  55513168 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 55513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 3992748 - 3992904
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  3992748 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttgagttcatgataattacttattctcataatcaattatgcata 3992847  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  3992848 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 3992904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 54038181 - 54038025
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  54038181 acatcaaattaacatattcaaacatatatctacaatataagcacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcata 54038082  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  54038081 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 54038025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 2844389 - 2844545
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  2844389 acatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgggttcatgataatcgcttattcccataatcaattatgcata 2844488  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||| |||||||||||||| ||| |||||||||| ||||| |||||||| ||||||||    
T  2844489 gaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttacctt 2844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 13839200 - 13839329
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  13839200 atgattatgatgaagactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaagctcactccaatcctcaattcttca 13839299  T
Q  239 agttcttctctctaacctttgttcttctct 268  Q
    ||||||||||||||||| || |||||||||    
T  13839300 agttcttctctctaaccctttttcttctct 13839329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 18970119 - 18970231
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  18970119 acatcaaattaacatacttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcata 18970218  T
Q  114 gaacaagagaaaa 126  Q
    ||| |||||||||    
T  18970219 gaaaaagagaaaa 18970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 12030105 - 12029970
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||| || |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  12030105 atgattatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 12030006  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  12030005 agctctccctcttctctctaacccttgttcttctct 12029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 2050115 - 2050249
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaaactcactccaat-cttgattcttca 2050213  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  2050214 agctctccctcttctctctaacccttgttcttctct 2050249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 17912430 - 17912330
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||| || |||||||||||||||||||||| ||||||||| |||| ||||||||    
T  17912430 atgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaagctcactccaa-ccttgattcttca 17912332  T
Q  239 ag 240  Q
    ||    
T  17912331 ag 17912330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 19260781 - 19260647
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||| |||  |||||||||| ||| ||||||||    
T  19260781 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaatctcactccaat-cttgattcttca 19260683  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  19260682 agctctccctcttctctctaacccttgttcttctct 19260647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 48421776 - 48421855
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  48421776 catcaaattaacatactcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 11986112 - 11986003
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||||| |||| |||||  || ||||||||    
T  11986112 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaat--ttgattcttca 11986015  T
Q  239 agttcttctctc 250  Q
    |  |||||||||    
T  11986014 aactcttctctc 11986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 5240628 - 5240527
Alignment:
Q  172 gatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttc 265  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||       |||||||||||||| |||||||||    
T  5240628 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 5240530  T
Q  266 tct 268  Q
    |||    
T  5240529 tct 5240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 15550797 - 15550876
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||    
T  15550797 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattc 15550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 13954836 - 13954728
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| |||| |||||  |  ||||||||    
T  13954836 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcac-ccaat--tggattcttca 13954740  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  13954739 agttcttctctc 13954728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 45861122 - 45861230
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| |||| |||||  |  ||||||||    
T  45861122 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcac-ccaat--tggattcttca 45861218  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  45861219 agttcttctctc 45861230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 2449184 - 2449109
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 2449109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 15615137 - 15615212
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| |||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaag 15615212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 51961065 - 51960932
Alignment:
Q  137 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattctt 236  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||| ||||| |||| ||||||  ||||| | ||| ||| ||||||    
T  51961065 aaatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctcctagattcaccctaattcttgattctt 51960966  T
Q  237 caagttcttc--tctctaacctttgttcttctct 268  Q
    ||||||  ||  ||||||||| |||||| |||||    
T  51960965 caagtttctccttctctaacccttgttcctctct 51960932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 14285289 - 14285363
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| |||||| |||||| ||||||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 14842519 - 14842444
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| || ||||   ||||||||| ||||||||||    
T  14842519 atgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctcctaag 14842444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 19947026 - 19947100
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| |||| |||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 19947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 11402789 - 11402898
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||| | ||| ||||||||||| ||| || || ||||||||||||||  |||  |||||  ||||||||||||||  |||| || || |||||||    
T  11402789 catcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttcacaataatcacttattcaaataagcacttgtgcatag 11402888  T
Q  115 aacaagagaa 124  Q
    ||| ||||||    
T  11402889 aactagagaa 11402898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 17393636 - 17393735
Alignment:
Q  18 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctca--taatcaattatgcataga 115  Q
    ||||||||||||  |||||||||| |||||||   ||||||||||||||  |||  |||||| ||||||||||| |||||  ||| ||||||||||||||    
T  17393636 caaattaacatacccaaacatatcactacaactagagcacgaatttcaacaattaagttcataataatcactta-tctcaattaagcaattatgcataga 17393734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 8268682 - 8268607
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 8268607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 8275782 - 8275707
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 8275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 18896993 - 18896918
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| ||||  |||||||| ||||||||||| ||||||||| || ||||   ||||||||| ||||||||||    
T  18896993 atgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctcctaag 18896918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 12264741 - 12264668
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||||||| ||||  |||||||| |||||||| || || ||||||||||||| |  ||||||||| ||||||||    
T  12264741 atgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctccta 12264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 10040 - 9785
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaatt-atgcat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  10040 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattttcataatcaatttatgcat 9941  T
Q  113 agaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9940 agaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctccta 9841  T
Q  213 agttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9840 agttcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 9785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 1035 - 781
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1035 acatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 936  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  935 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 836  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  835 gttcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 9652953 - 9652699
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9652953 acatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 9652854  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9652853 gaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaa 9652754  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  9652753 gttcactccaatccttaattcttcaagttcttctctctaacccttattcttctct 9652699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 21274106 - 21273872
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21274106 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21274007  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||| ||    
T  21274006 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaaccc-cttaccttagataaagattaatcccaacttaggcttcactttagctcata 21273908  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  21273907 agctcac-ccaat-cttgattcctcaagctcttctctc 21273872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 22274920 - 22275076
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22274920 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 22275019  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||    
T  22275020 gaacaagagaaaaagaattaactaaatgattatgataaaggctaacccccttacctt 22275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 22284153 - 22284309
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  22284153 acattaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcata 22284252  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  22284253 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 22284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 25213252 - 25213403
Alignment:
Q  20 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25213252 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 25213351  T
Q  119 agagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  25213352 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 15633418 - 15633568
Alignment:
Q  20 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaa 119  Q
    |||||||||| |||||| |||| | | ||||  |||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15633418 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaa 15633517  T
Q  120 gagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||| || ||||||| |||||||||||||  ||||||||    
T  15633518 gagaaaaagaattaactaagtgattatgataaagactaacctccttacctt 15633568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 22863235 - 22863340
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  22863235 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaagctcaccccaatccttgattcttca 22863334  T
