View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6900_high_1 (Length: 744)

Name: NF6900_high_1
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6900_high_1
NF6900_high_1
[»] chr2 (52 HSPs)
chr2 (72-673)||(19539104-19539706)
chr2 (17-130)||(24851463-24851577)
chr2 (17-130)||(22455750-22455865)
chr2 (17-131)||(39038431-39038546)
chr2 (17-130)||(28702015-28702129)
chr2 (14-128)||(20569537-20569652)
chr2 (17-119)||(25188609-25188711)
chr2 (17-130)||(40780504-40780618)
chr2 (17-130)||(45087788-45087902)
chr2 (14-130)||(24575226-24575344)
chr2 (14-130)||(17964091-17964208)
chr2 (17-130)||(22188898-22189013)
chr2 (17-130)||(24778525-24778640)
chr2 (14-130)||(22257383-22257501)
chr2 (17-131)||(28551712-28551826)
chr2 (17-130)||(6391861-6391975)
chr2 (19-133)||(41122473-41122586)
chr2 (17-131)||(21537978-21538093)
chr2 (17-130)||(1587825-1587938)
chr2 (19-77)||(6574957-6575015)
chr2 (21-87)||(13964778-13964844)
chr2 (17-126)||(10010541-10010649)
chr2 (17-130)||(27294685-27294800)
chr2 (17-88)||(28712497-28712568)
chr2 (17-120)||(38780602-38780705)
chr2 (22-88)||(20152790-20152856)
chr2 (17-87)||(23234192-23234262)
chr2 (17-107)||(23185123-23185211)
chr2 (17-107)||(23596386-23596474)
chr2 (14-127)||(25828352-25828466)
chr2 (17-130)||(31328765-31328878)
chr2 (17-130)||(31335486-31335599)
chr2 (17-107)||(31801676-31801766)
chr2 (23-130)||(22782429-22782536)
chr2 (23-130)||(22786453-22786562)
chr2 (17-134)||(16494537-16494655)
chr2 (60-132)||(24376310-24376384)
chr2 (21-133)||(22316794-22316898)
chr2 (17-77)||(22801723-22801783)
chr2 (24-128)||(31968574-31968677)
chr2 (27-107)||(38630968-38631048)
chr2 (24-108)||(44839651-44839734)
chr2 (18-130)||(22271293-22271401)
chr2 (18-120)||(40330995-40331096)
chr2 (17-88)||(24724099-24724168)
chr2 (80-130)||(22682642-22682693)
chr2 (17-104)||(34322720-34322806)
chr2 (82-130)||(28790128-28790176)
chr2 (17-87)||(26623262-26623330)
chr2 (33-107)||(18377031-18377104)
chr2 (19-52)||(26367200-26367233)
chr2 (18-51)||(40331388-40331421)
[»] chr7 (73 HSPs)
chr7 (17-134)||(4493735-4493853)
chr7 (17-133)||(2499220-2499337)
chr7 (17-133)||(11792062-11792179)
chr7 (17-134)||(21284223-21284341)
chr7 (17-130)||(14186880-14186995)
chr7 (17-130)||(13027800-13027914)
chr7 (17-130)||(21691617-21691733)
chr7 (17-129)||(41843271-41843384)
chr7 (19-107)||(35954762-35954850)
chr7 (24-130)||(16557466-16557573)
chr7 (24-130)||(16608089-16608196)
chr7 (17-107)||(16546186-16546276)
chr7 (17-107)||(16619386-16619476)
chr7 (17-130)||(13034702-13034818)
chr7 (17-134)||(13473336-13473452)
chr7 (14-132)||(16315383-16315503)
chr7 (19-130)||(10884021-10884133)
chr7 (17-130)||(13138774-13138889)
chr7 (17-105)||(28623202-28623290)
chr7 (17-108)||(19328859-19328950)
chr7 (17-130)||(33692571-33692686)
chr7 (17-107)||(12367606-12367696)
chr7 (17-134)||(13261524-13261642)
chr7 (17-107)||(13879362-13879452)
chr7 (17-107)||(14424526-14424616)
chr7 (17-107)||(15467134-15467224)
chr7 (17-130)||(33604099-33604213)
chr7 (20-106)||(48237687-48237773)
chr7 (14-107)||(13731522-13731615)
chr7 (17-132)||(15087743-15087862)
chr7 (17-130)||(30025128-30025243)
chr7 (17-134)||(13259292-13259410)
chr7 (14-107)||(13645670-13645763)
chr7 (17-135)||(9710683-9710802)
chr7 (19-106)||(13302081-13302168)
chr7 (17-107)||(22580103-22580193)
chr7 (13-107)||(24787579-24787672)
chr7 (17-130)||(8182153-8182265)
chr7 (23-132)||(48063666-48063774)
chr7 (27-136)||(1292241-1292351)
chr7 (17-130)||(5001711-5001826)
chr7 (17-120)||(15705343-15705446)
chr7 (14-102)||(2914502-2914589)
chr7 (17-130)||(32265559-32265673)
chr7 (14-130)||(11318589-11318707)
chr7 (17-88)||(16317445-16317516)
chr7 (17-107)||(23280824-23280915)
chr7 (17-107)||(4820705-4820794)
chr7 (17-131)||(12175183-12175297)
chr7 (13-86)||(9069000-9069073)
chr7 (14-87)||(13681534-13681607)
chr7 (17-88)||(29936194-29936265)
chr7 (17-107)||(15574457-15574546)
chr7 (19-77)||(16155591-16155649)
chr7 (17-131)||(39285390-39285504)
chr7 (24-130)||(48806736-48806846)
chr7 (80-132)||(3779534-3779586)
chr7 (17-105)||(16310804-16310892)
chr7 (17-77)||(30946255-30946315)
chr7 (17-60)||(4832173-4832216)
chr7 (17-130)||(19237910-19238022)
chr7 (24-105)||(33420976-33421056)
chr7 (17-131)||(13902504-13902617)
chr7 (83-131)||(22727224-22727272)
chr7 (17-107)||(27870937-27871026)
chr7 (17-130)||(21211427-21211542)
chr7 (17-129)||(44466276-44466389)
chr7 (17-88)||(16911731-16911797)
chr7 (79-129)||(9802280-9802330)
chr7 (24-86)||(14424755-14424816)
chr7 (81-130)||(4412881-4412930)
chr7 (81-130)||(8932954-8933003)
chr7 (96-129)||(9761036-9761069)
[»] chr4 (48 HSPs)
chr4 (17-130)||(44397403-44397516)
chr4 (17-130)||(22676362-22676475)
chr4 (17-130)||(3792527-3792640)
chr4 (19-130)||(12599948-12600060)
chr4 (17-130)||(24628699-24628814)
chr4 (17-130)||(29120560-29120675)
chr4 (17-126)||(54679058-54679168)
chr4 (17-130)||(14905127-14905242)
chr4 (17-108)||(23749742-23749833)
chr4 (17-139)||(14605707-14605832)
chr4 (17-136)||(10071687-10071811)
chr4 (17-87)||(17246847-17246917)
chr4 (17-128)||(56033722-56033835)
chr4 (13-130)||(29681315-29681432)
chr4 (17-120)||(55379515-55379619)
chr4 (17-132)||(3106218-3106331)
chr4 (17-130)||(22089478-22089589)
chr4 (14-130)||(19611171-19611288)
chr4 (17-136)||(10072073-10072197)
chr4 (17-135)||(13576950-13577069)
chr4 (17-130)||(37436332-37436445)
chr4 (17-131)||(17399482-17399597)
chr4 (14-130)||(23120732-23120848)
chr4 (19-130)||(41115618-41115728)
chr4 (17-127)||(15134915-15135026)
chr4 (17-107)||(19883910-19884000)
chr4 (14-130)||(16631631-16631749)
chr4 (17-107)||(6516702-6516791)
chr4 (34-130)||(11914864-11914959)
chr4 (17-107)||(19621792-19621882)
chr4 (14-104)||(19665587-19665676)
chr4 (14-107)||(36470134-36470227)
chr4 (22-106)||(37986420-37986504)
chr4 (17-130)||(15560463-15560577)
chr4 (17-108)||(11900324-11900413)
chr4 (17-130)||(22190038-22190153)
chr4 (24-120)||(38513116-38513215)
chr4 (17-108)||(8686244-8686333)
chr4 (24-133)||(20976643-20976756)
chr4 (83-134)||(13929818-13929869)
chr4 (17-88)||(16852709-16852779)
chr4 (68-130)||(40859900-40859963)
chr4 (17-132)||(3500455-3500571)
chr4 (24-54)||(9752351-9752381)
chr4 (22-83)||(3394889-3394950)
chr4 (74-130)||(17527237-17527294)
chr4 (82-130)||(21810746-21810795)
chr4 (17-70)||(55731084-55731137)
[»] scaffold0210 (1 HSPs)
scaffold0210 (17-130)||(817-932)
[»] scaffold0023 (1 HSPs)
scaffold0023 (17-129)||(102752-102866)
[»] scaffold0315 (1 HSPs)
scaffold0315 (21-130)||(7866-7976)
[»] chr8 (47 HSPs)
chr8 (17-130)||(45539331-45539445)
chr8 (17-131)||(25163260-25163375)
chr8 (17-130)||(30422277-30422391)
chr8 (14-130)||(17541333-17541450)
chr8 (17-130)||(9319761-9319876)
chr8 (17-107)||(17796631-17796721)
chr8 (17-88)||(16206464-16206535)
chr8 (18-120)||(18121980-18122083)
chr8 (17-130)||(19942426-19942539)
chr8 (17-107)||(23264474-23264564)
chr8 (14-130)||(17007500-17007617)
chr8 (17-130)||(22672968-22673080)
chr8 (17-128)||(23185593-23185703)
chr8 (14-120)||(36104545-36104651)
chr8 (17-130)||(31445292-31445406)
chr8 (14-107)||(19153238-19153331)
chr8 (17-131)||(43644072-43644185)
chr8 (14-107)||(12758586-12758679)
chr8 (17-128)||(18771889-18771997)
chr8 (27-134)||(6406947-6407054)
chr8 (17-130)||(14990935-14991049)
chr8 (17-108)||(15336934-15337024)
chr8 (17-108)||(15425999-15426089)
chr8 (17-108)||(15517303-15517393)
chr8 (17-107)||(19706727-19706815)
chr8 (17-99)||(21932097-21932180)
chr8 (17-132)||(13431465-13431581)
chr8 (17-135)||(20383197-20383317)
chr8 (19-104)||(39692758-39692843)
chr8 (17-77)||(17442694-17442754)
chr8 (52-130)||(18676847-18676926)
chr8 (14-88)||(16682097-16682171)
chr8 (17-106)||(22662287-22662375)
chr8 (13-69)||(29692564-29692620)
chr8 (17-77)||(35028324-35028384)
chr8 (17-130)||(45292033-45292150)
chr8 (29-130)||(40846262-40846365)
chr8 (35-107)||(16188484-16188556)
chr8 (24-130)||(43773308-43773417)
chr8 (14-64)||(20256356-20256406)
chr8 (14-64)||(20256441-20256491)
chr8 (17-52)||(18152550-18152585)
chr8 (79-130)||(27739070-27739121)
chr8 (24-54)||(33561068-33561098)
chr8 (23-77)||(43638999-43639052)
chr8 (74-130)||(1210604-1210661)
chr8 (81-130)||(9767963-9768012)
[»] chr3 (68 HSPs)
chr3 (17-130)||(6089925-6090039)
chr3 (17-130)||(52282991-52283106)
chr3 (17-130)||(12727082-12727196)
chr3 (17-130)||(14954607-14954721)
chr3 (17-107)||(29952283-29952373)
chr3 (17-107)||(30001437-30001527)
chr3 (17-130)||(40799085-40799201)
chr3 (17-134)||(52919618-52919735)
chr3 (14-130)||(15902393-15902509)
chr3 (17-130)||(1241921-1242035)
chr3 (17-107)||(20628308-20628398)
chr3 (17-106)||(14968591-14968680)
chr3 (14-130)||(19889782-19889899)
chr3 (17-133)||(49554356-49554473)
chr3 (17-120)||(38178491-38178595)
chr3 (17-132)||(14393841-14393958)
chr3 (17-130)||(19885924-19886038)
chr3 (17-129)||(2560383-2560496)
chr3 (17-130)||(11189191-11189304)
chr3 (17-120)||(11222753-11222859)
chr3 (17-130)||(29854607-29854721)
chr3 (22-130)||(17667566-17667676)
chr3 (17-121)||(17239775-17239880)
chr3 (17-130)||(22804867-22804980)
chr3 (18-134)||(41494196-41494312)
chr3 (19-130)||(12963934-12964046)
chr3 (17-107)||(18122494-18122584)
chr3 (17-130)||(47206869-47206974)
chr3 (14-132)||(49643607-49643727)
chr3 (17-120)||(25399101-25399205)
chr3 (20-119)||(31302557-31302657)
chr3 (17-107)||(11222014-11222107)
chr3 (17-126)||(21639128-21639237)
chr3 (17-130)||(53057571-53057685)
chr3 (19-119)||(13823278-13823379)
chr3 (17-130)||(50299431-50299549)
chr3 (17-130)||(8874971-8875086)
chr3 (17-129)||(47406263-47406366)
chr3 (17-130)||(46797241-46797354)
chr3 (17-129)||(16031701-16031814)
chr3 (17-102)||(46350687-46350772)
chr3 (17-130)||(19250236-19250348)
chr3 (23-130)||(2025293-2025397)
chr3 (23-130)||(21640035-21640143)
chr3 (17-107)||(2782705-2782797)
chr3 (14-107)||(13939117-13939210)
chr3 (17-130)||(40850174-40850289)
chr3 (17-77)||(2783127-2783187)
chr3 (23-87)||(5212807-5212870)
chr3 (59-130)||(28581292-28581364)
chr3 (17-64)||(24776358-24776405)
chr3 (17-103)||(20645379-20645465)
chr3 (39-107)||(13781454-13781522)
chr3 (79-130)||(16881444-16881495)
chr3 (17-107)||(26418569-26418657)
chr3 (17-107)||(30055022-30055112)
chr3 (17-130)||(33582415-33582530)
chr3 (23-120)||(49669338-49669435)
chr3 (19-130)||(14310877-14310987)
chr3 (67-132)||(22465376-22465441)
chr3 (74-130)||(13698556-13698612)
chr3 (44-130)||(3237891-3237977)
chr3 (44-87)||(16659434-16659477)
chr3 (68-128)||(14063939-14063999)
chr3 (20-134)||(6252603-6252712)
chr3 (17-130)||(23539073-23539185)
chr3 (94-132)||(14006877-14006915)
chr3 (81-130)||(11073624-11073673)
[»] chr6 (49 HSPs)
chr6 (17-131)||(10631330-10631446)
chr6 (17-130)||(14101284-14101398)
chr6 (17-130)||(32543458-32543572)
chr6 (17-131)||(15532470-15532586)
chr6 (17-131)||(17380756-17380872)
chr6 (17-130)||(22801339-22801452)
chr6 (17-130)||(21624286-21624401)
chr6 (17-132)||(15986556-15986671)
chr6 (17-130)||(13435080-13435194)
chr6 (13-130)||(15301413-15301531)
chr6 (17-132)||(21234348-21234465)
chr6 (17-128)||(16528511-16528624)
chr6 (17-107)||(18434729-18434819)
chr6 (18-131)||(19085326-19085440)
chr6 (17-107)||(20113473-20113564)
chr6 (19-107)||(24717659-24717749)
chr6 (14-131)||(13601361-13601479)
chr6 (17-130)||(9717020-9717135)
chr6 (17-101)||(20731546-20731630)
chr6 (17-120)||(16332935-16333038)
chr6 (17-130)||(18377621-18377736)
chr6 (17-130)||(19687928-19688042)
chr6 (17-131)||(19833829-19833943)
chr6 (14-107)||(14732952-14733045)
chr6 (14-131)||(25593268-25593383)
chr6 (17-109)||(21617471-21617562)
chr6 (23-130)||(33353093-33353199)
chr6 (17-107)||(19623206-19623296)
chr6 (17-107)||(17304106-17304194)
chr6 (24-130)||(26588794-26588903)
chr6 (17-100)||(7762866-7762947)
chr6 (17-88)||(24116055-24116127)
chr6 (17-128)||(29917238-29917347)
chr6 (17-130)||(3680299-3680411)
chr6 (17-130)||(12041053-12041170)
chr6 (17-107)||(19469850-19469938)
chr6 (17-130)||(16876107-16876217)
chr6 (25-74)||(19952434-19952483)
chr6 (17-107)||(22077211-22077302)
chr6 (46-128)||(29537817-29537901)
chr6 (17-88)||(12422480-12422550)
chr6 (34-131)||(19624970-19625068)
chr6 (14-87)||(12716283-12716356)
chr6 (17-121)||(19066854-19066960)
chr6 (20-121)||(26941610-26941710)
chr6 (20-58)||(17927012-17927050)
chr6 (74-130)||(24471261-24471318)
chr6 (80-120)||(24481333-24481374)
chr6 (80-128)||(30372574-30372623)
[»] chr5 (40 HSPs)
chr5 (17-132)||(30742133-30742248)
chr5 (17-130)||(6498511-6498623)
chr5 (17-107)||(7746524-7746614)
chr5 (17-130)||(21100578-21100692)
chr5 (17-130)||(13546355-13546470)
chr5 (17-132)||(21076011-21076127)
chr5 (17-130)||(37395362-37395476)
chr5 (16-130)||(9399440-9399556)
chr5 (17-133)||(22000855-22000972)
chr5 (17-130)||(90261-90375)
chr5 (17-107)||(12353691-12353781)
chr5 (17-107)||(31117094-31117184)
chr5 (17-130)||(31487403-31487517)
chr5 (14-131)||(6513255-6513374)
chr5 (17-104)||(13736934-13737021)
chr5 (22-130)||(21199846-21199953)
chr5 (17-87)||(33021898-33021968)
chr5 (17-121)||(23413804-23413910)
chr5 (17-121)||(33932470-33932576)
chr5 (17-130)||(3246291-3246403)
chr5 (17-107)||(11993108-11993197)
chr5 (17-107)||(26764690-26764779)
chr5 (17-131)||(28138788-28138907)
chr5 (17-130)||(35932834-35932949)
chr5 (17-69)||(23880269-23880321)
chr5 (23-107)||(15516187-15516270)
chr5 (17-130)||(30116702-30116816)
chr5 (17-112)||(31146431-31146526)
chr5 (17-77)||(42242856-42242916)
chr5 (24-102)||(10847996-10848073)
chr5 (17-107)||(19546358-19546448)
chr5 (17-128)||(25097871-25097981)
chr5 (17-128)||(25156963-25157073)
chr5 (19-132)||(28465177-28465289)
chr5 (74-130)||(26120704-26120760)
chr5 (13-103)||(17814186-17814276)
chr5 (17-77)||(643525-643585)
chr5 (23-65)||(9088231-9088273)
chr5 (17-107)||(16606700-16606790)
chr5 (24-54)||(35987059-35987089)
[»] scaffold0859 (1 HSPs)
scaffold0859 (17-130)||(2166-2280)
[»] scaffold0205 (1 HSPs)
scaffold0205 (17-130)||(752-866)
[»] chr1 (48 HSPs)
chr1 (17-109)||(1899564-1899656)
chr1 (19-130)||(29214995-29215107)
chr1 (17-130)||(14294052-14294164)
chr1 (17-132)||(38281556-38281672)
chr1 (17-108)||(2833874-2833965)
chr1 (17-131)||(30892259-30892374)
chr1 (17-130)||(1577044-1577158)
chr1 (17-130)||(22153021-22153135)
chr1 (17-103)||(22428108-22428194)
chr1 (17-130)||(25449357-25449469)
chr1 (14-130)||(22202648-22202764)
chr1 (17-91)||(2266321-2266395)
chr1 (19-134)||(12283586-12283700)
chr1 (17-132)||(23037293-23037411)
chr1 (17-107)||(22600956-22601046)
chr1 (17-130)||(32786708-32786822)
chr1 (36-130)||(20959819-20959911)
chr1 (19-130)||(48703447-48703558)
chr1 (17-130)||(22465582-22465696)
chr1 (17-132)||(7308984-7309099)
chr1 (14-121)||(33257135-33257243)
chr1 (14-121)||(33277307-33277415)
chr1 (17-107)||(36133430-36133520)
chr1 (17-130)||(48571022-48571135)
chr1 (17-107)||(14264198-14264286)
chr1 (17-130)||(21983793-21983908)
chr1 (17-131)||(12625318-12625431)
chr1 (19-107)||(28493092-28493180)
chr1 (17-107)||(21205629-21205716)
chr1 (17-107)||(21215444-21215531)
chr1 (17-119)||(44824523-44824625)
chr1 (17-106)||(21135927-21136016)
chr1 (14-88)||(22202526-22202600)
chr1 (23-107)||(19214829-19214913)
chr1 (17-130)||(21192654-21192767)
chr1 (24-120)||(46088198-46088294)
chr1 (17-108)||(30571421-30571511)
chr1 (74-132)||(16233946-16234004)
chr1 (17-105)||(10756654-10756742)
chr1 (17-130)||(17025772-17025884)
chr1 (74-128)||(25398671-25398725)
chr1 (80-130)||(42283840-42283890)
chr1 (17-105)||(18614135-18614221)
chr1 (17-134)||(10250190-10250302)
chr1 (79-131)||(23053576-23053628)
chr1 (24-130)||(37640208-37640313)
chr1 (74-130)||(2820096-2820153)
chr1 (74-130)||(27857981-27858038)
[»] scaffold0479 (1 HSPs)
scaffold0479 (17-108)||(9186-9277)
[»] scaffold0163 (1 HSPs)
scaffold0163 (17-107)||(25649-25739)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-139)||(211546-211671)
[»] scaffold0471 (1 HSPs)
scaffold0471 (14-130)||(2651-2767)
[»] scaffold0439 (1 HSPs)
scaffold0439 (17-120)||(7509-7612)
[»] scaffold1359 (1 HSPs)
scaffold1359 (17-106)||(6-95)
[»] scaffold0146 (1 HSPs)
scaffold0146 (17-121)||(14320-14425)
[»] scaffold0035 (2 HSPs)
scaffold0035 (19-128)||(20267-20376)
scaffold0035 (17-107)||(110392-110481)
[»] scaffold0004 (3 HSPs)
scaffold0004 (17-130)||(210603-210715)
scaffold0004 (19-130)||(219436-219547)
scaffold0004 (14-130)||(378348-378466)
[»] scaffold0530 (1 HSPs)
scaffold0530 (19-107)||(2816-2904)
[»] scaffold0359 (1 HSPs)
scaffold0359 (17-130)||(6524-6639)
[»] scaffold0290 (1 HSPs)
scaffold0290 (17-130)||(19454-19569)
[»] scaffold0028 (2 HSPs)
scaffold0028 (17-131)||(24576-24690)
scaffold0028 (38-120)||(80571-80651)
[»] scaffold0567 (1 HSPs)
scaffold0567 (17-130)||(9098-9209)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-107)||(111400-111490)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-130)||(7076-7193)
[»] scaffold0022 (3 HSPs)
scaffold0022 (19-130)||(36626-36738)
scaffold0022 (19-130)||(134686-134798)
scaffold0022 (17-84)||(158390-158457)
[»] scaffold0161 (2 HSPs)
scaffold0161 (17-107)||(10907-10998)
scaffold0161 (17-107)||(15571-15662)
[»] scaffold0084 (2 HSPs)
scaffold0084 (14-130)||(48512-48630)
scaffold0084 (14-131)||(31785-31903)
[»] scaffold0081 (1 HSPs)
scaffold0081 (17-130)||(13191-13303)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-102)||(83586-83672)
scaffold0009 (46-135)||(83489-83579)
[»] scaffold0045 (1 HSPs)
scaffold0045 (17-132)||(88398-88515)
[»] scaffold0280 (1 HSPs)
scaffold0280 (17-107)||(3483-3572)
[»] scaffold0275 (1 HSPs)
scaffold0275 (17-130)||(23824-23937)
[»] scaffold0138 (1 HSPs)
scaffold0138 (22-107)||(16207-16292)
[»] scaffold0115 (1 HSPs)
scaffold0115 (17-107)||(17550-17642)
[»] scaffold0251 (1 HSPs)
scaffold0251 (16-120)||(7035-7142)
[»] scaffold0598 (1 HSPs)
scaffold0598 (17-107)||(2586-2674)
[»] scaffold0116 (1 HSPs)
scaffold0116 (17-130)||(21735-21849)
[»] scaffold0488 (1 HSPs)
scaffold0488 (17-132)||(11394-11510)
[»] scaffold0056 (2 HSPs)
scaffold0056 (17-130)||(26449-26564)
scaffold0056 (17-107)||(35543-35633)
[»] scaffold0025 (1 HSPs)
scaffold0025 (22-121)||(73737-73835)
[»] scaffold0330 (1 HSPs)
scaffold0330 (37-120)||(491-575)
[»] scaffold0217 (3 HSPs)
scaffold0217 (17-130)||(729-845)
scaffold0217 (17-130)||(22956-23069)
scaffold0217 (17-107)||(18256-18347)
[»] scaffold0007 (3 HSPs)
scaffold0007 (17-77)||(59902-59962)
scaffold0007 (21-65)||(45931-45975)
scaffold0007 (21-64)||(63603-63646)
[»] scaffold0249 (1 HSPs)
scaffold0249 (17-130)||(18559-18672)
[»] scaffold0011 (2 HSPs)
scaffold0011 (18-107)||(66206-66294)
scaffold0011 (18-130)||(145249-145363)
[»] scaffold0043 (1 HSPs)
scaffold0043 (17-65)||(79159-79207)
[»] scaffold0364 (1 HSPs)
scaffold0364 (17-128)||(5372-5483)
[»] scaffold0273 (1 HSPs)
scaffold0273 (18-134)||(4883-4998)
[»] scaffold0352 (1 HSPs)
scaffold0352 (17-132)||(1617-1737)
[»] scaffold0064 (1 HSPs)
scaffold0064 (17-99)||(44665-44745)
[»] scaffold0607 (1 HSPs)
scaffold0607 (17-107)||(5354-5443)
[»] scaffold0247 (1 HSPs)
scaffold0247 (17-107)||(16514-16602)
[»] scaffold0018 (1 HSPs)
scaffold0018 (59-130)||(50480-50553)
[»] scaffold1294 (1 HSPs)
scaffold1294 (17-58)||(2039-2080)
[»] scaffold0337 (1 HSPs)
scaffold0337 (14-87)||(14208-14281)
[»] scaffold0065 (1 HSPs)
scaffold0065 (14-87)||(1250-1323)
[»] scaffold0040 (1 HSPs)
scaffold0040 (17-107)||(2870-2958)
[»] scaffold0525 (1 HSPs)
scaffold0525 (81-130)||(7054-7103)


Alignment Details
Target: chr2 (Bit Score: 543; Significance: 0; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 72 - 673
Target Start/End: Complemental strand, 19539706 - 19539104
Alignment:
Q  72 agaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatgtttttcacaccttcatattctactattcacctgcgcaaaatcgtaatgatttcaa 170  Q
    ||||||||||||||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  19539706 agaaaatgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcatattctactattcacctgcggaaaatcgtaatgatttcaa 19539607  T
Q  171 taattttcccgtaaggcttaggacaccactggtcaattcatatttagaaagtctcaatgaaataaattgtaaatattctagcaaccacgaggaatcatgt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19539606 taattttcccgtaaggcttaggacaccactggtcaattcatatttagaaagtctcaatgaaataaattgtaaatattctagcaaccacgaggaatcatgt 19539507  T
Q  271 ttaagaaattcaaacacaagaacggcttagaaaatactaataataaaatatctaatctcagtgtcaccaattagaatggtgtataatctgaaaaataaag 370  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19539506 ttaagaaattcaaacacaagaacagcttagaaaatactaataataaaatatctaatctcagtgtcaccaattagaatggtgtataatctgaaaaataaag 19539407  T
Q  371 tatttggcatgagatccaatacaagagtactaaaagagtaagccttcaacataaaagtaaaacgagaaagatttttgccattaaacatcaactataacct 470  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19539406 tatttggcatgagatccaatacaagagtactaaaagagtaagctttcaacataaaagtaaaacgagaaagattttcgccattaaacatcaactataacct 19539307  T
Q  471 gagatgtctaaccacattgatgaacgggatgatgagtaatcgaatcatgtgaatcataataataaatagagaaaacaaacacaagtagtcatatactcac 570  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19539306 gagatgtataaccacattgatgaacgggatgatgaggaatcgaatcatgtgaatcataataataaatagagaaaacaaacacaagtagtcatatactcac 19539207  T
Q  571 acttaatcacacaatcaataaatcatatgtttacatatttcacatttaggcaaaactcataataaacacacttccttaatatgattttaggtttgcgcgt 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19539206 acttaatcacacaatcaataaatcatatgtttacatatttcacatttaggtaaaactcatgataaacacacttccttaatatgattttaggtgtgcgcgt 19539107  T
Q  671 ggt 673  Q
    |||    
T  19539106 ggt 19539104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 24851463 - 24851577
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||||| ||||||| ||    
T  24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccctccttcttgtg 24851562  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  24851563 tttttctcaccttca 24851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22455750 - 22455865
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||| ||| |||||||||  |||||||||| |    
T  22455750 acatcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgt 22455849  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  22455850 gtttttctcaccttca 22455865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 39038431 - 39038546
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||| |     
T  39038431 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaactccccttcttgtt 39038530  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  39038531 tttttctcaccttcat 39038546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 28702015 - 28702129
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 28702114  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  28702115 tttttctcaccttca 28702129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 20569537 - 20569652
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||| ||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  20569537 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaccccccttctt 20569636  T
Q  113 atgtttttcacacctt 128  Q
     |||||||| ||||||    
T  20569637 gtgtttttctcacctt 20569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 25188711 - 25188609
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |||| |||    
T  25188711 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaccccccctcttgtgt 25188612  T
Q  117 ttt 119  Q
    |||    
T  25188611 ttt 25188609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 40780618 - 40780504
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  ||| |||||||||||| ||||||| ||    
T  40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtg 40780519  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  40780518 tttttctcaccttca 40780504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 45087788 - 45087902
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 45087887  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  45087888 tttttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 24575344 - 24575226
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc--ccttct 111  Q
    |||| ||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||  | ||||    
T  24575344 tggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaattcaacccttcattct 24575245  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  24575244 tgtgtttttctcaccttca 24575226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 17964091 - 17964208
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||| ||||| ||||||| |||||||||| || || ||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  17964091 tggaaatcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaccccccttctt 17964190  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  17964191 ttgtttttctcaccttca 17964208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22188898 - 22189013
