View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6899_low_3 (Length: 608)

Name: NF6899_low_3
Description: NF6899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6899_low_3
NF6899_low_3
[»] chr5 (44 HSPs)
chr5 (3-564)||(4555287-4555846)
chr5 (80-337)||(9877627-9877883)
chr5 (80-337)||(39903705-39903961)
chr5 (80-337)||(39908818-39909074)
chr5 (80-337)||(9872512-9872768)
chr5 (81-306)||(2022853-2023079)
chr5 (80-306)||(13556393-13556619)
chr5 (90-297)||(35368989-35369196)
chr5 (102-306)||(25183988-25184186)
chr5 (419-519)||(4554664-4554763)
chr5 (142-306)||(43378327-43378491)
chr5 (412-462)||(9142047-9142097)
chr5 (419-467)||(26712381-26712429)
chr5 (419-467)||(26982119-26982167)
chr5 (90-161)||(43540857-43540928)
chr5 (341-411)||(32944462-32944532)
chr5 (19-77)||(35368895-35368953)
chr5 (17-77)||(13556296-13556356)
chr5 (18-77)||(9872417-9872476)
chr5 (18-77)||(9877532-9877591)
chr5 (18-77)||(39909110-39909169)
chr5 (17-77)||(2023106-2023166)
chr5 (340-407)||(32943516-32943583)
chr5 (18-77)||(39903997-39904056)
chr5 (413-491)||(6804802-6804880)
chr5 (419-492)||(4789527-4789600)
chr5 (412-452)||(473052-473092)
chr5 (410-478)||(2319264-2319332)
chr5 (411-467)||(6805950-6806006)
chr5 (419-459)||(16689600-16689640)
chr5 (412-459)||(1970515-1970562)
chr5 (419-458)||(6803955-6803994)
chr5 (340-407)||(16689592-16689659)
chr5 (341-390)||(3309489-3309538)
chr5 (342-391)||(4789521-4789570)
chr5 (341-410)||(6007633-6007702)
chr5 (418-459)||(17766569-17766610)
chr5 (342-407)||(26712370-26712435)
chr5 (342-407)||(26982108-26982173)
chr5 (425-458)||(42651581-42651614)
chr5 (341-389)||(4301905-4301953)
chr5 (419-459)||(26711575-26711615)
chr5 (419-459)||(26981312-26981352)
chr5 (412-464)||(32943517-32943569)
[»] chr3 (58 HSPs)
chr3 (80-337)||(31076490-31076746)
chr3 (80-337)||(31081595-31081851)
chr3 (9-337)||(20890921-20891247)
chr3 (80-337)||(6858143-6858399)
chr3 (80-337)||(4049667-4049923)
chr3 (80-337)||(10673026-10673282)
chr3 (80-337)||(10678141-10678397)
chr3 (80-306)||(1302333-1302559)
chr3 (80-337)||(8458171-8458427)
chr3 (80-337)||(8464610-8464866)
chr3 (80-337)||(10591383-10591639)
chr3 (82-337)||(5458102-5458356)
chr3 (82-337)||(5481578-5481832)
chr3 (80-337)||(4054801-4055057)
chr3 (80-337)||(6853040-6853296)
chr3 (80-337)||(33703160-33703415)
chr3 (80-337)||(33702688-33702944)
chr3 (18-295)||(18024173-18024450)
chr3 (53-305)||(3187514-3187766)
chr3 (81-306)||(49784383-49784611)
chr3 (90-306)||(29827319-29827530)
chr3 (80-196)||(10584946-10585062)
chr3 (412-519)||(38337419-38337525)
chr3 (412-521)||(38336944-38337050)
chr3 (198-337)||(10586388-10586526)
chr3 (18-77)||(4049960-4050019)
chr3 (18-77)||(10584851-10584910)
chr3 (19-77)||(49784638-49784696)
chr3 (18-77)||(1302237-1302296)
chr3 (18-77)||(4055094-4055153)
chr3 (18-77)||(5458004-5458063)
chr3 (18-77)||(5481481-5481540)
chr3 (18-77)||(6852945-6853004)
chr3 (18-77)||(6858048-6858107)
chr3 (18-77)||(8464902-8464961)
chr3 (18-77)||(10591288-10591347)
chr3 (18-77)||(10672931-10672990)
chr3 (18-77)||(33702592-33702651)
chr3 (23-77)||(33703452-33703506)
chr3 (18-71)||(8458470-8458523)
chr3 (18-77)||(31076395-31076454)
chr3 (18-77)||(31081500-31081559)
chr3 (419-459)||(45501295-45501335)
chr3 (407-459)||(51420856-51420908)
chr3 (409-489)||(52398999-52399079)
chr3 (42-77)||(10678070-10678105)
chr3 (14-77)||(29827556-29827618)
chr3 (419-458)||(33968188-33968227)
chr3 (412-459)||(43768026-43768073)
chr3 (419-466)||(49288669-49288716)
chr3 (412-517)||(44022031-44022135)
chr3 (340-390)||(44064188-44064238)
chr3 (425-506)||(15450239-15450318)
chr3 (410-459)||(19132813-19132862)
chr3 (417-458)||(20313433-20313474)
chr3 (412-452)||(42108370-42108410)
chr3 (419-459)||(45297556-45297596)
chr3 (419-459)||(49161809-49161849)
[»] chr1 (60 HSPs)
chr1 (80-337)||(3465333-3465589)
chr1 (80-337)||(28574157-28574413)
chr1 (80-337)||(28598169-28598425)
chr1 (90-337)||(1187688-1187933)
chr1 (80-249)||(3468014-3468183)
chr1 (3-196)||(17414546-17414740)
chr1 (81-337)||(10186668-10186920)
chr1 (17-337)||(16051066-16051397)
chr1 (81-306)||(43358641-43358868)
chr1 (81-337)||(13654195-13654452)
chr1 (80-304)||(44524110-44524331)
chr1 (81-306)||(19310715-19310939)
chr1 (412-564)||(14925240-14925390)
chr1 (428-564)||(11469097-11469234)
chr1 (410-516)||(31787476-31787581)
chr1 (154-306)||(29681479-29681632)
chr1 (90-239)||(35626129-35626278)
chr1 (411-519)||(11469707-11469814)
chr1 (419-519)||(31788218-31788317)
chr1 (426-519)||(14924688-14924780)
chr1 (154-306)||(48366213-48366366)
chr1 (193-340)||(17415386-17415532)
chr1 (90-185)||(21431770-21431865)
chr1 (90-294)||(3696404-3696605)
chr1 (412-521)||(11426853-11426961)
chr1 (410-521)||(7463413-7463523)
chr1 (18-77)||(28574449-28574508)
chr1 (18-77)||(28598461-28598520)
chr1 (23-77)||(3468220-3468274)
chr1 (412-521)||(7464010-7464118)
chr1 (16-77)||(21431673-21431734)
chr1 (3-75)||(3701476-3701548)
chr1 (232-340)||(35624874-35624981)
chr1 (409-507)||(4641716-4641813)
chr1 (412-459)||(36272548-36272595)
chr1 (419-458)||(46134619-46134658)
chr1 (412-459)||(47334901-47334948)
chr1 (412-461)||(294625-294674)
chr1 (17-90)||(10186573-10186646)
chr1 (411-484)||(11031430-11031503)
chr1 (412-521)||(11427447-11427555)
chr1 (341-410)||(37422395-37422464)
chr1 (411-459)||(6768119-6768167)
chr1 (412-508)||(37889879-37889974)
chr1 (14-77)||(19310965-19311028)
chr1 (412-459)||(29334214-29334261)
chr1 (412-459)||(38932129-38932176)
chr1 (412-459)||(43316357-43316404)
chr1 (419-474)||(49420091-49420146)
chr1 (23-77)||(43358895-43358949)
chr1 (425-459)||(45922245-45922279)
chr1 (341-410)||(42646017-42646086)
chr1 (40-77)||(44524048-44524085)
chr1 (419-448)||(49420967-49420996)
chr1 (412-484)||(11032195-11032267)
chr1 (14-70)||(13654468-13654524)
chr1 (419-459)||(30466189-30466229)
chr1 (419-459)||(36385675-36385715)
chr1 (411-459)||(37423077-37423125)
chr1 (419-459)||(42383727-42383767)
[»] chr8 (45 HSPs)
chr8 (80-337)||(14318703-14318959)
chr8 (80-337)||(26981964-26982220)
chr8 (80-337)||(26987077-26987333)
chr8 (80-337)||(14314999-14315255)
chr8 (82-337)||(34108089-34108343)
chr8 (90-306)||(18608726-18608942)
chr8 (80-340)||(43956937-43957196)
chr8 (81-306)||(10341046-10341271)
chr8 (81-337)||(25953248-25953503)
chr8 (80-211)||(18494264-18494395)
chr8 (124-337)||(18884924-18885136)
chr8 (412-519)||(12350596-12350702)
chr8 (412-521)||(43924490-43924598)
chr8 (411-516)||(43971277-43971381)
chr8 (412-519)||(12349967-12350073)
chr8 (434-521)||(39257656-39257742)
chr8 (412-519)||(43924960-43925066)
chr8 (419-519)||(43972028-43972127)
chr8 (18-77)||(14314904-14314963)
chr8 (18-77)||(14318608-14318667)
chr8 (18-77)||(18494169-18494228)
chr8 (18-77)||(26986982-26987041)
chr8 (412-475)||(32574793-32574856)
chr8 (18-77)||(34108383-34108442)
chr8 (446-521)||(38686337-38686411)
chr8 (23-77)||(43956848-43956902)
chr8 (18-77)||(26981868-26981927)
chr8 (442-521)||(33801529-33801607)
chr8 (442-521)||(38686995-38687073)
chr8 (340-407)||(40450968-40451035)
chr8 (341-390)||(35839722-35839771)
chr8 (419-459)||(35840531-35840571)
chr8 (419-455)||(35943083-35943119)
chr8 (419-459)||(40450987-40451027)
chr8 (412-459)||(13935054-13935101)
chr8 (442-521)||(33802313-33802391)
chr8 (412-459)||(42345394-42345441)
chr8 (96-158)||(1781877-1781939)
chr8 (340-382)||(6012968-6013010)
chr8 (530-564)||(12350546-12350580)
chr8 (340-382)||(35943075-35943117)
chr8 (410-459)||(7054088-7054137)
chr8 (341-390)||(35840529-35840578)
chr8 (17-61)||(25953167-25953211)
chr8 (419-447)||(38660083-38660111)
[»] chr7 (45 HSPs)
chr7 (80-337)||(12856649-12856905)
chr7 (80-337)||(26050881-26051137)
chr7 (80-337)||(26055994-26056250)
chr7 (80-337)||(26060240-26060496)
chr7 (80-337)||(26065353-26065609)
chr7 (80-306)||(12851564-12851790)
chr7 (80-337)||(14610224-14610480)
chr7 (101-337)||(11056485-11056720)
chr7 (19-306)||(37459857-37460155)
chr7 (18-340)||(4181396-4181728)
chr7 (123-306)||(35352422-35352605)
chr7 (154-306)||(5436692-5436845)
chr7 (411-494)||(46759228-46759311)
chr7 (419-520)||(46757431-46757531)
chr7 (412-519)||(27599211-27599317)
chr7 (92-196)||(5440388-5440492)
chr7 (92-196)||(5449398-5449502)
chr7 (411-519)||(27600037-27600144)
chr7 (18-77)||(12856941-12857000)
chr7 (419-466)||(35771253-35771300)
chr7 (412-454)||(9122650-9122692)
chr7 (341-407)||(32548655-32548721)
chr7 (340-389)||(5064645-5064694)
chr7 (17-90)||(5440292-5440365)
chr7 (17-90)||(5449302-5449375)
chr7 (18-77)||(12851828-12851887)
chr7 (18-77)||(26051173-26051232)
chr7 (18-77)||(26056286-26056345)
chr7 (18-77)||(26060532-26060591)
chr7 (18-77)||(26065645-26065704)
chr7 (271-337)||(14615290-14615355)
chr7 (419-516)||(12732254-12732350)
chr7 (419-455)||(6730162-6730198)
chr7 (338-382)||(6730164-6730208)
chr7 (419-459)||(24995859-24995899)
chr7 (419-459)||(24996684-24996724)
chr7 (410-478)||(45887277-45887345)
chr7 (40-91)||(35352336-35352387)
chr7 (412-478)||(45887962-45888028)
chr7 (341-390)||(14629819-14629868)
chr7 (336-389)||(24995847-24995900)
chr7 (410-459)||(46756268-46756317)
chr7 (419-459)||(14629826-14629866)
chr7 (419-459)||(29060740-29060780)
chr7 (419-459)||(42607088-42607128)
[»] chr6 (20 HSPs)
chr6 (80-337)||(21275633-21275889)
chr6 (81-303)||(20752207-20752429)
chr6 (14-306)||(24508849-24509142)
chr6 (81-306)||(24509593-24509818)
chr6 (90-306)||(11183264-11183480)
chr6 (86-293)||(2887392-2887600)
chr6 (81-306)||(21937460-21937684)
chr6 (93-306)||(21936781-21936994)
chr6 (86-293)||(2889114-2889322)
chr6 (412-519)||(27763413-27763519)
chr6 (18-77)||(21275925-21275984)
chr6 (14-77)||(21936675-21936738)
chr6 (17-77)||(24509852-24509912)
chr6 (412-459)||(24125972-24126019)
chr6 (412-459)||(24126719-24126766)
chr6 (412-450)||(8383191-8383229)
chr6 (341-402)||(29290123-29290184)
chr6 (411-456)||(4311192-4311237)
chr6 (419-455)||(16764932-16764968)
chr6 (410-458)||(25371167-25371215)
[»] chr4 (64 HSPs)
chr4 (80-337)||(35095888-35096144)
chr4 (81-306)||(30019939-30020165)
chr4 (80-337)||(35090775-35091031)
chr4 (81-337)||(32429372-32429628)
chr4 (16-337)||(54859169-54859500)
chr4 (90-340)||(34279589-34279838)
chr4 (122-340)||(3424830-3425047)
chr4 (90-304)||(47071300-47071514)
chr4 (19-297)||(34128254-34128542)
chr4 (90-337)||(18716346-18716595)
chr4 (90-306)||(18670732-18670946)
chr4 (178-306)||(3415338-3415466)
chr4 (90-306)||(18737049-18737268)
chr4 (412-519)||(6247412-6247519)
chr4 (412-564)||(6246784-6246937)
chr4 (426-519)||(10421523-10421615)
chr4 (90-202)||(14643828-14643940)
chr4 (426-521)||(15481049-15481143)
chr4 (207-303)||(14646483-14646579)
chr4 (419-481)||(232028-232090)
chr4 (429-519)||(15481512-15481601)
chr4 (338-407)||(33369906-33369975)
chr4 (411-519)||(45331395-45331502)
chr4 (460-564)||(10420965-10421067)
chr4 (340-407)||(33370857-33370924)
chr4 (18-77)||(35091067-35091126)
chr4 (18-77)||(35096180-35096239)
chr4 (442-521)||(50710357-50710435)
chr4 (411-462)||(55514352-55514403)
chr4 (412-516)||(30808621-30808724)
chr4 (22-77)||(22118857-22118912)
chr4 (412-459)||(23425208-23425255)
chr4 (412-459)||(25970804-25970851)
chr4 (412-519)||(30809447-30809553)
chr4 (14-77)||(32429282-32429345)
chr4 (442-521)||(53664242-53664320)
chr4 (341-407)||(232031-232097)
chr4 (107-168)||(34602060-34602121)
chr4 (476-521)||(50709723-50709767)
chr4 (419-459)||(231443-231483)
chr4 (14-90)||(3409597-3409673)
chr4 (419-459)||(25970113-25970153)
chr4 (419-459)||(54006735-54006775)
chr4 (14-77)||(3424699-3424762)
chr4 (412-459)||(36450728-36450775)
chr4 (412-459)||(47376852-47376899)
chr4 (412-459)||(47377599-47377646)
chr4 (419-517)||(6680286-6680383)
chr4 (341-410)||(17512185-17512254)
chr4 (19-77)||(34279507-34279565)
chr4 (411-469)||(45330564-45330622)
chr4 (425-459)||(47326790-47326824)
chr4 (425-459)||(47341586-47341620)
chr4 (340-382)||(54453094-54453136)
chr4 (17-90)||(18670969-18671042)
chr4 (40-77)||(25618315-25618352)
chr4 (341-390)||(25970106-25970155)
chr4 (419-467)||(23383317-23383365)
chr4 (413-461)||(25370507-25370555)
chr4 (17-77)||(30019839-30019899)
chr4 (410-454)||(32449315-32449359)
chr4 (419-459)||(41261129-41261169)
chr4 (477-521)||(53665026-53665069)
chr4 (419-459)||(54008455-54008495)
[»] chr2 (42 HSPs)
chr2 (80-306)||(17720614-17720840)
chr2 (80-306)||(45120276-45120502)
chr2 (82-306)||(14917472-14917696)
chr2 (80-337)||(30283529-30283785)
chr2 (81-337)||(42780043-42780298)
chr2 (90-337)||(16284296-16284544)
chr2 (412-516)||(4975696-4975799)
chr2 (102-233)||(716230-716361)
chr2 (412-516)||(4993604-4993707)
chr2 (419-521)||(4976445-4976546)
chr2 (419-521)||(4994352-4994453)
chr2 (419-521)||(41519865-41519966)
chr2 (412-519)||(37545676-37545782)
chr2 (419-521)||(42370890-42370991)
chr2 (19-77)||(20892343-20892401)
chr2 (419-521)||(42369650-42369751)
chr2 (20-77)||(14917377-14917434)
chr2 (18-77)||(17720519-17720578)
chr2 (340-407)||(36390956-36391023)
chr2 (412-467)||(36719015-36719070)
chr2 (14-77)||(42780325-42780388)
chr2 (18-77)||(45120539-45120598)
chr2 (419-459)||(36390964-36391004)
chr2 (241-337)||(39196121-39196216)
chr2 (442-521)||(8536826-8536904)
chr2 (14-77)||(30283439-30283502)
chr2 (412-491)||(41768712-41768791)
chr2 (419-459)||(24383063-24383104)
chr2 (412-469)||(37546555-37546612)
chr2 (412-460)||(5005462-5005510)
chr2 (340-388)||(23876064-23876112)
chr2 (419-459)||(36391673-36391713)
chr2 (412-459)||(7868142-7868189)
chr2 (446-521)||(8536171-8536245)
chr2 (419-458)||(15602822-15602861)
chr2 (355-410)||(30544741-30544796)
chr2 (436-466)||(4386202-4386232)
chr2 (419-459)||(2307074-2307114)
chr2 (419-459)||(23876064-23876104)
chr2 (419-459)||(30486942-30486982)
chr2 (419-483)||(34617660-34617724)
chr2 (412-452)||(44094825-44094865)
[»] scaffold0223 (3 HSPs)
scaffold0223 (82-306)||(2109-2333)
scaffold0223 (18-77)||(2012-2071)
scaffold0223 (271-337)||(7256-7321)
[»] scaffold0006 (2 HSPs)
scaffold0006 (81-337)||(143956-144213)
scaffold0006 (14-70)||(144229-144285)
[»] scaffold0189 (2 HSPs)
scaffold0189 (407-564)||(12757-12912)
scaffold0189 (412-516)||(12184-12287)
[»] scaffold0005 (2 HSPs)
scaffold0005 (90-202)||(173352-173464)
scaffold0005 (207-303)||(170711-170807)
[»] scaffold0391 (1 HSPs)
scaffold0391 (236-337)||(16467-16567)
[»] scaffold0150 (1 HSPs)
scaffold0150 (412-454)||(14012-14054)
[»] scaffold0129 (2 HSPs)
scaffold0129 (341-410)||(43197-43266)
scaffold0129 (419-459)||(43219-43259)
[»] scaffold0071 (1 HSPs)
scaffold0071 (425-506)||(11873-11952)


Alignment Details
Target: chr5 (Bit Score: 461; Significance: 0; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 3 - 564
Target Start/End: Complemental strand, 4555846 - 4555287
Alignment:
Q  3 aacctgtggctaaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacacaattttgttacat 102  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4555846 aacctttggctaaggggtgttttctctcatgttaatagtcatataatgcactataaatgcttgacatttgggcatcgatttggacacaattttgttacat 4555747  T
Q  103 taacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgtta 202  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4555746 taacaacataattcttcaccattctattactctaaatcatccattaattctctaatgcatgagtgaattattggtaccataaatctgtaaaataatgtta 4555647  T
Q  203 agaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttat 302  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4555646 agaaatatgtttggtgtgattttgcaatacacatcaatgaactcgtaatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttat 4555547  T
Q  303 tggtaagggacgaatcaaacttaaaagttagtgtgacaggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccat 402  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4555546 tggtaagggacgaatcaaacctaaaagttagtgtgacaggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccat 4555447  T
Q  403 tagattaagggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatc 502  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  4555446 tagattaagggtggcatttagtatgggaaagggaagttgtttcctaccatgggaaagctaattttgaacgttggataaagtggagaacata-cttttatc 4555348  T
Q  503 atagacactcaacaccaaacnnnnnnnccatattggcccaccacttgcagctgtcccaactc 564  Q
     ||||||||||||||| ||        ||||||||||||||| |||||||||||||||||||    
T  4555347 gtagacactcaacacc-aattttttttccatattggcccaccgcttgcagctgtcccaactc 4555287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 9877627 - 9877883
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  9877627 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 9877726  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  9877727 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 9877826  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  9877827 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 9877883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 39903961 - 39903705
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  39903961 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 39903862  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  39903861 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 39903762  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  39903761 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 39903705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 39909074 - 39908818
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  39909074 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 39908975  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  39908974 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 39908875  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  39908874 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 39908818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 9872512 - 9872768
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  9872512 atttggacagaattttgttacattaacaacataattcttcacaattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 9872611  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  9872612 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 9872711  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  9872712 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 9872768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 2023079 - 2022853
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||| |||    
T  2023079 tttggacagaattttgttacattaacaacataattcttcaccattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacc 2022980  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc- 279  Q
    |||||||||||||||| ||||| || ||||| ||||| || || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||     
T  2022979 ataaatctgtaaaatactgttaggagatacgcttggtttggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcct 2022880  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    ||||||||| |||||||||||||||||    
T  2022879 tattgcatcaaatatacagttattggt 2022853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 80 - 306
Target Start/End: Original strand, 13556393 - 13556619
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| || |||||||||||||||||| ||||||||  |||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  13556393 atttggacagaagtttgttacattaacaacataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 13556492  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||| |||||||||  |||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| | || || ||| || | |||||||    
T  13556493 cataaatatgtaaaatacggttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctaaaggggattcgtcgatcattcc 13556592  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||| ||||||||    
T  13556593 tattgcatccaatatacatttattggt 13556619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 297
Target Start/End: Original strand, 35368989 - 35369196
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||| ||| || |||| ||||||||  |||||| |||||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  35368989 aattttgttgcatcaaaaacataattcttcctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttgtaaccataaatctg 35369088  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| | ||| || ||||| |||||||| || ||||||||||||||| ||||||||| |||| |||  || ||| | ||||||||||||||||||||    
T  35369089 taaaatactattaggagatacgcttggtgtggttgtgcaatacacatcaaggaactcatagtatcctgagggggattcgctggtcattcctattgcatcc 35369188  T
Q  290 aatataca 297  Q
    ||||||||    
T  35369189 aatataca 35369196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 102 - 306
Target Start/End: Complemental strand, 25184186 - 25183988
Alignment:
Q  102 ttaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgtt 201  Q
    ||||||||| | |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||      | | | |||||||||||||| ||||    
T  25184186 ttaacaacatatttcttcaccattctcttactctaaatcatccatcaattctctaatgtattagtgaat------tgctagaaatctgtaaaatattgtt 25184093  T
Q  202 aagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagtta 301  Q
      || ||||| ||||| || || ||||||| || |||| ||||||||| |||| |||| || ||| |  ||| | |||||||||||||||||||||||||    
T  25184092 tggagatacgcttggtatggttgtgcaataaacgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagtta 25183993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 419 - 519
Target Start/End: Original strand, 4554664 - 4554763
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    |||||||||||||||| || |||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4554664 tttagtatgggaaaggaaaattgttttccaccatgagaaagctaattttgaccattagataaagtagagaacata-cttttatcatagacactcaacacc 4554762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 306
Target Start/End: Complemental strand, 43378491 - 43378327
Alignment:
Q  142 tccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatg 241  Q
    |||||||||||| |||||||||||||||||  ||| ||||||||||||||||||| ||||| || ||||| ||  ||||||| |||||||||| |||| |    
T  43378491 tccatcaattctttaatgcattagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttaatgtgattgtgcaatacacgtcaagg 43378392  T
Q  242 aactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggt 306  Q
    |||| |||||||| |||| || |||   | |||||||| |||||||| |||||||| ||||||||    
T  43378391 aactaataatatcctgaaggggattcacttgtcattccaattgcatcaaatatacaattattggt 43378327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 9142047 - 9142097
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagcta 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9142047 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagcta 9142097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 467
Target Start/End: Complemental strand, 26712429 - 26712381
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaatttt 467  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26712429 tttagcatgggaaagggaagttgtttcccaccatgggaaagctaatttt 26712381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 467
Target Start/End: Complemental strand, 26982167 - 26982119
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaatttt 467  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26982167 tttagcatgggaaagggaagttgtttcccaccatgggaaagctaatttt 26982119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 43540857 - 43540928
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgca 161  Q
    ||||||||||||||||||||| | |||| |  |||||| ||||||||||||||| |||||||||||||||||    
T  43540857 aattttgttacattaacaacatagttctccatcattctcttactctaaatcatctatcaattctctaatgca 43540928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 32944532 - 32944462
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaag 411  Q
    |||||||||||||||||||||||  | || ||||||| ||||  |||||||||||||||||||||||||||    
T  32944532 ggtggggtttagcatgggaaatgatacttgtttcccaccatggaaaagttaatgttagccattagattaag 32944462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 35368895 - 35368953
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  35368895 gtgttttctctcatgtgaaaagtcatataatgcactataaatgcttgacatttgggcat 35368953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 13556296 - 13556356
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  13556296 gggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 13556356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9872417 - 9872476
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  9872417 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 9872476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9877532 - 9877591
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  9877532 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 9877591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39909169 - 39909110
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  39909169 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 39909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 2023166 - 2023106
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||| |||||||| ||| || ||||||||||| ||||||||||||||||||| |||||||    
T  2023166 gggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatatgggcat 2023106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 32943516 - 32943583
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    ||||||| |||||||||||||| |  | || ||||||| |||| ||||||||||||||||||||||||    
T  32943516 aggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaatgttagccattagat 32943583  T

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Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39904056 - 39903997
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  39904056 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacattttggcat 39903997  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 491
Target Start/End: Complemental strand, 6804880 - 6804802
Alignment:
Q  413 gtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaaca 491  Q
    ||||||||||| |||||  || |||||||||||||||||||||||||  |||||||| |||| ||| | ||| ||||||    
T  6804880 gtggcatttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 6804802  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 4789527 - 4789600
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacat 492  Q
    ||||| ||||||||||| ||||||||||||||||||||||| || | |||| |||| ||| || | ||||||||    
T  4789527 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 4789600  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 473092 - 473052
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccat 452  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  473092 ggtggcatttaatatgggaaagggaagtcgtttcccaccat 473052  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 2319264 - 2319332
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggat 478  Q
    ||||||||||||| | |||||||||  |||| ||||||||||||||||||||  || ||| ||||||||    
T  2319264 agggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattggat 2319332  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 6806006 - 6805950
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaatttt 467  Q
    ||||| ||||||| |||||||||||||   |||||||||||||||||| ||||||||    
T  6806006 gggtgacatttagcatgggaaagggaaagagtttcccaccatgggaaaactaatttt 6805950  T

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Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 16689600 - 16689640
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  16689600 tttagtatgggaaagggaagttctttcccaccatggaaaag 16689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 1970562 - 1970515
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  1970562 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaag 1970515  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 6803955 - 6803994
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  6803955 tttagtatgggaaagggaagttgtttcctaccataggaaa 6803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 16689592 - 16689659
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||  ||||| ||| ||| | |||||||    
T  16689592 aggtggggtttagtatgggaaagggaagttctttcccaccatggaaaagtaaattttaactattagat 16689659  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 3309489 - 3309538
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    |||| |||||||||||||||| ||||||||||||| || ||| |||||||    
T  3309489 ggtgaggtttagcatgggaaagggaagttctttcctatgatgggaaagtt 3309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 4789521 - 4789570
Alignment:
Q  342 gtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtta 391  Q
    |||||||||||||||||||| || |||| ||||||| |||| ||||||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtta 4789570  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 6007702 - 6007633
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    |||||||||||| |||||||| |||| || |||||||| ||| ||||||| || || |||||| ||||||    
T  6007702 ggtggggtttagaatgggaaagggaatttgtttcccatgatgggaaagttgattttggccatttgattaa 6007633  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 17766569 - 17766610
Alignment:
Q  418 atttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
T  17766569 atttagtatgggaaaggatagttgtttcccaccatgagaaag 17766610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 26712435 - 26712370
Alignment:
Q  342 gtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||| ||||||||||||||| ||||||| ||||||| |||| ||||| |||| ||| |||| ||||    
T  26712435 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagat 26712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 26982173 - 26982108
Alignment:
Q  342 gtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||| ||||||||||||||| ||||||| ||||||| |||| ||||| |||| ||| |||| ||||    
T  26982173 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagat 26982108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 458
Target Start/End: Complemental strand, 42651614 - 42651581
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaa 458  Q
    |||||||||||||||||||||||||||| |||||    
T  42651614 atgggaaagggaagttgtttcccaccataggaaa 42651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 4301905 - 4301953
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagt 389  Q
    |||||||||||  |||| ||| |||||||||||||||||||| ||||||    
T  4301905 ggtggggtttaatatggaaaagggaagttctttcccatcatgggaaagt 4301953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 26711575 - 26711615
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  26711575 tttagtatgggaaaggaaagttgtttcccaacataggaaag 26711615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 26981312 - 26981352
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  26981312 tttagtatgggaaaggaaagttgtttcccaacataggaaag 26981352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 32943517 - 32943569
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaat 464  Q
    ||||| |||||| ||||||||||  | ||||||||||||||||||||| ||||    
T  32943517 ggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaat 32943569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 31076490 - 31076746
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  31076490 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 31076589  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || |||||||||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| || |||||||||    
T  31076590 cataaatctgtaaaatactgttaggagatacgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcc 31076689  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  31076690 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 31076746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 31081595 - 31081851
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||    
T  31081595 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaac 31081694  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || |||||||||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  31081695 cataaatctgtaaaatactgttaggagatacgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 31081794  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  31081795 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 31081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 337
Target Start/End: Complemental strand, 20891247 - 20890921
Alignment:
Q  9 tggctaaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacac-aattttgttacattaaca 107  Q
    |||| ||||||||||||||||| ||| ||  |||||||||| ||||||||||||||| |||||||| ||| ||||| |||| || |||||||||| ||||    
T  20891247 tggcaaaggggtgttttctctcatgtgaagggtcatataatgcactataaatgcttggcatttgggtatcaatttgaacacgaactttgttacataaaca 20891148  T
Q  108 acacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaa 207  Q
    ||| |||||| |  |||||  |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||||| |||||||| |    
T  20891147 acataattctccctcattcgcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaagaga 20891048  T
Q  208 tacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggta 307  Q
    |||| || |||||||| || |||||||||||| ||||||||| ||||| ||| || |||   | ||||||| |||||||||||||||||||||||||||     
T  20891047 tacgctttgtgtgattgtgtaatacacatcaaggaactcatagtatct-gaaggggattcactagtcattcatattgcatccaatatacagttattggt- 20890950  T
Q  308 agggacgaatcaaacttaaaagttagtgtg 337  Q
     ||  ||||||||||||||| |||||||||    
T  20890949 -ggcgcgaatcaaacttaaaggttagtgtg 20890921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 6858143 - 6858399
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  6858143 atttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 6858242  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| ||||||||| || |||||  |||||||||    
T  6858243 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcttgaaggggatttgccggtcattcc 6858342  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  6858343 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 6858399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 4049923 - 4049667
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  4049923 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 4049824  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  4049823 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 4049724  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  4049723 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 4049667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 10673026 - 10673282
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  10673026 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 10673125  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  10673126 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 10673225  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  10673226 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 10673282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 10678141 - 10678397
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  10678141 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 10678240  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  10678241 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 10678340  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  10678341 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 10678397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 80 - 306
Target Start/End: Original strand, 1302333 - 1302559
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  1302333 atttggacaaaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 1302432  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  1302433 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 1302532  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||| ||||||||    
T  1302533 tattgcatccaatatacatttattggt 1302559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 8458427 - 8458171
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  8458427 atttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 8458328  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  8458327 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 8458228  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  8458227 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 8458171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 8464866 - 8464610
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  8464866 atttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 8464767  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  8464766 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 8464667  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  8464666 tattgcatccaatatacatttattggt-tggggcgaatcgaacctaaaggttagtgtg 8464610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 10591383 - 10591639
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||| ||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  10591383 atttggacagaattttgttacattaacaacataattcctcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 10591482  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||||||||||||| |||| |||| || ||| |  |||||||||    
T  10591483 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaatgaactcatagtatcctgaaggggattcgccggtcattcc 10591582  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  10591583 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 10591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 82 - 337
Target Start/End: Original strand, 5458102 - 5458356
Alignment:
Q  82 ttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacca 181  Q
    ||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  5458102 ttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacca 5458201  T
Q  182 taaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattccta 281  Q
    ||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||||    
T  5458202 taaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccta 5458301  T
Q  282 ttgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  5458302 ttgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 5458356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 82 - 337
Target Start/End: Original strand, 5481578 - 5481832
Alignment:
Q  82 ttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacca 181  Q
    ||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  5481578 ttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacca 5481677  T
Q  182 taaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattccta 281  Q
    ||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||||    
T  5481678 taaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccta 5481777  T
Q  282 ttgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  5481778 ttgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 5481832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 4055057 - 4054801
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||| | ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||  ||| ||    
T  4055057 atttggatagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctttaatgcatgagtgaattgctggaac 4054958  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| | || ||||||||| |||| |||| || ||| || |||||||||    
T  4054957 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgttaaggaactcatagtatcctgaaggggattcgtcggtcattcc 4054858  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  4054857 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 4054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 6853040 - 6853296
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||  ||||||||  ||| ||    
T  6853040 atttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcacgagtgaattgctggaac 6853139  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  6853140 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 6853239  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  6853240 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 6853296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 33703415 - 33703160
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  33703415 atttggacataattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 33703316  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| | ||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  33703315 cataaatctgtaaaatactattaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaacgg-attcgccggtcattcc 33703217  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  33703216 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 33703160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 33702688 - 33702944
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  33702688 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 33702787  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||| ||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |   ||||||||    
T  33702788 cataaatatgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccagtcattcc 33702887  T
Q  280 tattgcatccaatatacagttattggtaaggga-cgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  |||| |||||| ||| |||| |||||||||    
T  33702888 tattgcatccaatatacatttattggt--gggagcgaatcgaacctaaaggttagtgtg 33702944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 18024173 - 18024450
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacac-aattttgttacattaacaacacaattc 116  Q
    ||||||||||||| ||| ||  |||||||||| ||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||| |||||    
T  18024173 ggtgttttctctcatgtgaagggtcatataatgcactataaatgcttgacatttggtcatcaatttggatactaattttgttacattaacaacataattc 18024272  T
Q  117 ttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttgg 216  Q
    | |  |||||| |||||||||||||| ||||||||||||||||||| | |||||| || | || |||||||||||||||| |||||| | ||||| ||||    
T  18024273 tccctcattctcttactctaaatcattcatcaattctctaatgcatgaatgaattgttagaacaataaatctgtaaaatattgttaacagatacgcttgg 18024372  T
Q  217 tgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatata 295  Q
    ||||||| |||||||||||| ||  |||||||| |||| |||| |  ||| | ||||||||||||||||||| ||||||    
T  18024373 tgtgattgtgcaatacacat-aaaaaactcatagtatcctgaaggatattcgctggtcattcctattgcatcaaatata 18024450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 53 - 305
Target Start/End: Original strand, 3187514 - 3187766
Alignment:
Q  53 ctataaatgcttgacatttgggcatcgatttggacac-aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaatt 151  Q
    ||||||||  ||||||||||| ||||  |||| |||| |||||||| |||||||||||| |||||| |  |||||| ||||||||||||||| |||||||    
T  3187514 ctataaatatttgacatttggacatcagtttgaacacgaattttgtgacattaacaacataattctccctcattctcttactctaaatcatctatcaatt 3187613  T
Q  152 ctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataat 251  Q
    || |||||||| ||||||||  | | ||||||||||||||||||| |||||||| ||||  || |||| ||| |||||||||||||||  |||||||  |    
T  3187614 ctttaatgcatgagtgaattgctcgaaccataaatctgtaaaatattgttaagagatacactttgtgtaattgtgcaatacacatcaagaaactcat-gt 3187712  T
Q  252 atcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattgg 305  Q
    ||| | || || ||| |   |||||||||||||||||||||||| |||||||||    
T  3187713 atccttaaggggattcgccagtcattcctattgcatccaatatatagttattgg 3187766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 49784611 - 49784383
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||| ||||||||||| |||||  |  |||||| ||||| ||||||||| |||||||||||||| ||| ||||||||  ||| |||    