Q  239 agttct 244  Q
    ||||||    
T  22863335 agttct 22863340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 36982396 - 36982291
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| |||| |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  36982396 atgattatgataaagactaacccccttaccttagataaagactaataccaacttaggcttcaatttagctcctcagctcactccaatccttagttcttca 36982297  T
Q  239 agttct 244  Q
    ||||||    
T  36982296 agttct 36982291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 8891549 - 8891648
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||    
T  8891549 atgattatgataaagactaacccctttaccttagataaagattaatcccaacttaggcttcaatttagttcctaagctcactccaatccttgattgttca 8891648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 463043 - 463118
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaag 463118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 7321716 - 7321871
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||| ||||||||||  |||| ||  |||||||||    
T  7321716 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcatag 7321815  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
     | ||||||  |  ||||||| || ||||||| || ||  ||||||| ||||||||    
T  7321816 gaaaagagagtagaaattaactaagtgattataatgaattctaacccccttacctt 7321871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 24341341 - 24341238
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||| |||||||||| ||| || |||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaagctcactccaattcttgatgcttca 24341242  T
Q  239 agtt 242  Q
    ||||    
T  24341241 agtt 24341238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 14906386 - 14906311
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 14906311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 23820388 - 23820463
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 23820463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 20015328 - 20015405
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagtt 216  Q
    ||||| || |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagtt 20015405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 17396599 - 17396492
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||| ||||||||||||||| |||| |||||  |  ||||||||    
T  17396599 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctcac-ccaat--tggattcttca 17396503  T
Q  239 agttcttctct 249  Q
    |||||||||||    
T  17396502 agttcttctct 17396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 19689347 - 19689272
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| |||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaag 19689272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 32466177 - 32466304
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || || ||||||||||||||||||||||||||| |||| ||||| |||  ||||||||    
T  32466177 tgattatgatgaagactaaccc-cttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcac-ccaattcttggttcttcaa 32466274  T
Q  240 gttcttctc-tctaacctttgttcttctct 268  Q
    ||||| | | ||||||| || |||||||||    
T  32466275 gttctccacttctaaccctttttcttctct 32466304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 25265335 - 25265227
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| ||||| || ||| | ||||||||| ||| ||||||||| ||||||||||||| | || |||||  || ||||||||    
T  25265335 atgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaat--ttgattcttca 25265238  T
Q  239 agttcttctct 249  Q
    || ||||||||    
T  25265237 agctcttctct 25265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 33128372 - 33128446
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 12641591 - 12641483
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| |||||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  12641591 atgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 12641495  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  12641494 agttcttctctc 12641483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 20279610 - 20279688
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 93  Q
    ||||||||| | |||  |||||||||||||| ||||| |||||||||||||| ||||  |||||  |||||||||||||    
T  20279610 catcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagttcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 12635817 - 12635709
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  12635817 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 12635721  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  12635720 agttcttctctc 12635709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 12728699 - 12728807
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  12728699 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 12728795  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  12728796 agttcttctctc 12728807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 34824782 - 34824890
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  34824782 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 34824878  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  34824879 agttcttctctc 34824890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 8944153 - 8944228
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaag 8944228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 23774444 - 23774551
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  23774444 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 23774540  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  23774541 gttcttctctc 23774551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 27262176 - 27262244
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt---tcttctctctaacc 255  Q
    |||||||||||||||||||||||  ||  | ||||||||| |||||||||||   ||||||||||||||    
T  27262176 cttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttcctcttctctctaacc 27262244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 28031166 - 28031092
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||| | ||||||||||||| |||| |||||||    
T  28031166 atgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaa 28031092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 21142203 - 21142276
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 21142276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 17459 - 17207
Alignment:
Q  16 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 115  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17459 atcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgggttcatgataatcaattattctcataatcaattatgcataga 17360  T
Q  116 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||||||||||||| | |||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  17359 acaagagaaaaagaattacctaaatgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaagt 17260  T
Q  216 tcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17259 tcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 17207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 21650893 - 21651147
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |    
T  21650893 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaactatgcaca 21650992  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  21650993 gaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaa 21651092  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21651093 gctcactccaatccttaattcttcaagttcttctctctaacccttgttcttctct 21651147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 21205124 - 21205382
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205124 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21205223  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  21205224 gaacaagagaaaaagaattaaccaaatgattatgataaagactaatcc-cttatcttagatgaagattaattccaacttaggcttcaatttagctcctaa 21205322  T
Q  214 gttcactccaatccttaattcttcaagtt------cttctctctaacctttgttcttctct 268  Q
    | |||||||||| ||| |||||||||| |      ||||||||||||| ||||||||||||    
T  21205323 gctcactccaat-cttgattcttcaagctctcccacttctctctaacccttgttcttctct 21205382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 2032008 - 2032263
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2032008 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 2032107  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| ||| |||||| || || |||||||| |||||||| ||| | |||||| || ||||||||||||||||||||||||||    
T  2032108 gaacaagagaaaaagaattaactaaacgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T
Q  214 gttcactccaatccttaattcttcaagttcttctc-tctaacctttgttcttctct 268  Q
    | |||| ||||| ||| |||||||||||||| ||| ||||||| || |||||||||    
T  2032208 gctcaccccaattcttgattcttcaagttctcctcttctaaccctttttcttctct 2032263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 11342883 - 11343081
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342883 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 11342982  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| || ||||||||| || ||| |  ||||||||| ||||||||    
T  11342983 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctccta 11343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 16105847 - 16106040
Alignment:
Q  20 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16105847 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 16105946  T
Q  119 agagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||||| |  ||||   ||||||||| ||||||||    
T  16105947 agagaaaaagaattaatcaaatgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctccta 16106040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 25005019 - 25005240
Alignment:
Q  19 aaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaaca 118  Q
    ||||||||| | ||||||||||| || |||||| ||||||||||||||||||||||||||  ||||||||||||||   | | || |||| |||| ||||    
T  25005019 aaattaacacactcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaaca 25005118  T
Q  119 agagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttca 218  Q
    |  ||||||  |  ||| |||||||||| || ||||||||||| ||||| || ||| | ||||||||| ||||||||||||| |||||||||||  ||||    
T  25005119 attgaaaaacta--aactaaatgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctcctagattca 25005216  T
Q  219 ctccaatccttaattcttcaagtt 242  Q
    ||||||| ||| ||||||||||||    
T  25005217 ctccaattcttgattcttcaagtt 25005240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 27182503 - 27182398
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  27182503 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 27182404  T
Q  239 agttct 244  Q
    ||||||    
T  27182403 agttct 27182398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 23981425 - 23981307
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctc-t 249  Q
    ||||||||||| |||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| |||||||||| ||| ||| |    
T  23981425 aagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattcttcaagatctcctctt 23981326  T
Q  250 ctaacctttgttcttctct 268  Q
    |||||| ||||||||||||    
T  23981325 ctaacccttgttcttctct 23981307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 22662731 - 22662653
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 93  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22662731 catcaaattaacatattcaaatatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 18531018 - 18530917
Alignment:
Q  141 gattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaag 240  Q
    |||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttcaag 18530919  T
Q  241 tt 242  Q
    ||    
T  18530918 tt 18530917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 108760 - 108680
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcac 219  Q
    |||||||| || ||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||| |||||||| ||||    
