View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6900_low_12 (Length: 563)

Name: NF6900_low_12
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6900_low_12
NF6900_low_12
[»] chr7 (53 HSPs)
chr7 (10-562)||(44465804-44466356)
chr7 (1-90)||(16557483-16557573)
chr7 (1-90)||(16608089-16608179)
chr7 (1-92)||(4493737-4493829)
chr7 (1-68)||(16546210-16546277)
chr7 (1-68)||(16619385-16619452)
chr7 (4-90)||(33604099-33604186)
chr7 (4-90)||(10884046-10884133)
chr7 (1-68)||(15467133-15467200)
chr7 (1-68)||(35954784-35954851)
chr7 (1-91)||(12175207-12175297)
chr7 (1-90)||(13027824-13027914)
chr7 (1-90)||(21691617-21691709)
chr7 (1-62)||(28623226-28623287)
chr7 (1-92)||(2499221-2499313)
chr7 (1-92)||(11792063-11792155)
chr7 (1-90)||(14186880-14186971)
chr7 (1-90)||(22580127-22580218)
chr7 (1-90)||(30025128-30025219)
chr7 (1-92)||(13473360-13473450)
chr7 (1-67)||(19328883-19328949)
chr7 (1-90)||(13138798-13138889)
chr7 (1-92)||(21284247-21284339)
chr7 (2-89)||(41843296-41843384)
chr7 (1-68)||(13879361-13879428)
chr7 (7-92)||(13259322-13259408)
chr7 (4-95)||(16315413-16315506)
chr7 (1-90)||(8182153-8182241)
chr7 (4-69)||(15705370-15705434)
chr7 (1-62)||(48237708-48237769)
chr7 (4-95)||(12367633-12367725)
chr7 (4-68)||(13645669-13645733)
chr7 (4-68)||(13731552-13731616)
chr7 (4-88)||(13261551-13261636)
chr7 (1-93)||(15087742-15087838)
chr7 (5-62)||(33420979-33421035)
chr7 (40-92)||(3779534-3779586)
chr7 (1-60)||(23280848-23280908)
chr7 (6-90)||(11318589-11318675)
chr7 (1-68)||(14424525-14424592)
chr7 (1-68)||(15574481-15574547)
chr7 (4-62)||(2914532-2914589)
chr7 (1-47)||(13034726-13034772)
chr7 (4-62)||(13302085-13302143)
chr7 (4-59)||(5001738-5001793)
chr7 (1-90)||(9710707-9710797)
chr7 (27-90)||(1292247-1292312)
chr7 (4-46)||(9069000-9069042)
chr7 (44-90)||(9761886-9761932)
chr7 (3-49)||(16911752-16911798)
chr7 (27-93)||(48063709-48063775)
chr7 (4-49)||(16317472-16317517)
chr7 (43-91)||(22727224-22727272)
[»] chr4 (34 HSPs)
chr4 (1-90)||(44397403-44397492)
chr4 (1-90)||(22676386-22676475)
chr4 (1-90)||(29120560-29120651)
chr4 (1-90)||(3792527-3792616)
chr4 (4-90)||(12599948-12600035)
chr4 (1-68)||(14905151-14905218)
chr4 (1-90)||(14605732-14605823)
chr4 (1-90)||(24628723-24628814)
chr4 (1-86)||(54679058-54679144)
chr4 (1-88)||(56033722-56033811)
chr4 (4-67)||(10072107-10072170)
chr4 (1-67)||(23749743-23749809)
chr4 (1-90)||(37436356-37436445)
chr4 (4-90)||(16631631-16631719)
chr4 (1-69)||(55379527-55379595)
chr4 (1-68)||(19883909-19883976)
chr4 (1-47)||(17246847-17246893)
chr4 (4-90)||(29681346-29681432)
chr4 (4-91)||(10071692-10071784)
chr4 (1-68)||(6516701-6516767)
chr4 (4-90)||(19611201-19611288)
chr4 (28-90)||(40859900-40859963)
chr4 (27-92)||(3106267-3106331)
chr4 (4-87)||(15134915-15134999)
chr4 (4-68)||(19621819-19621883)
chr4 (1-90)||(13576974-13577064)
chr4 (34-92)||(13890028-13890087)
chr4 (27-91)||(17399531-17399597)
chr4 (19-90)||(23120732-23120802)
chr4 (28-90)||(41115665-41115728)
chr4 (4-62)||(37986442-37986500)
chr4 (42-90)||(21810746-21810795)
chr4 (35-92)||(9752407-9752466)
chr4 (27-90)||(15560463-15560527)
[»] chr3 (57 HSPs)
chr3 (1-90)||(14954607-14954697)
chr3 (1-69)||(13823289-13823357)
chr3 (1-90)||(1241945-1242035)
chr3 (8-90)||(15902393-15902475)
chr3 (1-62)||(14968595-14968656)
chr3 (1-92)||(49554380-49554472)
chr3 (1-90)||(52282991-52283082)
chr3 (1-90)||(38178515-38178606)
chr3 (1-90)||(11189191-11189280)
chr3 (1-69)||(31302568-31302636)
chr3 (1-68)||(29952307-29952374)
chr3 (1-68)||(30001461-30001528)
chr3 (1-92)||(52919620-52919711)
chr3 (1-90)||(6089925-6090015)
chr3 (1-90)||(12727106-12727196)
chr3 (1-67)||(20628332-20628398)
chr3 (1-90)||(40799085-40799177)
chr3 (1-89)||(2560383-2560472)
chr3 (6-92)||(14393870-14393958)
chr3 (1-90)||(11222742-11222835)
chr3 (4-90)||(19889812-19889899)
chr3 (6-92)||(41494198-41494284)
chr3 (1-86)||(21639152-21639237)
chr3 (4-90)||(8874998-8875086)
chr3 (4-90)||(17667566-17667654)
chr3 (1-68)||(11222013-11222083)
chr3 (4-68)||(13939116-13939180)
chr3 (1-69)||(25399125-25399193)
chr3 (1-90)||(29854607-29854697)
chr3 (4-90)||(12963959-12964046)
chr3 (27-94)||(22465376-22465443)
chr3 (6-90)||(28581292-28581378)
chr3 (4-62)||(49643637-49643695)
chr3 (4-84)||(17239802-17239883)
chr3 (1-62)||(46350711-46350772)
chr3 (1-90)||(50299431-50299525)
chr3 (4-68)||(13781459-13781523)
chr3 (1-68)||(18122518-18122585)
chr3 (4-90)||(19885951-19886038)
chr3 (1-90)||(33582415-33582506)
chr3 (1-68)||(2782704-2782773)
chr3 (36-90)||(11073624-11073678)
chr3 (4-90)||(16659434-16659521)
chr3 (1-38)||(47206913-47206950)
chr3 (1-62)||(2783100-2783163)
chr3 (34-90)||(13698556-13698612)
chr3 (41-89)||(47406318-47406366)
chr3 (4-62)||(16031729-16031787)
chr3 (4-62)||(20645380-20645438)
chr3 (1-47)||(22804891-22804937)
chr3 (27-90)||(40850174-40850239)
chr3 (1-90)||(46797265-46797354)
chr3 (1-90)||(53057595-53057685)
chr3 (1-38)||(47406287-47406324)
chr3 (34-90)||(13410965-13411021)
chr3 (28-68)||(16199943-16199983)
chr3 (28-68)||(22140227-22140267)
[»] chr6 (32 HSPs)
chr6 (1-90)||(21624286-21624377)
chr6 (4-91)||(17380756-17380845)
chr6 (1-92)||(21234348-21234441)
chr6 (1-90)||(13435080-13435170)
chr6 (1-91)||(10631330-10631422)
chr6 (1-90)||(22801339-22801428)
chr6 (4-90)||(15301413-15301500)
chr6 (1-90)||(32543458-32543548)
chr6 (4-91)||(13601361-13601449)
chr6 (1-90)||(14101308-14101398)
chr6 (4-91)||(15532497-15532586)
chr6 (1-90)||(18377621-18377712)
chr6 (4-91)||(19085326-19085414)
chr6 (1-70)||(24717681-24717752)
chr6 (1-91)||(19833853-19833943)
chr6 (1-88)||(16528511-16528600)
chr6 (1-90)||(9717020-9717111)
chr6 (1-69)||(16332947-16333014)
chr6 (4-68)||(19623205-19623269)
chr6 (1-68)||(20113497-20113565)
chr6 (1-69)||(29917255-29917323)
chr6 (4-91)||(25593268-25593353)
chr6 (1-67)||(21617473-21617538)
chr6 (7-67)||(14732985-14733045)
chr6 (1-90)||(19687928-19688018)
chr6 (1-61)||(20731570-20731630)
chr6 (1-92)||(15986556-15986647)
chr6 (1-68)||(18434728-18434795)
chr6 (2-60)||(12422468-12422525)
chr6 (9-90)||(16876107-16876185)
chr6 (6-88)||(29537817-29537901)
chr6 (1-68)||(17304130-17304195)
[»] chr8 (36 HSPs)
chr8 (4-91)||(25163260-25163348)
chr8 (1-68)||(17796630-17796697)
chr8 (1-90)||(45539355-45539445)
chr8 (1-88)||(23185617-23185703)
chr8 (4-90)||(30422304-30422391)
chr8 (1-90)||(22672968-22673056)
chr8 (1-69)||(18122003-18122071)
chr8 (4-90)||(17007500-17007587)
chr8 (4-90)||(17541363-17541450)
chr8 (1-68)||(23264498-23264565)
chr8 (1-90)||(19942426-19942515)
chr8 (1-54)||(16206458-16206511)
chr8 (1-90)||(9319761-9319852)
chr8 (1-67)||(31445316-31445382)
chr8 (4-68)||(12758616-12758680)
chr8 (4-68)||(19153237-19153301)
chr8 (1-69)||(36104557-36104624)
chr8 (1-59)||(21932097-21932156)
chr8 (27-90)||(14990984-14991049)
chr8 (1-90)||(40846274-40846365)
chr8 (1-92)||(6406949-6407040)
chr8 (35-90)||(27739070-27739125)
chr8 (4-62)||(20383224-20383282)
chr8 (32-92)||(13431520-13431581)
chr8 (1-62)||(15336958-15337018)
chr8 (1-62)||(15426023-15426083)
chr8 (1-62)||(15517327-15517387)
chr8 (1-90)||(16188462-16188550)