T  49784611 tttggacagaattttgttgcattaacaacataattccccctcattcttttactttaaatcatctatcaattctctaattcatgagtgaattgctggaacc 49784512  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcata--atatcttgaaaggaatttgttggtcattc 278  Q
    ||||||||| |||||| ||||| || ||| ||||||| || || |||||||||| |||| |||||||||   ||||||||| || ||| |   |||||||    
T  49784511 ataaatctggaaaatattgttaggagatatgtttggtatggttgtgcaatacacgtcaaagaactcatagtgtatcttgaaggggattcgccagtcattc 49784412  T
Q  279 c-tattgcatccaatatacagttattggt 306  Q
    | |||||||||||||||||||||||||||    
T  49784411 cttattgcatccaatatacagttattggt 49784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 90 - 306
Target Start/End: Complemental strand, 29827530 - 29827319
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||| |||||| |||  |||||| |  |||||| |||||||||||||| ||||||||||||||||||| ||||||||  ||     |||||||||    
T  29827530 aattttgttgcattaataacctaattctccctcattctcttactctaaatcattcatcaattctctaatgcatgagtgaattgctg-----ataaatctg 29827436  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| ||||| || ||||  |||||||| || |||||||||| |||| ||||||||| ||||||||| || ||| |  ||||  |||||||||||||    
T  29827435 taaaatactgttaggagatacccttggtgtggttgtgcaatacacgtcaaggaactcatagtatcttgaaggggattcgccggtcgctcctattgcatcc 29827336  T
Q  290 aatatacagttattggt 306  Q
    |||||||| ||||||||    
T  29827335 aatatacaattattggt 29827319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 10584946 - 10585062
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||| ||  |||||||||| |||||||||||||||||||||||||||||| |||||||   | | ||    
T  10584946 atttggacagaattttgttacattaacaacataattcctcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaatagctagaac 10585045  T
Q  180 cataaatctgtaaaata 196  Q
    |||||||||||||||||    
T  10585046 cataaatctgtaaaata 10585062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 38337525 - 38337419
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| | || ||| || |||||||||||  ||||||||||||||||    
T  38337525 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacata-tttttatcatagacact 38337427  T
Q  512 caacacca 519  Q
    ||||||||    
T  38337426 caacacca 38337419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 38336944 - 38337050
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| | || ||| || |||||||||||  |||||||  |||||||    
T  38336944 ggtggcatttaatttggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacata-tttttatc--agacact 38337040  T
Q  512 caacaccaaa 521  Q
    ||||||||||    
T  38337041 caacaccaaa 38337050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 198 - 337
Target Start/End: Original strand, 10586388 - 10586526
Alignment:
Q  198 tgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatataca 297  Q
    ||||| || ||||| |||| ||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||||||||||||||||||||    
T  10586388 tgttaggagatacgcttggcgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatataca 10586487  T
Q  298 gttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
     ||||||||  ||| |||||| ||| |||| |||||||||    
T  10586488 tttattggt-gggggcgaatcgaacctaaaggttagtgtg 10586526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 4050019 - 4049960
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  4050019 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 4049960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 10584851 - 10584910
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10584851 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 10584910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 49784696 - 49784638
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  49784696 gtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 49784638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 1302237 - 1302296
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  1302237 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 1302296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 4055153 - 4055094
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  4055153 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 4055094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 5458004 - 5458063
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  5458004 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 5458063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 5481481 - 5481540
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  5481481 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 5481540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 6852945 - 6853004
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  6852945 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 6853004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 6858048 - 6858107
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  6858048 ggtgatttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 6858107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8464961 - 8464902
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  8464961 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 8464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 10591288 - 10591347
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10591288 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 10591347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 10672931 - 10672990
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10672931 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 10672990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 33702592 - 33702651
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  33702592 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 33702651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 33703506 - 33703452
Alignment:
Q  23 tttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  33703506 tttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 33703452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 8458523 - 8458470
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacattt 71  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||    
T  8458523 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacattt 8458470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 31076395 - 31076454
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| || ||||||||||||||||||||||||    
T  31076395 ggtgctttctctcatgtgaagagtcatataatgcattataaatgcttgacatttgggcat 31076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 31081500 - 31081559
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| || ||||||||||||||||||||||||    
T  31081500 ggtgctttctctcatgtgaagagtcatataatgcattataaatgcttgacatttgggcat 31081559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 45501335 - 45501295
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  45501335 tttagtatgggaaaggggagttgttttccaccatgggaaag 45501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 459
Target Start/End: Original strand, 51420856 - 51420908
Alignment:
Q  407 ttaagggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||| |||||||||||| |||||||| ||||||||||| ||||||| ||||||    
T  51420856 ttaacggtggcatttagcatgggaaaaggaagttgttttccaccataggaaag 51420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 52399079 - 52398999
Alignment:
Q  409 aagggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaa 489  Q
    ||||||||||||||| |||| ||||||||   |||||||| ||||||||||  |||||||| |||| ||| || |||||||    
T  52399079 aagggtggcatttagcatggaaaagggaaagagtttcccatcatgggaaagtaaattttgaccattagattaaatagagaa 52398999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 10678070 - 10678105
Alignment:
Q  42 catataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| |||||||||||||||||||||||||||    
T  10678070 catataatgcactataaatgcttgacatttgggcat 10678105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 29827618 - 29827556
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||||| || ||| || ||||||||||| || |||||||||||| |||||||||||    
T  29827618 aaggggtgttttctatcatgtgaa-agtcatataatgcattataaatgcttggcatttgggcat 29827556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 33968188 - 33968227
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  33968188 tttagcatgggaaagggaacttgtttcccaccatgggaaa 33968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 43768026 - 43768073
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  43768026 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaag 43768073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 466
Target Start/End: Complemental strand, 49288716 - 49288669
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattt 466  Q
    |||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  49288716 tttagtatgggaaagcaaagttgtctcccaccatgagaaagctaattt 49288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 517
Target Start/End: Complemental strand, 44022135 - 44022031
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattgga-taaagtagagaacataccttttatcatagacac 510  Q
    |||||||||||| |||| |||||  |||||||| |||||||||||||   || ||||| |||| || |||| ||| ||||||| ||||||||||| ||||    
T  44022135 ggtggcatttagcatggaaaaggagagttgttttccaccatgggaaaaaaaaatttgaccattagattaaactag-gaacata-cttttatcatacacac 44022038  T
Q  511 tcaacac 517  Q
    |||||||    
T  44022037 tcaacac 44022031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 390
Target Start/End: Original strand, 44064188 - 44064238
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    ||||||||| ||| |||| ||| |||||||||||||||||||| |||||||    
T  44064188 aggtggggtatagtatggaaaagggaagttctttcccatcatgggaaagtt 44064238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 15450239 - 15450318
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatag 506  Q
    |||||||||||||   |||||| |||||||||||| |||| |||| |||| ||| ||||||||||||||  |||||||||||    
T  15450239 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacata-tttttatcatag 15450318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 19132862 - 19132813
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||| |||||| | ||||||||| ||||| ||||||||||||||||||    
T  19132862 agggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaag 19132813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 458
Target Start/End: Complemental strand, 20313474 - 20313433
Alignment:
Q  417 catttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    |||||||||||||||||||||||  ||||||| |||||||||    
T  20313474 catttagtatgggaaagggaagtattttcccatcatgggaaa 20313433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 452
Target Start/End: Original strand, 42108370 - 42108410
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccat 452  Q
    |||||| |||| | |||||||||||||||||||||||||||    
T  42108370 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 45297556 - 45297596
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||||  |||||||||||| ||||||||||    
T  45297556 tttagtatgggaaaggagagttgtttcccatcatgggaaag 45297596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 49161849 - 49161809
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| | |||||||||||||||||||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaag 49161809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 8e-72; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 3465589 - 3465333
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  3465589 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 3465490  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  3465489 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 3465390  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  |||||||||| ||| |||| |||||||||    
T  3465389 tattgcatccaatatacatttattggt-ggggacgaatcgaacctaaaggttagtgtg 3465333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 28574413 - 28574157
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  28574413 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 28574314  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  28574313 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 28574214  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  28574213 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 28574157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 28598425 - 28598169
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  28598425 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 28598326  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  28598325 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 28598226  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  28598225 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 28598169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 90 - 337
Target Start/End: Complemental strand, 1187933 - 1187688
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||||||||||| || ||| ||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||  | | ||||||||||||    
T  1187933 aattttgttacattaacaacataaatctcctc-attctcttactctaaatcatccatcaattctttaatgcatgagtgaattggtagaaccataaatctg 1187835  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| ||||| || ||||| |||||||| || ||||||||||||||| ||||||||| |||| |||| |  ||| | ||||| ||||||||||||||    
T  1187834 taaaatattgttaggagatacgcttggtgtggttgtgcaatacacatcaaggaactcatagtatcatgaaggagattcgctggtctttcctattgcatcc 1187735  T
Q  290 aatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||||    
T  1187734 aatatacagttattggt-gggggcgaatcaaacctaaaggttagtgtg 1187688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 3468183 - 3468014
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  3468183 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 3468084  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcata 249  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| |||||||||    
T  3468083 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcata 3468014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 17414546 - 17414740
Alignment:
Q  3 aacctgtggctaaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacac-aattttgttaca 101  Q
    ||||| |||| || ||||| |||||||| ||| ||| |||||||||| ||||||||||||||| |||||||||||| |||||||||  ||||||||||||    
T  17414546 aacctttggcaaatgggtggtttctctcatgtgaatggtcatataatgcactataaatgcttggcatttgggcatcaatttggacatgaattttgttaca 17414645  T
Q  102 ttaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaata 196  Q
    ||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||| ||||||    
T  17414646 ttaacaacataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctggaaaata 17414740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 81 - 337
Target Start/End: Original strand, 10186668 - 10186920
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||||||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| |||    
T  10186668 tttggacagaattttgttacattaacaacataattctccatcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaacc 10186767  T
Q  181 ataaatctgtaaaataa----tgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcat 276  Q
    |||||||||||||||||    ||||| || |||||||||||||| || |||||||||| |||| ||||||||| ||||       | |||   |||||||    
T  10186768 ataaatctgtaaaataaatattgttaggagatacgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatc-------ggattcactggtcat 10186860  T
Q  277 tcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    | ||||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  10186861 ttctattgcatccaatatacaattattggt-gggggcgaatcgaacctaaaggttagtgtg 10186920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 337
Target Start/End: Complemental strand, 16051397 - 16051066
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacacaa------------ttttgttacatta 104  Q
    |||||||||| ||| ||| ||| |||||||||| ||||||||||| |||||||||||||||  ||||||||||||            |||||||||||||    
T  16051397 gggtgttttcactcatgtgaatggtcatataatgcactataaatgtttgacatttgggcattaatttggacacaacaagaacaagaattttgttacatta 16051298  T
Q  105 acaacacaatt-cttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaa 203  Q
    ||  | || || |||   |||| | ||||| |||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||||||||| |||||     
T  16051297 acc-ctcattttcttactcattttcttactttaaatcatccatcaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttag 16051199  T
Q  204 gaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttatt 303  Q
    |||||||| ||||||||  | ||||||||||||||| ||||||||| ||||||||| || ||| | | ||||||| | ||||||| ||||||||||||||    
T  16051198 gaaatacgcttggtgtggctgtgcaatacacatcaaggaactcatagtatcttgaagggtattcgctagtcattcattttgcatcaaatatacagttatt 16051099  T
Q  304 ggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||  ||| |||||| ||| |||| |||||||||    
T  16051098 ggt-gggggcgaatcgaacctaaaggttagtgtg 16051066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 43358868 - 43358641
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||  ||||||||||||||||||||| |||||| |  |||||| ||||||||||| |||||||||||||||||||||| ||||||||  ||| |||    
T  43358868 tttggactgaattttgttacattaacaacataattctccctcattctcttactctaaattatccatcaattctctaatgcatgagtgaattgctggaacc 43358769  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactc--ataatatcttgaaaggaatttgttggtcattc 278  Q
    |||||||||||||| | ||||| || ||| |||||||||| || |||||||||| |||| ||||||  ||| |||  |||| || ||| |  ||||| ||    
T  43358768 ataaatctgtaaaaaattgttaggagatatgtttggtgtggttgtgcaatacacgtcaaggaactcatatagtattctgaaggggattcgccggtcactc 43358669  T
Q  279 ctattgcatccaatatacagttattggt 306  Q
    ||||||||||||||||||||||||||||    
T  43358668 ctattgcatccaatatacagttattggt 43358641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 81 - 337
Target Start/End: Complemental strand, 13654452 - 13654195
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactct--aaatcatccatcaattctctaatgcattagtgaattattggta 178  Q
    |||||| | ||||||||| ||||||||||| |||||| |  |||||| || ||||  ||||||||||| ||||||||||||||| ||||||||  ||  |    
T  13654452 tttggatagaattttgttgcattaacaacataattctccctcattctcttgctctctaaatcatccattaattctctaatgcatgagtgaattgctgaaa 13654353  T
Q  179 ccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattc 278  Q
    |||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||| | ||    
T  13654352 ccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtaactc 13654253  T
Q  279 ctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||||||||||||||||||||||  ||| |||||| ||| |||| |||||||||    
T  13654252 ctattgcatccaatatacagttattggt-gggggcgaatcgaacctaaaggttagtgtg 13654195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 80 - 304
Target Start/End: Original strand, 44524110 - 44524331
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||| ||| ||| ||||| ||||||||||| |||||| |  |||||| ||||| |||||||||||||||||||||||||||| ||||||||  ||| ||    
T  44524110 atttgaacagaatattgttgcattaacaacataattctccatcattctcttactttaaatcatccatcaattctctaatgcatgagtgaattgctggaac 44524209  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |   |||| || ||||||||||||||| ||||||||| |||   ||| || ||| || | |||||||    
T  44524210 cataaatctgtaaaatactgttaggagatacgct---tgtggttgtgcaatacacatcaaggaactcatagtattccgaaggggattcgtcgatcattcc 44524306  T
Q  280 tattgcatccaatatacagttattg 304  Q
    |||||||||||||||||||||||||    
T  44524307 tattgcatccaatatacagttattg 44524331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 19310939 - 19310715
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| | ||||||||||||||||| | |||||| |  |||||| ||||| |||||||||||||||||||||||||||| | ||||||  ||| |||    
T  19310939 tttggacagagttttgttacattaacaatataattctccctcattctcttactataaatcatccatcaattctctaatgcatgaatgaattgctggaacc 19310840  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||||||||||| | | ||| || ||| | |||||| | || |||||||||| |||| |||||||||||||  | || || ||| | |||||||||||    
T  19310839 ataaatctgtaaaacactattaggagatatgcttggtgcggttgtgcaatacacgtcaaggaactcataatatact-aaggggattcgctggtcattcct 19310741  T
Q  281 attgcatccaatatacagttattggt 306  Q
    ||||||||||||||| ||||||||||    
T  19310740 attgcatccaatatagagttattggt 19310715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 14925390 - 14925240
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||| |||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||||||||||    
T  14925390 ggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaagctaattttgaccattagataaactagagaacata-cttttatcatagacact 14925292  T
Q  512 caacaccaaacnnnnnnnccatattggcccaccacttgcagctgtcccaactc 564  Q
    |||||||| |        |||||||||||||||||||||||||| ||||||||    
T  14925291 caacaccaga-tttttttccatattggcccaccacttgcagctgccccaactc 14925240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 428 - 564
Target Start/End: Original strand, 11469097 - 11469234
Alignment:
Q  428 ggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa--cnnn 525  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||||| |          
T  11469097 ggaaagggaagttgtttcccaccatgggaaagctaattttgaccattagataaggtagagaacata-cttttatcatagacactcaacaccagatttttt 11469195  T
Q  526 nnnnccatattggcccaccacttgcagctgtcccaactc 564  Q
         ||||||||||||||||||||||||||||||||||    
T  11469196 tttttcatattggcccaccacttgcagctgtcccaactc 11469234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 410 - 516
Target Start/End: Original strand, 31787476 - 31787581
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagaca 509  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||| |    
T  31787476 agggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattagataaagtagagaacata-cttttatcatagaga 31787574  T
Q  510 ctcaaca 516  Q