T  108760 atgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaagctcac 108680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 20623286 - 20623361
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 20623361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 21233474 - 21233399
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 21233399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 22053785 - 22053682
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||| ||||| ||||||||||||| ||||| |||| ||| ||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttagacttcactttagctcctaagctcacttcaattcttgattcttca 22053686  T
Q  239 agtt 242  Q
    ||||    
T  22053685 agtt 22053682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 37053061 - 37053136
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 37053136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 16536514 - 16536589
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||  || ||| |||||||||||||||||||||||    
T  16536514 atgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaag 16536589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 23507270 - 23507345
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||| |||||||| |||||| |||| ||||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaag 23507345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 25900352 - 25900277
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||| |||||||||||||||    
T  25900352 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaag 25900277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 32951024 - 32951121
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctctc 250  Q
    ||||||||||| ||||||||  || | ||||||| | ||||||| ||||||||||||||||||| | || |||||  || |||||||||| |||||||||    
T  32951024 aagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaagcttaccccaat--ttgattcttcaagctcttctctc 32951121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 7529240 - 7529299
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcc 210  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||||||||    
T  7529240 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcc 7529299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 1219469 - 1219361
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  1219469 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 1219373  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  1219372 agttcttctctc 1219361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 23328865 - 23328972
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  23328865 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 23328961  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  23328962 gttcttctctc 23328972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 24616469 - 24616576
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  24616469 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 24616565  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  24616566 gttcttctctc 24616576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 24712845 - 24712952
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  24712845 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 24712941  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  24712942 gttcttctctc 24712952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 24745863 - 24745970
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  24745863 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 24745959  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  24745960 gttcttctctc 24745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 7425631 - 7425707
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  7425631 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 7425707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 2029119 - 2029373
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2029119 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 2029218  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  2029219 gaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaa 2029318  T
Q  214 gttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||    
T  2029319 gttcactccaatttttaattcttcaagttcttctctctaacccttgctcttctct 2029373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 3049780 - 3050040
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049780 acatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 3049879  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  3049880 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcttaa 3049979  T
Q  214 gttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||       |||||||||||||| ||||||||||||    
T  3049980 gttcactccaatccttaattcttcaagctctccctcttctctctaacccttgttcttctct 3050040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 42056346 - 42056140
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42056346 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 42056247  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  42056246 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 42056147  T
Q  213 agttcac 219  Q
    || ||||    
T  42056146 agctcac 42056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 2190243 - 2190008
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2190243 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcacttattctcataatcaattatgcata 2190144  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| ||||| |||||||  |||||||| ||| ||||||||||||||||||||||||| |||| ||||||    
T  2190143 gaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactccta 2190044  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  2190043 agctcac-ccaat-cttgattcctcaagctcttctctc 2190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 126613 - 126769
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126613 acatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 126712  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||| ||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  126713 gaacaatagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 126769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 1937074 - 1936918
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937074 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 1936975  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||  ||||||||    
T  1936974 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacctccttacctt 1936918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 32494103 - 32493947
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32494103 acatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 32494004  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  32494003 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 32493947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 111326 - 111170
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  111326 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcata 111227  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  111226 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 15516901 - 15516720
Alignment:
Q  32 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  131 ttaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||||||||||||||| |||||||||||||| ||||| || || || |||||| || ||||   ||||||||| ||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctccta 15516720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 11580693 - 11580588
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  11580693 atgattatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttgattcttca 11580594  T
Q  239 agttct 244  Q
    ||||||    
T  11580593 agttct 11580588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 16212071 - 16212170
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  16212071 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat-cttgattcttca 16212169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 13036958 - 13036865
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttct 244  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  13036958 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagcttactccaatccttgattcttcaagttct 13036865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 36052971 - 36053105
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  36052971 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 36053069  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  36053070 agctctccctcttctctctaaccattgttcttctct 36053105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 13352151 - 13352259
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| | ||||||||| ||||||||| |||||||||||||| | |||||||||  ||||||||||||||  |||| || ||||||||||    
T  13352151 catcaaattaacatactgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatag 13352250  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  13352251 aaaaagaga 13352259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 39291565 - 39291457
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  || ||||||  ||||||||||||||  ||||  | ||||||||||    
T  39291565 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatag 39291466  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  39291465 aaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 15709469 - 15709572
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || |||||||| || |||||||| ||| | |||||| | |||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  15709469 atgattatgatgaagactaatcctcttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 15709568  T
Q  239 agtt 242  Q
    ||||    
T  15709569 agtt 15709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 17817359 - 17817258
Alignment:
Q  172 gatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttc 265  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||       |||||||||||||| |||||||||    
T  17817359 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 17817261  T
Q  266 tct 268  Q
    |||    
T  17817260 tct 17817258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 19049642 - 19049743
Alignment:
Q  172 gatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttc 265  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||       |||||||||||||| |||||||||    
T  19049642 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 19049740  T
Q  266 tct 268  Q
    |||    
T  19049741 tct 19049743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 25124448 - 25124550
Alignment:
Q  137 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattctt 236  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||||||||||| |||||||||| ||| ||||||    
T  25124448 aaatgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaagctcactccaat-cttgattctt 25124546  T
Q  237 caag 240  Q
    ||||    
T  25124547 caag 25124550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 7293333 - 7293441
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| | || |||||  |  ||||||||    
T  7293333 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttac-ccaat--tggattcttca 7293429  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  7293430 agttcttctctc 7293441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 11516544 - 11516619
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 11516619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 15441510 - 15441435
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 15441435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 30262075 - 30262000
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 30262000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 13321334 - 13321443
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||| ||||||||| ||||||||||||| | || |||||  || ||||||||    
T  13321334 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaat--ttgattcttca 13321431  T
