View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6899_low_37 (Length: 222)
Name: NF6899_low_37
Description: NF6899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6899_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 27967123 - 27967335
Alignment:
| Q |
1 |
gcaatttaacatcgtgcagatcatgctggaatcaataataggtatcctgtggtccttaggaagatgaggaaaacagtaagatagaaatatcccatccaaa |
100 |
Q |
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| T |
27967123 |
gcaatttaacatcgtgcagatcatgctggaatcaataataggtatcctgtggtccttaggaagatgaggaaaacagtaagatagaaatatcccatccaaa |
27967222 |
T |
|
| Q |
101 |
aatatcatcaagaatggacaaatataaatgacgaaggattggcaatgaaatatggcacactgttgagacaatgttttaagccgtataaacaatgcaagtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
27967223 |
aatatcatcaagaatggacaaatataaatgacgaaggattggcaatgaaatatggcacactgttgagacaatgttttcagccgtataaacaatgcaagtt |
27967322 |
T |
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| Q |
201 |
aattgatgtccat |
213 |
Q |
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||||||||||||| |
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| T |
27967323 |
aattgatgtccat |
27967335 |
T |
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