    |||||||    
T  31787575 ctcaaca 31787581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 154 - 306
Target Start/End: Complemental strand, 29681632 - 29681479
Alignment:
Q  154 ctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatat 253  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| || |||||| |||    
T  29681632 ctaatgcattagtgaattgctggaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 29681533  T
Q  254 cttgaaaggaatttgttggtcattcc-tattgcatccaatatacagttattggt 306  Q
    | | ||||| |||||  ||||||||| |||||||||||||||||||||||||||    
T  29681532 cctcaaagggatttgccggtcattccttattgcatccaatatacagttattggt 29681479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 35626278 - 35626129
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||     
T  35626278 aattttgttacattaacaacataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatcta 35626179  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaa 239  Q
    ||||||| | ||| || ||||||| | |||| || ||||  |||||||||    
T  35626178 taaaatactattaggagatacgttcgatgtggttgtgcatcacacatcaa 35626129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 411 - 519
Target Start/End: Complemental strand, 11469814 - 11469707
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacac 510  Q
    ||||| |||||| | |||||||||||||||||||  |||||||| ||| |||||||||| |||| |||||||||||||||||| |||||||||||||||     
T  11469814 gggtgacatttaatttgggaaagggaagttgtttttcaccatggaaaaactaattttgaccattagataaagtagagaacata-cttttatcatagacat 11469716  T
Q  511 tcaacacca 519  Q
    |||||||||    
T  11469715 tcaacacca 11469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 419 - 519
Target Start/End: Complemental strand, 31788317 - 31788218
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||||| |||||| |||||||||||||||||    
T  31788317 tttagtatgggaatgagaagttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacata-cttttaccatagacactcaacacc 31788219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 519
Target Start/End: Original strand, 14924688 - 14924780
Alignment:
Q  426 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacca 519  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||  || || |||||||||||  ||||||||||||||||||||||||    
T  14924688 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacata-tttttatcatagacactcaacacca 14924780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 48366213 - 48366366
Alignment:
Q  154 ctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatat 253  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| ||||  || ||||| |||||||| || |||||||||| |||| || |||||| |||    
T  48366213 ctaatgcattagtgaattgctggaaccataaatctgtaaaatattgtttggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 48366312  T
Q  254 cttgaaaggaatttgttggtcattcc-tattgcatccaatatacagttattggt 306  Q
    | | || || ||| |  ||||||||| |||||||||||||||||| ||||||||    
T  48366313 cctcaaggggattcgccggtcattccttattgcatccaatatacaattattggt 48366366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 193 - 340
Target Start/End: Original strand, 17415386 - 17415532
Alignment:
Q  193 aataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaat 292  Q
    |||| |||||||| ||| | ||||||||||| |||||||||||||||  |||| ||| |||| ||||  | ||||| |||||||||||||| ||||||||    
T  17415386 aatattgttaagagatatgattggtgtgattatgcaatacacatcaagaaactaatagtatcctgaagaggatttgatggtcattcctatttcatccaat 17415485  T
Q  293 atacagttattggtaagggacgaatcaaacttaaaagttagtgtgaca 340  Q
    ||||| ||||||||  ||| | |||| ||| |||| ||||||||||||    
T  17415486 atacaattattggt-gggggcaaatcgaacctaaatgttagtgtgaca 17415532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 21431770 - 21431865
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaa 185  Q
    ||||||||| ||||||||||| |||||| |  |||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||||||    
T  21431770 aattttgttgcattaacaacataattctccctcattctcttaatctaaatcatccatcaattctctaatgcatcagtgaattgatggaaccataaa 21431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 90 - 294
Target Start/End: Original strand, 3696404 - 3696605
Alignment:
Q  90 aattttgttacattaacaacacaattcttctcca-ttctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatct 188  Q
    ||||||||||||||||||||||||||||  |||| ||||  | || |||||||||||||||||||||   | || | ||||||  ||| ||||| ||| |    
T  3696404 aattttgttacattaacaacacaattctcttccatttctcattctataaatcatccatcaattctctgcagaatgaatgaattgatggaaccat-aattt 3696502  T
Q  189 gtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatc 288  Q
    ||||||||  ||||||| |||| |||| ||||||| ||  | ||||||||| ||| ||||| ||||||||| |  |||| ||| ||||| ||||||||||    
T  3696503 gtaaaatacggttaagagatacttttgctgtgattgtg--aaacacatcaaggaattcatagtatcttgaaggagatttattgatcatt-ctattgcatc 3696599  T
Q  289 caatat 294  Q
    ||||||    
T  3696600 caatat 3696605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 11426853 - 11426961
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||| |||| ||||||||   ||||||||||||||||||||||||||||| |||| ||| || || |||||| |  |||||||||||||  |    
T  11426853 ggtggcatttagcatggaaaagggaaagagtttcccaccatgggaaagctaattttgaccattagattaactaaagaacaca-gttttatcatagaccat 11426951  T
Q  512 caacaccaaa 521  Q
    ||||||||||    
T  11426952 caacaccaaa 11426961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 521
Target Start/End: Original strand, 7463413 - 7463523
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagaca 509  Q
    |||||||||||||| |||| ||||| ||   ||||||||||||||||||||||||||||| |||| ||| || || |||||| |  |||||||||||||     
T  7463413 agggtggcatttagcatggaaaaggaaaagagtttcccaccatgggaaagctaattttgaccattagattaaataaagaacaca-gttttatcatagacc 7463511  T
Q  510 ctcaacaccaaa 521  Q
     |||||||||||    
T  7463512 atcaacaccaaa 7463523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 28574508 - 28574449
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  28574508 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 28574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 28598520 - 28598461
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  28598520 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 28598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 3468274 - 3468220
Alignment:
Q  23 tttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  3468274 tttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 3468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 521
Target Start/End: Complemental strand, 7464118 - 7464010
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||  |||| ||||||||   |||||||||||||||||| |||||||||| |||  ||| || ||||||||| | | ||||||||||||  |    
T  7464118 ggtggcatttaacatggaaaagggaaagagtttcccaccatgggaaaactaattttgaccatcagattaactagagaacacaac-tttatcatagaccat 7464020  T
Q  512 caacaccaaa 521  Q
    ||||||||||    
T  7464019 caacaccaaa 7464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 21431673 - 21431734
Alignment:
Q  16 ggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||| |||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||    
T  21431673 ggggtgctttctctcatgtgaagggtcatataatgcactataaatgcttgacatttgggcat 21431734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 3701476 - 3701548
Alignment:
Q  3 aacctgtggctaaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggc 75  Q
    ||||| |||| || |||||||||||||| ||| || ||||| ||||| |||||||||| ||||||||||||||    
T  3701476 aacctttggcaaaagggtgttttctctcatgtgaagagtcacataatgcactataaatacttgacatttgggc 3701548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 340
Target Start/End: Complemental strand, 35624981 - 35624874
Alignment:
Q  232 cacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagtt 331  Q
    |||||||| ||||||||| |||| |||| || ||| |  ||||| |||||||||||||||||||||||| |||||  ||| |||||| ||| |||| |||    
T  35624981 cacatcaaggaactcatagtatcctgaaggggattcgccggtcactcctattgcatccaatatacagttgttggt-gggggcgaatcgaacctaaaggtt 35624883  T
Q  332 agtgtgaca 340  Q
    ||| |||||    
T  35624882 agtatgaca 35624874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 4641813 - 4641716
Alignment:
Q  409 aagggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaa-cattggataaagtagagaacataccttttatcataga 507  Q
    ||||||||  ||||| ||||||||||| | ||||||||||||| ||||||| ||||||| || |||||||| || |||||||||||  ||||||||||||    
T  4641813 aagggtggagtttagcatgggaaaggggaattgtttcccaccaagggaaag-taattttcaaccattggatcaaatagagaacata-gttttatcataga 4641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 36272595 - 36272548
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  36272595 ggtggcatttagcatgggaatgggaacttgtttcccaccatgggaaag 36272548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 419 - 458
Target Start/End: Complemental strand, 46134658 - 46134619
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  46134658 tttagtatgggaaagggaagttgtttcccatcatgggaaa 46134619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 47334948 - 47334901
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaag 47334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 294625 - 294674
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagct 461  Q
    |||||| ||||||||||||| ||| |||| ||||||||||||||||||||    
T  294625 ggtggcgtttagtatgggaatggggagttttttcccaccatgggaaagct 294674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 10186573 - 10186646
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca 90  Q
    ||||| |||||||| ||| ||  |||||||||| ||||||||||| |||||||||||||||  ||||| |||||    
T  10186573 gggtgctttctctcatgtgaagggtcatataatgcactataaatgtttgacatttgggcattaatttgaacaca 10186646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 11031430 - 11031503
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagta 484  Q
    ||||||||||||  ||||||||||| | | ||||||||||||||||||| ||| ||||| |||| ||| |||||    
T  11031430 gggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttaaatttgaccattagattaagta 11031503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 521
Target Start/End: Complemental strand, 11427555 - 11427447
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||| |||| ||||||||   |||| | ||||||||||| |||||||||| |||  ||| || ||||||||| | | ||||||||||||  |    
T  11427555 ggtggcatttagcatggaaaagggaaagagttttctaccatgggaaaactaattttgaccatcagattaactagagaacacaac-tttatcatagaccat 11427457  T
Q  512 caacaccaaa 521  Q
    ||||||||||    
T  11427456 caacaccaaa 11427447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 37422395 - 37422464
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    ||||||||||| ||||| ||| |||||||||||||||||||| |||||| ||| ||   |||||||||||    
T  37422395 ggtggggtttatcatggaaaaaggaagttctttcccatcatgggaaagtaaatatttatcattagattaa 37422464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 459
Target Start/End: Complemental strand, 6768167 - 6768119
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||| ||||||| ||||| || ||||||||||||||||||    
T  6768167 gggtggcatttagcatgggaatgggaacttatttcccaccatgggaaag 6768119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 508
Target Start/End: Original strand, 37889879 - 37889974
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagac 508  Q
    |||||||||||| |||  ||||||||   |||||||||||||||||||| |||||||| |||| ||| || || |||||| |  |||||||||||||    
T  37889879 ggtggcatttagcatgaaaaagggaaagagtttcccaccatgggaaagcgaattttgaccattagattaactaaagaacaca-gttttatcatagac 37889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 19311028 - 19310965
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| |||||||| ||| ||  ||||| |||| ||||||||||| |||||||||||||||    
T  19311028 aaggggtgctttctctcatgtgaagggtcatgtaatgcactataaatgtttgacatttgggcat 19310965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 29334214 - 29334261
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  29334214 ggtggcatttagcatgggaatggatagttgtttcccaccatgggaaag 29334261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 38932176 - 38932129
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| |||||||| ||||||||||| ||||||| ||||||    
T  38932176 ggtggcatttagcatgggaaaaggaagttgttttccaccataggaaag 38932129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 43316357 - 43316404
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  43316357 ggtggcatttagcatgggaatggatagttgtttcccaccatgggaaag 43316404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 49420091 - 49420146
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacatt 474  Q
    |||||||||||||||| |||||||||||||  |||||||||||  |||||| ||||    
T  49420091 tttagtatgggaaaggaaagttgtttcccatgatgggaaagctttttttgaccatt 49420146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 43358949 - 43358895
Alignment:
Q  23 tttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| ||| || |||| |||||| ||||||||||||||| |||||||||||    
T  43358949 tttctctcatgtgaagagtcctataatgcactataaatgcttggcatttgggcat 43358895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 45922245 - 45922279
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||||||||||||||||||    
T  45922245 atgggaaagggaggttgtttcccaccatgggaaag 45922279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 42646086 - 42646017
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    |||||||||||| |||||||| ||||||  ||| |||| ||| ||||||| || ||||||||| ||||||    
T  42646086 ggtggggtttagtatgggaaagggaagtagttttccataatgggaaagttgatcttagccatttgattaa 42646017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 44524048 - 44524085
Alignment:
Q  40 gtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  44524048 gtcatataatgcactataaatgtttgacatttgggcat 44524085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 448
Target Start/End: Complemental strand, 49420996 - 49420967
Alignment:
Q  419 tttagtatgggaaagggaagttgtttccca 448  Q
    ||||||||||||||||||||||||||||||    
T  49420996 tttagtatgggaaagggaagttgtttccca 49420967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 11032267 - 11032195
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagta 484  Q
    |||||||||||  ||||||||||| | | ||||||||||||||||||| | | ||||| |||| ||| |||||    
T  11032267 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagta 11032195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 13654524 - 13654468
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatt 70  Q
    ||||||||||||||||| ||| ||  |||||||||| |||||||||| |||| ||||    
T  13654524 aaggggtgttttctctcatgtgaagggtcatataatgcactataaatacttggcatt 13654468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 30466189 - 30466229
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  30466189 tttagcatgggaatggggagttgtttcccaccatgggaaag 30466229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 36385675 - 36385715
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||| ||||||||||||||| ||| ||||||||||    
T  36385675 tttagtatggaaaagggaagttgttttccatcatgggaaag 36385715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 459
Target Start/End: Complemental strand, 37423125 - 37423077
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||| ||||| |||  ||||| ||||||||||||||||||    
T  37423125 gggtggcatttagcatgggtaagcaaagttttttcccaccatgggaaag 37423077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 42383727 - 42383767
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  42383727 tttagtatgggaaagagaagttgtttcctatcatgggaaag 42383767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 2e-69; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 14318703 - 14318959
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  14318703 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 14318802  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  14318803 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 14318902  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  14318903 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 14318959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 26981964 - 26982220
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26981964 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26982063  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26982064 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26982163  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26982164 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26982220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 26987077 - 26987333
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26987077 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26987176  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26987177 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26987276  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26987277 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26987333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 14314999 - 14315255
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  14314999 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 14315098  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||||||| |    
T  14315099 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttc 14315198  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  14315199 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 14315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 82 - 337
Target Start/End: Complemental strand, 34108343 - 34108089
Alignment:
Q  82 ttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacca 181  Q
    ||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  34108343 ttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacca 34108244  T
Q  182 taaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattccta 281  Q
    ||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||||    
T  34108243 taaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccta 34108144  T
Q  282 ttgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  34108143 ttgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 34108089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 90 - 306
Target Start/End: Original strand, 18608726 - 18608942
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||| ||| ||||   || || |||||||||    
T  18608726 aattttgttacattaacaacataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagttaattgacggaacgataaatctg 18608825  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| ||||| || ||||| |||||||| || ||||||||||||||| ||||||||| |||| |||| || ||||  |||||||||||||| |||||    
T  18608826 taaaatactgttaggagatacgcttggtgtggttgtgcaatacacatcaaggaactcatattatcctgaaggggatttactggtcattcctatttcatcc 18608925  T
Q  290 aatatacagttattggt 306  Q
    |||||||| ||||||||    
T  18608926 aatatacaattattggt 18608942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 80 - 340
Target Start/End: Original strand, 43956937 - 43957196
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||| ||||||||||| ||||||||  |||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||  ||    
T  43956937 atttggacataattttgttgcattaacaacataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctgaaac 43957036  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||| ||||||| | ||||| || ||||| |||||||| || |||||||||| |||| |||||||||  ||| |||| || ||| |  |||||||||    
T  43957037 cataaatttgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaagaactcatagaatcctgaaggggattcgccggtcattcc 43957136  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtgaca 340  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| ||||||||||||    
T  43957137 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtgaca 43957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 81 - 306
Target Start/End: Original strand, 10341046 - 10341271
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||| ||||||||||| |||||| |  |||||| |||||||||||||||||| ||||||||||||||| ||||||||  ||| | |    
T  10341046 tttggacagaattttgttgcattaacaacataattctccctcattctcttactctaaatcatccataaattctctaatgcatgagtgaattgctggaatc 10341145  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||||||||||||| ||||| || ||||| |||||||  || |||||||||| |||| ||||||||| |||| |||| || ||| |  | ||| ||||    
T  10341146 ataaatctgtaaaatattgttaggagatacgcttggtgtagttgtgcaatacacgtcaaggaactcatagtatcatgaaggggattcgccgatcactcct 10341245  T
Q  281 attgcatccaatatacagttattggt 306  Q
    ||||||||||||||||||||||||||    
T  10341246 attgcatccaatatacagttattggt 10341271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 81 - 337
Target Start/End: Original strand, 25953248 - 25953503
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||||||||||||||| |||||| |  ||||||  |||||||||||||||||||||| |||||||||| ||||||||  | | |||    
T  25953248 tttggacagaattttgttacattaacaacataattctccatcattctcatactctaaatcatccatcaattgtctaatgcatgagtgaattgcttgaacc 25953347  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||| |||| |||| ||||| || ||||| | |||||| || |||||||||| |||| ||||||||| || | |||| || ||| |  ||||||||||    
T  25953348 ataaatatgtacaatactgttaggagatacgctaggtgtggttgtgcaatacacgtcaaggaactcatagtaccctgaaggggattcgccggtcattcct 25953447  T
Q  281 attgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||| |||||||||||||||  ||| ||||||  ||||||| |||||||||    
T  25953448 attgcatccattatacagttattggt-gggggcgaatcgtacttaaaggttagtgtg 25953503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 18494264 - 18494395
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||| | ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  18494264 atttggatagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 18494363  T
Q  180 cataaatctgtaaaataatgttaagaaatacg 211  Q
    ||||||||||||||||| ||||| || |||||    