Q  239 agttcttctctc 250  Q
    || |||||||||    
T  13321432 agctcttctctc 13321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 36024452 - 36024556
Alignment:
Q  139 atgattatcataaagactaacccac-ttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttc 237  Q
    |||||||| || ||||||||||| | ||||||| ||| | |||||| | |||||||||||||| |||||||| |||| |||||||||| ||| |||||||    
T  36024452 atgattatgatgaagactaaccccccttaccttagattatgattaacctcaacttaggcttcactttagctcataagctcactccaattcttgattcttc 36024551  T
Q  238 aagtt 242  Q
    |||||    
T  36024552 aagtt 36024556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 14113935 - 14113860
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||| |||||    
T  14113935 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaag 14113860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 25292283 - 25292209
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||  || ||| |||||||||||||||||||||||    
T  25292283 tgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaag 25292209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 47480976 - 47480902
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| |||||||    
T  47480976 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaa 47480902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 14423574 - 14423511
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    ||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||| |||||    
T  14423574 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaag 14423511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 15977894 - 15977820
Alignment:
Q  18 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttat 92  Q
    |||||||||||| ||||||||||| |||||||   |||| |||||||||| |||  |||||| ||||||||||||    
T  15977894 caaattaacatactcaaacatatcactacaactagagcatgaatttcaaacatttagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 10000318 - 10000245
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 10000245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 13758677 - 13758785
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  13758677 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 13758773  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  13758774 agttcttctctc 13758785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 18151357 - 18151259
Alignment:
Q  18 caaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 116  Q
    ||||||||||||   || |||||| ||||||||| |||||||||||||| | ||  |||||  ||||||||||||||  ||||  | ||||||||||||    
T  18151357 caaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagttcacaataatcacttattcaaataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 48622614 - 48622541
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 48622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 3895395 - 3895462
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt--tcttctctctaacc 255  Q
    ||||||||||||||| |||||||  |  || ||||||||| |||||||||||  ||||||||||||||    
T  3895395 cttaggcttcaattttgctcctagctcaaccccaatccttgattcttcaagtcctcttctctctaacc 3895462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 15927875 - 15927951
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  15927875 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 15927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 18979970 - 18979894
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  18979970 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 18979894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 39046504 - 39046437
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt--tcttctctctaacc 255  Q
    |||| |||||||||| |||||||  || || ||||||||| |||||||||||  ||||||||||||||    
T  39046504 cttaagcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcctcttctctctaacc 39046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 55779 - 56007
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55779 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 55878  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  55879 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaa 55978  T
Q  214 gttcactccaatccttaattcttcaagtt 242  Q
    | || ||||||| ||| ||||||||||||    
T  55979 gctctctccaattcttgattcttcaagtt 56007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 108179 - 108032
Alignment:
Q  68 gattgggttcatgataatcacttattctcataatcaattatgcatagaac-aagagaaaaagaattaaccaaatgattatcataaagactaacccactta 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  167 ccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  108079 ccttagatgaagattaattccaacttaggcttcaattcagctcctaag 108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 24385809 - 24385584
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24385809 acatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgcata 24385710  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  24385709 gaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaa 24385610  T
Q  214 gttcactccaatccttaattcttcaag 240  Q
    | |||||||||| ||| ||||||||||    
T  24385609 gctcactccaat-cttgattcttcaag 24385584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 41506866 - 41506611
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41506866 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 41506767  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| || || |||||||| |||||||| ||| | |||||| || |||||||||||||||||||||| |||    
T  41506766 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcttaa 41506667  T
Q  214 gttcactccaatccttaattcttcaagttcttctc-tctaacctttgttcttctct 268  Q
    | |||| ||||| ||| |||||||||||||| ||| ||||||| || |||||||||    
T  41506666 gctcaccccaattcttgattcttcaagttctcctcttctaaccctttttcttctct 41506611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 24716919 - 24716763
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24716919 acatcaaattaacatattcaaacatatctctaccatataaccacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcata 24716820  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  24716819 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 24716763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 39115473 - 39115629
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39115473 acatcaaattaacatattcaaacatatctttacaacataagcacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcata 39115572  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| || || |||||| | ||||||||    
T  39115573 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacacccttacctt 39115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 274642 - 274797
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  274642 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 274741  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  274742 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 641207 - 641052
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  641207 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 641108  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  641107 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 827013 - 826858
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  827013 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 826914  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
     ||||||||||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  826913 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttacctt 826858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 17502360 - 17502468
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||  |||| || ||||||||||    
T  17502360 catcaaattaacatactcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatag 17502459  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  17502460 aaaaagaga 17502468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 43373424 - 43373290
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  43373424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 43373326  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||      ||||||||| ||||| ||||||||||||    
T  43373325 agctctccttcttctctttaacccttgttcttctct 43373290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 21259547 - 21259304
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  21259547 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 21259448  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaat--cccaacttaggcttcaatttagctccta 212  Q
    || ||||||  |  ||||||| || ||||||| || ||  ||||||| |||||||| | |  ||||||||  || | |||| |||||||||||||||||     
T  21259447 aaaaagagagtagaaattaactaagtgattatgatgaattctaacccccttaccttagtt--agattaattccctagcttaagcttcaatttagctcct- 21259351  T
Q  213 agttcac-tccaatccttaattcttcaagt---tcttctctctaacc 255  Q
    || || | |||||||||| | |||||||||   ||||||||||||||    
T  21259350 agctctcttccaatccttgaatcttcaagttcctcttctctctaacc 21259304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 24928748 - 24928614
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||||||||||||  ||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||    
T  24928748 atgattatgataaagactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaagctcactccaat-cttgattcttca 24928650  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  24928649 agatctccctcttctctctaacccttgttcttctct 24928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 4234054 - 4234162
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| || |||||| ||||| ||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  4234054 catcaaattaacatactcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatag 4234153  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  4234154 aaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 23218076 - 23218184
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  23218076 catcaaattaacatactcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 23218175  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  23218176 aaaaagaga 23218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16193674 - 16193588
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatc 226  Q
    |||||||| |||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  16193674 atgattatgataaagactaaccc-cttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaagctcactccaatc 16193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 22321503 - 22321437
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatg 80  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22321503 acatcaaattaacatattcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 7000551 - 7000422
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| || || |||||||| ||||| || ||| | |||||| || ||||||||||||||||||||||||||| |||| ||||| ||| ||||| |||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattctacaa 7000452  T
Q  240 gttcttctc-tctaacctttgttcttctct 268  Q
    ||||| ||| ||||||| || |||||||||    
T  7000451 gttctcctcttctaaccctttttcttctct 7000422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 22907160 - 22907052
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| | || |||||  |  ||||||||    
T  22907160 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttac-ccaat--tggattcttca 22907064  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  22907063 agttcttctctc 22907052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 5238404 - 5238479
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 5238479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 24661194 - 24661119
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 24661119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 43685863 - 43685938
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 43685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 21494376 - 21494314