chr8 (34-90)||(17287067-17287124)
chr8 (1-62)||(22662291-22662351)
chr8 (1-91)||(43644072-43644161)
chr8 (34-90)||(1210604-1210661)
chr8 (4-49)||(16682127-16682172)
chr8 (4-68)||(17442721-17442786)
chr8 (14-90)||(18676847-18676924)
chr8 (41-92)||(22212179-22212231)
[»] scaffold0315 (1 HSPs)
scaffold0315 (1-90)||(7866-7956)
[»] chr2 (40 HSPs)
chr2 (1-90)||(45087812-45087902)
chr2 (1-90)||(22188922-22189013)
chr2 (4-90)||(28702042-28702129)
chr2 (1-91)||(39038455-39038546)
chr2 (1-90)||(24851487-24851577)
chr2 (4-90)||(24778525-24778613)
chr2 (1-90)||(22455774-22455865)
chr2 (1-89)||(25188600-25188687)
chr2 (1-91)||(38780590-38780681)
chr2 (1-62)||(13964798-13964859)
chr2 (4-88)||(20569567-20569652)
chr2 (1-69)||(31801700-31801768)
chr2 (4-90)||(6391861-6391948)
chr2 (4-90)||(40780504-40780591)
chr2 (4-86)||(10010568-10010649)
chr2 (4-62)||(24575256-24575314)
chr2 (10-90)||(17964127-17964208)
chr2 (1-62)||(28712521-28712582)
chr2 (1-91)||(21538002-21538093)
chr2 (7-90)||(27294685-27294770)
chr2 (4-87)||(25828352-25828436)
chr2 (42-90)||(28790128-28790176)
chr2 (1-56)||(23234183-23234238)
chr2 (1-90)||(31328789-31328878)
chr2 (1-90)||(31335510-31335599)
chr2 (1-38)||(6574979-6575016)
chr2 (31-91)||(28551765-28551826)
chr2 (27-90)||(1587874-1587938)
chr2 (1-49)||(20152809-20152857)
chr2 (4-68)||(38630967-38631031)
chr2 (28-90)||(22782473-22782536)
chr2 (28-90)||(22786497-22786562)
chr2 (28-90)||(23185172-23185233)
chr2 (28-90)||(23596435-23596496)
chr2 (28-92)||(16494539-16494604)
chr2 (40-92)||(19539645-19539698)
chr2 (1-92)||(41122495-41122585)
chr2 (34-90)||(7687290-7687346)
chr2 (42-90)||(42255626-42255674)
chr2 (27-90)||(44839629-44839692)
[»] chr1 (34 HSPs)
chr1 (1-67)||(2833875-2833941)
chr1 (1-90)||(1577044-1577134)
chr1 (1-67)||(1899566-1899632)
chr1 (1-90)||(22153021-22153111)
chr1 (1-90)||(29214995-29215085)
chr1 (1-90)||(25449381-25449469)
chr1 (1-90)||(20959824-20959911)
chr1 (4-92)||(7308984-7309072)
chr1 (1-90)||(14294076-14294164)
chr1 (4-91)||(30892259-30892347)
chr1 (1-92)||(38281556-38281648)
chr1 (1-68)||(22600980-22601047)
chr1 (1-68)||(23037317-23037384)
chr1 (1-90)||(32786732-32786822)
chr1 (10-68)||(36133429-36133487)
chr1 (1-62)||(22428132-22428193)
chr1 (6-90)||(22465611-22465696)
chr1 (1-69)||(44824547-44824614)
chr1 (14-92)||(12283588-12283666)
chr1 (4-90)||(22202678-22202764)
chr1 (34-92)||(16233946-16234004)
chr1 (4-62)||(33257165-33257223)
chr1 (4-62)||(33277337-33277395)
chr1 (1-48)||(2266324-2266371)
chr1 (4-90)||(28493117-28493201)
chr1 (7-90)||(48703447-48703530)
chr1 (27-68)||(21121871-21121912)
chr1 (27-68)||(21205676-21205717)
chr1 (27-68)||(21215491-21215532)
chr1 (28-90)||(21983793-21983857)
chr1 (27-92)||(10250192-10250253)
chr1 (28-68)||(19214828-19214868)
chr1 (3-59)||(30571430-30571485)
chr1 (27-90)||(48571071-48571135)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-90)||(817-908)
[»] chr5 (33 HSPs)
chr5 (1-92)||(30742133-30742224)
chr5 (4-90)||(31487403-31487490)
chr5 (1-90)||(6498511-6498599)
chr5 (4-92)||(22000882-22000971)
chr5 (1-69)||(7746548-7746616)
chr5 (4-68)||(33932485-33932549)
chr5 (1-90)||(21100602-21100692)
chr5 (1-90)||(37395362-37395452)
chr5 (4-91)||(6513285-6513374)
chr5 (27-93)||(28465224-28465290)
chr5 (1-62)||(13736958-13737019)
chr5 (1-93)||(21076035-21076128)
chr5 (1-90)||(9399465-9399556)
chr5 (4-90)||(90288-90375)
chr5 (1-90)||(33021845-33021944)
chr5 (1-69)||(12353715-12353783)
chr5 (1-69)||(15516185-15516252)
chr5 (4-68)||(19546385-19546449)
chr5 (6-62)||(23413833-23413889)
chr5 (1-90)||(30116726-30116816)
chr5 (1-68)||(11993107-11993173)
chr5 (1-90)||(21199865-21199953)
chr5 (1-62)||(13546379-13546440)
chr5 (34-95)||(26120704-26120765)
chr5 (27-90)||(3246339-3246403)
chr5 (1-68)||(26764689-26764755)
chr5 (1-68)||(31117093-31117160)
chr5 (4-38)||(42242855-42242889)
chr5 (40-94)||(9088170-9088226)
chr5 (1-62)||(28138823-28138883)
chr5 (28-90)||(35932885-35932949)
chr5 (43-90)||(24495383-24495431)
chr5 (28-72)||(31146482-31146526)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-90)||(776-866)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-90)||(210603-210691)
scaffold0004 (7-90)||(219436-219520)
scaffold0004 (4-62)||(378378-378436)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-69)||(7533-7600)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-90)||(211555-211646)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-68)||(111424-111491)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-90)||(7076-7163)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-90)||(2166-2256)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-67)||(9187-9253)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-90)||(2651-2740)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1-67)||(495-561)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-90)||(6548-6639)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-90)||(19478-19569)
[»] scaffold0084 (2 HSPs)
scaffold0084 (4-91)||(31785-31873)
scaffold0084 (5-90)||(48512-48599)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-64)||(83584-83648)
scaffold0009 (6-90)||(83494-83579)
[»] scaffold0567 (1 HSPs)
scaffold0567 (4-90)||(9098-9182)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-90)||(36626-36713)
scaffold0022 (4-90)||(134686-134773)
[»] scaffold0530 (1 HSPs)
scaffold0530 (4-68)||(2841-2905)
[»] scaffold0163 (1 HSPs)
scaffold0163 (4-68)||(25648-25712)
[»] scaffold0115 (1 HSPs)
scaffold0115 (4-60)||(17557-17615)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-91)||(24600-24690)
[»] scaffold0275 (1 HSPs)
scaffold0275 (1-90)||(23824-23913)
[»] scaffold0035 (2 HSPs)
scaffold0035 (6-88)||(20294-20376)
scaffold0035 (1-68)||(110416-110482)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-89)||(102752-102842)
[»] scaffold0146 (1 HSPs)
scaffold0146 (4-84)||(14317-14398)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-64)||(7053-7117)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-68)||(5353-5419)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-68)||(16206-16273)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-68)||(66229-66295)
scaffold0011 (27-90)||(145297-145363)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-62)||(753-815)
scaffold0217 (1-68)||(18255-18323)
scaffold0217 (1-90)||(22980-23069)
[»] scaffold0056 (1 HSPs)
scaffold0056 (27-90)||(26499-26564)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-62)||(30-91)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-68)||(3507-3573)
[»] scaffold0161 (2 HSPs)
scaffold0161 (7-58)||(10938-10989)
scaffold0161 (7-58)||(15602-15653)
[»] scaffold0116 (1 HSPs)
scaffold0116 (4-90)||(21762-21849)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-90)||(13191-13279)
[»] scaffold0488 (1 HSPs)
scaffold0488 (27-92)||(11394-11460)
[»] scaffold1747 (1 HSPs)
scaffold1747 (28-90)||(517-581)
[»] scaffold1745 (1 HSPs)
scaffold1745 (28-90)||(830-894)
[»] scaffold0758 (1 HSPs)
scaffold0758 (34-90)||(3513-3568)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-90)||(16538-16627)