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||   || |||||||||  |||| ||||| |    
T  22188898 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaatcccccgttcttgt 22188997  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  22188998 gtttttctcaccttca 22189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 24778640 - 24778525
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||  || ||||||||||  ||||||||| |    
T  24778640 acatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacgaagaaaaagccaacacaattcaacccccccttcttgt 24778541  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  24778540 gtttttctcaccttca 24778525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 22257501 - 22257383
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttct 111  Q
    |||| ||||||||||||| | |||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||| |||||| ||  |||||||||    
T  22257501 tggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaaagctaacacaattgaacccccccttct 22257402  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  22257401 tgtgtttttctcaccttca 22257383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 28551712 - 28551826
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| |||||||||||||||||||||||||||||||| |  ||||||| ||| ||||||| |||||||||| ||| ||||||||| |||||||||| ||    
T  28551712 acatctcttcagaagtagaactctatctgcttctgaactgcattttcag-ttatgagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtg 28551810  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  28551811 tttttctcaccttcat 28551826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 6391975 - 6391861
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||| || | || |||||||||   || |||||||||| ||||||||| ||    
T  6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaattcaaccccccttcttgtg 6391876  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  6391875 tttttctcaccttca 6391861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 41122473 - 41122586
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatgtt 117  Q
    |||||||||||||  ||||||||||||||||||| |||||  |||||  |||||||||| ||||||||||| || |||||||||||| ||||||| ||||    
T  41122473 atcacttcagaagctgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagtaaacacaattcaaccctccttcttgtgtt 41122570  T
Q  118 tttcacaccttcatat 133  Q
    |||| |||||||||||    
T  41122571 tttctcaccttcatat 41122586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 21537978 - 21538093
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||| ||||||||||  || ||||||||| |  ||||||| |     
T  21537978 acatcacttcagaagtagaactctatctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagcaaacacaattcaatcttccttcttgta 21538077  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  21538078 tttttctcaccttcat 21538093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 1587825 - 1587938
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| ||||||||||||||||||||||||||||||   || ||||||| ||||||||||| ||||||||||  |||||||| ||| |||||||||| ||    
T  1587825 acatctcttcagaagtagaactctatctgcttctgacttgtattttcag-ttaggagaaaaagaagaaaaagccaagacaatgcaaccccccttcttgtg 1587923  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  1587924 tttttctcaccttca 1587938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 6574957 - 6575015
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaa 6575015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 13964778 - 13964844
Alignment:
Q  21 cacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 13964844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 10010541 - 10010649
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||  ||| |||||| || ||||||||||| |    
T  10010541 acatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaactaacacaatttaa-ccccttcttatat 10010639  T
Q  117 ttttcacacc 126  Q
    ||||| ||||    
T  10010640 ttttctcacc 10010649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 27294800 - 27294685
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||| ||||||| || ||||| || |||||| ||||||||| |||||||||||||| |||||||||  ||| ||||||||||  ||||||||| |    
T  27294800 acatcactttagaagtaaaaatctatatgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccccccttcttgt 27294701  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  27294700 gtttttctcaccttca 27294685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 28712497 - 28712568
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||  |||||||||    
T  28712497 acatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaag 28712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 38780705 - 38780602
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||||| |||||| ||||||||||| |||  ||||||||| ||||||||||||| |||||||||   || |||||||| |||||||||| |||    
T  38780705 acatcacttcagatgtagaattctatctgcttatgattagtgttttcggcttaggagaaaaagaagaaaaaaccaacacaattcaccccccttcttgtgt 38780606  T
Q  117 tttt 120  Q
    ||||    
T  38780605 tttt 38780602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 20152790 - 20152856
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||||    
T  20152790 acttcagaagtagaactctatctgcttctgattagtgttttcaacttaggagaaaaagaagaaaaag 20152856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 23234262 - 23234192
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| ||| |||||    
T  23234262 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcataggagaaaaagaaaaaaaa 23234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 23185123 - 23185211
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||| ||||||||||||||||||| || ||  |||||  |||||||||| |||||||||| ||| ||||||||||||||    
T  23185123 acatcacttcagaagttgaactctatctgcttctgatcaatgacttcag--taggagaaaaagaagaaaaagctaacacaattcaaccccc 23185211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 23596386 - 23596474
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||| ||||||||||||||||||| || ||  |||||  |||||||||| |||||||||| ||| ||||||||||||||    
T  23596386 acatcacttcagaagttgaactctatctgcttctgatcaatgacttcag--taggagaaaaagaagaaaaagctaacacaattcaaccccc 23596474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 25828466 - 25828352
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| ||||||| ||||| | || ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| ||| | |||||||| |||||||||    
T  25828466 tggaaatcactttagaagcataaatctatttgcttctgatcagtgtttttaccttaggagaaaacgaagaaaaagctaacataattcaaccccccttctt 25828367  T
Q  113 atgtttttcacacct 127  Q
     |||||||| |||||    
T  25828366 gtgtttttctcacct 25828352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 31328765 - 31328878
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||  |||||| |||| ||||||||||| ||||||||||||||  |||||||||| |||||||||   || ||||||||| |||||||||| ||    
T  31328765 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcag-ataggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtg 31328863  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  31328864 tttttctcaccttca 31328878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 31335486 - 31335599
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||  |||||| |||| ||||||||||| ||||||||||||||  |||||||||| |||||||||   || ||||||||| |||||||||| ||    
T  31335486 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcag-ataggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtg 31335584  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  31335585 tttttctcaccttca 31335599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 31801676 - 31801766
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||| | || |||||||||   || ||||||||||||||    
T  31801676 acatcactttaaaagcagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaattcaaccccc 31801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 22782429 - 22782536
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtttttc 121  Q
    |||||||||||||||| ||||| |||||||||||  |||| || | ||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||     
T  22782429 cttcagaagtagaactttatcttcttctgaacagcttttttaggt-aggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgttttta 22782527  T
Q  122 acaccttca 130  Q
     ||||||||    
T  22782528 tcaccttca 22782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 22786453 - 22786562
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa---cccccttcttatgtttt 119  Q
    |||||||||||||||||||||||||| ||||||   |||||||| ||||| |||| |||||||||| ||| |||||||||   ||||| |||| ||||||    
T  22786453 cttcagaagtagaactctatctgcttatgaacaactttttcagc-taggataaaaagaagaaaaagctaacacaattcaaacccccccctcttgtgtttt 22786551  T
Q  120 tcacaccttca 130  Q
    || ||||||||    
T  22786552 tctcaccttca 22786562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 16494655 - 16494537
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||||||||  | |  ||||||  |||||||||| |||||||||| |||  |||||||| |||||||||| |    
T  16494655 acatctcttcagaagtagaactctatctgcttctgaattgcttgtttcag-ataggagaaaaagaagaaaaagctaacccaattcaaccccccttcttgt 16494557  T
Q  115 gtttttcacaccttcatatt 134  Q
    ||||||| || |||||||||    
T  16494556 gtttttctcaacttcatatt 16494537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 24376384 - 24376310
Alignment:
Q  60 tttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttatgtttttcacaccttcata 132  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||| |||||||| ||||||||||    
T  24376384 tttcagcttaggagaaaacgaagaaaaacttaacacaattcaacccccccttcttgtgtttttctcaccttcata 24376310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 22316898 - 22316794
Alignment:
Q  21 cacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttt 119  Q
    |||||||||||| ||||| ||||||||||||| ||||| |||||||||||||         |||||||| ||| | ||||||||||||||||| ||||||    
T  22316898 cacttcagaagtggaactatatctgcttctgatcagtgtttttcagcttagg---------agaaaaagctaacagaattcaacccccttcttgtgtttt 22316808  T
Q  120 tcacaccttcatat 133  Q
    || |||||||||||    
T  22316807 tctcaccttcatat 22316794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 22801783 - 22801723
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    ||||||||| |||||||||||||||||||||| | | ||||||||||||||||| ||||||    
T  22801783 acatcactttagaagtagaactctatctgcttataatcagtgttttcagcttagaagaaaa 22801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 31968574 - 31968677
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcac 123  Q
    ||||||||||||| ||||||||||||||||| |  ||||||  |||| || |||  || |||||| ||| ||||||||||||||||||| |||||||| |    
T  31968574 ttcagaagtagaattctatctgcttctgaactgcattttcaa-ttagtagcaaaaaaataaaaagctaacacaattcaacccccttcttgtgtttttctc 31968672  T
Q  124 acctt 128  Q
    |||||    
T  31968673 acctt 31968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 38631048 - 38630968
Alignment:
Q  27 agaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||| | ||| ||||||||| |||||||||||||||||||||||| ||| |||||||||| ||| ||||| ||||    
T  38631048 agaagcagaattgtatttgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagttaacacagttcaatcccc 38630968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 44839734 - 44839651
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||||||||||||||| ||| |  ||||||| ||||||||||| |||||||||   || |||||||||||||||    
T  44839734 ttcagaagtagaactctatctgcttctaaactgcattttcag-ttaggagaaaaagaagaaaaatcaaacacaattcaaccccct 44839651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 22271401 - 22271293
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtt 117  Q
    ||||||||||||||  ||||||||||||||| ||| |||||  |||||  |||||||||  ||||||||||| || ||||||||| ||||  | ||||||    
T  22271401 catcacttcagaagctgaactctatctgcttatgatcagtgacttcag--taggagaaatcgaagaaaaagtaaacacaattcaatcccc--cctatgtt 22271306  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  22271305 tttctcaccttca 22271293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 40331096 - 40330995
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtt 117  Q
    |||| |||||||||||||||||||||||||| ||||| |  |||| || ||||||||||  |||||||||   || ||||||||||||| ||||| ||||    
T  40331096 catctcttcagaagtagaactctatctgcttatgaactgcatttttag-ttaggagaaatagaagaaaaaacaaacacaattcaacccctttcttgtgtt 40330998  T
Q  118 ttt 120  Q
    |||    
T  40330997 ttt 40330995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 24724168 - 24724099
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||||||||||||||  ||||||||||||||||||| || || ||||||  |||||||||| ||||||||||    
T  24724168 acatcacttcagaagctgaactctatctgcttctgaccaatgatttcag--taggagaaaacgaagaaaaag 24724099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 22682693 - 22682642
Alignment:
Q  80 aagaaaaagttaagacaattcaaccccc-ttcttatgtttttcacaccttca 130  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  22682693 aagaaaaagttaacacaattcaaccccccttcttgtgtttttcacaccttca 22682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 34322720 - 34322806
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc 104  Q
    ||||| ||||||||||||||||  ||||| || ||| | |||||||||| ||||||||||| ||||||||||| |  |||||||||||    
T  34322720 acatctcttcagaagtagaactacatctgtttttgatctgtgttttcag-ttaggagaaaaagaagaaaaagtcagcacaattcaacc 34322806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 28790128 - 28790176
Alignment:
Q  82 gaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    |||||||| || ||||||||||||||||||||| |||||| ||||||||    
T  28790128 gaaaaagtcaacacaattcaacccccttcttatatttttctcaccttca 28790176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 26623262 - 26623330
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||||||||||||||  ||| |||||||||||||||||||||  || ||  |||||||||| |||||||||    
T  26623262 acatcacttcagaaggtgaattctatctgcttctgaacagtgacttaag--taggagaaaacgaagaaaaa 26623330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 18377031 - 18377104
Alignment:
Q  33 agaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||| ||||| |  ||| ||| ||||||||||||||| |||||||||  ||| ||||||||||||||    
T  18377031 agaactctatct-cttcttattagtatttccagcttaggagaaaacgaagaaaaaactaacacaattcaaccccc 18377104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 26367200 - 26367233
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctga 52  Q
    ||||||||||||||| ||||||||||||||||||    
T  26367200 atcacttcagaagtaaaactctatctgcttctga 26367233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 40331421 - 40331388
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctg 51  Q
    |||| |||||||||||||||||||||||||||||    
T  40331421 catctcttcagaagtagaactctatctgcttctg 40331388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 3e-41; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 4493853 - 4493735
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||| ||    
T  4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtg 4493754  T
Q  116 tttttcacaccttcatatt 134  Q
    |||||| ||||||||||||    
T  4493753 tttttctcaccttcatatt 4493735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 2499337 - 2499220
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  2499337 acatcatttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtg 2499238  T
Q  116 tttttcacaccttcatat 133  Q
    |||||| |||||||||||    
T  2499237 tttttctcaccttcatat 2499220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 11792179 - 11792062
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||| ||    
T  11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagataacacaattcaaccccccttcttgtg 11792080  T
Q  116 tttttcacaccttcatat 133  Q
    |||||| |||||||||||    
T  11792079 tttttctcaccttcatat 11792062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 21284223 - 21284341
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||| || ||||||||| |||||||||| ||    
T  21284223 acatcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaattcaaccccccttcttgtg 21284322  T
Q  116 tttttcacaccttcatatt 134  Q
    |||||| ||||||||||||    
T  21284323 tttttctcaccttcatatt 21284341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 14186995 - 14186880
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| || ||||||||||  ||||||||| |    
T  14186995 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgt 14186896  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  14186895 gtttttctcaccttca 14186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 13027800 - 13027914
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||  || ||||||||||| |||||||| ||    
T  13027800 acatcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaattcaacctcccttcttgtg 13027899  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  13027900 tttttctcaccttca 13027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 21691733 - 21691617
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc---ttctta 113  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||  || ||||||||||||||   |||||     
T  21691733 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaattcaaccccccctttcttg 21691634  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  21691633 tgtttttctcaccttca 21691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 41843271 - 41843384
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||| ||| |||||||||| ||| |||||||     
T  41843271 acatcacttcagaagtagaactctttctgcttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaattcaactccctttcttata 41843370  T
Q  116 tttttcacaccttc 129  Q
    |||||| |||||||    
T  41843371 tttttctcaccttc 41843384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 35954762 - 35954850
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  35954762 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaaccccc 35954850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 16557466 - 16557573
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtttttca 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||  || ||||||||| |||||||||| ||||||||     
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttct 16557565  T
Q  123 caccttca 130  Q
    ||||||||    
T  16557566 caccttca 16557573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 16608196 - 16608089
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtttttca 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||  || |||||||||| ||||||||| ||||||||     
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttct 16608097  T
Q  123 caccttca 130  Q
    ||||||||    
T  16608096 caccttca 16608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 16546186 - 16546276
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  16546186 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 16546276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 16619476 - 16619386
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  16619476 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 16619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 13034702 - 13034818
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaag-aaaaagttaagacaattcaa--cccccttctta 113  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||  ||| |||||||||  ||||||||||     
T  13034702 acatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaaaataacacaattcaacccccccttcttg 13034801  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||  ||||||||    
T  13034802 tgtttttatcaccttca 13034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 13473336 - 13473452
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||  | | ||||||||| ||||||||| | |    
T  13473336 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaact-acacaattcaagccccttcttgtat 13473434  T
Q  117 ttttcacaccttcatatt 134  Q
    ||||| || |||||||||    
T  13473435 ttttctcatcttcatatt 13473452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16315383 - 16315503
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc--ccttct 111  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||||  ||||||    
T  16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaattcaacccctccttct 16315482  T
Q  112 tatgtttttcacaccttcata 132  Q
    | |||||||| |||| |||||    
T  16315483 tgtgtttttctcaccgtcata 16315503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 10884021 - 10884133
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtt 117  Q
    ||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||| ||||    
T  10884021 atcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaaccccccttcttgtgtt 10884120  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  10884121 tttctcaccttca 10884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 13138774 - 13138889
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc--cttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| || ||||||| ||||||||||  || |||||||||||||  |||||| |    
T  13138774 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcataagagaaaaagaagaaaaagccaacacaattcaaccccctcttcttgt 13138873  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  13138874 gtttttctcaccttca 13138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 28623202 - 28623290
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc 105  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  || ||||||||||||    
T  28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccc 28623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 19328859 - 19328950
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  || |||||||||||||||    
T  19328859 acatcacttcagaagtagaactctatctgcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaattcaaccccct 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 33692571 - 33692686
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttat 114  Q
    |||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||||||| |||||||||||||| |||||||||| |||||| || |    
T  33692571 acatcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaaggaagaaaaagttaacacaattcaactcccctttttgt 33692670  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  33692671 gtttttctcaccttca 33692686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 12367606 - 12367696
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||| ||| ||||||||||||||    
T  12367606 acatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaagataacacaattcaaccccc 12367696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 13261524 - 13261642
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||||||| |||||||||| ||||||||| || ||| ||||||||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  13261524 acatcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtg 13261623  T
Q  116 tttttcacaccttcatatt 134  Q
    |||||| |||||| |||||    
T  13261624 tttttctcacctttatatt 13261642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 13879452 - 13879362
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||| ||||||||||  || ||||||||||||||    
T  13879452 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaaccccc 13879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 14424616 - 14424526
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||||||||||    
T  14424616 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaaccccc 14424526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 15467224 - 15467134
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||    
T  15467224 acatcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaattcaaacccc 15467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 33604213 - 33604099
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||| ||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||| ||||||||| ||    
T  33604213 acatcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtg 33604114  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  33604113 tttttctcaccttca 33604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 48237687 - 48237773
Alignment:
Q  20 tcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||| || |||||||||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaagagaaaaagaagaaaaagtcaacacaattcaacccc 48237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 13731522 - 13731615
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  13731522 tggaaatcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 13731615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 15087862 - 15087743
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaac-agtgttttcagcttaggag-aaaatgaagaaaaagttaagacaattcaa--cccccttctt 112  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| |||| ||||||||||| || ||| |||||  ||||||||||    
T  15087862 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttatgagaaaaaagaagaaaaagtcaacacagttcaacccccccttctt 15087763  T
Q  113 atgtttttcacaccttcata 132  Q
     |||||||| ||||||||||    
T  15087762 gtgtttttctcaccttcata 15087743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 30025243 - 30025128