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||    
T  21494376 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 22886654 - 22886728
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| |||||| |||||| ||||||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 3431208 - 3431134
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||| ||||| ||||| ||||||| ||||||||||||    
T  3431208 atgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaa 3431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 18118337 - 18118259
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 93  Q
    ||||||||| | |||  |||||||||||||| ||||  |||||||||||||| ||||  |||||  |||||||||||||    
T  18118337 catcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagttcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 13443 - 13208
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13443 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 13344  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  13343 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 13244  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  13243 agctcac-ccaat-cttgattcctcaagctcttctctc 13208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 15272369 - 15272134
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272369 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 15272270  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  15272269 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 15272170  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  15272169 agctcac-ccaat-cttgattcctcaagctcttctctc 15272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 14951960 - 14952161
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951960 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 14952059  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||    
T  14952060 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 14952159  T
Q  214 gt 215  Q
    ||    
T  14952160 gt 14952161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 5682584 - 5682429
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682584 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 5682485  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||| |||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  5682484 gaacaagaggaaaa-aattaactaaatgattatgataaaaactaacccacttacctt 5682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 25119264 - 25119108
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25119264 acatcaaattaacatattcaaacatatctctaccacataagcacgaattttcaagattgggttcatgataatcacttattcccataatcaattatgcata 25119165  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||    
T  25119164 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaactcccttacctt 25119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 15136010 - 15135830
Alignment:
Q  69 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  168 cttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctctc 250  Q
    ||| ||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||| |||| ||||| |||||||||    
T  15135910 cttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-ccaat-cttgattcctcaagctcttctctc 15135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 13246737 - 13246842
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  13246737 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 13246836  T
Q  239 agttct 244  Q
    ||||||    
T  13246837 agttct 13246842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 122194 - 122328
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||||||||||||||| |||||||||||||| |||| |||||||||| ||| ||||||||    
T  122194 atgattatgataaagactaatccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaagctcactccaat-cttgattcttca 122292  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  122293 agctctccctcttctctctaacccttgttcttctct 122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 19559557 - 19559689
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||  ||||||||||| ||||||||| |||| ||||||||||  |||||| ||| ||||||||||||||  |||| || |||||||||    
T  19559557 acatcaaattaacatgctcaaacatatcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcata 19559656  T
Q  114 gaacaagagaaaaagaattaaccaaatgattat 146  Q
    ||| |||||| ||  ||||||| || |||||||    
T  19559657 gaaaaagagagaagaaattaactaattgattat 19559689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 15675041 - 15674938
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 15674942  T
Q  239 agtt 242  Q
    ||||    
T  15674941 agtt 15674938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 49071885 - 49071994
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||| ||||||||||| |||||| || |||||||||||||| | |||||||||  || |||||||||||  |||| || |||||||||    
T  49071885 acatcaaattaacatactcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcata 49071984  T
Q  114 gaacaagaga 123  Q
    ||| ||||||    
T  49071985 gaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 10104202 - 10104099
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||| | ||||||||||||| |||||||||| ||| ||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaagctcactccaattcttgattcttca 10104103  T
Q  239 agtt 242  Q
    ||||    
T  10104102 agtt 10104099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 55376525 - 55376397
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || || ||||||||||||||||||||||||||| |||| ||||| |||  ||||||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcac-ccaattcttggttcttcaa 55376427  T
Q  240 gttcttctc-tctaacctttgttcttctct 268  Q
    ||||| ||| ||||||| || |||||||||    
T  55376426 gttctcctcttctaaccctttttcttctct 55376397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 26680517 - 26680625
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| | || |||||  |  ||||||||    
T  26680517 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttac-ccaat--tggattcttca 26680613  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  26680614 agttcttctctc 26680625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 16609045 - 16608970
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 16608970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 33241011 - 33241114
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||  |||| |||||||| |||||||||| ||| ||||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcgctttaactcctaagctcactccaattcttgattcttca 33241110  T
Q  239 agtt 242  Q
    ||||    
T  33241111 agtt 33241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 40885475 - 40885371
Alignment:
Q  155 ctaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactcc-aatccttaattcttcaagt---tcttctctc 250  Q
    ||||||| |||||||| ||| | ||||||||| ||||||||||||| |||||||||||  |||||||| ||||||| |||||||||||   |||||||||    
T  40885475 ctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctagattcactccaaatccttgattcttcaagttcctcttctctc 40885376  T
Q  251 taacc 255  Q
    |||||    
T  40885375 taacc 40885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 31132628 - 31132728
Alignment:
Q  142 attatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt 241  Q
    ||||| || ||||||||||| |||||||| ||| | |||||| | ||||||||||| || ||||||||||||| |||||||||| ||| ||||| |||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaagctcactccaattcttgattctacaagt 31132727  T
Q  242 t 242  Q
    |    
T  31132728 t 31132728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 16327872 - 16327797
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| |||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttaccttatatgaagattaggccaaacctaggcttcaatttagctcctaag 16327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 34177691 - 34177617
Alignment:
Q  20 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||  |||||||| ||||  ||||||||||||||    
T  34177691 aattaacatactcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 32460623 - 32460561
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||    
T  32460623 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 10488879 - 10488954
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||  |||||||| ||||  |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  10488879 atgattaagataaagaccaaccaccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 10488954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 13048158 - 13048092
Alignment:
Q  148 ataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||||||||| |||| ||| |||||||||||  || ||| |||||||||||||| ||||||||    
T  13048158 ataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaag 13048092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 22738577 - 22738650
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 22738650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 20001030 - 20001138
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  ||||||||    
T  20001030 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttca 20001126  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  20001127 agttcttctctc 20001138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 26339327 - 26339434
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  26339327 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 26339423  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  26339424 gttcttctctc 26339434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 7132014 - 7131940
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| ||||  |||||||| |||||||| || |||||||||||| ||||   ||||||||| |||||||||    
T  7132014 atgattatgataataactaacccccttaccttagaagaagattaatccaaactcttgcttcaattcagctcctaa 7131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 8045272 - 8045346
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||| | ||||||| ||||| ||||||||||||    
T  8045272 atgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcactttagctcctaa 8045346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23269809 - 23269756
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttc 243  Q
    ||||||||||||||| |||||||  |  |||||||||||| |||||||||||||    
T  23269809 cttaggcttcaattttgctcctagctcaactccaatccttgattcttcaagttc 23269756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 14500268 - 14500208
Alignment:
Q  19 aaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcat 79  Q
    ||||||||||| |||||| |||| | | ||||  |||||||| ||||||||||||||||||    
T  14500268 aaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 15287194 - 15287118
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  15287194 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 15287118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 15294303 - 15294227
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  15294303 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 15294227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 6601 - 6375
Alignment:
Q  13 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  6601 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacctattatcataatcaattatgcat 6502  T
Q  113 agaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| | || ||||||||||||||||||||||||||||||||    
T  6501 agaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctccta 6402  T
Q  213 agttcactccaatccttaattcttcaag 240  Q
    || |||||||||| ||| ||||||||||    
T  6401 agctcactccaat-cttgattcttcaag 6375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 7e-89; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 23995121 - 23995356
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23995121 acatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgggttcatgataatcacttattctcataatcaattatgcata 23995220  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  23995221 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctccta 23995320  T