Alignment Details
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 10 - 562
Target Start/End: Complemental strand, 44466356 - 44465804
Alignment:
Q  10 tgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttcatacaaatcttctttttga 108  Q
    |||||| |||||||||||| ||||||||| |||||||| |||||||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||    
T  44466356 tgatcaatgttttcggcttcggagaaaaagaagaaaaaaccaacacaattcaaactctcctcttatgtttttctcaccttcgtacaaatcttctttttga 44466257  T
Q  109 aaagaataagagcnnnnnnnnntcttaaattgtatcactctcatgctattattatcctaaacatttgacatttgctaagctcgtttgaaatatggacata 208  Q
    ||||||||| |||         ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44466256 aaagaataacagcaaaaaaaa-tcttaaattgtatcactgtcatgctattattatcctaaacatttgacatttgctaagctcgtttgaaatatggacata 44466158  T
Q  209 ggacaagtttttgaaatatattactccttagtaggcaggacaaaggatttggtagatcagtcacccattaattaaatcaccacccactccattaatcaaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44466157 ggacaagtttttgaaatatattactccttagtaggcaggacaaaggatttggtagatcagtcacccattaattaaatcaccacccactccattaatcaaa 44466058  T
Q  309 ataccaaattaatctagaaatcttagtgtgaaaacaaatcgataatttctccaatttcctagaagtgccatatattccatattccatactagtagtatag 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44466057 ataccaaattaatctagaaatcttagtgtgaaaacaaatcgataatttcgccaatttcctagaagtgccatatattccatattccatactagtagtatag 44465958  T
Q  409 tctttatgttcatcgacaaggttgactatacatgcactctctaattctatacttcaaaattacaaatatggtcaactttttgcagcagttaactgtaata 508  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44465957 tctttatgttcattgataaggttgactatacatgcactctctaattctatacttcaaaattacaaatatggtcaactttttgcagcagttaactgtaata 44465858  T
Q  509 cgtaaaatttgatatgtctctatccctagtcaaaataattgcacccctctcgac 562  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44465857 cgtaaaatttgatatgtctctatccctagtcaaaataattgcacccctctcgac 44465804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16557483 - 16557573
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  16557483 atctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 16557573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16608179 - 16608089
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  16608179 atctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 16608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4493829 - 4493737
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||    
T  4493829 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcata 4493737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16546210 - 16546277
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  16546210 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccc 16546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16619452 - 16619385
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  16619452 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccc 16619385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 33604186 - 33604099
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  33604186 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 33604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 10884046 - 10884133
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  10884046 tgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 10884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15467200 - 15467133
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||    
T  15467200 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaattcaaaccccc 15467133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35954784 - 35954851
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||    
T  35954784 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaacccccc 35954851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12175207 - 12175297
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||| |||||||||||||| ||||| ||| | ||||||| ||||||||    
T  12175207 atctgcttctgatcagtgttttcaactttggagaaaaacaagaaaaaaccaacacaattcaaccccccgcttgtgtttttcttaccttcat 12175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13027824 - 13027914
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac-cccctcttatatttttctcaccttca 90  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||| | ||| |||| | |||||||||||||||    
T  13027824 atctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaattcaacctcccttcttgtgtttttctcaccttca 13027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21691709 - 21691617
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc---tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||| |||||   |||| | |||||||||||||||    
T  21691709 atctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaattcaaccccccctttcttgtgtttttctcaccttca 21691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28623226 - 28623287
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  28623226 atctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 28623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2499313 - 2499221
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||||||    
T  2499313 atctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtgtttttctcaccttcata 2499221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11792155 - 11792063
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||||||    
T  11792155 atctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagataacacaattcaaccccccttcttgtgtttttctcaccttcata 11792063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14186971 - 14186880
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||||| |||||  |||| | |||||||||||||||    
T  14186971 atctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgtgtttttctcaccttca 14186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22580127 - 22580218
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    |||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||   ||||| ||| | |||||||||||||||    
T  22580127 atctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaattcaaccccccccccttgtgtttttctcaccttca 22580218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30025219 - 30025128
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||| ||||||| |||||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  30025219 atctgcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccccccttcttgtgtttttctcaccttca 30025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13473360 - 13473450
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||  | ||||||||||| |||| |||| ||||||||||| |||||||    
T  13473360 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa-actacacaattcaagccccttcttgtatttttctcatcttcata 13473450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19328883 - 19328949
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    |||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||    
T  19328883 atctgcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaattcaaccccc 19328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13138798 - 13138889
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc--cctcttatatttttctcaccttca 90  Q
    ||||||||||||||| ||||||| || || |||||||| ||||||||||||||||||||||| |||  | |||| | |||||||||||||||    
T  13138798 atctgcttctgatcaatgttttcagcataagagaaaaagaagaaaaagccaacacaattcaaccccctcttcttgtgtttttctcaccttca 13138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21284247 - 21284339
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||||||| |||||||| ||||   ||||||||  |||||||||||| ||||| |||| | |||||||||||||||||    
T  21284247 atctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttcata 21284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 41843296 - 41843384
Alignment:
Q  2 tctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa-accccctcttatatttttctcaccttc 89  Q
    |||||||||||||||||||||| ||||| |||||||  |||||||||  ||||||||||||  |||  |||||||||||||||||||||    
T  41843296 tctgcttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaattcaactccctttcttatatttttctcaccttc 41843384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13879428 - 13879361
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| || || |||||||| |||||||||| |||||||||||| |||||    
T  13879428 atctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaacccccc 13879361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 13259322 - 13259408
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||||||| || |||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||||||    
T  13259322 ttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcata 13259408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 16315413 - 16315506
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc--ccctcttatatttttctcaccttcatacaa 95  Q
    |||||||||||||||||||| |||||||||||||  |||||||| | |||||||||||| ||  || |||| | ||||||||||| ||||||||    
T  16315413 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaattcaacccctccttcttgtgtttttctcaccgtcatacaa 16315506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8182241 - 8182153
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||| |  ||||| | |||||||||||| ||||||||| ||||||||||||| |||| |||| | |||||||||||||||    
T  8182241 atctgcttctgatctgcattttcag-ttaggagaaaaacaagaaaaaggcaacacaattcaacccccttcttgtgtttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 15705370 - 15705434
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  15705370 tgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccccct 15705434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48237708 - 48237769
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||| |||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||    
T  48237708 atctacttctgatcagtgttttcagcttaagagaaaaagaagaaaaagtcaacacaattcaa 48237769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 12367633 - 12367725
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcatacaa 95  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||  |||||||||||| ||||| |||| | ||||||||| ||||| ||||    
T  12367633 tgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaagataacacaattcaaccccccgtcttgtgtttttctcaacttcaaacaa 12367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 13645733 - 13645669
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  13645733 tgcttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 13645669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 13731552 - 13731616
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  13731552 tgcttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 13731616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 13261551 - 13261636
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacctt 88  Q
    |||||||||||| ||| ||| |||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||    
T  13261551 tgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15087838 - 15087742
Alignment:
Q  1 atctgcttctgatca-gtgttttcggcttaggagaaaaat-aagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcatac 93  Q
    ||||||||||||||| |||||||| ||||| ||||||||  ||||||||| ||||||| ||||| |||||  |||| | ||||||||||||||||||    
T  15087838 atctgcttctgatcaagtgttttcagcttatgagaaaaaagaagaaaaagtcaacacagttcaacccccccttcttgtgtttttctcaccttcatac 15087742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 33421035 - 33420979
Alignment:
Q  5 gcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||    
T  33421035 gcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaa 33420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 3779534 - 3779586
Alignment:
Q  40 aagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    |||||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  3779534 aagaaaaagctaacacaattcaacccccttcttatgtttttctcaccttcata 3779586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23280848 - 23280908
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattc 60  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||| | ||||||||||    
T  23280848 atctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaattc 23280908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 11318675 - 11318589
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc--ccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||| |||||| |||||| ||| ||||||| | |||||||||| ||  || |||| | |||||||||||||||    
T  11318675 cttctgatcagtgttttcagcttagaagaaaactaaaaaaaagctagcacaattcaacccctccttcttgtgtttttctcaccttca 11318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14424592 - 14424525
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||  | |||||||||||  |||||||||  |||||||||||| |||||    
T  14424592 atctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaacccccc 14424525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15574481 - 15574547
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| || |||||   |||||||||||| ||||||||||||||||||||||| |||||    
T  15574481 atctgcttctgatctgtattttcaa-ttaggagaaaaagaagaaaaagccaacacaattcaacccccc 15574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 2914532 - 2914589
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||||||||||||| ||||||||| |||  |||||||||| ||||||||||||    
T  2914532 tgcttctgatcagtgttttcagcttaggag-aaacgaagaaaaagctaacacaattcaa 2914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13034726 - 13034772
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaa 47  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||    
T  13034726 atctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13302143 - 13302085
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||| ||||||||| |||||||||||||  |||||||| | ||||||||||||    
T  13302143 tgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaa 13302085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 5001738 - 5001793
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaatt 59  Q
    ||||||||||||||| |||| |||||||||||||  |||||||||| |||| ||||    
T  5001738 tgcttctgatcagtgctttcagcttaggagaaaacgaagaaaaagctaacataatt 5001793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9710707 - 9710797
Alignment:
Q  1 atctgcttctgatcagtg-ttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac-cccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||| ||||| |||||||||||||| ||  |||||| |||||||||||| | ||| ||||   |||||||||||||||    
T  9710707 atctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaaccgcccttcttgcgtttttctcaccttca 9710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 1292312 - 1292247
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    |||||||||||| |||||||||| ||||||||||||   |||| |||| | |||||||||||||||    
T  1292312 ttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttca 1292247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 9069042 - 9069000
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaa 46  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  9069042 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaa 9069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 9761932 - 9761886
Alignment:
Q  44 aaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||| ||||||||||||||||| |||| | |||||||||||||||    
T  9761932 aaaagctaacacaattcaaaccccttcttgtgtttttctcaccttca 9761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 16911752 - 16911798
Alignment:
Q  3 ctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagc 49  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||    
T  16911752 ctgctcctgatcagtgttatcagcttaggagaaaaagaagaaaaagc 16911798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 48063709 - 48063775
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcatac 93  Q
    |||||||||||| |||||||| | | || ||||||| |||| |||| | ||||||||||||||||||    
T  48063709 ttaggagaaaaagaagaaaaaactagcataattcaacccccttcttgtgtttttctcaccttcatac 48063775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 16317472 - 16317517
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagc 49  Q
    |||||||||||||||||||| ||||| |||||||  ||||||||||    
T  16317472 tgcttctgatcagtgttttcagcttatgagaaaacgaagaaaaagc 16317517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 22727272 - 22727224
Alignment:
Q  43 aaaaagccaacacaattcaaaccccctcttatatttttctcaccttcat 91  Q
    |||||| ||| ||||||||| |||| |||||| ||||||||||||||||    
T  22727272 aaaaagtcaatacaattcaacccccttcttatgtttttctcaccttcat 22727224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44397492 - 44397403
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  44397492 atctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccccttcttatgtttttctcaccttca 44397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22676386 - 22676475
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||| |||| | |||||||||||||||    
T  22676386 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaccccccttcttgtgtttttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29120651 - 29120560
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||  |||| | |||||||||||||||    
T  29120651 atctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaattcaacccccccttcttgtgtttttctcaccttca 29120560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3792616 - 3792527
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||| | |||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||   |||||||||||||||    
T  3792616 atctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccgtcttgcgtttttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 12600035 - 12599948
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||||| |||||||||| ||||    
T  12600035 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccccttcttatgtttttctcacattca 12599948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14905151 - 14905218
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  14905151 atctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaatccccc 14905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14605732 - 14605823
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  14605732 atctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttca 14605823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24628723 - 24628814
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||   | || |||| |||||||||||||||||    
T  24628723 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaactcctccttcttgtatttttctcaccttca 24628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 54679144 - 54679058
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacc 86  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||  |||||||||||| ||||| |||| | |||||||||||    
T  54679144 atctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcacc 54679058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 56033811 - 56033722
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcacctt 88  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||| || ||  |||| | |||||||||||||    
T  56033811 atctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccctccattcttgtgtttttctcacctt 56033722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 10072170 - 10072107
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||| ||||    
T  10072170 tgcttctgatcagtgttttcatcttaggagaaaaagaagaaaaagctaacacaattcaaccccc 10072107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23749809 - 23749743
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    |||| |||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||    
T  23749809 atctacttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccc 23749743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37436356 - 37436445
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||||||  | ||||||||||| |||||||| ||||||||||| || ||||| |||| | |||||||||||||||    
T  37436356 atctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaa-ccaacacaatttaaccccccttcttgtgtttttctcaccttca 37436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 16631719 - 16631631
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc--cctcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||| |||||||||||||  |||||||| |||||||||||||| |||  | |||| | |||||||||||||||    
T  16631719 tgcttttgatcagtgttttcagcttaggagaaaaggaagaaaaaaccaacacaattcaaccccctcttcttgtgtttttctcaccttca 16631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55379595 - 55379527
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||||||||||| |||||||||||||  ||| |||| |  ||||||||||||||||||    
T  55379595 atctgcttctgatcagtgttttcagcttaggagaaaatgaaggaaaaactcacacaattcaaaccccct 55379527  T