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||| ||| |||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||  || ||||||||||  ||||||||| |    
T  30025243 acatcacatcataagtagaactttatctgcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccccccttcttgt 30025144  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  30025143 gtttttctcaccttca 30025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 13259292 - 13259410
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||| ||||| |||||||||| |  |||||| ||||||| |||||||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  13259292 acatcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtg 13259391  T
Q  116 tttttcacaccttcatatt 134  Q
    |||||| ||||||||||||    
T  13259392 tttttctcaccttcatatt 13259410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 13645763 - 13645670
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| |||| |||||||| |||||||||| ||||||||| | |||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  13645763 tggaaatcagttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 13645670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 9710683 - 9710802
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||  |||||  || ||||||||||| ||||||||      
T  9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaaccgcccttcttgc 9710781  T
Q  115 gtttttcacaccttcatattc 135  Q
    ||||||| |||||||| ||||    
T  9710782 gtttttctcaccttcacattc 9710802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 13302168 - 13302081
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    ||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||| |||||||||  ||| |||||||||||||    
T  13302168 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 13302081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 22580103 - 22580193
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||| ||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||| ||||||||||  || ||||||||||||||    
T  22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaattcaaccccc 22580193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 24787672 - 24787579
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| ||||||||||||| |||||||||| |||| || |  |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  24787672 atggaaatcacttcagaagaagaactctatttgct-ctaataagtgttttcagcttaggagaaaatgaagaaaaggttaatacaattcaaccccc 24787579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 8182265 - 8182153
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| |||||||| ||||||||||||||||||||| | |  ||||||| |||||||||||  |||||||||  || ||||||||||||||||||| |||    
T  8182265 acatctcttcagaaatagaactctatctgcttctgatctgcattttcag-ttaggagaaaaacaagaaaaaggcaacacaattcaacccccttcttgtgt 8182167  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  8182166 ttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 48063666 - 48063774
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttca 122  Q
    |||||||||||||||||||||||||| ||||| |  ||||||| ||||||||||| |||||||||  ||  | ||||||||||||||||| ||||||||     
T  48063666 cttcagaagtagaactctatctgcttttgaactgcattttcag-ttaggagaaaaagaagaaaaaactagcataattcaacccccttcttgtgtttttct 48063764  T
Q  123 caccttcata 132  Q
    ||||||||||    
T  48063765 caccttcata 48063774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 1292351 - 1292241
Alignment:
Q  27 agaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttatgtttttcaca 124  Q
    |||||||||| ||||||||||||||||| |  ||||||| ||||||||||| |||||||||| ||| ||||||||||  ||||||||| |||||||| ||    
T  1292351 agaagtagaattctatctgcttctgaactgcattttcag-ttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctca 1292253  T
Q  125 ccttcatattct 136  Q
    |||||| |||||    
T  1292252 ccttcagattct 1292241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 5001711 - 5001826
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||||| |||||| ||| ||||||||| ||||| |||||||||||||||||| |||||||||| ||| | |||| |||  || |||||| |    
T  5001711 acatcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaaacgaagaaaaagctaacataatttaacctccacttcttgt 5001810  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  5001811 gtttttctcaccttca 5001826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 15705343 - 15705446
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| |||||||||||||||||||| ||||||||| | |||||||||| ||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  15705343 acatctcttcagaagtagaactctatttgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 15705441  T
Q  116 ttttt 120  Q
    |||||    
T  15705442 ttttt 15705446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 2914502 - 2914589
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa 102  Q
    |||| ||| ||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| ||| |||||||||    
T  2914502 tggaaatctcttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggag-aaacgaagaaaaagctaacacaattcaa 2914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 32265559 - 32265673
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||||||||| |  |||| || ||| ||||||| |||||||||  ||| |||||||||  |||||||||| |    
T  32265559 acatctcttcagaagtagaactctatctgcttctgaactgcatttttag-ttaagagaaaaagaagaaaaacctaacacaattcaactcccccttcttgt 32265657  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  32265658 gtttttctcaccttca 32265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 11318707 - 11318589
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc--ccttct 111  Q
    |||| |||||||||||||  ||||||||| | ||||||| ||||||||||||||||| ||||||  || |||||| ||  ||||||||||||  ||||||    
T  11318707 tggaaatcacttcagaagccgaactctattttcttctgatcagtgttttcagcttagaagaaaactaaaaaaaagctagcacaattcaacccctccttct 11318608  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  11318607 tgtgtttttctcaccttca 11318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 16317445 - 16317516
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    ||||||||||||||| |||||| ||| ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  16317445 acatcacttcagaagcagaactttatttgcttctgatcagtgttttcagcttatgagaaaacgaagaaaaag 16317516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 23280824 - 23280915
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||  ||| ||||||| ||||||    
T  23280824 acatcactttagaagtggaacactatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaattctaccccc 23280915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 4820794 - 4820705
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||| ||| |||||| |||| ||||||  || ||||||||||||||    
T  4820794 acatcacttcaaaagtagaactctatctgcttctgattagtgttttcag-ttatgagaaattgaataaaaagcaaacacaattcaaccccc 4820705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 12175183 - 12175297
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| |||||||| | ||||||||||||| ||||||||||| ||| ||||||||  ||||||||   || ||||||||||||||  ||| |||    
T  12175183 acatcacttcaaaagtagaaatttatctgcttctgatcagtgttttcaactttggagaaaaacaagaaaaaaccaacacaattcaaccccccgcttgtgt 12175282  T
Q  117 ttttcacaccttcat 131  Q
    |||||  ||||||||    
T  12175283 ttttcttaccttcat 12175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 9069073 - 9069000
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaa 86  Q
    ||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  9069073 atggaaatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaa 9069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 13681607 - 13681534
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||| ||||||||||||| |||||||||| ||||||| | || ||||||||||||||||||||| |||||||||    
T  13681607 tggaaatcacttcagaagcagaactctatttgcttctaatcaatgttttcagcttaggagaaaacgaagaaaaa 13681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 29936194 - 29936265
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    ||||||||||||||| |||||||||| ||||||||| || |||||||| |||| ||||||| ||||||||||    
T  29936194 acatcacttcagaagcagaactctatttgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaag 29936265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 15574457 - 15574546
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||| ||||||||||||||||||||||| | || ||||||  ||||||||||| ||||||||||  || ||||||||||||||    
T  15574457 acatctcttcagtagtagaactctatctgcttctgatctgtattttca-attaggagaaaaagaagaaaaagccaacacaattcaaccccc 15574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16155591 - 16155649
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||    
T  16155591 atcacttcagaagtagaattctatctgcttctgattagtgttttcaacttaggagaaaa 16155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 39285390 - 39285504
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||  ||||||||||| |||||||  | ||  |||||  ||||||||||||||||||||  ||| |||||||||  |||||||||| |    
T  39285390 acatcacttcagaagctgaactctatctacttctgattactgacttcag--taggagaaaatgaagaaaaaagtaacacaattcaatccccccttcttgt 39285487  T
Q  115 gtttttcacaccttcat 131  Q
    ||||||| |||||||||    
T  39285488 gtttttctcaccttcat 39285504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 48806736 - 48806846
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaa---atgaagaaaaagttaagacaattcaa-cccccttcttatgttt 118  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||||||||   || ||||||||| ||| ||||||||| |||||||||| |||||    
T  48806736 ttcagaagtagaactctatctgcttctgaactgcttgtttcag-ttaggagaaaaagattaagaaaaagataacacaattcaaccccccttcttgtgttt 48806834  T
Q  119 ttcacaccttca 130  Q
    ||| ||||||||    
T  48806835 ttctcaccttca 48806846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 3779534 - 3779586
Alignment:
Q  80 aagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttcata 132  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  3779534 aagaaaaagctaacacaattcaacccccttcttatgtttttctcaccttcata 3779586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 16310804 - 16310892
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc 105  Q
    ||||||||||||||| |||| | ||| |||||||||  ||||||||||||| |||| |||| ||| |||||| ||| ||||||||||||    
T  16310804 acatcacttcagaagcagaattatatttgcttctgattagtgttttcagctaaggacaaaacgaaaaaaaagctaacacaattcaaccc 16310892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 30946255 - 30946315
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    ||||||||||||| |||||||||||||||||||| | |||||| |||| ||||||||||||    
T  30946255 acatcacttcagacgtagaactctatctgcttctaatcagtgtattcaacttaggagaaaa 30946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 4832173 - 4832216
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtt 60  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  4832173 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 4832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 19237910 - 19238022
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||| ||||||||| ||||| | |  ||||  |||||  || ||||||||||||||||||  || ||||||||| |||||||||| ||    
T  19237910 acatcacttcagaagttgaactctatttgcttataactagtgacttcag--taagagaaaatgaagaaaaagaaaacacaattcaaccccccttcttttg 19238007  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  19238008 tttttctcaccttca 19238022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 33421056 - 33420976
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc 105  Q
    |||| ||||| ||||||||| |||||||| | |||||||||| ||||||||||| ||||||||||  || ||||||||||||    
T  33421056 ttcaaaagtataactctatccgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccc 33420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 13902504 - 13902617
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    ||||||| |||||||| ||||||||| ||||||||| || ||  ||  |  |||||||||| |||||||||| ||| ||||||||||| |||||||| ||    
T  13902504 acatcacatcagaagttgaactctatttgcttctgatcattgacttatg--taggagaaaacgaagaaaaagctaacacaattcaacctcccttcttgtg 13902601  T
Q  116 tttttcacaccttcat 131  Q
    |||||| | |||||||    
T  13902602 tttttctccccttcat 13902617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 22727272 - 22727224
Alignment:
Q  83 aaaaagttaagacaattcaacccccttcttatgtttttcacaccttcat 131  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||    
T  22727272 aaaaagtcaatacaattcaacccccttcttatgtttttctcaccttcat 22727224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 27871026 - 27870937
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||| ||||||||||||||||| |  | || || ||||||||||| |||||||||   || ||||||||||||||    
T  27871026 acatctcttcagaagtagaattctatctgcttctgaactgcatctttag-ttaggagaaaaagaagaaaaacaaaacacaattcaaccccc 27870937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21211427 - 21211542
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac----ccccttctt 112  Q
    |||||| ||||||||  ||||||||||| ||||||| ||| |  |||||  |||||||||| ||| |||||| ||| ||||||||||    |||||||||    
T  21211427 acatcatttcagaagctgaactctatctacttctgatcagcgacttcag--taggagaaaacgaataaaaagctaacacaattcaacccctccccttctt 21211524  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  21211525 gtgtttttctcaccttca 21211542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 44466389 - 44466276
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattc-aacccccttcttatg 115  Q
    ||||||||||||| |||||||| ||| || || ||| || ||||||| |||| |||||||| |||||||||   || ||||||| ||| | | |||||||    
T  44466389 acatcacttcagaggtagaactttatttgtttttgatcaatgttttcggcttcggagaaaaagaagaaaaaaccaacacaattcaaactctcctcttatg 44466290  T
Q  116 tttttcacaccttc 129  Q
    |||||| |||||||    
T  44466289 tttttctcaccttc 44466276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 16911731 - 16911797
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    ||||||||||||||||||||      ||||| |||| ||||||| |||||||||||||||| ||||||||||    
T  16911731 acatcacttcagaagtagaaa-----ctgctcctgatcagtgttatcagcttaggagaaaaagaagaaaaag 16911797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 9802330 - 9802280
Alignment:
Q  79 gaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttc 129  Q
    |||||||||  ||| ||||||||||||||||||| |||||||| |||||||    
T  9802330 gaagaaaaatctaacacaattcaacccccttcttgtgtttttctcaccttc 9802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 14424816 - 14424755
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaa 86  Q
    ||||||||||||||||||||||||||||||  |  ||||||| ||||||||||| | ||||||    
T  14424816 ttcagaagtagaactctatctgcttctgaattgcattttcag-ttaggagaaaaaggagaaaa 14424755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 4412881 - 4412930
Alignment:
Q  81 agaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  4412881 agaaaaagaaaacacaattcaacccccttcttttgtttttctcaccttca 4412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 8933003 - 8932954
Alignment:
Q  81 agaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  8933003 agaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 9761069 - 9761036
Alignment:
Q  96 aattcaacccccttcttatgtttttcacaccttc 129  Q
    |||||||||||||||||||||||||| |||||||    
T  9761069 aattcaacccccttcttatgtttttctcaccttc 9761036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 44397516 - 44397403
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||  || |||||||||||||||||||||||    
T  44397516 acatcacttcagaagcagaactctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccccttcttatgt 44397417  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  44397416 ttttctcaccttca 44397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22676362 - 22676475
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||| |||||||||| |||    
T  22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaccccccttcttgtgt 22676461  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  22676462 ttttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 3792640 - 3792527
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||  || |||||||||||||| ||||  ||    
T  3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccgtcttgcgt 3792541  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  3792540 ttttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 12600060 - 12599948
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtt 117  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  12600060 atcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccccttcttatgtt 12599961  T
Q  118 tttcacaccttca 130  Q
    |||| ||| ||||    
T  12599960 tttctcacattca 12599948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 24628699 - 24628814
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||  || ||||||| |    
T  24628699 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaactcctccttcttgt 24628798  T
Q  115 gtttttcacaccttca 130  Q
     |||||| ||||||||    
T  24628799 atttttctcaccttca 24628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 29120675 - 29120560
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||  || ||||||||||  ||||||||| |    
T  29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaattcaacccccccttcttgt 29120576  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  29120575 gtttttctcaccttca 29120560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 54679168 - 54679058
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||  || |||||||||| ||||||||| ||    
T  54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 54679069  T
Q  116 tttttcacacc 126  Q
    |||||| ||||    
T  54679068 tttttctcacc 54679058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 14905127 - 14905242
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||  || |||||||||  ||||||| || |    
T  14905127 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaatccccccttgttgt 14905226  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  14905227 gtttttcccaccttca 14905242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 23749833 - 23749742
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||    
T  23749833 acatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccct 23749742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 14605707 - 14605832
Alignment:
Q  17 acatcacttcagaa-gtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttctta 113  Q
    |||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||| |||||||||  ||||||||||     
T  14605707 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttg 14605806  T
Q  114 tgtttttcacaccttcatattctact 139  Q
    |||||||| |||||||| ||||||||    
T  14605807 tgtttttctcaccttcaaattctact 14605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 10071811 - 10071687
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-----ccccttct 111  Q
    |||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||| |||| |||||||||| ||| ||||||||||     ||||||||    
T  10071811 acatcacttcagaagtggaactctatttgcttcttatcagtgttttcagcttaggaaaaaaagaagaaaaagataacacaattcaactccctccccttct 10071712  T
Q  112 tatgtttttcacaccttcatattct 136  Q
    |||||||||| ||||||||| ||||    
T  10071711 tatgtttttctcaccttcatcttct 10071687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 17246917 - 17246847
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  17246917 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 56033835 - 56033722
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttcttat 114  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||   || |||||||||||  || ||||| |    
T  56033835 acatcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccctccattcttgt 56033736  T
Q  115 gtttttcacacctt 128  Q
    ||||||| ||||||    
T  56033735 gtttttctcacctt 56033722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 29681315 - 29681432
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctt 112  Q
    ||||| ||||||||||||| || ||||||| ||||| ||| |||||||||||||||||||||||| |||||||||| ||| || ||||||||| | ||||    
T  29681315 atggaaatcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacactattcaacccacctctt 29681414  T
Q  113 atgtttttcacaccttca 130  Q
     ||||||||| |||||||    
T  29681415 gtgtttttcagaccttca 29681432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 55379619 - 55379515
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattc-aacccccttcttatg 115  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  | | ||||||| |||||||||| | ||    
T  55379619 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgaaggaaaaactcacacaattcaaacccccttcctgtg 55379520  T
Q  116 ttttt 120  Q
    |||||    
T  55379519 ttttt 55379515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 3106218 - 3106331
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| |||||||||||||||||||||||||||||||| |  ||||||| ||||||||||| |||||||||| ||| ||||||||| ||||||||| |||    
T  3106218 acatctcttcagaagtagaactctatctgcttctgaactgcattttcag-ttaggagaaaaagaagaaaaagctaacacaattcaa-ccccttcttgtgt 3106315  T
Q  117 ttttcacaccttcata 132  Q
    |||||  |||||||||    
T  3106316 ttttcttaccttcata 3106331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 22089589 - 22089478
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||  ||||||||||||||||||| |||||  |||||  ||| | |||| |||||||||||||| ||||||||||||||||||| |||    
T  22089589 acatcacttcagaagctgaactctatctgcttctgatcagtgacttcag--tagaataaaacgaagaaaaagttaacacaattcaacccccttcttgtgt 22089492  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  22089491 ttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 19611171 - 19611288
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||| ||||||||||||| |||||||||| ||||||||| | |||||| ||| ||||||||||| |||||||||  ||| ||||||||| ||||||||||    
T  19611171 tggaaatcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaaacgaagaaaaaactaacacaattcaaccccccttctt 19611270  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  19611271 gtgtttttctcaccttca 19611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 10072197 - 10072073
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-----cccttct 111  Q
    ||||||||||||||||  |||||||  ||||||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||||     |||||||    
T  10072197 acatcacttcagaagtgaaactctagttgcttctgatcagtgttttcatcttaggagaaaaagaagaaaaagctaacacaattcaaccccctccccttct 10072098  T
Q  112 tatgtttttcacaccttcatattct 136  Q
    | |||||||| ||||||||| ||||    
T  10072097 tgtgtttttctcaccttcatcttct 10072073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 13576950 - 13577069
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||  |||||  || ||||||||||| ||||||||      
T  13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaaccgcccttcttgc 13577048  T
Q  115 gtttttcacaccttcatattc 135  Q
    ||||||| |||||||| ||||    
T  13577049 gtttttctcaccttcacattc 13577069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 37436332 - 37436445
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||   || |||||| || |||||||||| ||    
T  37436332 acatcacttcataagtagaactctatctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaa-ccaacacaatttaaccccccttcttgtg 37436430  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  37436431 tttttctcaccttca 37436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 17399482 - 17399597
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||||||||  |  ||||||| ||||||||||| |||||||||  ||| |||||||||  |||||||||| |    
T  17399482 acatctcttcagaagtagaactctatctgcttctgaattgcattttcag-ttaggagaaaaagaagaaaaacctaacacaattcaacccccccttcttgt 17399580  T
Q  115 gtttttcacaccttcat 131  Q
    ||||||| |||||||||    
T  17399581 gtttttctcaccttcat 17399597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 23120848 - 23120732
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctt 112  Q
    |||| ||||||||||||| |||||||||| |||||||||  ||| |||| |||||||||||||||||||||||||| ||| |||||||||||| | | ||    
T  23120848 tggaaatcacttcagaagcagaactctatttgcttctgattagtctttttcagcttaggagaaaatgaagaaaaagctaacacaattcaaccctcct-tt 23120750  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  23120749 gtgtttttctcaccttca 23120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 41115618 - 41115728
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattc-aacccccttcttatgtt 117  Q
    |||||||||||||  ||||||||||||||||||| ||| |  |||||  |||||||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  41115618 atcacttcagaagctgaactctatctgcttctgatcagcgacttcag--taggagaaaacgaagaaaaagttaacacaattcaaacccccttcttgtgtt 41115715  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  41115716 tttctcaccttca 41115728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 15135026 - 15134915
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||| |||||| ||||||||| ||||||||| ||||||||||| |||| ||||||| ||||||| |  ||| |||||||||| ||||||||| ||    
T  15135026 acatcactttagaagtggaactctatttgcttctgatcagtgttttcaacttaagagaaaacgaagaaataactaacacaattcaaccccccttcttgtg 15134927  T
Q  116 tttttcacacct 127  Q
    |||||| |||||    