T  18494364 cataaatctgtaaaatactgttaggagatacg 18494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 124 - 337
Target Start/End: Complemental strand, 18885136 - 18884924
Alignment:
Q  124 ttctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgatt 223  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||  ||| ||||||||||||||||||  |||||||| ||| | |||||||||||    
T  18885136 ttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatcctgttaagagatatgcttggtgtgatt 18885037  T
Q  224 ttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaact 323  Q
     ||||||||||||||| ||||| | | |||| |||| ||  ||   |||||||||| |||| ||||||| |||||| ||||||  ||| |||||| |||     
T  18885036 gtgcaatacacatcaaggaacttaaagtatcctgaagggggttcactggtcattcccattgaatccaatctacagtaattggt-gggggcgaatcgaacc 18884938  T
Q  324 taaaagttagtgtg 337  Q
    |||| |||||||||    
T  18884937 taaatgttagtgtg 18884924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 12350702 - 12350596
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||| |||| ||||| |||||||||||| |||||||||||||||||    
T  12350702 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacata-cttttatcatagacact 12350604  T
Q  512 caacacca 519  Q
    ||||||||    
T  12350603 caacacca 12350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 43924490 - 43924598
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| | || ||| || |||||||||||  |||||||||| |||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacata-tttttatcataaacact 43924588  T
Q  512 caacaccaaa 521  Q
    ||||||||||    
T  43924589 caacaccaaa 43924598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 411 - 516
Target Start/End: Original strand, 43971277 - 43971381
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacac 510  Q
    ||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||| ||    
T  43971277 gggtggcgtttagtatggaaatgagaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacata-cttttatcatagagac 43971375  T
Q  511 tcaaca 516  Q
    ||||||    
T  43971376 tcaaca 43971381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 519
Target Start/End: Original strand, 12349967 - 12350073
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | ||||||||||||||||||||||||||||| ||| |||||||| | |||| ||||||||| |||||||  |||||||||||||||||    
T  12349967 ggtggcgtttaatttgggaaagggaagttgtttcccaccatggaaaaactaattttaaccattagataaagtaaagaacat-gcttttatcatagacact 12350065  T
Q  512 caacacca 519  Q
    ||||||||    
T  12350066 caacacca 12350073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 434 - 521
Target Start/End: Original strand, 39257656 - 39257742
Alignment:
Q  434 ggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||| |||||||| ||||    
T  39257656 ggaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacata-cttttatcatagagactcaacatcaaa 39257742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 43925066 - 43924960
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||||||||||||||||||||||| ||||| ||||||||| | || ||| || |||||||||||  ||||||||||||||||    
T  43925066 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacata-tttttatcatagacact 43924968  T
Q  512 caacacca 519  Q
    ||||||||    
T  43924967 caacacca 43924960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 419 - 519
Target Start/End: Complemental strand, 43972127 - 43972028
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||| ||| | ||||||||||||||| ||||||||| ||||||| | |||| |||||| ||||||||||| |||||| |||||||||||||||||    
T  43972127 tttagtatgagaatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacata-cttttaccatagacactcaacacc 43972029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14314904 - 14314963
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  14314904 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 14314963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14318608 - 14318667
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  14318608 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 14318667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 18494169 - 18494228
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  18494169 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 18494228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 26986982 - 26987041
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  26986982 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 26987041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 32574856 - 32574793
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattg 475  Q
    |||||| |||| |||||||| | |||||||||||||||||||| |||||||||||| |||||||    
T  32574856 ggtggcgtttaatatgggaatgagaagttgtttcccaccatggtaaagctaattttcaacattg 32574793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 34108442 - 34108383
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  34108442 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 34108383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 38686337 - 38686411
Alignment:
Q  446 ccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||  ||| |||| |||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  38686337 ccaccatgggaaagtaaatattgaccattagataaagtagagaacat-ggttttatcatagacactcaacaccaaa 38686411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 43956848 - 43956902
Alignment:
Q  23 tttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  43956848 tttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 43956902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 26981868 - 26981927
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||| |||||||||||||||    
T  26981868 ggtgctttctctcatgtgaagagtcatataatgcactataaatgtttgacatttgggcat 26981927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 521
Target Start/End: Original strand, 33801529 - 33801607
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||| ||||  ||| |||| ||||  ||||||||||||||||   ||||||||||||||||||||||||||    
T  33801529 tttcccaccatggaaaagtaaatattgaccattaaataaagtagagaacatgg-ttttatcatagacactcaacaccaaa 33801607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 521
Target Start/End: Complemental strand, 38687073 - 38686995
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    |||||||| |||||||||  ||| |||| |||| |||||||||||||||||   ||||||||||||||||||||| ||||    
T  38687073 tttcccacaatgggaaagtaaatattgatcattagataaagtagagaacat-gattttatcatagacactcaacatcaaa 38686995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 40451035 - 40450968
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    ||||||||||||| |||||||||| ||||| ||||||| |||| |||||| ||| ||| |||||||||    
T  40451035 aggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagat 40450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 35839722 - 35839771
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    ||||||||||||||||||||| ||||||| |||||||| ||| |||||||    
T  35839722 ggtggggtttagcatgggaaagggaagttgtttcccatgatgagaaagtt 35839771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 35840571 - 35840531
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  35840571 tttagcatgggaaagggaagttgtttcccacgatgggaaag 35840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 35943083 - 35943119
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatggg 455  Q
    ||||| |||||||||||||||||||||||||||||||    
T  35943083 tttagcatgggaaagggaagttgtttcccaccatggg 35943119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 40451027 - 40450987
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  40451027 tttagtatgggaaatgtaagttgtttcccaccatgggaaag 40450987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 13935101 - 13935054
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| |||||||||| ||||||||| ||||||| ||||||    
T  13935101 ggtggcatttagcatgggaaaggaaagttgttttccaccataggaaag 13935054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 521
Target Start/End: Complemental strand, 33802391 - 33802313
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||||||  ||| |||| ||||  ||||| ||||||||||   ||||||||||||||||||||| ||||    
T  33802391 tttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacat-ggttttatcatagacactcaacatcaaa 33802313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 42345394 - 42345441
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  42345394 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaag 42345441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 1781939 - 1781877
Alignment:
Q  96 gttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaat 158  Q
    ||||||||||||||| |||| | |  |||||| |||||| |||||||||| ||||||||||||    
T  1781939 gttacattaacaacataattatccctcattctcttactcaaaatcatccaccaattctctaat 1781877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 6012968 - 6013010
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatg 382  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  6012968 aggtggggtttagcatggaaaaaggaagttctttcccaccatg 6013010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 564
Target Start/End: Complemental strand, 12350580 - 12350546
Alignment:
Q  530 ccatattggcccaccacttgcagctgtcccaactc 564  Q
    |||||||||||||||||||| ||||||||||||||    
T  12350580 ccatattggcccaccacttgtagctgtcccaactc 12350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 35943075 - 35943117
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatg 382  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  35943075 aggtggggtttagcatgggaaagggaagttgtttcccaccatg 35943117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 459
Target Start/End: Original strand, 7054088 - 7054137
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||| ||||||| ||  |||||||||||||||||| ||||    
T  7054088 agggtggcatttagcatgggaatggagagttgtttcccaccatggaaaag 7054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 35840578 - 35840529
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    ||||||||||||||||||||| ||||||| |||||||  ||| |||||||    
T  35840578 ggtggggtttagcatgggaaagggaagttgtttcccacgatgggaaagtt 35840529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 25953167 - 25953211
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatg 61  Q
    |||||||||||||| ||| ||| |||||||||| |||||||||||    
T  25953167 gggtgttttctctcatgtgaatggtcatataatgcactataaatg 25953211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 38660083 - 38660111
Alignment:
Q  419 tttagtatgggaaagggaagttgtttccc 447  Q
    |||||||||||||||||||||||||||||    
T  38660083 tttagtatgggaaagggaagttgtttccc 38660111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 2e-69; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 12856905 - 12856649
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  12856905 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 12856806  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  12856805 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 12856706  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  12856705 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 12856649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 26051137 - 26050881
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26051137 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26051038  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26051037 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26050938  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26050937 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 26056250 - 26055994
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26056250 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26056151  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26056150 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26056051  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26056050 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26055994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 26060496 - 26060240
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26060496 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26060397  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26060396 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26060297  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26060296 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26060240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 26065609 - 26065353
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  26065609 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 26065510  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  26065509 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 26065410  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  26065409 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 26065353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 80 - 306
Target Start/End: Complemental strand, 12851790 - 12851564
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  12851790 atttggacaaaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 12851691  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| || |||||||||    
T  12851690 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcc 12851591  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||| ||||||||    
T  12851590 tattgcatccaatatacatttattggt 12851564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 14610480 - 14610224
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  14610480 atttggacagaattttgttacattaacaacataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 14610381  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| ||||  |||||||| |||| |||| || ||| | ||||||||||    
T  14610380 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaagaaactcatagtatcctgaaggggattcgctggtcattcc 14610281  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  14610280 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 14610224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 101 - 337
Target Start/End: Complemental strand, 11056720 - 11056485
Alignment:
Q  101 attaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgt 200  Q
    |||||||||| |||||||   |||||| ||||| ||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||| | |    
T  11056720 attaacaacataattctttatcattctcttactttaaatcatccatcaattctttaatgcatgagtgaattgttggaaccataaatctgtaaaatactat 11056621  T
Q  201 taagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagtt 300  Q
    || || ||||||||||||||||| ||||| |||| |||| ||||||||| |||| |||| || ||| || |||||||| |||||||||||||||||||||    
T  11056620 taggagatacgtttggtgtgattgtgcaacacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcatattgcatccaatatacagtt 11056521  T
Q  301 attggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||  ||| ||||||| || |||| |||||||||    
T  11056520 attggt-gggggcgaatcacacataaaggttagtgtg 11056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 19 - 306
Target Start/End: Original strand, 37459857 - 37460155
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca-----------attttgttacattaaca 107  Q
    |||||||||||| ||| ||| | |||||||| |||||||||| ||||||||||||||||  || |||||| |           ||| |||||||| ||||    
T  37459857 gtgttttctctcatgtgaatggacatataatgcactataaatacttgacatttgggcattaatatggacatacaaatataggaattatgttacatgaaca 37459956  T
Q  108 acacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaa 207  Q
    ||| |||||| |  |||||| ||||||||||||||||||||||||||| ||||||||| |||||  ||  |||||| |||||||||||| |||||||| |    
T  37459957 acataattctcccacattctcttactctaaatcatccatcaattctctgatgcattagcgaattgctgaaaccatatatctgtaaaatattgttaagaga 37460056  T
Q  208 tacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggt 306  Q
    |||| ||| |||| || ||||||||||||||| ||||||||| |||| ||||  | |||  | |||||||| |||||||||||||||||||||||||||    
T  37460057 tacgcttgatgtggttgtgcaatacacatcaaggaactcatagtatcatgaagtggattcatcggtcattcttattgcatccaatatacagttattggt 37460155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 18 - 340
Target Start/End: Original strand, 4181396 - 4181728
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttgg---acaca---------attttgttacattaa 105  Q
    ||||||||||||| | | || ||||||||||| ||||||||||| |||||||||||||||  |||||    |||||         |||||||| ||||||    
T  4181396 ggtgttttctctcatatgaagagtcatataatgcactataaatgtttgacatttgggcattaatttgacacacacataaacgagaattttgttgcattaa 4181495  T
Q  106 caacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaaga 205  Q
    ||||| |||||| |  |||||| ||| |||||||||||||||||||||||||||||| |||| |||  | | |||||||| | |||||||| |||||  |    
T  4181496 caacataattctccctcattctcttaatctaaatcatccatcaattctctaatgcatgagtg-attgctcgaaccataaacccgtaaaatactgttagta 4181594  T
Q  206 aatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattgg 305  Q
     ||||| ||| |||| || |||||||||  |||| ||||||||| |||| |||| || |||   |||||||||| ||||||||||||||| |||||||||    
T  4181595 gatacgcttgatgtggttgtgcaatacatgtcaaggaactcatagtatcatgaaggggattctctggtcattccaattgcatccaatatagagttattgg 4181694  T
Q  306 taagggacgaatcaaacttaaaagttagtgtgaca 340  Q
    |  |||| ||||| ||| |||| ||||||||||||    
T  4181695 t-ggggaagaatcgaacctaaaggttagtgtgaca 4181728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 123 - 306
Target Start/End: Original strand, 35352422 - 35352605
Alignment:
Q  123 attctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgat 222  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||||| ||||| ||  |||  ||| |||| |    
T  35352422 attctcttactataaaccatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaggagttactcttgatgtggt 35352521  T
Q  223 tttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggt 306  Q
    | ||||||||||||||  ||||||||| |||| ||||  | ||| | |||||||||||||||||||||||||||| ||||||||    
T  35352522 tgtgcaatacacatcatggaactcatagtatcctgaagaggattcgctggtcattcctattgcatccaatatacaattattggt 35352605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 5436692 - 5436845
Alignment:
Q  154 ctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatat 253  Q
    ||||||||||||||||||  | | ||||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| || |||||| |||    
T  5436692 ctaatgcattagtgaattgcttgaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 5436791  T
Q  254 cttgaaaggaatttgttggtcattcc-tattgcatccaatatacagttattggt 306  Q
    | | || |||||| |  ||||||||| |||||||||||||||||||||||||||    
T  5436792 cctcaagggaattcgccggtcattccttattgcatccaatatacagttattggt 5436845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 494
Target Start/End: Complemental strand, 46759311 - 46759228
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacatac 494  Q
    ||||||||||||||||||||||||| |||||||||||| ||| | ||||||||| |||| |||| |||||||||||||||||||    
T  46759311 gggtggcatttagtatgggaaaggggagttgtttcccatcatagcaaagctaatcttgaccattagataaagtagagaacatac 46759228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 520
Target Start/End: Original strand, 46757431 - 46757531
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||||||||| | |||||||| |||||||| |||||  ||| |||| |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  46757431 tttagtatgggaaagaggagttgttttccaccatgagaaagtaaatattgaccattagataaagtagagaacata-attttatcatagacactcaacacc 46757529  T
Q  519 aa 520  Q
    ||    
T  46757530 aa 46757531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 519
Target Start/End: Original strand, 27599211 - 27599317
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||| ||| ||||| |||| ||| |||||  ||||| |  | ||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacaca-ttcttatcatagacact 27599309  T
Q  512 caacacca 519  Q
    ||||||||    
T  27599310 caacacca 27599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 5440388 - 5440492
Alignment:
Q  92 ttttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgta 191  Q
    |||| |||||||||||||| |||||| |  |||||  ||||||||||||||| ||||||||||||| || | ||| ||||  ||| |||||| |||||||    
T  5440388 ttttattacattaacaacataattctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgta 5440487  T
Q  192 aaata 196  Q
    |||||    
T  5440488 aaata 5440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 5449398 - 5449502
Alignment:
Q  92 ttttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgta 191  Q
    |||| |||||||||||||| |||||| |  |||||  ||||||||||||||| ||||||||||||| || | ||| ||||  ||| |||||| |||||||    
T  5449398 ttttattacattaacaacataattctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgta 5449497  T
Q  192 aaata 196  Q
    |||||    
T  5449498 aaata 5449502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 519
Target Start/End: Complemental strand, 27600144 - 27600037
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacac 510  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||| ||| ||||| || | ||| |||||  ||||| |  | ||||||||||| |    
T  27600144 gggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacaca-ttcttatcatagactc 27600046  T
Q  511 tcaacacca 519  Q
    |||||||||    
T  27600045 tcaacacca 27600037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 12857000 - 12856941
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  12857000 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 12856941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 466
Target Start/End: Complemental strand, 35771300 - 35771253
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattt 466  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  35771300 tttagtatgggaaagcaaagttgtttcccaccatgggaaagctaattt 35771253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 9122650 - 9122692