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Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19883976 - 19883909
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||| | |||||||||||| |||||    
T  19883976 atctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaattcaacccccc 19883909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17246893 - 17246847
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaa 47  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  17246893 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 29681346 - 29681432
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||| ||||| |||||| || |||||| | ||||||  |||||||    
T  29681346 tgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacactattcaacccacctcttgtgtttttcagaccttca 29681432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 10071784 - 10071692
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa-----accccctcttatatttttctcaccttcat 91  Q
    ||||||| |||||||||||| |||||||| ||||| |||||||||  ||||||||||||      |||| |||||| ||||||||||||||||    
T  10071784 tgcttcttatcagtgttttcagcttaggaaaaaaagaagaaaaagataacacaattcaactccctccccttcttatgtttttctcaccttcat 10071692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6516767 - 6516701
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| || ||||| | |||||||||||| || |||||||||||||||||||| |||||    
T  6516767 atctgcttctgatctgtattttcag-ttaggagaaaaagaataaaaagccaacacaattcaacccccc 6516701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 19611201 - 19611288
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||| |||||| | | |||||||||||  |||||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  19611201 tgcttctgatctgtgtttacagtttaggagaaaacgaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaccttca 19611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 40859963 - 40859900
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  40859963 taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 40859900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 3106267 - 3106331
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    |||||||||||| |||||||||| |||||||||| |||||| |||| | ||||||| |||||||||    
T  3106267 ttaggagaaaaagaagaaaaagctaacacaattc-aaccccttcttgtgtttttcttaccttcata 3106331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 15134999 - 15134915
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacct 87  Q
    ||||||||||||||||||||  |||| |||||||  |||||| | | |||||||||||| ||||| |||| | ||||||||||||    
T  15134999 tgcttctgatcagtgttttcaacttaagagaaaacgaagaaataactaacacaattcaaccccccttcttgtgtttttctcacct 15134915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 19621819 - 19621883
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||| ||||| ||||||||  ||||||||||||  |||||||||| |||||||||||| |||||    
T  19621819 tgcttttgatccgtgttttcatcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 19621883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13576974 - 13577064
Alignment:
Q  1 atctgcttctgatcagtg-ttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac-cccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||| ||||| |||||||||||||| ||  |||||| |||||||||||| | ||| ||||   |||||||||||||||    
T  13576974 atctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaaccgcccttcttgcgtttttctcaccttca 13577064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 13890087 - 13890028
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccct-cttatatttttctcaccttcata 92  Q
    ||||| |||||||| | |||||||||||| |||||| ||| |||||||||||||||||||    
T  13890087 aaaaagaagaaaaatctaacacaattcaaccccccttcttttatttttctcaccttcata 13890028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 17399531 - 17399597
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcat 91  Q
    |||||||||||| |||||||| | |||||||||||| |||||  |||| | ||||||||||||||||    
T  17399531 ttaggagaaaaagaagaaaaacctaacacaattcaacccccccttcttgtgtttttctcaccttcat 17399597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 23120802 - 23120732
Alignment:
Q  19 ttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||  |||||||||| |||||||||||| || ||| || | |||||||||||||||    
T  23120802 ttttcagcttaggagaaaatgaagaaaaagctaacacaattcaaccctcct-ttgtgtttttctcaccttca 23120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 41115665 - 41115728
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||  |||||||||  |||||||||||||||||| |||| | |||||||||||||||    
T  41115665 taggagaaaacgaagaaaaagttaacacaattcaaacccccttcttgtgtttttctcaccttca 41115728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 37986442 - 37986500
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||| |||||||||||||| | |||||||||||  |||||||| | ||||||||||||    
T  37986442 tgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaactaacacaattcaa 37986500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 21810746 - 21810795
Alignment:
Q  42 gaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||| ||||||||||||| ||||| |||||| |||||||||||||||    
T  21810746 gaaaaagtcaacacaattcaaccccccttcttatgtttttctcaccttca 21810795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 9752407 - 9752466
Alignment:
Q  35 aaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcata 92  Q
    |||| |||||||||| |||||||||||| |||||  |||| | |||||||||||||||||    
T  9752407 aaaagaagaaaaagctaacacaattcaaccccccattcttgtgtttttctcaccttcata 9752466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 15560527 - 15560463
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||  |||||||||| |||||||||||| ||||| |||| | ||||| |||||||||    
T  15560527 ttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtgtttttttcaccttca 15560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14954697 - 14954607
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  14954697 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 14954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13823357 - 13823289
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  13823357 atctgcttctgatcagtgttttcggcttaggagaaaaagaagaaaaatccaacacaattcaacccccct 13823289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1241945 - 1242035
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||| | |||| | |||||||||||||||    
T  1241945 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccccacttcttgtgtttttctcaccttca 1242035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 15902475 - 15902393
Alignment:
Q  8 tctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||| |||| | |||||||||||||||    
T  15902475 tctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14968656 - 14968595
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  14968656 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 14968595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49554380 - 49554472
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||| || | | |||||||||||||||||    
T  49554380 atctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtgtgtttttctcaccttcata 49554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52283082 - 52282991
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||||| |||||  |||| | |||||||||||||||    
T  52283082 atctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaattcaacccccccttcttgtgtttttctcaccttca 52282991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38178515 - 38178606
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttat-atttttctcaccttca 90  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||||  |||||||||||||||    
T  38178515 atctgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccctccttcttatgttttttctcaccttca 38178606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11189280 - 11189191
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||  ||| |||| | |||||||||||||||    
T  11189280 atcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaaccaacacaattcaacacccttcttgtgtttttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31302636 - 31302568
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||||| ||||||    
T  31302636 atctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaacccccct 31302568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29952307 - 29952374
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  29952307 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 29952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30001461 - 30001528
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  30001461 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 30001528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 52919711 - 52919620
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    |||||||| |||||||||||||| |||||||||||||  |||||||| | |||||||||||  |||| |||| | |||||||||||||||||    
T  52919711 atctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcagcccccttcttgtgtttttctcaccttcata 52919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6090015 - 6089925
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac-cccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  | |||||||| |||||||||||| | ||| |||| | |||||||||||||||    
T  6090015 atctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaattcaacctcccttcttgtgtttttctcaccttca 6089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12727106 - 12727196
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||||| || || |||| | |||||||||||||||    
T  12727106 atctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca 12727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20628332 - 20628398
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||| ||||    
T  20628332 atctgcttctgatcactgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccccc 20628398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40799177 - 40799085
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac---cccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||| |   ||| |||| | |||||||||||||||    
T  40799177 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccacccttcttgtgtttttctcaccttca 40799085  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2560472 - 2560383
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttc 89  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||  |||||||||||| ||||| |||| | ||||||||||||||    
T  2560472 atctgcttcttatcagtgttttcggcttaggagaagacgaagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttc 2560383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 14393870 - 14393958
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||  ||||||||||||  |||||||||| ||||||||||||   |||| |||| |||||||||||||||||||    
T  14393870 cttctgatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacgcccccttcttgtatttttctcaccttcata 14393958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11222835 - 11222742
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa---taagaaaaagccaacacaattcaaaccccctcttat-atttttctcaccttca 90  Q
    ||||||||||||||||||||||| ||||||||||| ||    ||||||||||||||||||||||| |||| |||| |  |||||||||||||||    
T  11222835 atctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacccccttcttgtgttttttctcaccttca 11222742  T