Q  213 agttcactccaatccttaattcttcaagttcttctctc 250  Q
    || |||| ||||| ||| |||| ||||| |||||||||    
T  23995321 agctcac-ccaat-cttgattcctcaagctcttctctc 23995356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 26089933 - 26090159
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089933 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 26090032  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | | | | | ||||  ||||||||||||| |||||||||||    
T  26090033 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctccta 26090132  T
Q  213 agttcactccaatccttaattcttcaag 240  Q
    |  |||||||||| ||| ||||||||||    
T  26090133 acctcactccaat-cttgattcttcaag 26090159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 15742275 - 15742078
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15742275 catcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat-g 15742177  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  15742176 aacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 15742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 18002553 - 18002353
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18002553 acatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatgcccataatcaattatgcata 18002454  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| | | | ||||||||  ||||||| ||||| |||||||||||    
T  18002453 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctccta 18002354  T
Q  213 a 213  Q
    |    
T  18002353 a 18002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 19983349 - 19983193
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19983349 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcata 19983250  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  19983249 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 19983193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 35015214 - 35015058
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35015214 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 35015115  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  35015114 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 35015058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 4991271 - 4991427
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4991271 acatcaaat-aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 4991369  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
     || |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  4991370 aaatcaagagaaaaagaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 18583515 - 18583671
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  18583515 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaatgatgcata 18583614  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||| |||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  18583615 gaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctt 18583671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 23148303 - 23148432
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 23148402  T
Q  239 agttct-tctctctaacctttgttcttctct 268  Q
    |||||| | |||| ||||||| |||||||||    
T  23148403 agttctctttctc-aaccttttttcttctct 23148432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 27751742 - 27751872
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  27751742 atgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattcttca 27751841  T
Q  239 agttcttctc-tctaacctttgttcttctct 268  Q
    |||||| ||| ||||||| || |||||||||    
T  27751842 agttctcctcttctaaccatttttcttctct 27751872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 23153754 - 23153859
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  23153754 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 23153853  T
Q  239 agttct 244  Q
    ||||||    
T  23153854 agttct 23153859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 22585602 - 22585494
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  22585602 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22585503  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  22585502 aaaaagaga 22585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 22590433 - 22590325
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  22590433 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22590334  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  22590333 aaaaagaga 22590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 15889762 - 15889631
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||  |||||||| |||||  |||| || ||||||||||    
T  15889762 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacacttatgcatag 15889663  T
Q  115 aacaagagaaaaagaattaaccaaatgattat 146  Q
    || |||||| ||  ||||||| || |||||||    
T  15889662 aaaaagagagaagaaattaactaagtgattat 15889631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 15004963 - 15004855
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||    
T  15004963 acatcaaatta-catactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 15004865  T
Q  114 gaacaagaga 123  Q
    ||| ||||||    
T  15004864 gaaaaagaga 15004855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 25640611 - 25640504
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || ||||||||||    
T  25640611 catcaaattaacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 25640513  T
Q  115 aacaagaga 123  Q
    || ||||||    
T  25640512 aaaaagaga 25640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 29666181 - 29666290
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||||||||  || ||| | ||||||||| ||||||||||||||||||||||||||| |||| |||||  || ||||||||    
T  29666181 atgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaat--ttgattcttca 29666278  T
Q  239 agttcttctctc 250  Q
    || |||||||||    
T  29666279 agctcttctctc 29666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 1650053 - 1649978
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| |||||||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaag 1649978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 35009384 - 35009253
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| ||||| || ||| | ||||||||| ||||| ||||||| |||||||| ||  ||||| ||||| ||| ||||||||    
T  35009384 atgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagctcttagattcaccccaattcttgattcttca 35009285  T
Q  239 agttcttc--tctctaacctttgttcttctct 268  Q
    ||||  ||  ||||||||| |||||| |||||    
T  35009284 agtttctccttctctaacccttgttcctctct 35009253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 32276691 - 32276617
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| |||||| |||||| ||||||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 14128552 - 14128502
Alignment:
Q  192 taggcttcaatttagctcctaagttcactccaatccttaattcttcaagttc 243  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  14128552 taggcttcaatttagctcctaagctcac-ccaatccttagttcttcaagttc 14128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 16299906 - 16299844
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  16299906 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 16299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 18823315 - 18823241
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||  ||||| ||||||||||||    
T  18823315 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcactttagctcctaa 18823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 18839170 - 18839096
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| |||||| |||||| ||||||| ||||    
T  18839170 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcactttagcttctaa 18839096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 16232199 - 16232275
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagt 215  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||||    
T  16232199 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagt 16232275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 193545 - 193295
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  193545 acatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgggttcatgataatcacttattctcataatcaattatgcata 193455  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  193454 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaa 193355  T
Q  214 gttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttctct 268  Q
    | |||||||||| ||||||||||||||       |||||||||||||| ||||||||||||    
T  193354 gctcactccaat-cttaattcttcaagctctccctcttctctctaacccttgttcttctct 193295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 15 - 268
Target Start/End: Complemental strand, 12574 - 12316
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  12574 catcaaattaacatattcaaacatatctctacaacataagcacaaatttcaaagattgggttcatgataataacttattcccataatcaattatgcatag 12475  T
Q  115 aacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    ||||| ||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||| |||||||||||| |||||||||||||||||||    
T  12474 aacaaaagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaag 12375  T
Q  215 ttcactccaatccttaattcttcaag------ttcttctctctaacctttgttcttctct 268  Q
     ||| |||||| ||| ||||||||||       |||||||||||||| ||||||||||||    
T  12374 ctcaatccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttctct 12316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 6e-80; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 15861483 - 15861285
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15861483 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 15861384  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || || |||||| || ||||   ||||||||| ||||||||    
T  15861383 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 15861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 21860209 - 21860365
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21860209 acatcaaattaacatattcaaacatatctctaccacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 21860308  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  21860309 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaacccccttacctt 21860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 44035028 - 44034872
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44035028 acatcaaattaacatattcaaacatatatctacaacataaacaagaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 44034929  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  44034928 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 44034872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22367216 - 22367296
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22367216 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 37844406 - 37844301
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  37844406 atgattatgataaagactaacccccttaccttagataaaaattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 37844307  T
Q  239 agttct 244  Q
    ||||||    
T  37844306 agttct 37844301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 20445987 - 20446092
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  20445987 atgattatgataaagactaactcccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaatccttagttcttca 20446086  T
Q  239 agttct 244  Q
    ||||||    
T  20446087 agttct 20446092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 20893583 - 20893478
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  20893583 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 20893484  T
Q  239 agttct 244  Q
    ||||||    
T  20893483 agttct 20893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 20531751 - 20531856
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||    |||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  20531751 atgattatgataaagactaatttccttaccttagataaagattaatcccaacttaggcttcaatttatctcctaagctcactccaatccttagttcttca 20531850  T
Q  239 agttct 244  Q
    ||||||    