T  15134926 tttttctcacct 15134915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 19884000 - 19883910
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| |||||| ||| |||||||||||||||  |||||||| |||||||||||||| |||||||||  ||| ||||||||||||||    
T  19884000 acatcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaattcaaccccc 19883910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 16631749 - 16631631
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc--cttct 111  Q
    |||| |||| || ||||| | |||||||| ||||| ||| |||||||||||||||||||||||| |||||||||   || |||||||||||||  |||||    
T  16631749 tggaaatcattttagaagcaaaactctatttgcttttgatcagtgttttcagcttaggagaaaaggaagaaaaaaccaacacaattcaaccccctcttct 16631650  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  16631649 tgtgtttttctcaccttca 16631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 6516791 - 6516702
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| ||||||||||| ||| ||||||  || ||||||||||||||    
T  6516791 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaataaaaagccaacacaattcaaccccc 6516702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 11914959 - 11914864
Alignment:
Q  34 gaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtttttcacaccttca 130  Q
    ||||||||| ||||||||| ||||| ||||||  |||||||||| |||||||||||||| ||||||||| ||||||||||  ||||||| ||||||||    
T  11914959 gaactctatttgcttctgaccagtgatttcag--taggagaaaacgaagaaaaagttaacacaattcaatcccccttctttagtttttctcaccttca 11914864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 19621792 - 19621882
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| ||||| |||||| ||| ||||| ||| | ||||||||| |||||||||||| |||||||||| ||| ||||||||||||||    
T  19621792 acatcactttagaagcagaactttatttgcttttgatccgtgttttcatcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 19621882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 19665676 - 19665587
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc 104  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||  ||| ||||| |||||    
T  19665676 tggaaatcacttcagaagaagaactctatttgcttctgatcagt-ttttcagcttaggagaaaacgaagaaaaatctaacacaatccaacc 19665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 36470227 - 36470134
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||||| ||||| |||||||||| || |||||  |||| |||||| |||||||||||| |||||||||| ||| ||||||||||||||    
T  36470227 tggaaatcactttagaagcagaactctatttgtttctggtcagtattttcaacttaggagaaaacgaagaaaaagataacacaattcaaccccc 36470134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 37986420 - 37986504
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    |||||||||  |||||||||| ||||| ||| |||||||||||| ||||||||||| |||||||||  ||| |||||||||||||    
T  37986420 acttcagaataagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaactaacacaattcaacccc 37986504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 15560577 - 15560463
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||  |||||||||  | ||||||||||||  ||||| |||||||||||  |||||||||  || |||||||||| ||||||||| ||    
T  15560577 acatcacttcagaagctgaactctattaggttctgaacagtgacttcagtttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtg 15560478  T
Q  116 tttttcacaccttca 130  Q
    |||||  ||||||||    
T  15560477 tttttttcaccttca 15560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 11900413 - 11900324
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||   ||||||||||||||||||||||||| ||||||  ||||| |||| ||| |||||  ||| |||||||||||||||    
T  11900413 acatcacttcagaatctgaactctatctgcttctgaacagtgatttcag--taggaaaaaacgaaaaaaaaactaacacaattcaaccccct 11900324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 22190153 - 22190038
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaac-agtgttttcagcttaggagaaaatg-aagaaaaagttaagacaattcaacccc-cttctta 113  Q
    ||||| |||||||||||||||||||||| ||||||||| |   ||||||| |||||| |||| | |||||||||  || ||||||||||||| |||||||    
T  22190153 acatctcttcagaagtagaactctatctccttctgaactacaattttcag-ttaggaaaaaaagaaagaaaaagaaaacacaattcaacccctcttctta 22190055  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  22190054 tgtttttctcaccttca 22190038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 38513215 - 38513116
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatg--aagaaaaagttaagacaattcaa-cccccttcttatgtttt 119  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||||||||| |  ||||||||| ||| ||||||||| |||||||||| ||||||    
T  38513215 ttcagaagtagaactctatctgcttctgaactgcttgtttcag-ttaggagaaaaagaaaagaaaaagctaacacaattcaaccccccttcttgtgtttt 38513117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 8686244 - 8686333
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||  |||||  || ||||||| ||||||||||  || |||||||||||||||    
T  8686244 acatcacttcaaaagcagaactcaatctgcttctgatcagtgacttcag--taagagaaaacgaagaaaaagcaaacacaattcaaccccct 8686333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 20976756 - 20976643
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatg--aagaaaaagttaagacaattcaa--cccccttcttatgttt 118  Q
    |||| |||||||||||||||||||||||||| | |  |||||| ||||||||||| |  |||||||||  || |||||||||  |||||||||| |||||    
T  20976756 ttcaaaagtagaactctatctgcttctgaactgcttgtttcag-ttaggagaaaaagaaaagaaaaagcaaacacaattcaacccccccttcttgtgttt 20976658  T
Q  119 ttcacaccttcatat 133  Q
    ||| |||||||||||    
T  20976657 ttctcaccttcatat 20976643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 13929818 - 13929869
Alignment:
Q  83 aaaaagttaagacaattcaacccccttcttatgtttttcacaccttcatatt 134  Q
    |||||||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  13929818 aaaaagttaacacaattcaacccccttcttgtgtttttctcactttcatatt 13929869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 16852779 - 16852709
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||| ||||||||||||||||| ||||||||||||| |||| ||||||   |||||||||| ||||||||||    
T  16852779 acattacttcagaagtagaactttatctgcttctgatcagtattttca-aataggagaaaaagaagaaaaag 16852709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 40859963 - 40859900
Alignment:
Q  68 taggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtttttcacaccttca 130  Q
    |||||||||| |||||||||| ||| |||||||||| ||||||||| |||||||| ||||||||    
T  40859963 taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 40859900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 3500455 - 3500571
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgt-tttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    ||||| ||||||||||||||||||||||||||  || | |  | |||||| | ||||||||   ||||||||||||| ||||||||| |||||||||| |    
T  3500455 acatcccttcagaagtagaactctatctgctttcgacctgcttgtttcagat-aggagaaagaaaagaaaaagttaacacaattcaaccccccttcttgt 3500553  T
Q  115 gtttttcacaccttcata 132  Q
    ||||||| |||| |||||    
T  3500554 gtttttctcaccctcata 3500571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 9752351 - 9752381
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaac 54  Q
    |||||||||||||||||||||||||||||||    
T  9752351 ttcagaagtagaactctatctgcttctgaac 9752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 3394950 - 3394889
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaaga 83  Q
    |||||||||| | || ||||| |||||||||  |||||||| |||||||||||||| |||||    
T  3394950 acttcagaagcataattctatttgcttctgattagtgtttttagcttaggagaaaacgaaga 3394889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 17527237 - 17527294
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaaccc-ccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||| ||| |||||||||||| ||||||| |||||||| ||||||||    
T  17527237 aaaaagaagaaaaagctaacacaattcaacccgccttcttttgtttttctcaccttca 17527294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 21810746 - 21810795
Alignment:
Q  82 gaaaaagttaagacaattcaacccc-cttcttatgtttttcacaccttca 130  Q
    |||||||| || ||||||||||||| ||||||||||||||| ||||||||    
T  21810746 gaaaaagtcaacacaattcaaccccccttcttatgtttttctcaccttca 21810795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 55731137 - 55731084
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttag 70  Q
    |||||||||||||||||||| ||||||| ||| | | |||| ||||||||||||    
T  55731137 acatcacttcagaagtagaaatctatctactttttatcagtattttcagcttag 55731084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 932 - 817
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||| |    
T  932 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaaccccccttcttgt 833  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  832 gtttttctcaccttca 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 102866 - 102752
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattca--acccccttcttat 114  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||| |    
T  102866 acatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagttaatacaattcaacacccccttcttgt 102767  T
Q  115 gtttttcacaccttc 129  Q
    ||||||| |||||||    
T  102766 gtttttctcaccttc 102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 7976 - 7866
Alignment:
Q  21 cacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatgtttt 119  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccctcttcttatgtttt 7877  T
Q  120 tcacaccttca 130  Q
    || ||||||||    
T  7876 tctcaccttca 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 2e-36; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 45539331 - 45539445
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 45539430  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  45539431 tttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 25163375 - 25163260
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||    
T  25163375 acatcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttatg 25163276  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  25163275 tttttctcaccttcat 25163260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 30422277 - 30422391
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatg 115  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||| |||||| ||    
T  30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaattcaacccctcttcttgtg 30422376  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  30422377 tttttctcaccttca 30422391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 17541333 - 17541450
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  17541333 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccttctt 17541432  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  17541433 gtgtttttctcaccttca 17541450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 9319876 - 9319761
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||| | || ||||||||||  ||||||||| |    
T  9319876 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaataaaaaatcaacacaattcaacccccccttcttgt 9319777  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  9319776 gtttttctcaccttca 9319761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 17796721 - 17796631
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  17796721 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 17796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 16206535 - 16206464
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  16206535 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag 16206464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 18121980 - 18122083
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgt 116  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||  || ||||||||| |||||||||| |||    
T  18121980 catcacttcagaagtagaactctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgt 18122079  T
Q  117 tttt 120  Q
    ||||    
T  18122080 tttt 18122083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 19942539 - 19942426
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||  || | |||||||||||| |||||||     
T  19942539 acatcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaacataattcaacccccattcttata 19942441  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  19942440 tttttctcaccttca 19942426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 23264474 - 23264564
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  23264474 acatcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaattcaaccccc 23264564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 17007617 - 17007500
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| ||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||   || |||||||||| |||||||||    
T  17007617 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaacaaacacaattcaaccccccttctt 17007518  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  17007517 gtgtttttctcaccttca 17007500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 22673080 - 22672968
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| |||||||||||  |||||||||  || ||||||||||||||||||| |||    
T  22673080 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgt 22672982  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  22672981 ttttctcaccttca 22672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 23185593 - 23185703
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||   || |||||||||||||| | || |||    
T  23185593 acatcgcttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaattcaacccccct-ttgtgt 23185691  T
Q  117 ttttcacacctt 128  Q
    ||||| ||||||    
T  23185692 ttttctcacctt 23185703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 36104651 - 36104545
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||||||| ||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||  || ||||||||| ||||||||||    
T  36104651 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaaccccccttctt 36104553  T
Q  113 atgttttt 120  Q
     |||||||    
T  36104552 gtgttttt 36104545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 31445406 - 31445292
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  || |||||   || |||||||||||||| ||||| ||    
T  31445406 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaaaaaaaaaaaaaaaaaccaacacaattcaacccccattcttgtg 31445307  T
Q  116 tttttcacaccttca 130  Q
    |||||  ||||||||    
T  31445306 tttttgtcaccttca 31445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 19153331 - 19153238
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  19153331 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaataagctaacacaattcaaccccc 19153238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 43644185 - 43644072
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||  ||||||||||||||||||| |||||  |||||  ||||| |||||||| |||||| ||| ||||||||| |||||||||||||    
T  43644185 acatcacttcagaagctgaactctatctgcttctgatcagtgaattcag--taggaaaaaatgaaaaaaaagctaacacaattcaaccccccttcttatg 43644088  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  43644087 tttttctcaccttcat 43644072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 12758586 - 12758679
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||||| ||||| | |||||||| ||||||||| |||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  12758586 tggaaatcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaattcaaccccc 12758679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 18771997 - 18771889
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||| ||||||||| ||||||||| |||||||||||||||  |||||  |||||||| |||||||||||| ||| ||||||||||||||||| | |||    
T  18771997 acatcaattcagaagttgaactctatgtgcttctgaacagtgacttcag--taggagaagatgaagaaaaagctaacacaattcaacccccttc-tgtgt 18771901  T
Q  117 ttttcacacctt 128  Q
    ||||| ||||||    
T  18771900 ttttctcacctt 18771889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 6407054 - 6406947
Alignment:
Q  27 agaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatgtttttcacac 125  Q
    |||||||||||||||||||||||||| | || ||||||| ||||||||||| |||||||||   || |||||||||||||| ||||| |||||||| |||    
T  6407054 agaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaaaccaacacaattcaacccccattcttgtgtttttctcac 6406956  T
Q  126 cttcatatt 134  Q
    | |||||||    
T  6406955 catcatatt 6406947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 14990935 - 14991049
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttcttat 114  Q
    ||||| |||||||||||||||||||| ||||||||| | || ||||||| ||||||||||| ||||||||||  || ||||||||||||||   |||| |    
T  14990935 acatctcttcagaagtagaactctatatgcttctgacctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccgatcttgt 14991033  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  14991034 gtttttctcaccttca 14991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 15336934 - 15337024
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||| ||||||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||  || |||||||||| ||||    
T  15336934 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaactccct 15337024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 15425999 - 15426089
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||| ||||||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||  || |||||||||| ||||    
T  15425999 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaactccct 15426089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 15517303 - 15517393
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||| ||||||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||  || |||||||||| ||||    
T  15517303 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaactccct 15517393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 19706815 - 19706727
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||| ||||||||||||||||||| |||||  ||||   |||||||||| |||||||||| ||| ||||||||||||||    
T  19706815 acatcacttcagaagttgaactctatctgcttctgatcagtgacttca--ataggagaaaacgaagaaaaagctaacacaattcaaccccc 19706727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 21932180 - 21932097
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaatt 99  Q
    |||| ||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||| ||||||    
T  21932180 acattacttcagaagtggatctctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaatt 21932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 13431465 - 13431581
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaac-agtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||||| ||| | |  |||||| | || |||||| |||||||||| ||| ||||||||| |||||||||| |    
T  13431465 acatctcttcagaagtagaactctatctgcttctaaactacttgtttcagat-agaagaaaaagaagaaaaagctaacacaattcaaccccccttcttgt 13431563  T
Q  115 gtttttcacaccttcata 132  Q
    ||||||| ||||||||||    
T  13431564 gtttttctcaccttcata 13431581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 20383197 - 20383317
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||||| | |||| ||| |||||||||  |||||||||| |||||||||||| ||||||||||  |  ||||||||||  | ||||||| |    
T  20383197 acatcacttcagaagcataactttatttgcttctgattagtgttttcaacttaggagaaaacgaagaaaaagccatcacaattcaacctctccttcttgt 20383296  T
Q  115 gtttttcacaccttcatattc 135  Q
    ||||||| |||||| ||||||    
T  20383297 gtttttctcacctttatattc 20383317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 39692843 - 39692758
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc 104  Q
    |||| |||||||| |||||||||| || || ||| || ||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  39692843 atcatttcagaagcagaactctatttgtttatgatcaatgttttcagcttaggagaaaacgaagaaaaaattaacacaattcaacc 39692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 17442694 - 17442754
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||    
T  17442694 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcacaggagaaaa 17442754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 18676926 - 18676847
Alignment:
Q  52 aacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtttttcacaccttca 130  Q
    |||||||||| |||||||||||||  ||||||||||| ||| |||||||||| ||||||||| |||||||| ||||||||    
T  18676926 aacagtgtttccagcttaggagaatttgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 18676847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 16682097 - 16682171
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||| |||||||||||||  ||||| ||| ||||||||| || ||||||||||||||||||||| ||||||||||    
T  16682097 tggaaatcacttcagaagccgaactatatttgcttctgatcattgttttcagcttaggagaaaacgaagaaaaag 16682171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22662375 - 22662287
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||  | ||||||||||| ||||||||||  || |||||||||||||    
T  22662375 acatctcttcagaagtagaactctatctgcttctgatctgtatttt-tgtttaggagaaaaagaagaaaaagccaacacaattcaacccc 22662287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 29692620 - 29692564
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagctta 69  Q
    ||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  29692620 atggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagctta 29692564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35028324 - 35028384
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    ||||||||||| |||||||||| |||||| |||||| ||||||||||||||||| ||||||    
T  35028324 acatcacttcataagtagaactatatctgtttctgatcagtgttttcagcttagaagaaaa 35028384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 45292150 - 45292033
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatg--aagaaaaagttaagacaattcaa--cccccttct 111  Q
    ||||| |||||||||||||||| ||||||||||||||| | |  |||||| ||||||||||| |  ||||||||| ||| |||||||||  |||||||||    
T  45292150 acatctcttcagaagtagaactatatctgcttctgaactgcttgtttcag-ttaggagaaaaagaaaagaaaaagctaacacaattcaactcccccttct 45292052  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  45292051 tgtgtttttctcaccttca 45292033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 40846262 - 40846365
Alignment:
Q  29 aagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaat--gaagaaaaagttaagacaattcaa-cccccttcttatgtttttcacac 125  Q
    ||||| |||||||||||||||||| | || ||||||| |||||||||||   |||||||||| ||| ||||||||| |||||||||| | |||||| |||    
T  40846262 aagtataactctatctgcttctgatctgtattttcag-ttaggagaaaaaaagaagaaaaagctaacacaattcaaccccccttcttgtatttttctcac 40846360  T
Q  126 cttca 130  Q
    |||||    
T  40846361 cttca 40846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 16188556 - 16188484
Alignment:
Q  35 aactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||| |||||| ||||| ||||||||||||| |||| ||| |||||  ||| ||||||||||||||    
T  16188556 aactctatctgtttctgatcagtgctttcagcttaggaaaaaaagaataaaaaactaacacaattcaaccccc 16188484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 43773417 - 43773308
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatg--aagaaaaagttaagacaattcaa-cccccttcttatgtttt 119  Q
    ||||||||||||||| ||||||||||| ||| | |  |||||| ||||||||||| |  ||||||||| ||| ||||||||| |||||||||| ||||||    
T  43773417 ttcagaagtagaactttatctgcttctaaactgcttgtttcag-ttaggagaaaaagaaaagaaaaagctaacacaattcaaccccccttcttgtgtttt 43773319  T
Q  120 tcacaccttca 130  Q
    || ||||||||    
T  43773318 tctcaccttca 43773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 20256356 - 20256406
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttca 64  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  20256356 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 20256441 - 20256491
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttca 64  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  20256441 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 18152550 - 18152585
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctga 52  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18152550 acatctcttcagaagtagaactctatctgcttctga 18152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 27739121 - 27739070
Alignment:
Q  79 gaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    |||||||||| ||| ||||||||||||||||||| | |||||| ||||||||    
T  27739121 gaagaaaaagctaacacaattcaacccccttcttgtatttttctcaccttca 27739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 33561068 - 33561098
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaac 54  Q
    |||||||||||||||||||||||||||||||    
T  33561068 ttcagaagtagaactctatctgcttctgaac 33561098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 43639052 - 43638999
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||||||||||| ||||| |  ||||||| |||||||||||    
T  43639052 cttcagaagtagaactctatctgcttatgaactgcattttcag-ttaggagaaaa 43638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 1210604 - 1210661
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||| ||| ||||||||| |||||||||| |||||||| ||||||||    
T  1210604 aaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 1210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 9767963 - 9768012
Alignment:
Q  81 agaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  9767963 agaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 9768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 2e-36; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 6090039 - 6089925
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||| ||    
T  6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaattcaacctcccttcttgtg 6089940  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  6089939 tttttctcaccttca 6089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 52283106 - 52282991
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| || ||||||||||  ||||||||| |    
T  52283106 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaattcaacccccccttcttgt 52283007  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  52283006 gtttttctcaccttca 52282991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 12727082 - 12727196
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||| |||||||||||| ||||||| ||    
T  12727082 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagctaacacaattcaaccctccttcttgtg 12727181  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  12727182 tttttctcaccttca 12727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 14954721 - 14954607
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||| ||||||||| ||    
T  14954721 acattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 14954622  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  14954621 tttttctcaccttca 14954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 29952283 - 29952373
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  29952283 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 29952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 30001437 - 30001527
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  30001437 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 30001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 40799201 - 40799085
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc---cccttctta 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||||   ||||||||     
T  40799201 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccacccttcttg 40799102  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  40799101 tgtttttctcaccttca 40799085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 52919735 - 52919618
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||||| |||    
T  52919735 acatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcagcccccttcttgtgt 52919636  T
Q  117 ttttcacaccttcatatt 134  Q
    ||||| ||||||||||||    
T  52919635 ttttctcaccttcatatt 52919618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 15902509 - 15902393
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctta 113  Q
    |||| ||||||||||||| |||||| ||| ||| ||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||     
T  15902509 tggaaatcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccccttcttg 15902410  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  15902409 tgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 1241921 - 1242035
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatg 115  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||   || ||||||||||||| |||||| ||    
T  1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccccacttcttgtg 1242020  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  1242021 tttttctcaccttca 1242035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 20628308 - 20628398
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  20628308 acatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccccc 20628398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 14968680 - 14968591
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||||||    
T  14968680 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 14968591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 19889782 - 19889899
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||| |||||||||| ||| | ||||||| ||||||||||    
T  19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacaaaattcaaccccccttctt 19889881  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  19889882 gtgtttttctcaccttca 19889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 49554356 - 49554473
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||   || ||||||||| |||||||| | ||    
T  49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtgtg 49554455  T
Q  116 tttttcacaccttcatat 133  Q
    |||||| |||||||||||    
T  49554456 tttttctcaccttcatat 49554473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 38178491 - 38178595
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||    
T  38178491 acatcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccctccttcttatg 38178590  T
Q  116 ttttt 120  Q
    |||||    
T  38178591 ttttt 38178595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 14393841 - 14393958
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||  |||||||||| |    
T  14393841 acatcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacgcccccttcttgt 14393940  T
Q  115 gtttttcacaccttcata 132  Q
     |||||| ||||||||||    
T  14393941 atttttctcaccttcata 14393958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 19885924 - 19886038
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||| || ||    
T  19885924 acatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagataacacatttcaacccccctttttgtg 19886023  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  19886024 tttttctcaccttca 19886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 2560496 - 2560383
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||||| || |||||||||| ||||||||| ||    
T  2560496 acatcacttcaaaagtagaactctatctgcttcttatcagtgttttcggcttaggagaagacgaagaaaaagtaaacacaattcaaccccccttcttgtg 2560397  T
Q  116 tttttcacaccttc 129  Q
    |||||| |||||||    
T  2560396 tttttctcaccttc 2560383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 11189304 - 11189191
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||   || |||||||||| |||||||| |||    
T  11189304 acatcacttcataagtagaactctatcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaaccaacacaattcaacacccttcttgtgt 11189205  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  11189204 ttttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 11222859 - 11222753
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttagg---agaaaatgaagaaaaagttaagacaattcaacccccttctta 113  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||| ||||||||||||  || |||||||||||||||||||     
T  11222859 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacccccttcttg 11222760  T
Q  114 tgttttt 120  Q
    |||||||    
T  11222759 tgttttt 11222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 29854721 - 29854607
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||| ||| ||||||||||  ||||||||| |    
T  29854721 acatcacttcagatgtagaactctatctgcttctgatc-gtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgt 29854623  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  29854622 gtttttctcaccttca 29854607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 17667676 - 17667566
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttcttatgtttt 119  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||  ||||| ||||||    
T  17667676 acttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccgttcttttgtttt 17667577  T
Q  120 tcacaccttca 130  Q
    || ||||||||    
T  17667576 tctcaccttca 17667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 17239775 - 17239880
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    ||||||||||| ||| |||||||||| ||||| ||| || ||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  17239775 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccattcttatg 17239874  T
Q  116 tttttc 121  Q
    ||||||    
T  17239875 tttttc 17239880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22804867 - 22804980
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||  ||  ||||||||||  ||||||||| |    
T  22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaacta--acaattcaacctccccttcttgt 22804964  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  22804965 gtttttctcaccttca 22804980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 41494312 - 41494196
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatgt 116  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||| |||||| |||    
T  41494312 catcacttcagaaatagaactctatttacttctgatcagtgttttcagcttaggagaaaa-gaagaaaaagccaacacaattcaaccccgcttcttgtgt 41494214  T
Q  117 ttttcacaccttcatatt 134  Q
    ||| | ||||||||||||    
T  41494213 tttgctcaccttcatatt 41494196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 12963934 - 12964046
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatgtt 117  Q
    ||||||||  ||| |||||||||| ||||||| | |||||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||| ||||    
T  12963934 atcacttcgtaagcagaactctatttgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaagctaacacaattcaaccctccttcttgtgtt 12964033  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  12964034 tttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 18122494 - 18122584
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| | |||||||  ||| ||||||||||||||    
T  18122494 acatcacttcagaagtagaactctatctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaattcaaccccc 18122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 47206974 - 47206869
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||         |||||| ||| ||||||||||| |||||||||||    
T  47206974 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggag---------aaaaagctaacacaattcaacctcccttcttatg 47206884  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  47206883 tttttctcaccttca 47206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 49643607 - 49643727
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttct 111  Q
    |||| ||||||||| ||| |||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||  || |||||    
T  49643607 tggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacctccgcttct 49643706  T
Q  112 tatgtttttcacaccttcata 132  Q
    | |||||||| || |||||||    
T  49643707 tgtgtttttctcatcttcata 49643727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 25399101 - 25399205
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||  ||||||||||| || | ||||||| |||||||||| ||    
T  25399101 acatcacttcagaagtagaactctatctgcttctgattagtgttttcgacttaggagaaacagaagaaaaagtcaacataattcaaccccccttcttgtg 25399200  T
Q  116 ttttt 120  Q
    |||||    
T  25399201 ttttt 25399205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 31302657 - 31302557
Alignment:
Q  20 tcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgttt 118  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||   || |||||||||| ||||||||| |||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaaccccccttcttgtgttt 31302558  T
Q  119 t 119  Q
    |    
T  31302557 t 31302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 11222107 - 11222014
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttagg---agaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||| ||||||||||||  || ||||||||||||||    
T  11222107 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaaccccc 11222014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 21639128 - 21639237
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| ||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  21639128 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 21639226  T
Q  116 tttttcacacc 126  Q
    |||||| ||||    
T  21639227 tttttctcacc 21639237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 53057571 - 53057685
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    |||||||||||||||||||||||||||| |||||||  || ||||||||||||  ||||||  |||||||| | || |||||||||||||| ||||| ||    
T  53057571 acatcacttcagaagtagaactctatctacttctgattagagttttcagcttataagaaaaaaaagaaaaaatcaacacaattcaaccccctttcttgtg 53057670  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  53057671 tttttctcaccttca 53057685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 13823379 - 13823278
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtt 117  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||   || |||||||||| ||||||||| ||||    
T  13823379 atcacttcagaattagaactttatctgcttctgatcagtgttttcggcttaggagaaaaagaagaaaaatccaacacaattcaaccccccttcttgtgtt 13823280  T
Q  118 tt 119  Q
    ||    
T  13823279 tt 13823278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 50299549 - 50299431
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaaga----aaaagttaagacaattcaa-cccccttct 111  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||    ||||   || ||||||||| |||||||||    
T  50299549 acatcagttcagaagtagaaatctatctgcttctgatcagtgttttcaacttaggagaaaaagaagaaaagaaaaaaaaacacaattcaaccccccttct 50299450  T
Q  112 tatgtttttcacaccttca 130  Q
    |||||||||| ||||||||    
T  50299449 tatgtttttctcaccttca 50299431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 8874971 - 8875086
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc--ccttcttat 114  Q
    ||||||||||||||| | |||| ||| ||||||||| ||||||||||||||||||| |||| |||||||||   || ||||||||||||  ||||||| |    
T  8874971 acatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggaaaaaacgaagaaaaaaccaacacaattcaacccctccttcttgt 8875070  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  8875071 gtttttctcaccttca 8875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 47406263 - 47406366
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||         ||||||||| || |||||||||||||||||||||||    
T  47406263 acatcacttcacaagtagcactctatctccttctgatcagtgttttcagcttagg---------agaaaaagtcaacacaattcaacccccttcttatgt 47406353  T
Q  117 ttttcacaccttc 129  Q
    ||||| |||||||    
T  47406354 ttttctcaccttc 47406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 46797241 - 46797354
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| ||||||||||||||||||||||||||||||   || ||||||| ||||||||||| ||||||||| | || ||| ||||| |||||||||| ||    
T  46797241 acatctcttcagaagtagaactctatctgcttctgatttgtattttcag-ttaggagaaaaagaagaaaaaatcaacacagttcaaccccccttcttgtg 46797339  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  46797340 tttttctcaccttca 46797354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 16031814 - 16031701
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||  |||||||||||||||||| ||||||||||  |  ||||||||||| | |||||| ||    
T  16031814 acattacttcagaagtggaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaatcacaattcaacctctcttcttgtg 16031715  T
Q  116 tttttcacaccttc 129  Q
    |||||| |||||||    
T  16031714 tttttctcaccttc 16031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 46350687 - 46350772
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa 102  Q
    |||||| |||| |||||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||| || |||||||||    
T  46350687 acatcatttcaaaagtagaactctatctgcttctcatcagtattttcaacttaggagaaaaagaagaaaaagtcaacacaattcaa 46350772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 19250236 - 19250348
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatg 115  Q
    |||||||||||||||| ||||||||||||||| |||  ||||  |||||  |||||||||| |||| ||||| ||| ||||||||||||| |||||| ||    
T  19250236 acatcacttcagaagtggaactctatctgcttttgattagtgacttcag--taggagaaaacgaagtaaaagctaacacaattcaacccctcttcttgtg 19250333  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  19250334 tttttctcaccttca 19250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 2025397 - 2025293
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgtttttc 121  Q
    |||||||||||||||||||||||||||||||| |  ||||||| ||||||||||   |||||||||  || ||||||||| |||||||||| ||||||||    
T  2025397 cttcagaagtagaactctatctgcttctgaactgcattttcag-ttaggagaaa---aagaaaaagaaaacacaattcaaccccccttcttgtgtttttc 2025302  T
Q  122 acaccttca 130  Q
     ||||||||    
T  2025301 tcaccttca 2025293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 21640143 - 21640035
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttatgttttt 120  Q
    |||||||||||||||| ||||||||||||||| |  ||||||| ||  ||||||| ||||||||||| || |||||||||  |||||||||| |||||||    
T  21640143 cttcagaagtagaactttatctgcttctgaactgcattttcag-ttgtgagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgtgttttt 21640045  T
Q  121 cacaccttca 130  Q
    | ||||||||    
T  21640044 ctcaccttca 21640035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 2782797 - 2782705
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaa--atgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||  | |||||||||   || ||||||||||||||    
T  2782797 acatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaagaagaagaaaaaaccaacacaattcaaccccc 2782705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 13939210 - 13939117
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| |||| || ||||| |||| ||||| |||||||||  |||||||||||||||||||||||  ||||||||| ||| ||||||||||||||    
T  13939210 tggaaatcaatttagaagcagaaatctatttgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaaccccc 13939117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 40850289 - 40850174
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttctta 113  Q
    ||||| ||||||||||||||||||||| |||||||||| |   ||||||| ||||||||||| |||||||||  ||| ||||||||||||||  |||||     
T  40850289 acatctcttcagaagtagaactctatcggcttctgaactgcatttttcag-ttaggagaaaaagaagaaaaaactaacacaattcaaccccccgttcttg 40850191  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  40850190 tgtttttctcaccttca 40850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 2783187 - 2783127
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||    
T  2783187 acatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaa 2783127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 5212870 - 5212807
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||    
T  5212870 cttcagaagtagaactctatctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaa 5212807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 28581364 - 28581292
Alignment:
Q  59 ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatgtttttcacaccttca 130  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||| ||||||||    
T  28581364 ttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccccattcttgtgtttttctcaccttca 28581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 24776358 - 24776405
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttca 64  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  24776358 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 20645465 - 20645379
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac 103  Q
    ||||||||||||||| | || ||||| ||||| ||| ||||||||||| ||||| |||||| |||||||||| ||| ||||||||||    
T  20645465 acatcacttcagaagcaaaattctatttgcttttgatcagtgttttcaacttagaagaaaacgaagaaaaagctaacacaattcaac 20645379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 13781454 - 13781522
Alignment:
Q  39 ctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||| ||| |||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  13781454 ctatttgcttttgatcagtgtttccagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 13781522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 16881495 - 16881444
Alignment:
Q  79 gaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  16881495 gaagaaaaagttaaaacaattcaacccccttcttgtgtttttctcaccttca 16881444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 26418569 - 26418657
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||  |||||||||||||| | |||||||  |||||  |||||||||| ||||||||||  || ||||||||||||||    
T  26418569 acatcacttcagaagttcaactctatctgctttttaacagtgacttcag--taggagaaaacgaagaaaaagcaaacacaattcaaccccc 26418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 30055022 - 30055112
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||||| |   ||||||| ||||||||||| ||| |||||  ||| ||||||||||||||    
T  30055022 acatctcttcagaagtagaactctatctgcttctgaactgcatttttcag-ttaggagaaaaagaaaaaaaaactaacacaattcaaccccc 30055112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 33582530 - 33582415
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggag-aaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    |||||||||||||| ||||| ||||||| ||||| | ||||||||||| |||| ||| ||||  |||||||||  || ||||||||| |||||||||| |    
T  33582530 acatcacttcagaattagaaatctatctacttcttatcagtgttttcatcttatgagaaaaaaaaagaaaaagccaacacaattcaaccccccttcttgt 33582431  T
Q  115 gtttttcacaccttca 130  Q
    ||||||  ||||||||    
T  33582430 gtttttatcaccttca 33582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 49669338 - 49669435
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatgttttt 120  Q
    |||||||||||||||||||||||||||||| | ||  |||||  ||||||||||| |||||||||   || ||||||||||| |||||||| |||||||    
T  49669338 cttcagaagtagaactctatctgcttctgatctgtactttca-attaggagaaaaagaagaaaaaacgaacacaattcaacctcccttcttgtgttttt 49669435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 14310987 - 14310877
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatgtt 117  Q
    |||||||||||||  | ||||||||||||||||| ||||| ||||||  |||||||||| |||||||||   || ||||||||||| |||||||| | ||    
T  14310987 atcacttcagaagctggactctatctgcttctgatcagtgatttcag--taggagaaaacgaagaaaaataaaacacaattcaacctcccttcttgtatt 14310890  T
Q  118 tttcacaccttca 130  Q
    |||  ||||||||    
T  14310889 tttgtcaccttca 14310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 22465376 - 22465441
Alignment:
Q  67 ttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttcata 132  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  ||| |||||||| ||||||||||    
T  22465376 ttaggagaaaaggaagaaaaagctaacacaattcaaccccccccttgtgtttttctcaccttcata 22465441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 13698612 - 13698556
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||| ||| ||||||||||||| |||||||||||||| ||||||||    
T  13698612 aaaaagaagaaaaagctaacacaattcaaccccattcttatgtttttctcaccttca 13698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 3237977 - 3237891
Alignment:
Q  44 tgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtttttcacaccttca 130  Q
    ||||||| | |||| ||||||| |||| |||||||| |||||||| ||| |||||||||| ||||||||| |||||||| ||||||||    
T  3237977 tgcttctaatcagtcttttcag-ttagaagaaaatgtagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 3237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 16659434 - 16659477
Alignment:
Q  44 tgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  16659434 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa 16659477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14063939 - 14063999
Alignment:
Q  68 taggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacacctt 128  Q
    ||||||||||  ||||||| ||||| ||||||||||||| ||||| |||||||| ||||||    
T  14063939 taggagaaaacaaagaaaatgttaacacaattcaacccctttcttgtgtttttctcacctt 14063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 6252712 - 6252603
Alignment:
Q  20 tcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgttt 118  Q
    ||||||||||||  |||||||||||||||||||||||||  |||||  ||||||||    |||||||||  |  |||||||||| | ||||||| |||||    
T  6252712 tcacttcagaagctgaactctatctgcttctgaacagtgacttcag--taggagaa----aagaaaaagaaaccacaattcaactctccttcttgtgttt 6252619  T
Q  119 ttcacaccttcatatt 134  Q
    ||  ||||||||||||    
T  6252618 ttgtcaccttcatatt 6252603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 23539073 - 23539185
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||||| ||||||||  ||| ||||||||||| |||  ||||  ||||  |||||| |||| |||||||||  ||| ||||||||||| |||||||| ||    
T  23539073 acatcatttcagaagctgaattctatctgcttttgactagtgacttca--ttaggaaaaaacgaagaaaaaactaacacaattcaacctcccttcttgtg 23539170  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  23539171 tttttctcaccttca 23539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 14006915 - 14006877
Alignment:
Q  94 acaattcaacccccttcttatgtttttcacaccttcata 132  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  14006915 acaattcaacccccttcttgtgtttttctcaccttcata 14006877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 11073673 - 11073624
Alignment:
Q  81 agaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  11073673 agaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 11073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 6e-36; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 10631446 - 10631330
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||  || ||||| |    
T  10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccctccattcttgt 10631347  T
Q  115 gtttttcacaccttcat 131  Q
