View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6900_high_26 (Length: 294)
Name: NF6900_high_26
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6900_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 24260127 - 24260388
Alignment:
| Q |
23 |
tggtgttggtttggtgaagcaggttctgagtggttcacaaataggcaaggaagagtatgacgttttgaaggatttcattgtaccgcttggtcgagcacct |
122 |
Q |
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| T |
24260127 |
tggtgttggtttggtgaagcaggttctgagtggttcacaaataggcaaggaagagtatgacgttttgaaggatttcattgtaccgcttggtcgagcacct |
24260226 |
T |
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| Q |
123 |
catttctcttctcagagtggagcttgacaacattgaatttccatcataaatgggcaaaagcttgaacttaatcaaacacgtataggacttttaatcatga |
222 |
Q |
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| T |
24260227 |
catttctcttctcagagtggagcttgacaacattgaatttccatcataaatgggcaaaagcttgaacttaatcaaacacgtataggacttttaatcatga |
24260326 |
T |
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| Q |
223 |
acacaatgttacctttctcttttaccttcaaagcattggagtgttgagtaaatatgttcatc |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24260327 |
acacaatgttacctttctcttttaccttcaaagcattggagtgttgagtaaatatgttcatc |
24260388 |
T |
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