T  20531851 agttct 20531856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 20913335 - 20913469
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||  |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  20913335 atgattacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 20913433  T
Q  239 agt------tcttctctctaacctttgttcttctct 268  Q
    | |      |||||||||||||| ||||||||||||    
T  20913434 atttctccctcttctctctaacccttgttcttctct 20913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 41218667 - 41218759
Alignment:
Q  78 atgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || || || |||||||| ||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttacctt 41218759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 20931650 - 20931784
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||| ||| ||||    
T  20931650 atgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaagctcactccaat-cttgattattca 20931748  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  20931749 agctctccctcttctctctaacccttgttcttctct 20931784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 45051726 - 45051801
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| |||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaag 45051801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 51452809 - 51452884
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||  |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 51452884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 7640882 - 7640775
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||| | || |||||  |  |||||||||    
T  7640882 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttac-ccaat--tggattcttcaa 7640786  T
Q  240 gttcttctctc 250  Q
    |||||||||||    
T  7640785 gttcttctctc 7640775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 80062 - 80218
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80062 acatcaaattaacatattcaaacatatctctaccacataagcacaaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 80161  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  80162 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctt 80218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 4504 - 4304
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4504 acatcaaattaacatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 4405  T
Q  114 gaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 212  Q
    |||  ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| | | | ||||||||| |||||  |||||| |||||||||||    
T  4404 gaatgaagagaaaaagaattaaccaaatgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctccta 4305  T
Q  213 a 213  Q
    |    
T  4304 a 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 85 - 5
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  85 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 6140 - 5984
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6140 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 6041  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  6040 gaacaagagaaaaagaattaactatatgattatgatgaaaactaacccccttacctt 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 5923 - 5778
Alignment:
Q  25 acatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 124  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  125 aaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||||| | |||||||| || || |||||||| ||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttacctt 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 162233 - 162079
Alignment:
Q  16 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162233 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 162134  T
Q  116 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  162133 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 162079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 166319 - 166165
Alignment:
Q  16 atcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166319 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 166220  T
Q  116 acaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||||||| | |||||||| || || |||||||| ||||||||    
T  166219 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 166165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 31337 - 31181
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31337 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 31238  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||||||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  31237 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttacctt 31181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 41507 - 41663
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41507 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 41606  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||||||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  41607 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttacctt 41663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 37012 - 36904
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||| | || |||||  |  ||||||||    
T  37012 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttac-ccaat--tggattcttca 36916  T
Q  239 agttcttctctc 250  Q
    ||||||||||||    
T  36915 agttcttctctc 36904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 130760 - 130911
Alignment:
Q  20 aattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-ca 118  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  130760 aattaacgtatccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 130859  T
Q  119 agagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  130860 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 89398 - 89281
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttc-tct 249  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||| | |||    
T  89398 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaattcttgattcttcaagttctccttct 89299  T
Q  250 ctaacctttgttcttctct 268  Q
    | |||| ||||||||||||    
T  89298 c-aacccttgttcttctct 89281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 107728 - 107635
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttct 244  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||    
T  107728 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaattcttgattcttcaagttct 107635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 42568 - 42708
Alignment:
Q  30 ttcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 129  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  130 attaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||| |||||||||| ||||| |||||||| ||||||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacctt 42708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 13824 - 13927
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| || |||  ||||| ||||| ||||||||||||    
T  13824 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttatcttctagattcaccccaattcttaattcttca 13923  T
Q  239 agtt 242  Q
    ||||    
T  13924 agtt 13927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 30292 - 30448
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  30292 acatcaaattaacatattcaaacatatctctacaacataagcatgaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcata 30391  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    |||||||||||||| ||||||| |||||||||| || || | |||||| ||||||||    
T  30392 gaacaagagaaaaataattaactaaatgattatgatgaaaaataacccccttacctt 30448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 353 - 413
Alignment:
Q  154 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||| || |||||||||||| ||||   ||||||||| ||||||||||    
T  353 actaacccccttaccttagaagaagattaatccaaactctcgcttcaattcagctcctaag 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 508 - 353
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  508 acatcaaattaacatattcaaatatatctctacaacataagcacaaatttcaaatattgggttcatgataatcacttattctcataatcaattatgcata 409  T
Q  114 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 170  Q
    ||||||||| |||||||||||| | |||||||| ||||||| ||||||  |||||||    
T  408 gaacaagag-aaaagaattaactagatgattatgataaagaataaccccgttacctt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 26372 - 26243
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaagctcactccaatccttaattcttca 26273  T
Q  239 agttcttctctctaacctttgttcttctct 268  Q
    ||||||||||||||||| || |||||||||    
T  26272 agttcttctctctaaccctttttcttctct 26243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 8125 - 7993
Alignment:
Q  139 atgattatcataaagactaacccac-ttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttc 237  Q
    |||||||| || ||||||||||| | ||||||| ||| | ||||||||| ||||||||||||| |||||||||||  |||||  |||| ||| |||||||    
T  8125 atgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctcctagattcacctcaattcttgattcttc 8026  T
Q  238 aagttcttc--tctctaacctttgttcttctct 268  Q
    |||||  ||  |||| |||| ||||||||||||    
T  8025 aagtttctccttctccaacccttgttcttctct 7993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 12063 - 12138
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| || ||||||||||| |||| ||| ||| | ||||||||| ||||| |||||||||||||||||||||    
T  12063 atgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaag 12138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 15238 - 15326
Alignment:
Q  180 ttaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15238 ttaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctctctaacctttgttcttctct 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 15147 - 15236
Alignment:
Q  14 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatca 103  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15147 acatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 914 - 839
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| |||||||   | ||||||| ||||||||||    
T  914 atgattatgataaagactaacccccttaccttagaagaagattaaccccaactcttgattcaattcagctcctaag 839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 51140 - 51008
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| ||||||||||| |  |||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  51140 atgattatgataaagactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 51041  T
Q  239 agtt---cttctctctaacctttgttcttctct 268  Q
    ||||   ||||||||||||| ||||||||||||    
T  51040 agttctccttctctctaacccttgttcttctct 51008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 146906 - 147040
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat-cttgattcttca 147004  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  147005 agctctccctcttctctctaacccttgttcttctct 147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 9160 - 9263
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||| |||||||||| ||| | |||||| | |||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 9259  T
Q  239 agtt 242  Q
    ||||    
T  9260 agtt 9263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 42034 - 42166
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||| ||||| |||||||| ||| || |||||||||||||||| |||||||||| |||||||| ||| ||||||||||| |||||||    
T  42034 atgattatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaatttacctcctaagctcagtccaatccttagttcttca 42133  T
Q  239 agtt---cttctctctaacctttgttcttctct 268  Q
    ||||   ||||||||||||| ||||||||||||    
T  42134 agttctccttctctctaacccttgttcttctct 42166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 9183 - 9317
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  9183 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 9281  T
Q  239 agttc------ttctctctaacctttgttcttctct 268  Q
    || ||      |||||||||||| ||||||||||||    
T  9282 agctctccctattctctctaacccttgttcttctct 9317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 123107 - 123011