    ||||||| |||||||||    
T  10631346 gtttttctcaccttcat 10631330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 14101284 - 14101398
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| ||    
T  14101284 acatcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccctttcttgtg 14101383  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  14101384 tttttctcaccttca 14101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 32543572 - 32543458
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| ||    
T  32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaattcaaccctccttcttgtg 32543473  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  32543472 tttttctcaccttca 32543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 15532470 - 15532586
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc--cttcttat 114  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||  |||||| |    
T  15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccccttcttcttgt 15532569  T
Q  115 gtttttcacaccttcat 131  Q
    ||||||| |||||||||    
T  15532570 gtttttctcaccttcat 15532586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 17380872 - 17380756
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||  ||||||||| |    
T  17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgt 17380773  T
Q  115 gtttttcacaccttcat 131  Q
    ||||||| |||||||||    
T  17380772 gtttttctcaccttcat 17380756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 22801452 - 22801339
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||  ||||||||| ||| ||||||||||||||||||| |||    
T  22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaattcaacccccttcttgtgt 22801353  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  22801352 ttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 21624401 - 21624286
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||  ||||||||| |    
T  21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgt 21624302  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  21624301 gtttttctcaccttca 21624286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 15986671 - 15986556
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||| |||||||||||||| ||||||| ||||||||||| |||    
T  15986671 acatcacttcataagtagaactctatctgtttctgatcagtgtttttagcttaggtgaaaacgaagaaaaagttaatacaattcgacccccttcttgtgt 15986572  T
Q  117 ttttcacaccttcata 132  Q
    ||||| ||| ||||||    
T  15986571 ttttctcacattcata 15986556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 13435194 - 13435080
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||  || |||||||||| ||||||||| |     
T  13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtt 13435095  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  13435094 tttttctcaccttca 13435080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 15301531 - 15301413
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttct 111  Q
    ||||| ||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||    
T  15301531 atggaaatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttct 15301432  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||||||||    
T  15301431 tgtgtttttctcaccttca 15301413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 21234465 - 21234348
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttcttat 114  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||| ||| ||||||||||||||  ||||| |    
T  21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagctaacacaattcaaccccccattcttgt 21234366  T
Q  115 gtttttcacaccttcata 132  Q
     |||||| ||||||||||    
T  21234365 atttttctcaccttcata 21234348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 16528624 - 16528511
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||| ||| ||||||||||  ||||||||| |    
T  16528624 acatcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgt 16528525  T
Q  115 gtttttcacacctt 128  Q
    ||||||| ||||||    
T  16528524 gtttttctcacctt 16528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 18434819 - 18434729
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| || ||||||||||||||    
T  18434819 acatcacttcagaagtagaactctatctgcttctgattagtgtttccagctttggagaaaatgaagaaaaagtaaacacaattcaaccccc 18434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 19085440 - 19085326
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgt 116  Q
    |||||||||||||| |||||||||| ||||||| | |||||||||||||||| ||||||| ||||||||||  || |||||||||| ||||||||| |||    
T  19085440 catcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgt 19085341  T
Q  117 ttttcacaccttcat 131  Q
    |||||||||||||||    
T  19085340 ttttcacaccttcat 19085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 20113473 - 20113564
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaaca-gtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  20113473 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccccc 20113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 24717659 - 24717749
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa--tgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||  || ||||||||||||||    
T  24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaattcaaccccc 24717749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 13601479 - 13601361
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||| ||| || ||||||| |||||||||    
T  13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacacgattcaaccccccttctt 13601380  T
Q  113 atgtttttcacaccttcat 131  Q
     |||| ||| |||||||||    
T  13601379 gtgttattctcaccttcat 13601361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 9717135 - 9717020
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||| |||||||| |  || ||||||||||  ||||||||| |    
T  9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaacacaattcaacctccccttcttgt 9717036  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  9717035 gtttttctcaccttca 9717020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 20731546 - 20731630
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattca 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||| ||| ||||||||    
T  20731546 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaaggtaacacaattca 20731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 16333038 - 16332935
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| | || ||||||| ||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  16333038 acatcacttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 16332940  T
Q  116 ttttt 120  Q
    |||||    
T  16332939 ttttt 16332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 18377736 - 18377621
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    ||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||||||| ||||||||||  || ||||||||||  ||||||||| |    
T  18377736 acatcacttcagaagtagaactctatctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagccaacacaattcaacccccccttcttgt 18377637  T
Q  115 gtttttcacaccttca 130  Q
     |||||| ||||||||    
T  18377636 atttttcgcaccttca 18377621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 19688042 - 19687928
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc--cttcttat 114  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| | |||||||||| |||||||||   || |||||||||||||  |||||| |    
T  19688042 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcaacataggagaaaa-gaagaaaaaaccaacacaattcaaccccctcttcttgt 19687944  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  19687943 gtttttctcaccttca 19687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 19833829 - 19833943
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||||| || | ||||||||||||||||| |||||||||||| ||||||||||| || |||||||  || ||||||||| |||||||||| ||    
T  19833829 acatcacttcagaggtggtactctatctgcttctgatcagtgttttcag-ttaggagaaaaagatgaaaaagaaaacacaattcaaccccccttcttgtg 19833927  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  19833928 tttttctcaccttcat 19833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 14732952 - 14733045
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||||||||||||| | |||||||| || |||||| ||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||    
T  14732952 tggaaatcacttcagaagcataactctatttgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 14733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 25593383 - 25593268
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctta 113  Q
    |||| ||||||||| ||| | |||||||| ||||||||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||||||  |||     
T  25593383 tggaaatcacttcataagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa-ataacacaattcaaccccc-ccttg 25593286  T
Q  114 tgtttttcacaccttcat 131  Q
    |||||||| |||||||||    
T  25593285 tgtttttctcaccttcat 25593268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 21617562 - 21617471
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccctt 109  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||| ||  || ||||||||||||||||    
T  21617562 acatctcttcagaagtagaactctatctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaacagccaacacaattcaaccccctt 21617471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 33353093 - 33353199
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttca 122  Q
    |||||||||||||||||||||||||||||||| |  ||||||| |||  |||||| ||||||||||  || ||||||||||||||||| | ||||||||     
T  33353093 cttcagaagtagaactctatctgcttctgaactgcattttcag-ttacaagaaaaagaagaaaaagaaaacacaattcaacccccttcctgtgtttttct 33353191  T
Q  123 caccttca 130  Q
    ||||||||    
T  33353192 caccttca 33353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 19623296 - 19623206
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||  || | ||||||||||||    
T  19623296 acatcacttcagaagcaggactctatttgcttctgatcagtgtttttagcttaggagaaaacgaagaaaaagccaacataattcaaccccc 19623206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 17304106 - 17304194
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||  ||||||||||||||||||| |||||  |||||  |||||||||| |||||||||| ||| ||||||||||||||    
T  17304106 acatcacttcagaagctgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaaccccc 17304194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 26588903 - 26588794
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatg--aagaaaaagttaagacaattcaaccccc-ttcttatgtttt 119  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||||||||| |  ||||||||| ||| |||||||||||||| ||||| ||||||    
T  26588903 ttcagaagtagaactctatctgcttctgaactgcttgtttcag-ttaggagaaaaagaaaagaaaaagctaacacaattcaacccccattcttgtgtttt 26588805  T
Q  120 tcacaccttca 130  Q
    || ||||||||    
T  26588804 tctcaccttca 26588794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 7762947 - 7762866
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattc 100  Q
    |||||||||||||||  ||||||||||||||||||| ||||| ||||||  |||||||||| ||||||| || ||| |||||||    
T  7762947 acatcacttcagaagctgaactctatctgcttctgatcagtgatttcag--taggagaaaacgaagaaatagctaacacaattc 7762866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 24116127 - 24116055
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaag 88  Q
    |||| |||||||||| |||||||||| ||||||||| ||||||||| || |||||||||||| ||||||||||    
T  24116127 acattacttcagaagcagaactctatttgcttctgaccagtgtttttcaacttaggagaaaacgaagaaaaag 24116055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 29917347 - 29917238
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||| ||||||||| |||||||||||||||| || |||| || || ||||||||||||| ||||||||||  |  || |||||||||||  ||| |||    
T  29917347 acatcagttcagaagtggaactctatctgcttccgatcagtattgtcggcttaggagaaaaagaagaaaaagccaccacgattcaaccccc--cttgtgt 29917250  T
Q  117 ttttcacacctt 128  Q
    ||||| ||||||    
T  29917249 ttttctcacctt 29917238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 3680411 - 3680299
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    ||||||| |||||||  ||||||||||||||||||| ||||| ||||||  ||||| |||  |||||||||   || ||||||||||| |||||||| ||    
T  3680411 acatcacctcagaagctgaactctatctgcttctgatcagtgatttcag--taggataaatcgaagaaaaaacaaacacaattcaaccacccttcttgtg 3680314  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  3680313 tttttctcaccttca 3680299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 12041170 - 12041053
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttagg---agaaaatgaagaaaaagttaagacaattcaacc-cccttctt 112  Q
    ||||||||| |||||||||||||||||||||| ||| ||| ||||| | | ||||   |||| | ||||||||||| || ||||||||||| | ||||||    
T  12041170 acatcactttagaagtagaactctatctgcttttgatcagggttttaaacataggagaagaagaagaagaaaaagtcaacacaattcaaccactcttctt 12041071  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  12041070 gtgtttttctcaccttca 12041053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 19469938 - 19469850
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||| |||||||||||| |||||| |||||  |||||  ||||||||||  | ||||||| ||| ||||||||||||||    
T  19469938 acatcacttcagaagtggaactctatctgtttctgatcagtgacttcag--taggagaaaacaatgaaaaagctaacacaattcaaccccc 19469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 16876217 - 16876107
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||||||| |||||||||||| || |||| |||||||||||| ||| |||||||  ||||||||   || | ||||||||||||  ||| |||    
T  16876217 acatcacttcagaagcagaactctatctactcctgatcagtgttttcag-ttaagagaaaaataagaaaaaacaaacataattcaaccccc--cttgtgt 16876121  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  16876120 ttttctcaccttca 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 19952434 - 19952483
Alignment:
Q  25 tcagaagtagaactctatctgcttctgaacagtgttttcagcttaggaga 74  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  19952434 tcagaagtagaactctatctgcttctgattagtattttcagcttaggaga 19952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 22077211 - 22077302
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggag--aaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| |||||||  |||| ||||||||||  || | ||||||||||||    
T  22077211 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaaaagaagaaaaagccaacagaattcaaccccc 22077302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 29537901 - 29537817
Alignment:
Q  46 cttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttcttatgtttttcacacctt 128  Q
    |||||||  ||||||||||||||||||| ||| |||||||||  ||| |||||||||||  |||||||| |||||||| ||||||    
T  29537901 cttctgattagtgttttcagcttaggagtaaacgaagaaaaaactaacacaattcaaccatcccttcttgtgtttttctcacctt 29537817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 12422550 - 12422480
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    ||||| |||||||||||||||||| ||||||||| |   |||||||||| ||||||||||| ||||||||||    
T  12422550 acatctcttcagaagtagaactctttctgcttctaatatgtgttttcag-ttaggagaaaaagaagaaaaag 12422480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 19625068 - 19624970
Alignment:
Q  34 gaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtttttcacaccttcat 131  Q
    |||||||||| | |||||||  ||| |||||| ||||| ||||| |||||||||| ||| | |||||||| |||| |||| |||||||| |||||||||    
T  19625068 gaactctatcaggttctgaagtgtgatttcagtttaggtgaaaacgaagaaaaagctaacataattcaaccccccgtcttgtgtttttctcaccttcat 19624970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 12716283 - 12716356
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||| ||||||||||||| |||||| ||| || |||| |  ||||||||||||||||||||| | |||||||||    
T  12716283 tggaaatcacttcagaagcagaactatatttgtttcttattagtgttttcagcttaggagaagacgaagaaaaa 12716356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 19066854 - 19066960
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttctta 113  Q
    ||||| |||||||||||||||||||||||||||||| | | |  ||||||  |||||||||   ||||||||| ||| |||||||||  ||||||||||     
T  19066854 acatctcttcagaagtagaactctatctgcttctgacctgcttgtttcag-ataggagaaagaaaagaaaaagctaacacaattcaagccccccttcttg 19066952  T
Q  114 tgtttttc 121  Q
    ||||||||    
T  19066953 tgtttttc 19066960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 26941710 - 26941610
Alignment:
Q  20 tcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgttt 118  Q
    |||||||||||   ||||||||||||||||||| |||||  |||||  | | |||||| |||||||||| ||| |||||||||| ||| ||||| |||||    
T  26941710 tcacttcagaatctgaactctatctgcttctgatcagtgacttcag--tggaagaaaacgaagaaaaagctaacacaattcaactccctttcttgtgttt 26941613  T
Q  119 ttc 121  Q
    |||    
T  26941612 ttc 26941610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 17927050 - 17927012
Alignment:
Q  20 tcacttcagaagtagaactctatctgcttctgaacagtg 58  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  17927050 tcacatcagaagttgaactctatctgcttctgaacagtg 17927012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 24471261 - 24471318
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacc-cccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||||||| ||||||||||| | |||||| |||||||| ||||||||    
T  24471261 aaaaagaagaaaaagttaacacaattcaaccactcttcttgtgtttttctcaccttca 24471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 24481333 - 24481374
Alignment:
Q  80 aagaaaaagttaagacaattcaacccc-cttcttatgttttt 120  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24481333 aagaaaaagttaacacaattcaacccctcttcttatgttttt 24481374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 30372623 - 30372574
Alignment:
Q  80 aagaaaaagttaagacaattcaaccccc-ttcttatgtttttcacacctt 128  Q
    ||||||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  30372623 aagaaaaagttaacacaattcaaccccctttcttgtgtttttctcacctt 30372574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 9e-35; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 30742248 - 30742133
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||   |||||| ||||||||||| || ||||||||||||||||||| |||    
T  30742248 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagctttaaagaaaaagaagaaaaagtcaacacaattcaacccccttcttgtgt 30742149  T
Q  117 ttttcacaccttcata 132  Q
    ||||| ||||||||||    
T  30742148 ttttctcaccttcata 30742133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 6498623 - 6498511
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||| |||    
T  6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc-tcttgtgt 6498525  T
Q  117 ttttcacaccttca 130  Q
    ||| | ||||||||    
T  6498524 tttactcaccttca 6498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 7746524 - 7746614
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||||||||||||||    
T  7746524 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccccc 7746614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21100578 - 21100692
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||| ||    
T  21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccttcttgtg 21100677  T
Q  116 tttttcacaccttca 130  Q
     ||||| ||||||||    
T  21100678 cttttctcaccttca 21100692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 13546355 - 13546470
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||| || |||||||||||  | |||||| |    
T  13546355 acatcacttcagaagtagaactctatctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaattcaacccactcttcttgt 13546454  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  13546455 gtttttctcaccttca 13546470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 21076011 - 21076127
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||| ||| | |||||||||| ||||||| ||    
T  21076011 acatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaacataattcaaccctccttcttgtg 21076110  T
Q  116 tttttcacaccttcata 132  Q
    |||||| ||| ||||||    
T  21076111 tttttctcacattcata 21076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 37395476 - 37395362
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||| | ||||||||||| || |||||||||| ||||||||| ||    
T  37395476 acatcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaagtaaacacaattcaaccccccttcttgtg 37395377  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  37395376 tttttctcaccttca 37395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 9399440 - 9399556
Alignment:
Q  16 gacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttctta 113  Q
    ||||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||  ||| |||||||||||  || |||||     
T  9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccctcctttcttg 9399539  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  9399540 tgtttttctcaccttca 9399556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 22000855 - 22000972
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||| |||||||| | |||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||| ||    
T  22000855 acatcatttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaactcaaccccccttcttgtg 22000954  T
Q  116 tttttcacaccttcatat 133  Q
    |||||| |||||||||||    
T  22000955 tttttctcaccttcatat 22000972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 90261 - 90375
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatg 115  Q
    |||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| | ||||| ||    
T  90261 acatcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacctcattcttgtg 90360  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  90361 tttttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 12353691 - 12353781
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  12353691 acatcacttcataagtagaactttatctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaagttaacacaattcaaccccc 12353781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 31117184 - 31117094
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||| || || |||||||||||    
T  31117184 acatcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacactattcaaccccc 31117094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 31487517 - 31487403
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||   || |||||||||| ||||||||| ||    
T  31487517 acatcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtg 31487418  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  31487417 tttttctcaccttca 31487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 6513255 - 6513374
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc--ccttct 111  Q
    |||| ||||||||||||| |||||||||| ||||| ||| |||||||||||||||| ||||||| ||||||||||  || ||||||||||||  ||||||    
T  6513255 tggaaatcacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaattcaacccctccttct 6513354  T
Q  112 tatgtttttcacaccttcat 131  Q
    | |||||||| |||||||||    
T  6513355 tgtgtttttctcaccttcat 6513374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 13736934 - 13737021
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc 104  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||| |||||||||| ||| |||||||||||    
T  13736934 acatcacttcagaagtggaactctatctgtttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaacc 13737021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 21199846 - 21199953
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgttttt 120  Q
    ||||||||||| ||||||||||||||||||| |||||  |||||  |||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||    
T  21199846 acttcagaagttgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgttttt 21199943  T
Q  121 cacaccttca 130  Q
    | ||||||||    
T  21199944 ctcaccttca 21199953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 33021968 - 33021898
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  33021968 acatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaggagaaaaa 33021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 23413804 - 23413910
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||||||||| ||| |||||||||| | ||||||  |||||||||||||||||||||||| |||||||||| ||| |||||||||  |||| ||||| |    
T  23413804 acatcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaactccccattcttgt 23413903  T
Q  115 gtttttc 121  Q
    |||||||    
T  23413904 gtttttc 23413910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 33932576 - 33932470
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttat 114  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||  |||||||||  || ||||||||||  ||||||||| |    
T  33932576 acatcatttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaaagaaaaagccaacacaattcaacccccccttcttgt 33932477  T
Q  115 gtttttc 121  Q
    |||||||    
T  33932476 gtttttc 33932470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 3246291 - 3246403
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| |||||||||||||||||||||||||||||| | ||  |||||| ||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  3246291 acatctcttcagaagtagaactctatctgcttctgatctgt-atttcag-ttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 3246388  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  3246389 tttttctcaccttca 3246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 11993197 - 11993108