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Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 19889812 - 19889899
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||| |||||||||||| |||||||||||||  |||||||||| |||| ||||||| ||||| |||| | |||||||||||||||    
T  19889812 tgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacaaaattcaaccccccttcttgtgtttttctcaccttca 19889899  T

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Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 41494284 - 41494198
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttcata 92  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||| | |||| | |||| ||||||||||||    
T  41494284 cttctgatcagtgttttcagcttaggag-aaaagaagaaaaagccaacacaattcaaccccgcttcttgtgttttgctcaccttcata 41494198  T

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Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21639152 - 21639237
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacc 86  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  21639152 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcacc 21639237  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 8874998 - 8875086
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc--ccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||| ||||  |||||||| |||||||||||||| ||  || |||| | |||||||||||||||    
T  8874998 tgcttctgatcagtgttttcagcttaggaaaaaacgaagaaaaaaccaacacaattcaacccctccttcttgtgtttttctcaccttca 8875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 17667654 - 17667566
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||| |||||||||||||  |||||||| | |||||||||||| |||||  |||| | |||||||||||||||    
T  17667654 tgcttatgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccgttcttttgtttttctcaccttca 17667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11222083 - 11222013
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa---taagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| ||||||||||| ||    ||||||||||||||||||||||| |||||    
T  11222083 atctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacccccc 11222013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 13939180 - 13939116
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  13939180 tgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaacccccc 13939116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25399125 - 25399193
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||||||| ||||| ||||||| ||||||    
T  25399125 atctgcttctgattagtgttttcgacttaggagaaacagaagaaaaagtcaacataattcaacccccct 25399193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29854697 - 29854607
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    |||||||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||   |||| |||| | |||||||||||||||    
T  29854697 atctgcttctgatc-gtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttca 29854607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 12963959 - 12964046
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    ||||||| |||||||||||| ||| |||||||||  |||||||||| |||||||||||| || || |||| | |||||||||||||||    
T  12963959 tgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 22465376 - 22465443
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcataca 94  Q
    |||||||||||  |||||||||| |||||||||||| ||||| ||| | |||||||||||||||||||    
T  22465376 ttaggagaaaaggaagaaaaagctaacacaattcaaccccccccttgtgtttttctcaccttcataca 22465443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 28581378 - 28581292
Alignment:
Q  6 cttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    |||||||||| |||||| | |||||||||||||| |||||||||| |||||||||||| ||||  |||| | |||||||||||||||    
T  28581378 cttctgatcaatgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccccattcttgtgtttttctcaccttca 28581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 49643637 - 49643695
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  49643637 tgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 49643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 17239802 - 17239883
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctca 84  Q
    ||||| |||||| ||||||| |||||||||||||  |||||||||| |||||||||||| ||||  |||||| |||||||||    
T  17239802 tgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccattcttatgtttttctca 17239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46350711 - 46350772
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||| |||||| |||||  ||||||||||||| ||||||||| |||||||||||||    
T  46350711 atctgcttctcatcagtattttcaacttaggagaaaaagaagaaaaagtcaacacaattcaa 46350772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 50299525 - 50299431
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataaga----aaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    ||||   |||||||||||| ||||| |||||| |||||||||||||||    
T  50299525 atctgcttctgatcagtgttttcaacttaggagaaaaagaagaaaagaaaaaaaaacacaattcaaccccccttcttatgtttttctcaccttca 50299431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 13781459 - 13781523
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||| |||||||||||| | |||||||||||||  |||||||||| |||||||||||| |||||    
T  13781459 tgcttttgatcagtgtttccagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 13781523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18122518 - 18122585
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||| ||||||||||||||| || |||||||||||  ||||||| | |||||||||||| |||||    
T  18122518 atctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaattcaacccccc 18122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 19885951 - 19886038
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||  |||||| ||||| ||||| | || | |||||||||||||||    
T  19885951 tgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagataacacatttcaacccccctttttgtgtttttctcaccttca 19886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33582506 - 33582415
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataa-gaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||| ||||| ||||||||||||  |||| |||||||| || ||||||||||||||||||||| ||||| |||| | ||||| |||||||||    
T  33582506 atctacttcttatcagtgttttcatcttatgagaaaaaaaaagaaaaagccaacacaattcaaccccccttcttgtgtttttatcaccttca 33582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2782773 - 2782704
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaa--aataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||| ||||||||||||||||| ||| ||||||||  || |||||||| |||||||||||||| |||||    
T  2782773 atctgattctgatcagtgttttcagctaaggagaaaagaagaagaaaaaaccaacacaattcaacccccc 2782704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 11073678 - 11073624
Alignment:
Q  36 aaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||| |||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  11073678 aaatcagaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 11073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 16659434 - 16659521
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataag--aaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||  ||||||| |||| ||||||| ||||||  | | |||||||||||||||    
T  16659434 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaagctaacaaaattcaagcccccttgtgt-tttttctcaccttca 16659521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47206950 - 47206913
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  47206950 atctgcttctgatcagtgttttcagcttaggagaaaaa 47206913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2783163 - 2783100
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaa--aataagaaaaagccaacacaattcaa 62  Q
    ||||| ||||||||||||||||| ||| ||||||||  || |||||||| ||||||||||||||    
T  2783163 atctgattctgatcagtgttttcagctaaggagaaaagaagaagaaaaaaccaacacaattcaa 2783100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 13698612 - 13698556
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||| |||||||||||| |||  |||||| |||||||||||||||    
T  13698612 aaaaagaagaaaaagctaacacaattcaaccccattcttatgtttttctcaccttca 13698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 47406318 - 47406366
Alignment:
Q  41 agaaaaagccaacacaattcaaaccccctcttatatttttctcaccttc 89  Q
    |||||||| ||||||||||||| |||| |||||| ||||||||||||||    
T  47406318 agaaaaagtcaacacaattcaacccccttcttatgtttttctcaccttc 47406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16031787 - 16031729
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||  |||| |||||||||||||| |||||||||  | ||||||||||    
T  16031787 tgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaatcacaattcaa 16031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 20645438 - 20645380
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||| ||||||||||||||  ||||| ||||||  |||||||||| ||||||||||||    
T  20645438 tgcttttgatcagtgttttcaacttagaagaaaacgaagaaaaagctaacacaattcaa 20645380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22804891 - 22804937
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaa 47  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||||    
T  22804891 atctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaa 22804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 40850239 - 40850174
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||||||| |||||||| | |||||||||||| |||||  |||| | |||||||||||||||    
T  40850239 ttaggagaaaaagaagaaaaaactaacacaattcaaccccccgttcttgtgtttttctcaccttca 40850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46797265 - 46797354
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||  || ||||| | |||||||||||| ||||||||  ||||||| ||||| ||||| |||| | |||||||||||||||    
T  46797265 atctgcttctgatttgtattttcag-ttaggagaaaaagaagaaaaaatcaacacagttcaaccccccttcttgtgtttttctcaccttca 46797354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53057595 - 53057685
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    |||| |||||||| || |||||| |||||  ||||||| ||||||||  ||||||||||||| ||||  |||| | |||||||||||||||    
T  53057595 atctacttctgattagagttttcagcttataagaaaaaaaagaaaaaatcaacacaattcaaccccctttcttgtgtttttctcaccttca 53057685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47406287 - 47406324