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgg 454  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  9122650 ggtggcatttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 32548721 - 32548655
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||||||||||| ||||||||||  | || ||||||| |||| ||||||||||||||||||||||||    
T  32548721 ggtggggtttagtatgggaaatgatacttgtttcccaccatgggaaagttaatgttagccattagat 32548655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 5064694 - 5064645
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagt 389  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  5064694 aggtggggtttagcatgggaatgggaagttctttcccatcatgggaaagt 5064645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 5440292 - 5440365
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca 90  Q
    |||||||||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| |  |||||||||||    
T  5440292 gggtgttttctctcatgtgaagggtcatataatgcactataaatgcttggcatttgggctttaatttggacaca 5440365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 5449302 - 5449375
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca 90  Q
    |||||||||||||| ||| ||  |||||||||| ||||||||||||||| ||||||||| |  |||||||||||    
T  5449302 gggtgttttctctcatgtgaagggtcatataatgcactataaatgcttggcatttgggctttaatttggacaca 5449375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 12851887 - 12851828
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||| ||||||||||||||||    
T  12851887 ggtgctttctctcatgtgaagagtcatataatgcactataaatacttgacatttgggcat 12851828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26051232 - 26051173
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  26051232 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttaggcat 26051173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26056345 - 26056286
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  26056345 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttaggcat 26056286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26060591 - 26060532
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  26060591 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttaggcat 26060532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26065704 - 26065645
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  26065704 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttaggcat 26065645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 337
Target Start/End: Complemental strand, 14615355 - 14615290
Alignment:
Q  271 ggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||||||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  14615355 ggtcattcctattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 14615290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 516
Target Start/End: Original strand, 12732254 - 12732350
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaaca 516  Q
    ||||| |||||||||||||   |||||||||||||||||||  ||| |||| |||| ||| | ||| ||||||||  ||||||||||||| |||||||    
T  12732254 tttagcatgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacata-gttttatcatagactctcaaca 12732350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 6730198 - 6730162
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatggg 455  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6730198 tttagcatgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 6730208 - 6730164
Alignment:
Q  338 acaggtggggtttagcatgggaaatggaagttctttcccatcatg 382  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||    
T  6730208 acaggtggggtttagcatgggaaagggaagttgtttcccaccatg 6730164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 24995859 - 24995899
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  24995859 tttagaatgggaaaggggagttgtttcccaccatgggaaag 24995899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 24996724 - 24996684
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  24996724 tttagcatgggaaaggggagttgtttcccaccatgggaaag 24996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 45887277 - 45887345
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggat 478  Q
    |||||||| |||| | |||||||||  |||| ||||||||||||||||||||  |||||| ||||||||    
T  45887277 agggtggcgtttaatttgggaaaggctagttttttcccaccatgggaaagctttttttgaccattggat 45887345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 35352336 - 35352387
Alignment:
Q  40 gtcatataatacactataaatgcttgacatttgggcatcgatttggacacaa 91  Q
    |||||||||| ||| ||| |||||||||||||||||||  ||||||||||||    
T  35352336 gtcatataatgcaccatatatgcttgacatttgggcattaatttggacacaa 35352387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 45888028 - 45887962
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggat 478  Q
    ||||||||||| | |||||||||  |||| ||||||||||||||||||||  || ||| ||||||||    
T  45888028 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattggat 45887962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 14629819 - 14629868
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    ||||| |||||| |||||||| ||||||||||| |||||||| |||||||    
T  14629819 ggtggagtttagtatgggaaagggaagttcttttccatcatgggaaagtt 14629868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 24995847 - 24995900
Alignment:
Q  336 tgacaggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagt 389  Q
    ||||||||||||||||| |||||||| || |||| ||||||| |||| ||||||    
T  24995847 tgacaggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaagt 24995900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 459
Target Start/End: Original strand, 46756268 - 46756317
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||| |||| | ||||||||||||||||||| ||||||||| ||||    
T  46756268 agggtggcgtttaatttgggaaagggaagttgttttccaccatggaaaag 46756317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 14629826 - 14629866
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  14629826 tttagtatgggaaagggaagttcttttccatcatgggaaag 14629866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 29060780 - 29060740
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| | |||||||||||||||||||||    
T  29060780 tttagcatgggaaaggggaattgtttcccaccatgggaaag 29060740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 42607088 - 42607128
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| | |||||||||||||||||||||    
T  42607088 tttagcatgggaaaggggaattgtttcccaccatgggaaag 42607128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 2e-69; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 21275889 - 21275633
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  21275889 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 21275790  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  21275789 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 21275690  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  21275689 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 21275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 81 - 303
Target Start/End: Original strand, 20752207 - 20752429
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||| | ||||||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||||||||||| |||||| |||||||| |||| |||    
T  20752207 tttggaaagaattttgttacattaacaacataattcttcaccattctcttactataagtcatccatcaattctctgatgcatgagtgaattgttggaacc 20752306  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| |||||| || |||| |||| || ||| |  ||||||||||    
T  20752307 ataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcgtagtatcctgaaggggattcgccggtcattcct 20752406  T
Q  281 attgcatccaatatacagttatt 303  Q
    |||||||||||||||||||||||    
T  20752407 attgcatccaatatacagttatt 20752429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 14 - 306
Target Start/End: Original strand, 24508849 - 24509142
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttgg-acacaattttgttacattaacaacaca 112  Q
    ||||||||||||||||| ||  ||  ||||||| ||  ||| |||||| ||| |||||||||||  |||| | ||| |||| |||||||||||||||| |    
T  24508849 aaggggtgttttctctcatgagaagggtcatattatgtactgtaaatgtttggcatttgggcattaattttgtacaaaattatgttacattaacaacata 24508948  T
Q  113 attcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgt 212  Q
    ||||| |  |||||| |||||||||||||||||||||||||||||||||| |||||||| |||| | ||||||| ||||||||| ||||| || |||||     
T  24508949 attctccatcattcttttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaatcataaatttgtaaaatactgttaggagatacgc 24509048  T
Q  213 ttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggt 306  Q
    |||||||| || |||||||||| |||| ||||||||| |||  |||| || ||| |  | ||||||||||||||||||||||| ||||||||||    
T  24509049 ttggtgtggttgtgcaatacacgtcaaggaactcatagtattatgaaggggattcgccgatcattcctattgcatccaatatatagttattggt 24509142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 24509818 - 24509593
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||| ||| |||| |||||||||||||||| |||||| |  |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| |||    
T  24509818 tttgtacaaaattatgttacattaacaacataattctccatcattcttttactttaaatcatccatcaattctctaatgcattagtgaattgttggaacc 24509719  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||| ||||||||| ||||| || |||||  ||||||| || ||||||||||||||| ||||||||| |||  |||| || ||| |  | ||||||||    
T  24509718 ataaatttgtaaaatactgttaggagatacgcatggtgtggttgtgcaatacacatcaaggaactcatagtattatgaaggggattcgccgatcattcct 24509619  T
Q  281 attgcatccaatatacagttattggt 306  Q
    ||||||||||||||| ||||||||||    
T  24509618 attgcatccaatatatagttattggt 24509593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 90 - 306
Target Start/End: Original strand, 11183264 - 11183480
Alignment:
Q  90 aattttgttacattaacaacacaattcttctc-cattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatct 188  Q
    |||||||||||| ||| |||| |||||| ||| |||||| ||||||||||||||| |||||||||||||||||| ||| ||||  ||  |||||||| ||    
T  11183264 aattttgttacaataataacataattct-ctctcattctcttactctaaatcatcaatcaattctctaatgcatgagtaaattgctgaaaccataaacct 11183362  T
Q  189 gtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatc 288  Q
    |||||||| ||||| || |||| ||||||||| || || |||||||||||| ||||||||||||||||||| || |||   || ||||||| ||  ||||    
T  11183363 gtaaaatactgttaggagatacatttggtgtggttgtgtaatacacatcaaggaactcataatatcttgaatgggattcactgatcattcccatcacatc 11183462  T
Q  289 caatatacagttattggt 306  Q
    ||||||||||||||||||    
T  11183463 caatatacagttattggt 11183480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 2887600 - 2887392
Alignment:
Q  86 acacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaa 185  Q
    ||||||||||||| ||||| ||||| |||||| |  |||||| ||||||||||||||||||||| |||||||||||| ||||||||  ||| | ||||||    
T  2887600 acacaattttgttccattaccaacataattctccctcattctcttactctaaatcatccatcaactctctaatgcatgagtgaattgctggaatcataaa 2887501  T
Q  186 tctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc-tattg 284  Q
    ||||||||||| |||||||| |||  ||||||||| || |||||||||| | || ||| ||||| |||| ||||  | ||| || ||||||||| |||||    
T  2887500 tctgtaaaatagtgttaagagatatatttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgtcggtcattccttattg 2887401  T
Q  285 catccaata 293  Q
    |||||||||    
T  2887400 catccaata 2887392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 81 - 306
Target Start/End: Complemental strand, 21937684 - 21937460
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| |||||||| |||||||||||| |||| | |  || ||| ||| |||||| ||||||||||||||| ||||||| ||||||||  ||| |||    
T  21937684 tttggacataattttgt-acattaacaacataattttccatcactctcttattctaaaacatccatcaattctcaaatgcatgagtgaattgctggaacc 21937586  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcct 280  Q
    |||||| |||| |||| ||||| || ||||| |||||||| || ||||||||||| ||| ||||||||| |||| | || || ||| |  ||||||||||    
T  21937585 ataaatttgtataatattgttacgagatacgcttggtgtggttgtgcaatacacaacaaggaactcatagtatcctaaaggggattcgccggtcattcct 21937486  T
Q  281 attgcatccaatatacagttattggt 306  Q
    |||||||||||||||  |||||||||    
T  21937485 attgcatccaatatatggttattggt 21937460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 93 - 306
Target Start/End: Original strand, 21936781 - 21936994
Alignment:
Q  93 tttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaa 192  Q
    |||||||||||||||||| |||||| |  ||||||  |||||||||||||| |||||||||||||||||| ||||||||  ||| |||||||||||||||    
T  21936781 tttgttacattaacaacataattctccatcattctcatactctaaatcatctatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaa 21936880  T
Q  193 aataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaat 292  Q
    |||| | ||| || ||||  | | |||| || ||||||||||||||| ||||||||| |||  |||| || |||    |  ||||||||||||||| |||    
T  21936881 aatattattaggagatacactcgatgtggttgtgcaatacacatcaaggaactcatagtattctgaaggggattctccgaccattcctattgcatctaat 21936980  T
Q  293 atacagttattggt 306  Q
    ||||| ||||||||    
T  21936981 atacaattattggt 21936994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 2889322 - 2889114
Alignment:
Q  86 acacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaa 185  Q
    ||||||||||||| ||||| ||||| |||||| |  |||||| |||||||||||||| |||||| |||||||||||| ||||||||  ||| | ||||||    
T  2889322 acacaattttgttccattaccaacataattctccctcattctcttactctaaatcattcatcaactctctaatgcatgagtgaattgctggaatcataaa 2889223  T
Q  186 tctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc-tattg 284  Q
    ||||||||||| |||||||| |||  ||||||||| || |||||||||| | || ||| ||||| |||| ||||  | ||| |  ||||||||| |||||    
T  2889222 tctgtaaaatagtgttaagagatatatttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgccggtcattccttattg 2889123  T
Q  285 catccaata 293  Q
    |||||||||    
T  2889122 catccaata 2889114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 519
Target Start/End: Original strand, 27763413 - 27763519
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||| |||||| | |||| ||||||||||||||||||||| |||||| |||||||||| | || ||| || |||||||||||  |||||||| |||||||    
T  27763413 ggtgacatttaatttggggaagggaagttgtttcccaccaagggaaaactaattttgaccgttagattaaatagagaacata-tttttatcaaagacact 27763511  T
Q  512 caacacca 519  Q
    ||||||||    
T  27763512 caacacca 27763519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 21275984 - 21275925
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  21275984 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 21275925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 21936675 - 21936738
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||||||| ||| ||  |||||||||| |||||||||||||| ||||||||||||    
T  21936675 aaggggtgttttctctcatgtgaagggtcatataatgcactataaatgcttaacatttgggcat 21936738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 24509912 - 24509852
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||||| ||| ||   ||||||||| |||||||||||||||||||||||||||    
T  24509912 gggtgttttctctcatgtgaaggttcatataatgcactataaatgcttgacatttgggcat 24509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 24125972 - 24126019
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaag 24126019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 24126766 - 24126719
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaag 24126719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 450
Target Start/End: Original strand, 8383191 - 8383229
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccacc 450  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  8383191 ggtggcatttagtataggaaaggggagttgtttcccacc 8383229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 29290123 - 29290184
Alignment:
Q  341 ggtggggtttagcatgggaaatgga-agttctttcccatcatgtgaaagttaatgttagccat 402  Q
    ||||||||||||||||| ||||||| |||| ||||||| |||| |||||||||||||| ||||    
T  29290123 ggtggggtttagcatgg-aaatggagagttgtttcccaccatgggaaagttaatgttaaccat 29290184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 4311237 - 4311192
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatggga 456  Q
    ||||||| ||||||||||| ||| |||||| |||||||||||||||    
T  4311237 gggtggcgtttagtatgggtaagtgaagttttttcccaccatggga 4311192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 16764932 - 16764968
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatggg 455  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  16764932 tttagcatgggaaaggaaagttgtttcccaccatggg 16764968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 458
Target Start/End: Original strand, 25371167 - 25371215
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    |||||||  ||||| ||||||||| ||| ||||||||||||||||||||    
T  25371167 agggtggggtttagcatgggaaagtgaacttgtttcccaccatgggaaa 25371215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 2e-69; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 35096144 - 35095888
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  35096144 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 35096045  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  35096044 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 35095945  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  35095944 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 35095888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 81 - 306
Target Start/End: Original strand, 30019939 - 30020165
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  30019939 tttggacagaattttgttacattaacaacataattcttcaccattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaacc 30020038  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc- 279  Q
    |||||| ||| ||||| ||||| || |||||||||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||     
T  30020039 ataaatatgtgaaatactgttaggagatacgtttggtgtggttatgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcct 30020138  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||||||||||||    
T  30020139 tattgcatccaatatacagttattggt 30020165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 35091031 - 35090775
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||| ||   ||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  35091031 atttggacagaattttgttacattaacaacataattcatcaaaattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 35090932  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  35090931 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 35090832  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  35090831 tattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 35090775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 81 - 337
Target Start/End: Original strand, 32429372 - 32429628
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| |||||||||  |||||||||| |||||| |  |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||    
T  32429372 tttggacagaattttgttggattaacaacataattctccctcattctcttactctaaatcatccatcaattctttaatgcatgagtgaattgttggaacc 32429471  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc- 279  Q
    |||||||||||||||| ||||| || ||||| || ||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||     
T  32429472 ataaatctgtaaaatactgttaggagatacgctttgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcct 32429571  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||||||||||||  ||| |||||| ||| |||| |||||||||    
T  32429572 tattgcatccaatatacagttattggt-gggggcgaatcgaacctaaaggttagtgtg 32429628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 54859169 - 54859500
Alignment:
Q  16 ggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacacaa------------ttttgttacatt 103  Q
    ||||||||||||||| ||| ||  |||||||||| |||||||||||||||| ||||||||||  ||||||||||||            |||||| |||||    
T  54859169 ggggtgttttctctcatgtgaagggtcatataatgcactataaatgcttgatatttgggcattaatttggacacaaccaaaaatggaattttgtcacatt 54859268  T
Q  104 aacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaa 203  Q
    |||||||  ||||| |  |||||| || ||||||||||||||||||||||||||||||  ||||||||  ||| |||||||||| |||||||| |||||     
T  54859269 aacaacatgattctccctcattctcttgctctaaatcatccatcaattctctaatgcacgagtgaattgctggaaccataaatccgtaaaatactgttag 54859368  T
Q  204 gaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttatt 303  Q
    || |||||||||||||  || || |||||||||||| ||||||||| |||| |||| ||  || | |||| ||||||||||||||||||||||| |||||    
T  54859369 gagatacgtttggtgtagttgtgtaatacacatcaaggaactcatattatcatgaaggggtttcgctggtaattcctattgcatccaatatacaattatt 54859468  T
Q  304 ggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||  |||||||||  ||| |||| |||||||||    
T  54859469 ggt--gggacgaattgaacataaaggttagtgtg 54859500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 90 - 340
Target Start/End: Original strand, 34279589 - 34279838
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||||||||||| ||||||||  | |||| ||||||||||||| |||||||||||||||||||| ||||||||  ||  ||||||||||||    
T  34279589 aattttgttacattaacaacataattcttcctcgttctcttactctaaatcaaccatcaattctctaatgcatgagtgaattcctgaaaccataaatctg 34279688  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| ||||| || ||||| |||||||| || |||||||||| ||||  |||||||| ||| ||||| || | | || ||||||||||||||||| |    
T  34279689 taaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaagaaactcatagtattttgaaggggaatcgtcggtcattcctattgcattc 34279788  T
Q  290 aatatacagttattggtaagggacgaatcaaacttaaaagttagtgtgaca 340  Q
    |||||||||||||||||  ||| |||||| ||  |||| ||||||||||||    
T  34279789 aatatacagttattggt-gggggcgaatcgaagctaaaggttagtgtgaca 34279838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 122 - 340
Target Start/End: Original strand, 3424830 - 3425047
Alignment:
Q  122 cattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaatacgtttggtgtga 221  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||| ||| ||| | ||||||||||||||||| ||||| || ||||| ||||||||     