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||| || ||||||||||| ||||||||||  || ||||||||||||||    
T  11993197 acatcacttcagaagcagaactctatctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaattcaaccccc 11993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 26764779 - 26764690
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||||||| ||||||||||| ||||||||||| ||  |||||||||||||    
T  26764779 acatctcttcagaagtagaactctatctgcttctgatctatgttttcag-ttaggagaaaaagaagaaaaagtcaacgcaattcaaccccc 26764690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 28138907 - 28138788
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa------cccccttc 110  Q
    ||||| ||||||||||||||||||||||| |||||| | || ||||||| ||||||||||| ||||||||||| || |||||||||      ||||||||    
T  28138907 acatctcttcagaagtagaactctatctgtttctgatctgtattttcag-ttaggagaaaaagaagaaaaagtcaacacaattcaatcccaccccccttc 28138809  T
Q  111 ttatgtttttcacaccttcat 131  Q
    || |||||||| |||||||||    
T  28138808 ttgtgtttttctcaccttcat 28138788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 35932834 - 35932949
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttctta 113  Q
    ||||| |||||||||||||||||||||||||||||||| | |  ||||||  |||||||||| |||||||||| ||| ||||||||||  |||||||||     
T  35932834 acatctcttcagaagtagaactctatctgcttctgaactgcttatttcag-ataggagaaaaagaagaaaaagctaacacaattcaacctccccttcttg 35932932  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  35932933 tgtttttctcaccttca 35932949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 23880321 - 23880269
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagctta 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23880321 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 15516270 - 15516187
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||||||||||   |||| ||||| ||||||||||| ||||||||||  || ||||||||||||||    
T  15516270 cttcagaagtagaactctatctgcttctgatatgtgtcttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 15516187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 30116702 - 30116816
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||| ||||||||| |||||||||||||||||||| | || ||||||| ||||||||||| ||||||||||  || | |||| ||  |||||||||| |    
T  30116702 acatctcttcagaagcagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacagaatttaacccccccttcttgt 30116800  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  30116801 gtttttctcaccttca 30116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 31146431 - 31146526
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgt-tttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctt 112  Q
    ||||| ||| |||||||||||||||||||||||||||| |  | |||||| | ||||||||| |||||||||| ||| |||||||||||||||||||    
T  31146431 acatctctttagaagtagaactctatctgcttctgaactgcttgtttcagat-aggagaaaaagaagaaaaagctaacacaattcaacccccttctt 31146526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 42242916 - 42242856
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  42242916 acatcacttcataagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaa 42242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 10848073 - 10847996
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa 102  Q
    ||||||||||||||||||||||||||||||| |  ||||||| ||||||||||| |||||||||  ||| |||||||||    
T  10848073 ttcagaagtagaactctatctgcttctgaactgcattttcag-ttaggagaaaaagaagaaaaacctaacacaattcaa 10847996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 19546358 - 19546448
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||| | |||| ||| ||||||||| |||||| ||||||||||||| ||| |||||||||   || ||||||||||||||    
T  19546358 acatcacttcagaagcataactatatttgcttctgatcagtgtcttcagcttaggaggaaacgaagaaaaaaccaacacaattcaaccccc 19546448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 25097871 - 25097981
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||||||||||||||  ||| ||||||||||||||| ||||  ||||||  |||||||||| ||||||||||  || | ||||||||| |||||||| ||    
T  25097871 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag--taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtg 25097968  T
Q  116 tttttcacacctt 128  Q
    |||||| ||||||    
T  25097969 tttttctcacctt 25097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 25156963 - 25157073
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttatg 115  Q
    |||||||||||||||  ||| ||||||||||||||| ||||  ||||||  |||||||||| ||||||||||  || | ||||||||| |||||||| ||    
T  25156963 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag--taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtg 25157060  T
Q  116 tttttcacacctt 128  Q
    |||||| ||||||    
T  25157061 tttttctcacctt 25157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 28465177 - 28465289
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgttt 118  Q
    |||||||||||||||||||||||| |  || ||| | ||  |||||| |||||||||||  |||||||||  || ||||||||||||||||||| |||||    
T  28465177 atcacttcagaagtagaactctatatttttttgatctgtactttcag-ttaggagaaaaaaaagaaaaagccaacacaattcaacccccttcttgtgttt 28465275  T
Q  119 ttcacaccttcata 132  Q
    |||  |||||||||    
T  28465276 ttcttaccttcata 28465289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 26120704 - 26120760
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  26120704 aaaaagaagaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 26120760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 17814276 - 17814186
Alignment:
Q  13 atggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac 103  Q
    ||||| ||||||||||||| |||| | ||| |||||  || || |||||||||||||| |||||| |||||||||  ||| ||||||||||    
T  17814276 atggaaatcacttcagaagcagaattttatttgctttcgatcaatgttttcagcttagaagaaaacgaagaaaaaactaacacaattcaac 17814186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 643525 - 643585
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    ||||||||||| ||||||||||  ||||  |||| | ||||||||||||||||||||||||    
T  643525 acatcacttcaaaagtagaacttcatctatttctaatcagtgttttcagcttaggagaaaa 643585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 9088273 - 9088231
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaacagtgttttcag 65  Q
    |||||||||||||||||||||||||||||| | || |||||||    
T  9088273 cttcagaagtagaactctatctgcttctgatctgtattttcag 9088231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 16606790 - 16606700
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||| ||||||||  |||||||||  |  ||||||  |||||||||| ||||||||||| |||||||||   || ||||||||||||||    
T  16606790 acatcatttcagaagctgaactctatgaggctctgaagtgtgttttcagtttaggagaaaacgaagaaaaaaacaacacaattcaaccccc 16606700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 35987059 - 35987089
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaac 54  Q
    |||||||||||||||||||||||||||||||    
T  35987059 ttcagaagtagaactctatctgcttctgaac 35987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 2280 - 2166
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc-cttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  || ||||||||||||| |||||| ||    
T  2280 acatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccacttcttgtg 2181  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  2180 tttttctcaccttca 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 752 - 866
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||| |||||||||| ||    
T  752 acatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaattcaaccccccttcttgtg 851  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  852 tttttctcaccttca 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 6e-33; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 1899656 - 1899564
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccctt 109  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  1899656 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaaccccctt 1899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 29215107 - 29214995
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtt 117  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||  ||| |||||||||| ||||||||||||||    
T  29215107 atcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaactaatacaattcaacaccccttcttatgtt 29215008  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  29215007 tttctcaccttca 29214995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 14294052 - 14294164
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||  || |||||| |||||||||||| |||    
T  14294052 acatcactttagaagtataactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaatt-aacccccttcttgtgt 14294150  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  14294151 ttttctcaccttca 14294164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 38281672 - 38281556
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||||  || ||||| ||||||||||||| |||    
T  38281672 acatcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaatccaacccccttcttgtgt 38281573  T
Q  117 ttttca-caccttcata 132  Q
    |||| | ||||||||||    
T  38281572 tttttatcaccttcata 38281556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 2833965 - 2833874
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||||||||    
T  2833965 acatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccct 2833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 30892374 - 30892259
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||||||||| ||| |||||||||| ||||||||| ||    
T  30892374 acatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaagctaacacaattcaaccccccttcttgtg 30892275  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  30892274 tttttctcaccttcat 30892259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 1577158 - 1577044
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||||   || |||||||||| ||||||| ||||    
T  1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtatg 1577059  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  1577058 tttttctcaccttca 1577044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 22153135 - 22153021
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||||||||  || |||||||||| ||||||||| ||    
T  22153135 acatcacttcagaagtagaactctatctgcttctgatcaaagttttcagctaaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 22153036  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  22153035 tttttctcaccttca 22153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 22428108 - 22428194
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac 103  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  22428108 acatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaac 22428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 25449357 - 25449469
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| ||| ||  || ||||||||||||||||||| |||    
T  25449357 acatcacttcagaagtataactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaaaaaatagccaacacaattcaacccccttcttgtgt 25449455  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  25449456 ttttctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 22202648 - 22202764
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttctta 113  Q
    |||| ||||| ||||||| |||||||||| ||||| ||| |||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||| |||     
T  22202648 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaagataacacaattcaaccccctccttg 22202747  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  22202748 tgtttttctcaccttca 22202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 2266395 - 2266321
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagtta 91  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  2266395 acatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaaacgaagaaaaagtta 2266321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 12283700 - 12283586
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgttt 118  Q
    |||| |||||||| |||||||||  ||||| ||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||  ||||||| |||||    
T  12283700 atcatttcagaaggagaactctacttgcttatga-cagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacatccttcttgtgttt 12283602  T
Q  119 ttcacaccttcatatt 134  Q
    ||| ||||||||||||    
T  12283601 ttctcaccttcatatt 12283586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 23037293 - 23037411
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttcttat 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| ||||||||||  ||  |||||||||||||  ||||| |    
T  23037293 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttatgataaaaagaagaaaaagccaacccaattcaaccccccattcttgt 23037392  T
Q  115 g-tttttcacaccttcata 132  Q
    | |||||| ||||||||||    
T  23037393 gttttttctcaccttcata 23037411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 22600956 - 22601046
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||| ||||||||||| ||||||||||  || ||||||||||||||    
T  22600956 acatcacttcagaagtagaactctatctgattctgatcaatgttttcaggttaggagaaaaagaagaaaaagccaacacaattcaaccccc 22601046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 32786708 - 32786822
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||| ||| |||||  ||| ||||||||| |||||||||| ||    
T  32786708 acatcacttcagaagtggaactttatctgcttctgatcagtgtttacaacttaggagaaaaagaaaaaaaatctaacacaattcaaccccccttcttgtg 32786807  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  32786808 tttttctcaccttca 32786822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 20959819 - 20959911
Alignment:
Q  36 actctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||||||  ||| |||||||| ||||||||    
T  20959819 actctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaaccccc--cttgtgtttttctcaccttca 20959911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 48703558 - 48703447
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgttt 118  Q
    ||||| ||||||| | |||||||| || ||||||  ||||||||||||||| |||| || ||||||||| |||| |||||||||||||||| ||||||||    
T  48703558 atcacgtcagaagcaaaactctatttgtttctgataagtgttttcagcttaagagataaggaagaaaaaattaacacaattcaaccccctttttatgttt 48703459  T
Q  119 ttcacaccttca 130  Q
    ||| ||||||||    
T  48703458 ttctcaccttca 48703447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22465582 - 22465696
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||   || ||||||| |||||||||||||||||||| ||| ||| ||||||| || ||||||||| |||||||||| |     
T  22465582 acatcacttcagaagtagaactccgcctacttctgatcagtgttttcagcttaggagtaaacgaataaaaagtaaacacaattcaaccccccttcttgta 22465681  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  22465682 tttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 7309099 - 7308984
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||| ||||| |||| ||||| ||||||||| |||||||||||| ||||||||||| |||||||||   || ||||||||| |||||||||| ||    
T  7309099 acatcactttagaagcagaattctatttgcttctgatcagtgttttcag-ttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtg 7309001  T
Q  116 tttttcacaccttcata 132  Q
    |||||| ||||||||||    
T  7309000 tttttctcaccttcata 7308984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 33257135 - 33257243
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| ||||||||| ||| | |||| ||| ||||||||| | |||||||||||||||||||||  |||||||||| ||| |||||||||| |||||||||    
T  33257135 tggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaattcaactccccttctt 33257234  T
Q  113 atgtttttc 121  Q
     ||||||||    
T  33257235 gtgtttttc 33257243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 33277307 - 33277415
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| ||||||||| ||| | |||| ||| ||||||||| | |||||||||||||||||||||  |||||||||| ||| |||||||||| |||||||||    
T  33277307 tggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaattcaactccccttctt 33277406  T
Q  113 atgtttttc 121  Q
     ||||||||    
T  33277407 gtgtttttc 33277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 36133520 - 36133430
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||| ||||| |||||||||  ||| ||| |||||||||||||||| ||||||| ||||||||||  || ||||||||||||||    
T  36133520 acatcacttcataagtaaaactctatcgacttatgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaaccccc 36133430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 48571022 - 48571135
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    ||||| ||| ||||||||||||||||||| |||| | | || ||||||| ||||||||||| ||||||||| | || |||||||||||||| ||||| ||    
T  48571022 acatctctttagaagtagaactctatctgtttctaatctgtattttcag-ttaggagaaaaagaagaaaaaatcaacacaattcaacccccattcttgtg 48571120  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  48571121 tttttctcaccttca 48571135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 14264198 - 14264286
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||   |||||||||  || ||||||||||||||    
T  14264198 acatcacttcagaagtagaattctatctgcttttgatcagtgtttttcagcttaggagaaa---aagaaaaagaaaacacaattcaaccccc 14264286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 21983908 - 21983793
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttctta 113  Q
    ||||| |||||||||||||||||||||||||||||||| | |  ||||||  |||||||||| ||||||||||  || ||||||||||||||  |||||     
T  21983908 acatctcttcagaagtagaactctatctgcttctgaactgcttatttcag-ataggagaaaaagaagaaaaagaaaacacaattcaaccccccgttcttg 21983810  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  21983809 tgtttttctcaccttca 21983793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 12625318 - 12625431
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    |||||||||||||||| |||||||||||||||||||  ||||  || |   |||||||||| |||||||||  ||| |||||||||||| ||||||| ||    
T  12625318 acatcacttcagaagttgaactctatctgcttctgatgagtgactttaa--taggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtg 12625415  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  12625416 tttttctcaccttcat 12625431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 28493092 - 28493180
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||| |||||||||| ||||| ||| | ||||||||| |||||||||| | |||||||||  ||| ||||||||||||||    
T  28493092 atcacttcagaagcagaactctatttgcttatgatctgtgttttcaccttaggagaagacgaagaaaaaactaacacaattcaaccccc 28493180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 21205629 - 21205716
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| ||||| ||||||||||||||||||||||||||  ||  ||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  21205629 acatctcttcaaaagtagaactctatctgcttctgaac--tgcattcag-ttaggagaaaaagaagaaaaagctaacacaattcaaccccc 21205716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 21215444 - 21215531
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| ||||| ||||||||||||||||||||||||||  ||  ||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  21215444 acatctcttcaaaagtagaactctatctgcttctgaac--tgcattcag-ttaggagaaaaagaagaaaaagctaacacaattcaaccccc 21215531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 44824523 - 44824625
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| ||||||||||||||||  |||||||||||| | |||||||||| ||||||||||| |||||||| |  || ||||||||| |||||||||| ||    
T  44824523 acatctcttcagaagtagaactacatctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaggccaacacaattcaaccccccttcttgtg 44824621  T
Q  116 tttt 119  Q
    ||||    
T  44824622 tttt 44824625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 21135927 - 21136016
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    ||||| ||||||||||||||||| |||||||||||||| |   ||||||| ||||||||||| |||||||||| ||| |||||||||||||    
T  21135927 acatctcttcagaagtagaactcgatctgcttctgaactgcatttttcag-ttaggagaaaaagaagaaaaagctaacacaattcaacccc 21136016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 22202526 - 22202600
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaag 88  Q
    |||| ||||| ||||||| |||||||||| ||||| ||| |||||||||||| ||||||||||| ||||||||||    
T  22202526 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaag 22202600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 19214913 - 19214829
Alignment:
Q  23 cttcagaagtagaactctatctgcttctgaac-agtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| |||||||| |||||||||||||||||| |||||||||||  |||||||||| ||||||||||  || ||||||||||||||    
T  19214913 cttctgaagtagatctctatctgcttctgaacaagtgttttcag-ataggagaaaaagaagaaaaagcaaacacaattcaaccccc 19214829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21192654 - 21192767
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||| ||||||||||  ||||||||||||||| ||| |||||  |||||  |||||||||| |||||||||| | | |||||||||  |||||||||| |    
T  21192654 acatgacttcagaagctgaactctatctgcttatgatcagtgacttcag--taggagaaaacgaagaaaaagcttacacaattcaacccccccttcttgt 21192751  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  21192752 gtttttcgcaccttca 21192767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 46088294 - 46088198
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatgttttt 120  Q
    |||||||||||||||||||||| |||||||| |  ||||||| ||||||||||| | |||||||  ||| |||||||||||| ||||||| |||||||    
T  46088294 ttcagaagtagaactctatctgattctgaactgcattttcag-ttaggagaaaaaggagaaaaacctaacacaattcaaccctccttcttgtgttttt 46088198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 30571511 - 30571421
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    ||||| ||||||||||||||||||| |||||||||| | || ||||||| ||||||||||| |||||||| |  || |||||| ||||||||    
T  30571511 acatctcttcagaagtagaactctacctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaatgccaacacaatttaaccccct 30571421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 16233946 - 16234004
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttcata 132  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  16233946 aaaaagaagaaaaagctaacacaattcaacctccttcttatgtttttctcaccttcata 16234004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 10756742 - 10756654
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc 105  Q
    |||||||| ||||||||||| | ||| | ||||| | ||||||||||| ||||| |||||| |||||||||  ||| ||||||||||||    
T  10756742 acatcactccagaagtagaattttatatacttctaatcagtgttttcaacttagaagaaaacgaagaaaaaactaacacaattcaaccc 10756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 17025772 - 17025884
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||||||| |||| | ||||||||||||||||||| |||||  || ||  ||||||||||  ||||||||  ||| ||||||||| |||||||||| ||    
T  17025772 acatcactttagaaattgaactctatctgcttctgatcagtgacttaag--taggagaaaacaaagaaaaatctaacacaattcaaccccccttcttgtg 17025869  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||| ||||    
T  17025870 tttttctcactttca 17025884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 25398725 - 25398671
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacacctt 128  Q
    |||| ||||||||| |||| ||||||||||||||||||| |||||||| ||||||    
T  25398725 aaaaagaagaaaaaattaacacaattcaacccccttcttgtgtttttctcacctt 25398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 42283890 - 42283840
Alignment:
Q  80 aagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  42283890 aagaaaaagttaacacacttcaacccccttcttgtgtttttctcaccttca 42283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 18614221 - 18614135
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc 105  Q
    ||||||| |||||||  ||||||||||||||| ||| |||||  |||||  |||||||||| |||||||||| ||| | ||||||||||    
T  18614221 acatcacatcagaagctgaactctatctgcttttgatcagtgacttcag--taggagaaaacgaagaaaaagctaacataattcaaccc 18614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 10250302 - 10250190
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| ||| |||||||||||||||| ||||| ||| | || ||||||| ||||||||||| |||||||||   || |||||||| |||    ||| |||    
T  10250302 acatctctttagaagtagaactctatatgcttttgatctgtattttcag-ttaggagaaaaagaagaaaaaaccaacacaattcacccc----cttgtgt 10250208  T
Q  117 ttttcacaccttcatatt 134  Q
    ||||| ||||||||||||    
T  10250207 ttttctcaccttcatatt 10250190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 23053628 - 23053576
Alignment:
Q  79 gaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttcat 131  Q
    |||||||||  ||| ||||||||||||||||||| |||||||| |||||||||    
T  23053628 gaagaaaaaactaaaacaattcaacccccttcttgtgtttttctcaccttcat 23053576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 37640313 - 37640208
Alignment:
Q  24 ttcagaagtagaactctatctgcttctgaacagtgt-tttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc--ttcttatgttttt 120  Q
    ||||||||||||||||||||||||||| ||  |  | |||||| |||| ||||||   |||||||| ||| ||||||||||||||  |||||||||||||    
T  37640313 ttcagaagtagaactctatctgcttctaaattgcttgtttcag-ttagaagaaaa---agaaaaagataacacaattcaacccccccttcttatgttttt 37640218  T
Q  121 cacaccttca 130  Q
    | ||||||||    