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa 38  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  47406287 atctccttctgatcagtgttttcagcttaggagaaaaa 47406324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 13410965 - 13411021
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||| |||||||||||| ||||||  | |||||||||||| ||||    
T  13410965 aaaaagaagaaaaagctaacacaattcaaccccccttctgtatttttctcacattca 13411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 16199943 - 16199983
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  16199943 taggagaaaacgaagaaaaagccaacacaattcaacccccc 16199983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 22140267 - 22140227
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  22140267 taggagaaaaagaagaaaaagcaaacacaattcaacccccc 22140227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21624377 - 21624286
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||  |||| | |||||||||||||||    
T  21624377 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttca 21624286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 17380845 - 17380756
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||  |||| | ||||||||||||||||    
T  17380845 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttcat 17380756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21234441 - 21234348
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||| |||||  |||| |||||||||||||||||||    
T  21234441 atctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagctaacacaattcaaccccccattcttgtatttttctcaccttcata 21234348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13435170 - 13435080
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  13435170 atctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtttttttctcaccttca 13435080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10631422 - 10631330
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttcat 91  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| || ||  |||| | ||||||||||||||||    
T  10631422 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccctccattcttgtgtttttctcaccttcat 10631330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22801428 - 22801339
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |  ||||||| ||||||||||||||||| |||||||||||| |||| |||| | |||||||||||||||    
T  22801428 atctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 15301500 - 15301413
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  15301500 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 15301413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32543548 - 32543458
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||||||| || || |||| | |||||||||||||||    
T  32543548 atctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca 32543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 13601449 - 13601361
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||| ||||| |||| | || |||||||||||||    
T  13601449 tgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacacgattcaaccccccttcttgtgttattctcaccttcat 13601361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14101308 - 14101398
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    ||||||||||||||||| ||||| |||||||||||||  |||||||||| |||||||||||| ||||  |||| | |||||||||||||||    
T  14101308 atctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccctttcttgtgtttttctcaccttca 14101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 15532497 - 15532586
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc--cctcttatatttttctcaccttcat 91  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||  | |||| | ||||||||||||||||    
T  15532497 tgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccccttcttcttgtgtttttctcaccttcat 15532586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18377712 - 18377621
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||| || |||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| |||||  |||| |||||||| ||||||||    
T  18377712 atctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagccaacacaattcaacccccccttcttgtatttttcgcaccttca 18377621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 19085414 - 19085326
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    ||||||| |||||||||||| ||||| |||||||  ||||||||||||||||||||||| ||||| |||| | |||||| |||||||||    
T  19085414 tgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgtttttcacaccttcat 19085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24717681 - 24717752
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaat--aagaaaaagccaacacaattcaaaccccctc 70  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||  |||||||||||| |||||||    
T  24717681 atctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaattcaacccccctc 24717752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19833853 - 19833943
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    ||||||||||||||||||||||| | |||||||||||| | |||||||  |||||||||||| ||||| |||| | ||||||||||||||||    
T  19833853 atctgcttctgatcagtgttttcag-ttaggagaaaaagatgaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcat 19833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16528600 - 16528511
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcacctt 88  Q
    |||||||||| ||||||||||||  ||||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||||||||    
T  16528600 atctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcacctt 16528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9717111 - 9717020
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    |||||||| ||||||||||||||  ||||||||||||| ||||||| || ||||||||||||   |||| |||| | |||||||||||||||    
T  9717111 atctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaacacaattcaacctccccttcttgtgtttttctcaccttca 9717020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16333014 - 16332947
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  16333014 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccccct 16332947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 19623269 - 19623205
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||  |||||||||||||  ||||||||||||||| ||||||| |||||    
T  19623269 tgcttctgatcagtgtttttagcttaggagaaaacgaagaaaaagccaacataattcaacccccc 19623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20113497 - 20113565
Alignment:
Q  1 atctgcttctgatca-gtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  20113497 atctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccccc 20113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29917323 - 29917255
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||| ||||||| || ||||||||||||||||| |||||||||||| ||| |||||| ||||||    
T  29917323 atctgcttccgatcagtattgtcggcttaggagaaaaagaagaaaaagccaccacgattcaacccccct 29917255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 25593353 - 25593268
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||| |||||||||||||  ||||||||   |||||||||| ||||||| ||| | ||||||||||||||||    
T  25593353 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa-ataacacaattc-aacccccccttgtgtttttctcaccttcat 25593268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21617538 - 21617473
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    |||||||||||||| |||||||| | |||||||||||| |||||| |||||||||||||||| ||||    
T  21617538 atctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaacagccaacacaattcaaccccc 21617473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 14732985 - 14733045
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||  |||||||||||||  |||||||||| |||||||||||| ||||    
T  14732985 ttctgatcagtgtttttagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 14733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19688018 - 19687928
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc--cctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||||||  | |||||| |||| |||||||| |||||||||||||| |||  | |||| | |||||||||||||||    
T  19688018 atctgcttctgatcagtgttttcaacataggag-aaaagaagaaaaaaccaacacaattcaaccccctcttcttgtgtttttctcaccttca 19687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20731570 - 20731630
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattca 61  Q
    ||||||||||||||||||||||| |||||| ||||||| || ||||||  |||||||||||    
T  20731570 atctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaaggtaacacaattca 20731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15986647 - 15986556
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    ||||| ||||||||||||||||  ||||||| |||||  |||||||||  || ||||||| | |||| |||| | |||||||||| ||||||    
T  15986647 atctgtttctgatcagtgtttttagcttaggtgaaaacgaagaaaaagttaatacaattcgacccccttcttgtgtttttctcacattcata 15986556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18434795 - 18434728
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||| ||||||| | |||| ||||||||  |||||||||  |||||||||||| |||||    
T  18434795 atctgcttctgattagtgtttccagctttggagaaaatgaagaaaaagtaaacacaattcaacccccc 18434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 12422525 - 12422468
Alignment:
Q  2 tctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattc 60  Q
    ||||||||| ||  |||||||| | |||||||||||| |||||||||||||||||||||    
T  12422525 tctgcttctaatatgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattc 12422468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 16876185 - 16876107
Alignment:
Q  9 ctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||| | ||| ||||||||||||||||| | |||| |||||||  |||| ||| | |||||||||||||||    
T  16876185 ctgatcagtgttttcag-ttaagagaaaaataagaaaaaacaaacataattcaa--ccccccttgtgtttttctcaccttca 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 29537901 - 29537817
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcacctt 88  Q
    |||||||| ||||||||| ||||||||| |||  |||||||| | ||||||||||||  | ||| |||| | |||||||||||||    
T  29537901 cttctgattagtgttttcagcttaggagtaaacgaagaaaaaactaacacaattcaaccatcccttcttgtgtttttctcacctt 29537817  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17304130 - 17304195
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||  ||| |  ||||||||||  |||||||||| |||||||||||| |||||    
T  17304130 atctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaacccccc 17304195  T