T  3424830 cattctcttactctaaatcatccattaattctctaatgcatgagtgagttactggaaacataaatctgtaaaatactgttaggagatacggttggtgtgg 3424929  T
Q  222 ttttgcaatacacatcaatgaactcataatatcttgaaagga-atttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaa 320  Q
    || ||||||||||||||||||||||||| |||| | |||||| ||| | || |||||||||||||||||||||| |||||||||||  |||| ||||| |    
T  3424930 ttgtgcaatacacatcaatgaactcatagtatcct-aaaggagattcgctgttcattcctattgcatccaatattcagttattggtggggga-gaatcga 3425027  T
Q  321 acttaaaagttagtgtgaca 340  Q
    || |||| ||||||||||||    
T  3425028 acctaaaggttagtgtgaca 3425047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 90 - 304
Target Start/End: Complemental strand, 47071514 - 47071300
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||||||||||| |||||| |  |||||| ||||||||||| ||| ||||||||||||||| || |||||||| || | ||||||||| ||    
T  47071514 aattttgttacattaacaacataattctccctcattctcttactctaaattatctatcaattctctaatgaatgagtgaattgtttgaaccataaatttg 47071415  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatcc 289  Q
    ||||||| || || || ||| | |||||||| || ||||||||||||||| ||||||||| |||| |||| || ||| | ||||||||| |||||||||     
T  47071414 taaaatactgatatgagatatgattggtgtggttgtgcaatacacatcaaggaactcatagtatcatgaaggggattcgctggtcattcatattgcatca 47071315  T
Q  290 aatatacagttattg 304  Q
    |||||||| ||||||    
T  47071314 aatatacaattattg 47071300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 34128254 - 34128542
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttg-------gacacaa---ttttgttacattaacaa 108  Q
    |||||||||||  ||| ||  |||||||||| ||||||||||||||||||||||| |||  |||||       || ||||   ||||||| ||||||||     
T  34128254 gtgttttctctaatgtgaagggtcatataatgcactataaatgcttgacatttggccattaatttgacactaagaaacaagaattttgttgcattaacat 34128353  T
Q  109 cacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgttaagaaat 208  Q
    || |||||| |  |||||| ||||||||||||||||||||||| |||||||||| |||||||| |||  |||||||||||||||||||  |||| || ||    
T  34128354 cataattctccctcattctcttactctaaatcatccatcaattttctaatgcatgagtgaattgttgaaaccataaatctgtaaaatatggttaggagat 34128453  T
Q  209 acgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatataca 297  Q
    | |||||||||| || |||||||||| |||   |||||||| |||| |||| |  ||||| ||||||||||| ||||||||||||||||    
T  34128454 atgtttggtgtggttgtgcaatacacctcatgaaactcatagtatcctgaaggagatttgctggtcattccttttgcatccaatataca 34128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 90 - 337
Target Start/End: Complemental strand, 18716595 - 18716346
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||| ||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||| ||  ||||||||  ||| ||||||||||||    
T  18716595 aattttgttgcattaacaacataattctcccccattctcttactctaaatcatccatcaattctctaatacaagagtgaattgctggaaccataaatctg 18716496  T
Q  190 taaaataatgttaagaaatacgtttg--gtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattc-ctattgca 286  Q
    ||||||| | |||  | ||||| |||  ||||| || |||||||||| |||| |||||| || |||| |||| || ||| |  ||||||||  |||||||    
T  18716495 taaaatactattagaagatacgcttggtgtgtggttgtgcaatacacgtcaaagaactcttagtatcctgaaggggattcgccggtcattctttattgca 18716396  T
Q  287 tccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||| ||||||||||  ||| |||||| ||| |||| |||||||||    
T  18716395 tccaatatatagttattggt-gggggcgaatcgaacctaaaggttagtgtg 18716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 90 - 306
Target Start/End: Complemental strand, 18670946 - 18670732
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    |||| |||| ||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||    
T  18670946 aattatgttgcattaacaacataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgacttgttggaaccataaatctg 18670847  T
Q  190 taaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc-tattgcatc 288  Q
    ||||||| ||||| || ||||  |||||||| || ||||||  |||| || ||||||||| |||| || |||| ||| |  ||||||||| ||||||||     
T  18670846 taaaatattgttaggagatacacttggtgtggttgtgcaat--acatgaaggaactcatagtatcctg-aagggattcgccggtcattccttattgcatt 18670750  T
Q  289 caatatacagttattggt 306  Q
    ||||||| ||||||||||    
T  18670749 caatatatagttattggt 18670732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 178 - 306
Target Start/End: Original strand, 3415338 - 3415466
Alignment:
Q  178 accataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcatt 277  Q
    ||||||||||||||||||| | ||| || ||||| |||||||| || ||||||||||||||||||||||||| |||| |||| |  ||| ||||||||||    
T  3415338 accataaatctgtaaaatactattaggagatacggttggtgtggttgtgcaatacacatcaatgaactcatagtatcctgaaggagattcgttggtcatt 3415437  T
Q  278 cctattgcatccaatatacagttattggt 306  Q
    |||||| ||||||||||||||||||||||    
T  3415438 cctattacatccaatatacagttattggt 3415466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 90 - 306
Target Start/End: Complemental strand, 18737268 - 18737049
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||| ||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||| ||| ||||||||  ||| ||||||||||||    
T  18737268 aattttgttgcattaacaacataattctccctcattctcttactctaaatcatccatcaattctctaattcatgagtgaattgctggaaccataaatctg 18737169  T
Q  190 taaaataatgttaagaaatacgtttg--gtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattc-ctattgca 286  Q
    ||||||| | |||  | || || |||  ||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||||||||  |||||||    
T  18737168 taaaatacttttagaagattcgcttggtgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattctttattgca 18737069  T
Q  287 tccaatatacagttattggt 306  Q
    || |||||| ||||||||||    
T  18737068 tctaatatatagttattggt 18737049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 6247519 - 6247412
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||||||||||||||| || ||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  6247519 ggtggcgtttaatttgggaaagggaagttgtttctcatcatgggaaaactaattttgatcattagataaagtagagaacatactttttatcatagacact 6247420  T
Q  512 caacacca 519  Q
    ||||||||    
T  6247419 caacacca 6247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 6246784 - 6246937
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||| |||||||||||||||||    
T  6246784 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacata-cttttatcatagacact 6246882  T
Q  512 caacacca--aacnnnnnnnccatattggcccaccacttgcagctgtcccaactc 564  Q
    ||||| ||            |||||||||||||||||||||||||||||||||||    
T  6246883 caacatcattttttttttttccatattggcccaccacttgcagctgtcccaactc 6246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 10421615 - 10421523
Alignment:
Q  426 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacca 519  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || ||| || |||||||||||  ||||||||||||||||||||||||    
T  10421615 tgggaaagggaagttgttttccaccatgggaaagctaattttgaccgttagattaaatagagaacata-tttttatcatagacactcaacacca 10421523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 14643828 - 14643940
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||| ||||||| ||||||||   ||||| ||||||||||||||||||||||||||||||| ||  |||||||  ||| |||||||||||     
T  14643828 aattttgttacatcaacaacataattcttcctaattctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctc 14643927  T
Q  190 taaaataatgtta 202  Q
    ||||||| |||||    
T  14643928 taaaatactgtta 14643940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 426 - 521
Target Start/End: Original strand, 15481049 - 15481143
Alignment:
Q  426 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    |||| |||||||||||||||||  |||||||||||||||||||| | || ||| || |||||||||||  ||||||||||||| ||||||||||||    
T  15481049 tggggaagggaagttgtttcccgtcatgggaaagctaattttgaccgttagattaaatagagaacata-tttttatcatagactctcaacaccaaa 15481143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 14646483 - 14646579
Alignment:
Q  207 atacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttatt 303  Q
    ||||| |||||||| || |||||||||||| || ||||||||| |||| | || || ||| |  |||||||||||||||||||||||||||||||||    
T  14646483 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttatt 14646579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 481
Target Start/End: Complemental strand, 232090 - 232028
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaa 481  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| | |||| ||||||    
T  232090 tttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagataaa 232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 519
Target Start/End: Complemental strand, 15481601 - 15481512
Alignment:
Q  429 gaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacca 519  Q
    ||||||||||||||||||||| |||||||| |||||||||| |  | ||| || |||||||||||  |||||||||||| |||||||||||    
T  15481601 gaaagggaagttgtttcccacaatgggaaaactaattttgaccggtagattaaatagagaacata-tttttatcatagaaactcaacacca 15481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 33369906 - 33369975
Alignment:
Q  338 acaggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    ||||||||| ||||||||||||||||  | || ||||||| |||| ||||||||||||||||||||||||    
T  33369906 acaggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagttaatgttagccattagat 33369975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 519
Target Start/End: Complemental strand, 45331502 - 45331395
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacac 510  Q
    ||||||||||||  ||| ||||||| ||||||||||||||||| ||||| ||| ||||| |||| ||| |||||  ||||| |  | |||||||||||||    
T  45331502 gggtggcatttaaaatgagaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagattaagtaatgaacaca-ttcttatcatagacac 45331404  T
Q  511 tcaacacca 519  Q
    |||||||||    
T  45331403 tcaacacca 45331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 564
Target Start/End: Original strand, 10420965 - 10421067
Alignment:
Q  460 ctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaacnnnnnnnccatattggcccaccacttgcagctgtccc 559  Q
    |||||||||| |||| |||||| |||| ||||||| |||||||||||||||||||||||| |        |||||||| ||||||||||||||||| |||    
T  10420965 ctaattttgaccattagataaactagataacatac-ttttatcatagacactcaacaccaga-tttttttccatattgacccaccacttgcagctgcccc 10421062  T
Q  560 aactc 564  Q
    |||||    
T  10421063 aactc 10421067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 33370924 - 33370857
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||||||||||||||||||||| |  | || ||||||| |||| ||||||||||||||||||||||||    
T  33370924 aggtggggtttagcatgggaaaggatacttgtttcccaccatgggaaagttaatgttagccattagat 33370857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35091126 - 35091067
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  35091126 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 35091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35096239 - 35096180
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  35096239 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 35096180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 521
Target Start/End: Complemental strand, 50710435 - 50710357
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||||||  ||| |||| |||| |||||||||||||||||    |||||||||||||||||||||||||    
T  50710435 tttcccaccatgggaaagtaaatattgaccattagataaagtagagaacat-gaatttatcatagacactcaacaccaaa 50710357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 55514403 - 55514352
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagcta 462  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  55514403 gggtgccatttagcatgggaaaggaaagttgtttcccaccatgggaaagcta 55514352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 516
Target Start/End: Original strand, 30808621 - 30808724
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacatacctt-ttatcatagacac 510  Q
    |||||||||||  ||||||||||  ||||||||||||||||||||||| ||| ||||| |||| ||| |||||  ||  |||| || |||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatga--atacattcttatcatagacac 30808718  T
Q  511 tcaaca 516  Q
    ||||||    
T  30808719 tcaaca 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 22118912 - 22118857
Alignment:
Q  22 ttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  22118912 ttttctctcatgtgaagggtcatataatatactataaatgcttgacatttgggcat 22118857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 23425255 - 23425208
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||    
T  23425255 ggtggcatttagtatgggaatggagagttgtttcccaccatgggaaag 23425208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 25970851 - 25970804
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||    
T  25970851 ggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaag 25970804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 30809553 - 30809447
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||  ||||||||||| |||||||| |||||||| ||||| ||| ||||| || | ||| |||||  ||||| |  ||||||||||||| ||    
T  30809553 ggtggcatttaaaatgggaaaggggagttgttttccaccatgagaaagttaaatttgaccactagattaagtaatgaacaca-tttttatcatagactct 30809455  T
Q  512 caacacca 519  Q
    ||||||||    
T  30809454 caacacca 30809447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 32429282 - 32429345
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||||||| | | || ||||||||||| ||||||||||||||| |||||| ||||    
T  32429282 aaggggtgttttctctcatttgaagagtcatataatgcactataaatgcttggcatttgtgcat 32429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 521
Target Start/End: Original strand, 53664242 - 53664320
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||||||  ||| |||| |||| |||||| ||||||||||   ||||||||||||||||||||| ||||    
T  53664242 tttcccaccatgggaaagtaaatattgaccattagataaaatagagaacat-ggttttatcatagacactcaacatcaaa 53664320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 232097 - 232031
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||||||||||| |||||||| ||||||| ||||||| |||| |||||| ||| ||| |||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagat 232031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 34602060 - 34602121
Alignment:
Q  107 aacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtga 168  Q
    ||||||||||| |  |||||| ||||||||||||||||||||||| ||| |||||| |||||    
T  34602060 aacacaattctccctcattcttttactctaaatcatccatcaattttcttatgcatgagtga 34602121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 521
Target Start/End: Original strand, 50709723 - 50709767
Alignment:
Q  476 gataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  50709723 gataaagtagagaacatag-ttttatcatagacactcaacaccaaa 50709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 231443 - 231483
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  231443 tttagtatgggaaagggaagttgttttctaccatgggaaag 231483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 3409597 - 3409673
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca 90  Q
    |||| |||||||||||| ||| ||  |||||||||| ||||||||||  |||||||||||||||  |||| ||||||    
T  3409597 aaggagtgttttctctcatgtgaagggtcatataatgcactataaatatttgacatttgggcattaatttagacaca 3409673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 25970113 - 25970153
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  25970113 tttagcatgggaaaggggagttgtttcccaccatgggaaag 25970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 54006735 - 54006775
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  54006735 tttagtatgggaatgggaagttgtttcccatcatgggaaag 54006775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 3424699 - 3424762
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||||||| ||| ||  |||||||||| ||||||||||  |||| ||||||||||    
T  3424699 aaggggtgttttctctcatgtgaagggtcatataatgcactataaatatttgatatttgggcat 3424762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 36450728 - 36450775
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||| ||||||||||| |||||||| ||||||||||||||    
T  36450728 ggtggtatttagcatgggaaaggggagttgttttccaccatgggaaag 36450775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 47376852 - 47376899
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaag 47376899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 47377646 - 47377599
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||| |||||| | |||||||||| |||||||||||||||||||||||    
T  47377646 ggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaag 47377599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 6680383 - 6680286
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacac 517  Q
    ||||| |||||||||||||   ||||| |||||||||||||  ||| |||| |||| ||| ||||| ||||||||  ||||||||||||  ||||||||    
T  6680383 tttagcatgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacata-gttttatcatagattctcaacac 6680286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 17512254 - 17512185
Alignment:
Q  341 ggtggggtttagcatgggaaatgga-agttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    |||||||||||||||| ||| |||| |||| |||||||||||| |||||| ||| |||| |||||||||||    
T  17512254 ggtggggtttagcatgagaa-tggatagttgtttcccatcatgggaaagtaaattttagtcattagattaa 17512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 34279507 - 34279565
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||| ||| ||  |||||||||| ||||||||||||| |||||||| ||||    
T  34279507 gtgttttctctcatgtgaagggtcatataatgcactataaatgctcgacatttgagcat 34279565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 45330564 - 45330622
Alignment:
Q  411 gggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttga 469  Q
    |||||| |||||  ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  45330564 gggtggaatttaaaatgggaaaggggagttgtttcccaccatggaaaagttaaatttga 45330622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Complemental strand, 47326824 - 47326790
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||| ||||||||||||||||||||||||    
T  47326824 atgggaaaggaaagttgtttcccaccatgggaaag 47326790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Complemental strand, 47341620 - 47341586
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||| ||||||||||||||||||||||||    
T  47341620 atgggaaaggaaagttgtttcccaccatgggaaag 47341586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 54453094 - 54453136
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatg 382  Q
    |||||||||||||||||||||  ||||||| ||||||||||||    
T  54453094 aggtggggtttagcatgggaatgggaagttgtttcccatcatg 54453136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 18671042 - 18670969
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcatcgatttggacaca 90  Q
    ||||| |||||||| ||| ||  ||||||||||  |||||||||||||| |||||||| ||  |||||||||||    
T  18671042 gggtgctttctctcatgtgaagggtcatataatggactataaatgcttggcatttgggaattaatttggacaca 18670969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 25618315 - 25618352
Alignment:
Q  40 gtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  25618315 gtcatataatgcactataaatgcttggcatttgggcat 25618352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 25970106 - 25970155
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagtt 390  Q
    ||||||||||||||||||||| || |||| ||||||| |||| |||||||    
T  25970106 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagtt 25970155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 467
Target Start/End: Original strand, 23383317 - 23383365
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaatttt 467  Q
    ||||| ||| ||||||  ||||||||||||||||||||||| |||||||    
T  23383317 tttagaatgagaaaggagagttgtttcccaccatgggaaagttaatttt 23383365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 461
Target Start/End: Original strand, 25370507 - 25370555
Alignment:
Q  413 gtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagct 461  Q
    |||||||||| | |||||||||  |||| ||||||||||||||||||||    
T  25370507 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 25370555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 30019839 - 30019899
Alignment:
Q  17 gggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||| |||||||| ||| ||  |||||||||| ||||||||||| ||| |||||||||||    
T  30019839 gggtgctttctctcatgtgaagggtcatataatgcactataaatgtttggcatttgggcat 30019899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 32449315 - 32449359
Alignment:
Q  410 agggtggcatttagtatgggaaagggaagttgtttcccaccatgg 454  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||    
T  32449315 agggtgggatttagtatgggaaaggatacttgtttcccaccatgg 32449359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 41261129 - 41261169
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  41261129 tttagcatgggaaaggaaagttgttttccaccatgggaaag 41261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 521
Target Start/End: Complemental strand, 53665069 - 53665026
Alignment:
Q  477 ataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  53665069 ataaagtagagaacatgg-ttttatcatagacactcaacaccaaa 53665026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 54008495 - 54008455
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||| |||||||||||||| | ||||||||||    
T  54008495 tttagtatgggaatgggaagttgtttccaatcatgggaaag 54008455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 1e-67; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 80 - 306
Target Start/End: Original strand, 17720614 - 17720840
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||    
T  17720614 atttggacagaattttgttacattaacaacataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaac 17720713  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  17720714 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 17720813  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||| ||||||||    