T  37640217 ctcaccttca 37640208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 2820096 - 2820153
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaacc-cccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||  ||| ||||||||||| ||||||||||||||||| ||||||||    
T  2820096 aaaaagaagaaaaaactaacacaattcaacctcccttcttatgtttttctcaccttca 2820153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 27858038 - 27857981
Alignment:
Q  74 aaaatgaagaaaaagttaagacaattcaaccc-ccttcttatgtttttcacaccttca 130  Q
    |||| |||||||||| ||| |||||||||||| ||||||| |||||||| ||||||||    
T  27858038 aaaaagaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca 27857981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 9277 - 9186
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccct 108  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  9277 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccct 9186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 25739 - 25649
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  25739 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaaccccc 25649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 211671 - 211546
Alignment:
Q  17 acatcacttcagaa-gtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttctta 113  Q
    |||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||| ||| |||||| ||| |||||||||  ||||||||||     
T  211671 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttg 211572  T
Q  114 tgtttttcacaccttcatattctact 139  Q
    |||||||| |||||||| ||||||||    
T  211571 tgtttttctcaccttcaaattctact 211546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 2767 - 2651
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||||||| ||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||  || ||||||||| ||||||||||    
T  2767 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaaccccccttctt 2669  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  2668 gtgtttttctcaccttca 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 7509 - 7612
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||  || ||||||||| |||||||||| ||    
T  7509 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtg 7607  T
Q  116 ttttt 120  Q
    |||||    
T  7608 ttttt 7612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 6 - 95
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc 106  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||| ||||||||||| || |||||||||||||    
T  6 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaacccc 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 14425 - 14320
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    ||||||||||| ||| |||||||||| ||||| ||| || ||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  14425 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccattcttatg 14326  T
Q  116 tttttc 121  Q
    ||||||    
T  14325 tttttc 14320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20267 - 20376
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgttt 118  Q
    ||||||||||||| |||||||||| | ||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||||||||||| |||||    
T  20267 atcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccccttcttttgttt 20366  T
Q  119 ttcacacctt 128  Q
    ||| ||||||    
T  20367 ttctcacctt 20376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 110392 - 110481
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| ||||||||||| |||||||||   || ||||||||||||||    
T  110392 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaacgaagaaaaaaccaacacaattcaaccccc 110481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 210715 - 210603
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| |||||||||||  |||||||||  || ||||||||||||||||||| |||    
T  210715 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgt 210617  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  210616 ttttctcaccttca 210603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 219547 - 219436
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatgtt 117  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||| |||||  ||| |||||||||||||| ||||||| ||    
T  219547 atcacttcagaagtggaactctatctg-ttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaagtaacacaattcaaccccctttcttatatt 219449  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  219448 tttctcaccttca 219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 378348 - 378466
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccc--cttct 111  Q
    |||| ||||||||||||| |||||||||| |||||||||  ||||||||||| ||||||||||| |||||||||| ||| |||||||||||||  |||||    
T  378348 tggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaattcaaccccttcttct 378447  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| ||| ||||    
T  378448 tgtgtttttctcactttca 378466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 2816 - 2904
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  2816 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 2904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 6524 - 6639
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||| ||||||||||  || |||||||||  |||||||||| |    
T  6524 acatcacttcagaagtagaactctatctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaaacacaattcaacccccccttcttgt 6623  T
Q  115 gtttttcacaccttca 130  Q
    ||||| | ||||||||    
T  6624 gttttcctcaccttca 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 19454 - 19569
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||| || ||||||| ||||||||||  || |||||||||  |||||||||| |    
T  19454 acatcacgtcagaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaattcaacccccccttcttgt 19553  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  19554 gtttttctcaccttca 19569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 24576 - 24690
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatg 115  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||  || | |||||||||||| ||||||||    
T  24576 acatcacttcagaagtagagctctatctgcttctgattagtgttttcag-ttaggagaaaaagaagaaagagcaaacataattcaacccccattcttatg 24674  T
Q  116 tttttcacaccttcat 131  Q
    |||||| |||||||||    
T  24675 tttttctcaccttcat 24690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 80651 - 80571
Alignment:
Q  38 tctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgttttt 120  Q
    ||||||||| ||||| |||||  |||||  |||||||||| |||||||||| ||| |||||| |||||||||||| |||||||    
T  80651 tctatctgcatctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaatttaacccccttcttgtgttttt 80571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 9209 - 9098
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgt 116  Q
    ||||||||||||||| || | ||||| ||||||||| |||||||||||||||||||||||| |||||||||| | | ||||||||||||||  ||| |||    
T  9209 acatcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcttacacaattcaaccccc--cttgtgt 9112  T
Q  117 ttttcacaccttca 130  Q
    ||||| ||||||||    
T  9111 ttttctcaccttca 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 111400 - 111490
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||  || ||||||||||||||    
T  111400 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaattcaaccccc 111490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 7193 - 7076
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttctt 112  Q
    |||| ||||||| ||||| | |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||| | | ||||| ||||||||||    
T  7193 tggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaataagaaaaagttaacagagttcaaccccccttctt 7094  T
Q  113 atgtttttcacaccttca 130  Q
     |||||||| ||||||||    
T  7093 gtgtttttctcaccttca 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 36738 - 36626
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtt 117  Q
    ||||||||||||  |||||| ||| ||||| |||  ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||| ||||    
T  36738 atcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtt 36639  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  36638 tttctcaccttca 36626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 134798 - 134686
Alignment:
Q  19 atcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttatgtt 117  Q
    ||||||||||||  |||||| ||| ||||| |||  ||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||| ||||    
T  134798 atcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtt 134699  T
Q  118 tttcacaccttca 130  Q
    |||| ||||||||    
T  134698 tttctcaccttca 134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 158457 - 158390
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaa 84  Q
    |||||||||||||||| ||||||||||||||||| |  |||| ||||||||||||| |||| ||||||    
T  158457 acatcacttcagaagtggaactctatctgcttctaataagtgatttcagcttaggataaaacgaagaa 158390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 10907 - 10998
Alignment:
Q  17 acatcacttcagaagtagaactctatctgctt-ctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||| |||||||||| ||| |||||  |||||||    
T  10907 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaatataaccccc 10998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 15571 - 15662
Alignment:
Q  17 acatcacttcagaagtagaactctatctgctt-ctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||| |||||||||| ||| |||||  |||||||    
T  15571 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaatataaccccc 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 48630 - 48512
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttct 111  Q
    |||| ||||||||| ||| | ||||||||  |||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||  ||||||||    
T  48630 tggaaatcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaagctaacacaattcaacccccccttct 48531  T
Q  112 tatgtttttcacaccttca 130  Q
    | |||||||| | ||||||    
T  48530 tgtgtttttctctccttca 48512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 31903 - 31785
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttctt 112  Q
    |||| |||| || ||||| |||||| ||| ||||||||| ||||||||  |||||||||||||| |||||||||| ||| |||||||||| |||||||||    
T  31903 tggaaatcaatttagaagcagaactttatttgcttctgatcagtgtttcaagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttctt 31804  T
Q  113 atgtttttcacaccttcat 131  Q
     |||||||| |||||||||    
T  31803 gtgtttttctcaccttcat 31785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 13303 - 13191
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    |||||||||||||||| ||||||||||||||||||| |||||  |||||  |||||||||| |||||||||| ||| ||||||||| ||||||| || ||    
T  13303 acatcacttcagaagttgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaacccccctttttgtg 13206  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  13205 tttttctcaccttca 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 83672 - 83586
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa 102  Q
    |||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||| |||||||||    
T  83672 acataacttcagaagtggaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaa 83586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 83579 - 83489
Alignment:
Q  46 cttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaacccccttcttatgtttttcacaccttcatattc 135  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| | ||||| |||||||| |||||||| ||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacctcattcttgtgtttttctcaccttcacattc 83489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 88398 - 88515
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgt-tttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||||||||| |  | |||||| | || | |||| |||||||||||||| ||||||||| |||||||||| |    
T  88398 acatctcttcagaagtagaactctatctgcttctgaactgcttgtttcagttaagaaaaaaaagaagaaaaagttaacacaattcaaccccccttcttgt 88497  T
Q  115 gtttttcacaccttcata 132  Q
    ||||||| ||||||||||    
T  88498 gtttttctcaccttcata 88515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 3483 - 3572
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||| | || ||||||| ||||||||||| ||||||||||  || ||||||||||||||    
T  3483 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagaaaacacaattcaaccccc 3572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 23937 - 23824
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    ||||| |||||||||||||| ||||||||||||||| | || ||||||| ||||||||||| |||||||||   || |||||||||||| ||||||| ||    
T  23937 acatctcttcagaagtagaattctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaaaccaacacaattcaaccctccttcttgtg 23839  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  23838 tttttctcaccttca 23824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 16292 - 16207
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| |||||| ||||||||||||||||||| ||||  |||||||||||||||||| ||||||| || ||| ||||||||||||||    
T  16292 actttagaagtggaactctatctgcttctgatcagtaatttcagcttaggagaaaacgaagaaatagctaacacaattcaaccccc 16207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 17642 - 17550
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaa--atgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||  | ||||||||||  || ||||||| ||||||    
T  17642 acatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaagaagaagaaaaagccaacacaattcgaccccc 17550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 7142 - 7035
Alignment:
Q  16 gacatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc--cccttctt 112  Q
    ||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||  ||||||| |||||||||| ||| ||||||||| |  ||||||||    
T  7142 gacatcacttcagaagtggaacactatctgcttctgatcagtgtttttcagcttccgagaaaaagaagaaaaagctaacacaattcaaacatcccttctt 7043  T
Q  113 atgttttt 120  Q
     |||||||    
T  7042 gtgttttt 7035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 2586 - 2674
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||  |||||||||| ||||||||||  || ||||||||||||||    
T  2586 acatcacttcagaagctgaactctatctgcttctgaacagtgacttcag--taggagaaaacgaagaaaaagcaaacacaattcaaccccc 2674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21735 - 21849
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatg 115  Q
    ||||| ||| |||||||||||| ||| ||||| ||| ||||||||||| ||||  |||||| ||||||||||  || ||||||||| |||||||||| ||    
T  21735 acatctctttagaagtagaactttatttgcttatgatcagtgttttcaacttaaaagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtg 21834  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  21835 tttttctcaccttca 21849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 11510 - 11394
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttat 114  Q
    ||||| |||||||||| ||||| ||||||||||||||| | | ||||||| ||||||||||| |||||||||  ||| ||||||||| |||||||||| |    
T  11510 acatctcttcagaagtggaactttatctgcttctgaactgcttttttcag-ttaggagaaaaagaagaaaaaactaacacaattcaaccccccttcttgt 11412  T
Q  115 gtttttcacaccttcata 132  Q
    ||||||| || |||||||    
T  11411 gtttttctcaacttcata 11394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 26449 - 26564
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttctta 113  Q
    ||||| ||||||||||| ||||||||||| |||||||| |  |||| ||| ||||||||||| |||||||||| ||| |||||||||  ||||||||||     
T  26449 acatctcttcagaagtataactctatctgtttctgaactgcatttttcag-ttaggagaaaaagaagaaaaagctaacacaattcaacccccccttcttg 26547  T
Q  114 tgtttttcacaccttca 130  Q
    |||||||| ||||||||    
T  26548 tgtttttctcaccttca 26564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 35543 - 35633
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||||||||||||||||||||| |   ||||||| ||||||||||| |||||||||| ||| |||||||| |||||    
T  35543 acatctcttcagaagtagaactctatctgcttctgaactgcatttttcag-ttaggagaaaaagaagaaaaagctaacacaattcacccccc 35633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 73835 - 73737
Alignment:
Q  22 acttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa-cccccttcttatgttttt 120  Q
    ||||||||||| ||||||||||||||| ||| ||||| ||||||  |||||||||| ||||||||||| || | ||||||| |||||||||| |||||||    
T  73835 acttcagaagttgaactctatctgcttttgatcagtgatttcag--taggagaaaacgaagaaaaagtaaacaaaattcaatcccccttcttgtgttttt 73738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 491 - 575
Alignment:
Q  37 ctctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc-ttcttatgttttt 120  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||   ||  ||||||||||||| ||||| |||||||    
T  491 ctctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaactcaattcaacccccattcttgtgttttt 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 729 - 845
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg-ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaacc-cccttcttat 114  Q
    |||||| ||||||||| ||||  ||||||||||||| ||||| ||||||||||||||||||| ||||||||||  || | ||||||||| |||||||| |    
T  729 acatcagttcagaagtggaacattatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacataattcaacctcccttcttgt 828  T
Q  115 gt-ttttcacaccttca 130  Q
    || ||||| ||||||||    
T  829 gtcttttctcaccttca 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22956 - 23069
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttat 114  Q
    ||||| |||||||||||||||||||||||||| ||| | || ||||||| ||||||||||| |||| |||||  || |||||||||  |||||||||| |    
T  22956 acatctcttcagaagtagaactctatctgcttttgatctgtattttcag-ttaggagaaaaagaag-aaaagccaacacaattcaacccccccttcttgt 23053  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  23054 gtttttctcaccttca 23069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 18347 - 18256
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgtttt-cagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||||||||||||||| ||||  ||||||||  ||| ||||||||| ||||||||||||||| ||||||||||  || ||||||||||||||    
T  18347 acatcacttcagaagtggaacattatctgctcttgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccc 18256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 59902 - 59962
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaa 77  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  59902 acatcacttcagaagtagaactctatctacttctgatcagtgttttcaacataggagaaaa 59962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 45975 - 45931
Alignment:
Q  21 cacttcagaagtagaactctatctgcttctgaacagtgttttcag 65  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||    
T  45975 cacttctgaagtagaactttatctgcttctgaacagtattttcag 45931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 63646 - 63603
Alignment:
Q  21 cacttcagaagtagaactctatctgcttctgaacagtgttttca 64  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||    
T  63646 cacttctgaagtagaactttatctacttctgaacagtgttttca 63603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 18559 - 18672
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc-ccttcttatg 115  Q
    ||||| |||||||||||||||||||||| ||||||||| |  ||||||| ||||||||||| |||| ||||   || | |||||||||| ||||||| ||    
T  18559 acatctcttcagaagtagaactctatctacttctgaactgcattttcag-ttaggagaaaaagaagcaaaaacaaacataattcaaccctccttcttgtg 18657  T
Q  116 tttttcacaccttca 130  Q
    |||||| ||||||||    
T  18658 tttttctcaccttca 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 66206 - 66294
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    |||| ||| |||||||||||||||||||||||||| | |  ||||||| ||||||||||| ||||||||||  || ||||||||||||||    
T  66206 catctctttagaagtagaactctatctgcttctgatctgcattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 66294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 145249 - 145363
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccc---ccttcttat 114  Q
    |||| |||||||||||||||||||||||||||||| |    ||||||| |||| |||||| ||||||||||  || ||||||||||||   ||||||| |    
T  145249 catctcttcagaagtagaactctatctgcttctgatctacattttcag-ttagaagaaaaagaagaaaaagccaacacaattcaaccccatccttcttgt 145347  T
Q  115 gtttttcacaccttca 130  Q
    ||||||| ||||||||    
T  145348 gtttttctcaccttca 145363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 79159 - 79207
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcag 65  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  79159 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcag 79207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 5483 - 5372
Alignment:
Q  17 acatcacttcagaagtagaactctatctgctt-ctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac-ccccttcttat 114  Q
    |||||||||||||||  ||||||||||| ||| |||| ||||| ||||||  || |||| || |||||||||| ||| |||||||||| ||||||||| |    
T  5483 acatcacttcagaagctgaactctatcttctttctgatcagtgatttcag--tatgagataacgaagaaaaagctaacacaattcaaccccccttcttgt 5386  T
Q  115 gtttttcacacctt 128  Q
    ||||||| ||||||    
T  5385 gtttttctcacctt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 4998 - 4883
Alignment:
Q  18 catcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaac--ccccttcttatg 115  Q
    ||||||||||||||  ||| | ||||| ||||||| |||||  |||||  |||||||||| ||  |||||||||| ||||||||||  ||||||||| ||    
T  4998 catcacttcagaagctgaattatatctccttctgatcagtgacttcag--taggagaaaacgac-aaaaagttaacacaattcaactcccccttcttgtg 4902  T
Q  116 tttttcacaccttcatatt 134  Q
    |||||| ||||||||||||    
T  4901 tttttctcaccttcatatt 4883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 1617 - 1737
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacag-tgttttcagcttagga-gaaa--atgaagaaaaagttaagacaattcaa--cccccttc 110  Q
    ||||| |||||||||||||||||||||||||||||||| | |  |||||| |||||| ||||  || ||||||||  ||| |||||||||  ||||||||    
T  1617 acatctcttcagaagtagaactctatctgcttctgaactgcttgtttcag-ttaggatgaaaagattaagaaaaacctaacacaattcaacccccccttc 1715  T
Q  111 ttatgtttttcacaccttcata 132  Q
    || |||||||| ||||||||||    
T  1716 ttgtgtttttctcaccttcata 1737  T

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Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 44665 - 44745
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaatt 99  Q
    ||||||||| || ||| ||||||||||||||| ||| ||||| ||||||  |||||||||| |||||||||| ||| ||||||    
T  44665 acatcactttagcagtggaactctatctgcttttgatcagtgatttcag--taggagaaaacgaagaaaaagctaacacaatt 44745  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 5443 - 5354
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| ||||| |||||||||||||||||||||||| |  | ||||||| |||||| |||| ||||||||||  || ||||||||| ||||    
T  5443 acatctcttcaaaagtagaactctatctgcttctgatctatattttcag-ttaggataaaaagaagaaaaagccaacacaattcaaacccc 5354  T

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Target: scaffold0247 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 16514 - 16602
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||| |||||||||||||| | ||||||||||||| | || ||||||| ||||||||||| ||||||||||  || | ||||||||||||    
T  16514 acatctcttcagaagtagaattttatctgcttctgatctgt-ttttcag-ttaggagaaaaagaagaaaaaggcaacaaaattcaaccccc 16602  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 50553 - 50480
Alignment:
Q  59 ttttcagcttaggagaaaatgaagaaaaagttaagacaattcaa--cccccttcttatgtttttcacaccttca 130  Q
    ||||||||||||||||||| |||||||||  ||| | |||||||  |||||||||| |||||||| ||||||||    
T  50553 ttttcagcttaggagaaaacgaagaaaaaactaacataattcaactcccccttcttgtgtttttctcaccttca 50480  T

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Target: scaffold1294 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 2080 - 2039
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtg 58  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  2080 acatcacttcagaagtggaactctatctgcttctgatcagtg 2039  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 14281 - 14208
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||| |||||||||||||  ||||||||| ||||||||| |||| |||| ||||||||||| || ||| |||||    
T  14281 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 14208  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 1323 - 1250
Alignment:
Q  14 tggacatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaa 87  Q
    |||| |||||||||||||  ||||||||| ||||||||| |||| |||| ||||||||||| || ||| |||||    
T  1323 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 1250  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 2870 - 2958
Alignment:
Q  17 acatcacttcagaagtagaactctatctgcttctgaacagtgttttcagcttaggagaaaatgaagaaaaagttaagacaattcaaccccc 107  Q
    ||||||| |||||||| ||| | ||||||||| | | |||||  |||||  |||||||||| |||||||||| ||| ||||||||||||||    
T  2870 acatcacctcagaagttgaattatatctgcttattatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaaccccc 2958  T

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Target: scaffold0525 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 7103 - 7054
Alignment:
Q  81 agaaaaagttaagacaattcaacccccttcttatgtttttcacaccttca 130  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  7103 agaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 7054  T

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