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttct 247  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  123107 aagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttcaagttcttct 123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 172210 - 172344
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  172210 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 172308  T
Q  239 agttc------ttctctctaacctttgttcttctct 268  Q
    || ||      |||||||||||| ||||||||||||    
T  172309 agctctcccttttctctctaacccttgttcttctct 172344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 177913 - 178047
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  177913 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 178011  T
Q  239 agttc------ttctctctaacctttgttcttctct 268  Q
    || ||      |||||||||||| ||||||||||||    
T  178012 agctctcccttttctctctaacccttgttcttctct 178047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 44170 - 44039
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatag 114  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||  ||||||||||||||  ||||||| ||||||||||    
T  44170 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatag 44071  T
Q  115 aacaagagaaaaagaattaaccaaatgattat 146  Q
     | |||||| ||  ||||||| || |||||||    
T  44070 caaaagagagaagaaattaactaagtgattat 44039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 1430 - 1564
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 1528  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  1529 agctctccctcttctctctaacccttgttcttctct 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 3540 - 3440
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| | |||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  3540 atgattatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 3442  T
Q  239 ag 240  Q
    ||    
T  3441 ag 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 12418 - 12553
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| |||  |||||||||| ||||||||||||| ||||||||||||| ||||||||||  || ||||||||    
T  12418 atgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaagctcactccaatttttgattcttca 12517  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  12518 agctctccctcttctctctaacccttgttcttctct 12553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 247398 - 247292
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactc--caatccttaattctt 236  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||  ||| |||| ||||||    
T  247398 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctc-ctcctcaacccttgattctt 247300  T
Q  237 caagttct 244  Q
    ||||||||    
T  247299 caagttct 247292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 34107 - 34032
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| || ||||||||||| |||||||| |||||||||||| || ||||   ||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaag 34032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 272330 - 272464
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||| || |||||||||| ||| |||||| |    
T  272330 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctgagctcactccaat-cttgattcttta 272428  T
Q  239 ag------ttcttctctctaacctttgttcttctct 268  Q
    ||       |||||||||||||| ||||||||||||    
T  272429 agctctccctcttctctctaacccttgttcttctct 272464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 57427 - 57315
Alignment:
Q  136 caaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattct 235  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||| ||||| ||| ||||     
T  57427 caaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagctcac-ccaat-cttgattcc 57330  T
Q  236 tcaagttcttctctc 250  Q
    ||||| |||||||||    
T  57329 tcaagctcttctctc 57315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 339 - 468
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| || ||||||||||| |||||||| ||| | ||||||||| |||||||||||||||||||||||||||  ||| ||||| ||| |||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaagaccaccccaattcttgattcttcaa 438  T
Q  240 gttcttctc-tctaacctttgttcttctct 268  Q
    |||||  || ||||||| || |||||||||    
T  439 gttctcatcttctaaccctttttcttctct 468  T

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Target: scaffold0008 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 128127 - 128027
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||| |||||||  |||||||||| ||| ||||||||    
T  128127 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcattttatctcctaatctcactccaat-cttgattcttca 128029  T
Q  239 ag 240  Q
    ||    
T  128028 ag 128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 305 - 384
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  305 catcaaattaacatactcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 1557 - 1478
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 94  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||    
T  1557 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 36869 - 36732
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttca---atttagctcctaagttcactccaatccttaattct 235  Q
    |||||||| |||||||||||||| ||||||||  || |||||||||||||||||||||||||    ||||||||||||| |||||||||| ||| |||||    
T  36869 atgattatgataaagactaacccccttaccttaaataaagattaatcccaacttaggcttcacttctttagctcctaagctcactccaat-cttgattct 36771  T
Q  236 tcaag------ttcttctctctaacctttgttcttctct 268  Q
    |||||       |||||||||||||| ||||||||||||    
T  36770 tcaagctctccctcttctctctaacccttgttcttctct 36732  T

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Target: scaffold0158 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 25532 - 25640
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaa 239  Q
    ||||||| || ||||||||||| |||||||| ||| | |||||| || ||||||||||||||||||||||||||| |||| | ||| ||| |||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagctcac-ctaattcttgattcttcaa 25630  T
Q  240 gttcttctct 249  Q
    ||||| ||||    
T  25631 gttctcctct 25640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 22857 - 22932
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 22932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 27112 - 27187
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 27187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 1528 - 1453
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 56045 - 55936
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| || ||||||||||| || ||| | ||| | ||||||||| ||||||||||| |||||| ||||||||||||| |||||  || ||||||||    
T  56045 atgattatgatgaagactaaccccctgaccgtagataatgattaatccaaacttaggctttaatttatctcctaagttcaccccaat--ttgattcttca 55948  T
Q  239 agttcttctctc 250  Q
    || |||||||||    
T  55947 agctcttctctc 55936  T

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Target: scaffold0772 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 5846 - 5921
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 3897 - 3785
Alignment:
Q  15 catcaaattaacatattcaaacatatct----ctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgc 110  Q
    ||||||||||||||| |||||||||| |    ||||||||| |||||||||||||||  |||| ||||  ||||||||||||||  |||| || ||||||    
T  3897 catcaaattaacatactcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgc 3798  T
Q  111 atagaacaagaga 123  Q
    |||||| ||||||    
T  3797 atagaaaaagaga 3785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 34340 - 34266
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 45338 - 45413
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||| || ||||||||||| |||||||| ||| | | ||||||| |||||||||||||||| ||||||||||    
T  45338 atgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaag 45413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 18026 - 18100
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| |||||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaa 18100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 41965 - 42039
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  41965 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 6024 - 5947
Alignment:
Q  137 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    |||||||||| |||||||||||||| |||||||| |||  |||||||||| ||||   ||||||||| ||||||||||    
T  6024 aaatgattatgataaagactaacccccttaccttagatagagattaatcctaactcttgcttcaattcagctcctaag 5947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 48903 - 49002
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttca 238  Q
    |||||||| |||||||||||||| |||||||| | | | | | ||||  ||||||||||| | ||||||||||||| |||||||||| ||| ||||||||    
T  48903 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggctttactttagctcctaagctcactccaat-cttgattcttca 49001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 10276 - 10213
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaag 214  Q
    ||||| ||||| |||||||| ||||| |||||| |||||||||||||||| |||||||| ||||    
T  10276 aagacaaacccccttaccttagatgatgattaaccccaacttaggcttcactttagctcataag 10213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 5508 - 5434
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| | ||||||||||| ||||||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 5549 - 5623
Alignment:
Q  139 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||| ||||||| ||||||||||||    
T  5549 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 49772 - 49710
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  49772 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 49710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 2942 - 2875
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt--tcttctctctaacc 255  Q
    ||||||||||||||| |||||||  || || ||||||||| |||||||||||  ||||||||||||||    
T  2942 cttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcatcttctctctaacc 2875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 9282 - 9223
Alignment:
Q  154 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  9282 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 9223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 16180 - 16121
Alignment:
Q  154 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||    
T  16180 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 6082 - 6133
Alignment:
Q  15 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 66  Q
    |||||| |||||||| ||||||||||| ||||||||| ||||| ||||||||    
T  6082 catcaatttaacatactcaaacatatcactacaacatgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 3528 - 3578
Alignment:
Q  163 cttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    |||||||| ||||| ||||||| | ||||||||||||| ||||||||||||    
T  3528 cttaccttagatgatgattaattcaaacttaggcttcactttagctcctaa 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 34034 - 34102
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttc---ttctctctaacc 255  Q
    |||||||||||||||||||||||  ||  | ||||||||| |||||||||||||   ||||||||||||    
T  34034 cttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttccttttctctctaacc 34102  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 95310 - 95372
Alignment:
Q  151 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||||||| |||||||| | | | ||||||||| ||| ||||||||| ||||||||||||    
T  95310 aagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaa 95372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 12075 - 12002
Alignment:
Q  140 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 213  Q
    ||||||| ||||  |||||||| |||||||| ||||| | |||||   ||||||||||||| ||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaa 12002  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 11529 - 11465
Alignment:
Q  190 cttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagt--tcttctctcta 252  Q
    ||||||||||||||| |||||||  || || ||||||||| |||||||||||  |||||||||||    
T  11529 cttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcctcttctctcta 11465  T

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