T  17720814 tattgcatccaatatacatttattggt 17720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 80 - 306
Target Start/End: Complemental strand, 45120502 - 45120276
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||| ||||||| ||||||||  ||| ||    
T  45120502 atttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctccaatgcatgagtgaattgctggaac 45120403  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  45120402 cataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 45120303  T
Q  280 tattgcatccaatatacagttattggt 306  Q
    |||||||||||||||||| ||||||||    
T  45120302 tattgcatccaatatacatttattggt 45120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 82 - 306
Target Start/End: Original strand, 14917472 - 14917696
Alignment:
Q  82 ttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacca 181  Q
    ||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  14917472 ttggacagaattttgttacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacca 14917571  T
Q  182 taaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattccta 281  Q
    ||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||||||| |||    
T  14917572 taaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttcta 14917671  T
Q  282 ttgcatccaatatacagttattggt 306  Q
    |||||||||||||||| ||||||||    
T  14917672 ttgcatccaatatacatttattggt 14917696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 80 - 337
Target Start/End: Original strand, 30283529 - 30283785
Alignment:
Q  80 atttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtac 179  Q
    ||||||||| ||||||||||||||||||||| |||||| |  | |||| ||||||||||||||| |||||||||||||||||| ||||||||  | | ||    
T  30283529 atttggacagaattttgttacattaacaacataattctccatccttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctagaac 30283628  T
Q  180 cataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcc 279  Q
    ||||||||||||||||| | ||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||    
T  30283629 cataaatctgtaaaatactattaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc 30283728  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||| ||||||||  ||| |||||| |||||||| |||||||||    
T  30283729 tattgcatccaatatacatttattggt-gggggcgaatcgaacttaaaggttagtgtg 30283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 81 - 337
Target Start/End: Complemental strand, 42780298 - 42780043
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacc 180  Q
    |||||||| ||||||||||||||| | ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  42780298 tttggacagaattttgttacatta-ctacataattcttcaccattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaacc 42780200  T
Q  181 ataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattc-c 279  Q
    |||||| ||||||||| ||||| || |||| ||||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||||||||      
T  42780199 ataaatttgtaaaatactgttaggagatacatttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcgt 42780100  T
Q  280 tattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||||||||||||  ||| |||||| ||| |||| |||||||||    
T  42780099 tattgcatccaatatacagttattggt-gggggcgaatcgaacctaaaggttagtgtg 42780043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 337
Target Start/End: Complemental strand, 16284544 - 16284296
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaa-tcatccatcaattctctaatgcattagtgaattattggtaccataaatct 188  Q
    ||||||||| ||||||||| | |||||| |  |||||| |||||||||| |||| |||||| |||||||||||| ||||||||  ||  ||||||||||     
T  16284544 aattttgttgcattaacaatataattctccctcattctcttactctaaaatcattcatcaactctctaatgcatgagtgaattgctgaaaccataaatca 16284445  T
Q  189 gtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaa-ggaatttgttggtcattcctattgcat 287  Q
    ||||||||   ||| || ||||| |||||||| || | |||||||| |||| ||||||||| |||| ||||| || ||| | ||||||||||||||||||    
T  16284444 gtaaaataccattaggagatacgcttggtgtggttgtacaatacacgtcaaggaactcatagtatcctgaaaggggattcgctggtcattcctattgcat 16284345  T
Q  288 ccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    |||||||||||||||||||  ||| |||||| ||| |||||| |||||||    
T  16284344 ccaatatacagttattggt-gggggcgaatcgaacctaaaaggtagtgtg 16284296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 412 - 516
Target Start/End: Original strand, 4975696 - 4975799
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||| ||||||||||||| |||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattaaataaagtagagaacata-cttttatcatagagact 4975794  T
Q  512 caaca 516  Q
    |||||    
T  4975795 caaca 4975799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 716361 - 716230
Alignment:
Q  102 ttaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctgtaaaataatgtt 201  Q
    ||||||||| |||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||||||||||||  |||    
T  716361 ttaacaacataattctccttcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccctaaatctgtaaaatacagtt 716262  T
Q  202 aagaaatacgtttggtgtgattttgcaataca 233  Q
    | || |||||||||||||| || | |||||||    
T  716261 aggagatacgtttggtgtggttgtacaataca 716230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 516
Target Start/End: Original strand, 4993604 - 4993707
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||| ||||||||||||| |||    
T  4993604 ggtggcgtttagtatgggaatgggaagttgttttccaccatggaaaagctaattttgaccattaaataaagtagagaacata-cttttatcatagagact 4993702  T
Q  512 caaca 516  Q
    |||||    
T  4993703 caaca 4993707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 4976546 - 4976445
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||||| | | ||||||||||||||| ||||||||| ||||||| | |||| |||||| ||||||||||| |||||| |||||||||||||||||    
T  4976546 tttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacata-cttttaccatagacactcaacacc 4976448  T
Q  519 aaa 521  Q
    |||    
T  4976447 aaa 4976445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 4994453 - 4994352
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||||| | | ||||||||||||||| ||||||||| ||||||| | |||| |||||| ||||||||||| |||||| |||||||||||||||||    
T  4994453 tttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacata-cttttaccatagacactcaacacc 4994355  T
Q  519 aaa 521  Q
    |||    
T  4994354 aaa 4994352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 41519966 - 41519865
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    |||||||||||||||||||||| |||||||||||||||||| |  |||||| | ||  ||||||||||||||||| |||||| ||||||||| |||||||    
T  41519966 tttagtatgggaaagggaagttttttcccaccatgggaaagttttttttgaccgttaaataaagtagagaacata-cttttaccatagacacccaacacc 41519868  T
Q  519 aaa 521  Q
    |||    
T  41519867 aaa 41519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 519
Target Start/End: Original strand, 37545676 - 37545782
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||||||||  || |||||||||||||||||||||||||||||||| ||| ||||| |||| ||| |||||  ||||| |  | ||||||||||||||    
T  37545676 ggtggcatttaaaataggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacaca-ttcttatcatagacact 37545774  T
Q  512 caacacca 519  Q
    ||||||||    
T  37545775 caacacca 37545782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 42370991 - 42370890
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    ||||||||||||| || ||||||||||||||||||||||||  ||| |||  |||| |||||||| ||||| |||  ||||||||||||||||| |||||    
T  42370991 tttagtatgggaatggaaagttgtttcccaccatgggaaagtaaatattggccattagataaagtggagaatata-gttttatcatagacactcgacacc 42370893  T
Q  519 aaa 521  Q
    |||    
T  42370892 aaa 42370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 20892343 - 20892401
Alignment:
Q  19 gtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||    
T  20892343 gtgttttctctcgtgtgaagagtcatataatgcactataaatacttgacatttgggcat 20892401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 521
Target Start/End: Original strand, 42369650 - 42369751
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacacc 518  Q
    |||||||||| ||||| ||||||||||   |||||||||||  ||| ||   |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  42369650 tttagtatggaaaaggaaagttgtttcaatccatgggaaagtaaatattagccattagataaagtagagaacataa-ttttatcatagacactcaacacc 42369748  T
Q  519 aaa 521  Q
    |||    
T  42369749 aaa 42369751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 14917377 - 14917434
Alignment:
Q  20 tgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  14917377 tgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 14917434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 17720519 - 17720578
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  17720519 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 17720578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 36390956 - 36391023
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 407  Q
    |||||||||||||||||||||| ||||||| ||||||| |||| |||||| ||| ||| |||||||||    
T  36390956 aggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagat 36391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 36719070 - 36719015
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaatttt 467  Q
    ||||||||||||||||||||||| || |||||||| ||||| ||||||||||||||    
T  36719070 ggtggcatttagtatgggaaaggaaacttgtttcctaccataggaaagctaatttt 36719015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 42780388 - 42780325
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||||||| ||| || ||||||||||| ||||||||||| |||||| ||||||||    
T  42780388 aaggggtgttttctctcatgtgaagagtcatataatgcactataaatgattgacagttgggcat 42780325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 45120598 - 45120539
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  45120598 ggtgctttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 45120539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 36390964 - 36391004
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  36390964 tttagcatgggaaagggaagttgtttcccaccatgggaaag 36391004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 39196121 - 39196216
Alignment:
Q  241 gaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||| |||| |||| || ||| |  ||||||||||||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  39196121 gaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 39196216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 521
Target Start/End: Complemental strand, 8536904 - 8536826
Alignment:
Q  442 tttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||| ||||||| ||||  ||| |||| |||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  8536904 tttcctaccatggaaaagtaaatgttgaccattagataaagtagagaacatgg-ttttatcatagacactcaacaccaaa 8536826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 30283439 - 30283502
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    |||||||||||||| || ||| || ||||||||||| ||||||||||| ||| |||||||||||    
T  30283439 aaggggtgttttctttcatgtgaagagtcatataatgcactataaatgtttggcatttgggcat 30283502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 491
Target Start/End: Complemental strand, 41768791 - 41768712
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaaca 491  Q
    |||||||||||| |||||  || |||||||||||||||||||||||||  |||||||| |||| ||| | ||| ||||||    
T  41768791 ggtggcatttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 41768712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 24383104 - 24383063
Alignment:
Q  419 tttagtatgggaaagggaagttgttt-cccaccatgggaaag 459  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  24383104 tttagtatgggaaagggaagttgtttccccaccatgggaaag 24383063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 37546612 - 37546555
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttga 469  Q
    |||||||||||  ||||||||||| |||||||||||| |||||||||| ||| |||||    
T  37546612 ggtggcatttaaaatgggaaaggggagttgtttcccatcatgggaaagttaaatttga 37546555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 460
Target Start/End: Original strand, 5005462 - 5005510
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagc 460  Q
    |||||||||||| ||||||||||| | |||||||||| |||||||||||    
T  5005462 ggtggcatttagcatgggaaaggggaattgtttcccatcatgggaaagc 5005510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 23876112 - 23876064
Alignment:
Q  340 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaag 388  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| |||||    
T  23876112 aggtggggtttagcatgggaaatgggagttgtttcccaccatgggaaag 23876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 36391713 - 36391673
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  36391713 tttagtatgggaaaggggagttgttttccaccatgggaaag 36391673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 7868189 - 7868142
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||| ||| ||||||| |||||||||||||||||||||||    
T  7868189 ggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaag 7868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 8536171 - 8536245
Alignment:
Q  446 ccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacactcaacaccaaa 521  Q
    ||||||||||||||  ||| ||||  ||| |||||||||||||||||   ||||||||||||||||||||| ||||    
T  8536171 ccaccatgggaaagtaaatattgacgattagataaagtagagaacat-gattttatcatagacactcaacatcaaa 8536245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Complemental strand, 15602861 - 15602822
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaa 458  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  15602861 tttagcataggaaagggaagttgtttcccaccatgggaaa 15602822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 30544741 - 30544796
Alignment:
Q  355 tgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    ||||||||||||||| |||||||| ||| ||||||| || ||||||||| ||||||    
T  30544741 tgggaaatggaagttgtttcccatgatgggaaagttgattttagccatttgattaa 30544796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 4386232 - 4386202
Alignment:
Q  436 aagttgtttcccaccatgggaaagctaattt 466  Q
    |||||||||||||||||||||||||||||||    
T  4386232 aagttgtttcccaccatgggaaagctaattt 4386202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 2307114 - 2307074
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||||||||||||||||| |||||||| |||||    
T  2307114 tttagcatgggaaagggaagttgttttccaccatgagaaag 2307074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 23876104 - 23876064
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  23876104 tttagcatgggaaatgggagttgtttcccaccatgggaaag 23876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 30486982 - 30486942
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  30486982 tttagtatgggtaagtgaagttttttcccaccatgggaaag 30486942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 483
Target Start/End: Original strand, 34617660 - 34617724
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagt 483  Q
    ||||| ||||||||||  | ||||||||||||||||||||| || |||||| |||| ||| ||||    
T  34617660 tttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagattaagt 34617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 44094865 - 44094825
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccat 452  Q
    ||||| |||||| |||||||||| |||||||||||||||||    
T  44094865 ggtgggatttagcatgggaaaggaaagttgtttcccaccat 44094825  T

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Target: scaffold0223 (Bit Score: 121; Significance: 1e-61; HSPs: 3)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 82 - 306
Target Start/End: Original strand, 2109 - 2333
Alignment:
Q  82 ttggacacaattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtacca 181  Q
    ||||||| |||||| |||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  2109 ttggacagaattttattacattaacaacataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaacca 2208  T
Q  182 taaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattccta 281  Q
    ||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  |||||||||||    
T  2209 taaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccta 2308  T
Q  282 ttgcatccaatatacagttattggt 306  Q
    |||||||||||||||| ||||||||    
T  2309 ttgcatccaatatacatttattggt 2333  T

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Target: scaffold0223; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 2012 - 2071
Alignment:
Q  18 ggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatttgggcat 77  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  2012 ggtgttttctctcatgtgaagagtcatataatgcactataaatgcttgacatttgggcat 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 7256 - 7321
Alignment:
Q  271 ggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||||||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||||    
T  7256 ggtcattcctattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtgtg 7321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 81 - 337
Target Start/End: Complemental strand, 144213 - 143956
Alignment:
Q  81 tttggacacaattttgttacattaacaacacaattcttctccattctattactct--aaatcatccatcaattctctaatgcattagtgaattattggta 178  Q
    |||||| | ||||||||| ||||||||||| |||||| |  |||||| || ||||  ||||||||||| ||||||||||||||| ||||||||  ||  |    
T  144213 tttggatagaattttgttgcattaacaacataattctccctcattctcttgctctctaaatcatccattaattctctaatgcatgagtgaattgctgaaa 144114  T
Q  179 ccataaatctgtaaaataatgttaagaaatacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattc 278  Q
    |||||||||||||||||| ||||| || ||||| |||||||| || |||||||||| |||| ||||||||| |||| |||| || ||| |  ||| | ||    
T  144113 ccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtaactc 144014  T
Q  279 ctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtgtg 337  Q
    ||||||||||||||||||||||||||||  ||| |||||| ||| |||| |||||||||    
T  144013 ctattgcatccaatatacagttattggt-gggggcgaatcgaacctaaaggttagtgtg 143956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 144285 - 144229
Alignment:
Q  14 aaggggtgttttctctcgtgttaatagtcatataatacactataaatgcttgacatt 70  Q
    ||||||||||||||||| ||| ||  |||||||||| |||||||||| |||| ||||    
T  144285 aaggggtgttttctctcatgtgaagggtcatataatgcactataaatacttggcatt 144229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 12912 - 12757
Alignment:
Q  407 ttaagggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatag 506  Q
    |||| |||||| |||| | |||| ||| ||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||| ||||||||||||    
T  12912 ttaatggtggcgtttaatttggggaagtgaagttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacata-cttttatcatag 12814  T
Q  507 acactcaacaccaaacnnnnnnnccatattggcccaccacttgcagctgtcccaactc 564  Q
    |||||||||||| |         |||||||||||||||||||||||||| ||||||||    
T  12813 acactcaacacc-atttttttttccatattggcccaccacttgcagctgccccaactc 12757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 516
Target Start/End: Original strand, 12184 - 12287
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatagacact 511  Q
    |||||| |||| | |||||||| ||||||||||||||||||| ||||  ||||||||| | || ||| || |||||||||||  ||||||||||||||||    
T  12184 ggtggcgtttaatttgggaaagagaagttgtttcccaccatgagaaaattaattttgaccgttagattaaatagagaacata-tttttatcatagacact 12282  T
Q  512 caaca 516  Q
    |||||    
T  12283 caaca 12287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 173464 - 173352
Alignment:
Q  90 aattttgttacattaacaacacaattcttctccattctattactctaaatcatccatcaattctctaatgcattagtgaattattggtaccataaatctg 189  Q
    ||||||||||||| ||||||| ||||||||   ||||| ||||||||||||||||||||||||||||||| ||  |||||||  ||| |||||||||||     
T  173464 aattttgttacatcaacaacataattcttcctaattctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctc 173365  T
Q  190 taaaataatgtta 202  Q
    ||||||| |||||    
T  173364 taaaatactgtta 173352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 170807 - 170711
Alignment:
Q  207 atacgtttggtgtgattttgcaatacacatcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttatt 303  Q
    ||||| |||||||| || |||||||||||| || ||||||||| |||| | || || ||| |  |||||||||||||||||||||||||||||||||    
T  170807 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttatt 170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 16567 - 16467
Alignment:
Q  236 tcaatgaactcataatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacttaaaagttagtg 335  Q
    |||| ||||||||| |||| |||| || ||| |  ||||||||||||||||||||||||||| ||||||||  ||| |||||| ||| |||| |||||||    
T  16567 tcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggt-gggggcgaatcgaacctaaaggttagtg 16469  T
Q  336 tg 337  Q
    ||    
T  16468 tg 16467  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 14012 - 14054
Alignment:
Q  412 ggtggcatttagtatgggaaagggaagttgtttcccaccatgg 454  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||    
T  14012 ggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 43266 - 43197
Alignment:
Q  341 ggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagattaa 410  Q
    |||||||||||| |||| ||| || |||| |||||||||||| |||||| ||| ||| |||||| |||||    
T  43266 ggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaagtaaatcttaaccattaaattaa 43197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 43259 - 43219
Alignment:
Q  419 tttagtatgggaaagggaagttgtttcccaccatgggaaag 459  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  43259 tttagtatggaaaaggggagttgtttcccatcatgggaaag 43219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 11952 - 11873
Alignment:
Q  425 atgggaaagggaagttgtttcccaccatgggaaagctaattttgaacattggataaagtagagaacataccttttatcatag 506  Q
    |||||||||||||   |||||| |||||||||||| |||| |||| |||| ||| ||||||||||||||  |||||||||||    
T  11952 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacata-tttttatcatag 11873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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