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Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 25163348 - 25163260
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||||| ||||||||||||||||    
T  25163348 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttatgtttttctcaccttcat 25163260  T

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Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17796697 - 17796630
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  17796697 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccc 17796630  T

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Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45539355 - 45539445
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  45539355 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23185617 - 23185703
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcacctt 88  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| || | |||||||||||||    
T  23185617 atctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaattcaacccccct-ttgtgtttttctcacctt 23185703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 30422304 - 30422391
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||| | |||| | |||||||||||||||    
T  30422304 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaattcaacccctcttcttgtgtttttctcaccttca 30422391  T

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Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22673056 - 22672968
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  22673056 atctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 22672968  T

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Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18122003 - 18122071
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||    
T  18122003 atctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaattcaacccccct 18122071  T

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Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 17007587 - 17007500
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  17007587 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca 17007500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 17541363 - 17541450
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  17541363 tgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaccttca 17541450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23264498 - 23264565
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||| |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||    
T  23264498 atctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaattcaacccccc 23264565  T

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Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19942515 - 19942426
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    |||||||| ||||| |||||||| |||||||||||||  ||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  19942515 atctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaacataattcaacccccattcttatatttttctcaccttca 19942426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16206511 - 16206458
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaaca 54  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  16206511 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaaca 16206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9319852 - 9319761
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||| ||||||| || |||||  ||||||||||||| |||||  |||| | |||||||||||||||    
T  9319852 atctgcttctgatcagtgttttcagcttagaagaaaaagaataaaaaatcaacacaattcaacccccccttcttgtgtttttctcaccttca 9319761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31445382 - 31445316
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||||||||| ||||    
T  31445382 atctgcttctgatcagtgttttcagcttaggaaaaaaaaaaaaaaaaaccaacacaattcaaccccc 31445316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 12758616 - 12758680
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| | |||||||||||  |||||||||| |||||||||||| |||||    
T  12758616 tgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaattcaacccccc 12758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 19153301 - 19153237
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||| |||||||||||| |||||    
T  19153301 tgcttctgatcagtgttttcagcttaggagaaaacgaagaataagctaacacaattcaacccccc 19153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36104624 - 36104557
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||||| ||||||    
T  36104624 atctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaacccccct 36104557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21932156 - 21932097
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaatt 59  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||| |||||||||    
T  21932156 atctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaatt 21932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 14990984 - 14991049
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||||||| ||||||||||||||||||||||| |||||  |||| | |||||||||||||||    
T  14990984 ttaggagaaaaagaagaaaaagccaacacaattcaaccccccgatcttgtgtttttctcaccttca 14991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40846274 - 40846365
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaata--agaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| |  ||||||||| |||||||||||| ||||| |||| |||||||||||||||||    
T  40846274 atctgcttctgatctgtattttcag-ttaggagaaaaaaagaagaaaaagctaacacaattcaaccccccttcttgtatttttctcaccttca 40846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6407040 - 6406949
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttcata 92  Q
    |||||||||||||| || ||||| | |||||||||||| |||||||| |||||||||||||| ||||  |||| | ||||||||||| |||||    
T  6407040 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaaaccaacacaattcaacccccattcttgtgtttttctcaccatcata 6406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 27739125 - 27739070
Alignment:
Q  35 aaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||| |||||||||| |||||||||||| |||| |||| |||||||||||||||||    
T  27739125 aaaagaagaaaaagctaacacaattcaacccccttcttgtatttttctcaccttca 27739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 20383224 - 20383282
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||| |||||||||  ||||||||||||  |||||||||||| ||||||||||    
T  20383224 tgcttctgattagtgttttcaacttaggagaaaacgaagaaaaagccatcacaattcaa 20383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 13431520 - 13431581
Alignment:
Q  32 agaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||    
T  13431520 agaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcata 13431581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15336958 - 15337018
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||| |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||    
T  15336958 atctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15426023 - 15426083
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||| |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||    
T  15426023 atctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15426083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15517327 - 15517387
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||| |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||    
T  15517327 atctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16188550 - 16188462
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||||| |||| |||||||| ||||| || ||||| | |||||||||| ||||||| ||  | |||||||||||||||    
T  16188550 atctgtttctgatcagtgctttcagcttaggaaaaaaagaataaaaaactaacacaattc-aaccccccctggtgtttttctcaccttca 16188462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 17287067 - 17287124
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  17287067 aaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 17287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22662351 - 22662291
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||||||| || |||| |  |||||||||||| |||||||||||||||||||||||    
T  22662351 atctgcttctgatctgtatttttgt-ttaggagaaaaagaagaaaaagccaacacaattcaa 22662291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43644161 - 43644072
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct-cttatatttttctcaccttcat 91  Q
    ||||||||||||||||||  ||| |  ||||| ||||  || ||||||| |||||||||||| |||||| ||||| ||||||||||||||||    
T  43644161 atctgcttctgatcagtgaattcag--taggaaaaaatgaaaaaaaagctaacacaattcaaccccccttcttatgtttttctcaccttcat 43644072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 1210604 - 1210661
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  1210604 aaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 1210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 16682127 - 16682172
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagc 49  Q
    |||||||||||| ||||||| |||||||||||||  ||||||||||    
T  16682127 tgcttctgatcattgttttcagcttaggagaaaacgaagaaaaagc 16682172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 17442721 - 17442786
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggag-aaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| ||  ||||| ||||| || |||||| ||||||||||||| |||||    
T  17442721 tgcttctgatcagtgttttcagcacaggagaaaaaaaaataaaaagacaacacaattcaacccccc 17442786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 18676924 - 18676847
Alignment:
Q  14 cagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||| | |||||||||||    |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  18676924 cagtgtttccagcttaggagaatttgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 18676847  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 22212179 - 22212231
Alignment:
Q  41 agaaaaagccaacacaattcaaaccccct-cttatatttttctcaccttcata 92  Q
    ||||||||  |||||||||||| |||||| ||||| |||||||||||||||||    
T  22212179 agaaaaagaaaacacaattcaaccccccttcttatgtttttctcaccttcata 22212231  T

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Target: scaffold0315 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7956 - 7866
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||| | |||||| |||||||||||||||    
T  7956 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccctcttcttatgtttttctcaccttca 7866  T

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Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45087812 - 45087902
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  45087812 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 45087902  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22188922 - 22189013
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||  |||| | |||||||||||||||    
T  22188922 atctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaatcccccgttcttgtgtttttctcaccttca 22189013  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 28702042 - 28702129
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  28702042 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 28702129  T

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Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39038455 - 39038546
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa-accccctcttatatttttctcaccttcat 91  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||  |||| |||| | ||||||||||||||||    
T  39038455 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaactccccttcttgtttttttctcaccttcat 39038546  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24851487 - 24851577
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| || || |||| | |||||||||||||||    
T  24851487 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccctccttcttgtgtttttctcaccttca 24851577  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 24778613 - 24778525
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||| |||||  |||| | |||||||||||||||    
T  24778613 tgcttctgatcagtgttttcagcttaggagtaaacgaagaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttca 24778525  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22455774 - 22455865
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  22455774 atctgcttctgatcagtgttttgagcttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcaccttca 22455865  T

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Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25188687 - 25188600
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttc 89  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||  ||||||||| |  |||||||||||||    
T  25188687 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaccccccctcttgt-gttttctcaccttc 25188600  T

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Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38780681 - 38780590
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttat-atttttctcaccttcat 91  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||| |  ||||||||||||||||    
T  38780681 atctgcttatgattagtgttttcggcttaggagaaaaagaagaaaaaaccaacacaattcaccccccttcttgtgttttttctcaccttcat 38780590  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13964798 - 13964859
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| | ||||||||||||    
T  13964798 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaacaaacacaattcaa 13964859  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20569567 - 20569652
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacctt 88  Q
    |||||||||||||||||||| |||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||    
T  20569567 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaccccccttcttgtgtttttctcacctt 20569652  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31801700 - 31801768
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||||||||||| |||||||| | ||| |||||||| |||||||||||||| ||||||    
T  31801700 atctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaattcaacccccct 31801768  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 6391948 - 6391861
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| ||||| || | ||| |||||||| |||||||||||||| ||||| |||| | |||||||||||||||    
T  6391948 tgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttca 6391861  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 40780591 - 40780504
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||| | |||||||||||| || || |||| | |||||||||||||||    
T  40780591 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtgtttttctcaccttca 40780504  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 10010568 - 10010649
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcacc 86  Q
    |||||||||||||||||||| |||||||||||||  || ||||| | |||||||||  |||||| ||||||||||||||||||    
T  10010568 tgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaactaacacaatt-taaccccttcttatatttttctcacc 10010649  T

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Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 24575314 - 24575256
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  24575314 tgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaattcaa 24575256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 17964127 - 17964208
Alignment:
Q  10 tgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||| |||||||||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  17964127 tgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaccccccttcttttgtttttctcaccttca 17964208  T

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Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28712521 - 28712582
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||  |||| |||||||    
T  28712521 atctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaagaaaacataattcaa 28712582  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21538002 - 21538093
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaac-cccctcttatatttttctcaccttcat 91  Q
    |||||||||| |||| ||||||| ||||| |||||||  |||||||||| |||||||||||| |  || |||| ||||||||||||||||||    
T  21538002 atctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagcaaacacaattcaatcttccttcttgtatttttctcaccttcat 21538093  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 27294770 - 27294685
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||  |||||||||||||  |||||||| | |||||||||||| |||||  |||| | |||||||||||||||    
T  27294770 ttctgatcagtgtttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccccccttcttgtgtttttctcaccttca 27294685  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 25828436 - 25828352
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcacct 87  Q
    |||||||||||||||||||   ||||||||||||  |||||||||| |||| ||||||| ||||| |||| | ||||||||||||    
T  25828436 tgcttctgatcagtgtttttaccttaggagaaaacgaagaaaaagctaacataattcaaccccccttcttgtgtttttctcacct 25828352  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 28790128 - 28790176
Alignment:
Q  42 gaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  28790128 gaaaaagtcaacacaattcaacccccttcttatatttttctcaccttca 28790176  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23234238 - 23234183
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacaca 56  Q
    ||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||    
T  23234238 atctgcttctgatcagtgttttcagcataggagaaaaagaaaaaaaaaccaacaca 23234183  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31328789 - 31328878
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||| | |||||||||| | | |||||||||| |||||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  31328789 atctgcttctaaacagtgttttcagat-aggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca 31328878  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31335510 - 31335599
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||| | |||||||||| | | |||||||||| |||||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  31335510 atctgcttctaaacagtgttttcagat-aggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca 31335599  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6574979 - 6575016
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  6574979 atctgcttctgatcagtgttttcagcttaggagaaaaa 6575016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 28551765 - 28551826
Alignment:
Q  31 gagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    |||||||| |||||||||| |||||||||||| ||||| |||| | ||||||||||||||||    
T  28551765 gagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat 28551826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 1587874 - 1587938
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||| ||||||||||||| ||||| ||| ||||| |||| | |||||||||||||||    
T  1587874 ttaggagaaaaagaagaaaaagccaagacaatgcaaccccccttcttgtgtttttctcaccttca 1587938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20152809 - 20152857
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagc 49  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||    
T  20152809 atctgcttctgattagtgttttcaacttaggagaaaaagaagaaaaagc 20152857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 38631031 - 38630967
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| |||||||||||||  || ||||||  |||||| ||||| |||||    
T  38631031 tgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagttaacacagttcaatccccc 38630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 22782473 - 22782536
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||| |||||||||||| ||||| |||| | ||||| |||||||||    
T  22782473 taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttatcaccttca 22782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 22786497 - 22786562
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaa---ccccctcttatatttttctcaccttca 90  Q
    ||||| ||||| |||||||||| |||||||||||||   ||||||||| | |||||||||||||||    
T  22786497 taggataaaaagaagaaaaagctaacacaattcaaacccccccctcttgtgtttttctcaccttca 22786562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 23185172 - 23185233
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||| |||||||||| ||||||| ||| | ||||||| |||||||    
T  23185172 taggagaaaaagaagaaaaagctaacacaattc-aacccccccttgtgtttttcttaccttca 23185233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 23596435 - 23596496
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||| |||||||||| ||||||| ||| | ||||||| |||||||    
T  23596435 taggagaaaaagaagaaaaagctaacacaattc-aacccccccttgtgtttttcttaccttca 23596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 16494604 - 16494539
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    ||||||||||| |||||||||| ||| |||||||| ||||| |||| | ||||||||| |||||||    
T  16494604 taggagaaaaagaagaaaaagctaacccaattcaaccccccttcttgtgtttttctcaacttcata 16494539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 19539698 - 19539645
Alignment:
Q  40 aagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||    
T  19539698 aagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcata 19539645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41122495 - 41122585
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||  ||| |  ||||||||||  |||||||||  |||||||||||| || || |||| | |||||||||||||||||    
T  41122495 atctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagtaaacacaattcaaccctccttcttgtgtttttctcaccttcata 41122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 7687290 - 7687346
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||  | |||||||||||| |||| |||| |||||||||||||||||    
T  7687290 aaaaagaagaaaatactaacacaattcaacccccttcttgtatttttctcaccttca 7687346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 42255674 - 42255626
Alignment:
Q  42 gaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||| ||||||| | |||| || |||||||||||||||||    
T  42255674 gaaaaagccaacataattcaatctcccttttgtatttttctcaccttca 42255626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 44839692 - 44839629
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttat-atttttctcaccttca 90  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||| |  |||||||||||||||    
T  44839692 ttaggagaaaaagaagaaaaatcaaacacaattc-aaccccctcttgtgttttttctcaccttca 44839629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2833941 - 2833875
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  2833941 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 2833875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1577134 - 1577044
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || ||| |||||||||||||||    
T  1577134 atctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtatgtttttctcaccttca 1577044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1899632 - 1899566
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  1899632 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaaccccc 1899566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22153111 - 22153021
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  22153111 atctgcttctgatcaaagttttcagctaaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 22153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29215085 - 29214995
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa-accccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||| | || ||||||||| ||||| |||||| |||||||||||||||    
T  29215085 atctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaactaatacaattcaacaccccttcttatgtttttctcaccttca 29214995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25449381 - 25449469
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| | |||||||||||| || ||| |||||||||||||||| |||| |||| | |||||||||||||||    
T  25449381 atctgcttctgatcagtgttttcag-ttaggagaaaaagaaaaaatagccaacacaattcaacccccttcttgtgtttttctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20959824 - 20959911
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||| | ||||||||||||  |||| ||| | |||||||||||||||    
T  20959824 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaa--ccccccttgtgtttttctcaccttca 20959911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 7309072 - 7308984
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||||||||||||| | |||||||||||  |||||||| |||||||||||||| ||||| |||| | |||||||||||||||||    
T  7309072 tgcttctgatcagtgttttcag-ttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttcata 7308984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14294076 - 14294164
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||| |||||||||||||||||| |||||||||||||  |||||||||| ||||||||| || |||| |||| | |||||||||||||||    
T  14294076 atctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaatt-aacccccttcttgtgtttttctcaccttca 14294164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 30892347 - 30892259
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    |||||||||||||||||||| |||||| |||||   |||||||||| |||||||||||| ||||| |||| | ||||||||||||||||    
T  30892347 tgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat 30892259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38281648 - 38281556
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttat-atttttctcaccttcata 92  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||| |||| |||| |  ||||| |||||||||||    
T  38281648 atctgtttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaatccaacccccttcttgtgttttttatcaccttcata 38281556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22600980 - 22601047
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||| ||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||| |||||    
T  22600980 atctgattctgatcaatgttttcaggttaggagaaaaagaagaaaaagccaacacaattcaacccccc 22601047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23037317 - 23037384
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| |||||||| |||||    
T  23037317 atctgcttctgatcagtgttttcagcttatgataaaaagaagaaaaagccaacccaattcaacccccc 23037384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32786732 - 32786822
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||| |  ||||||||||||| || ||||| | |||||||||||| ||||| |||| | |||||||||||||||    
T  32786732 atctgcttctgatcagtgtttacaacttaggagaaaaagaaaaaaaatctaacacaattcaaccccccttcttgtgtttttctcaccttca 32786822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 36133487 - 36133429
Alignment:
Q  10 tgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||    
T  36133487 tgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccccc 36133429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22428132 - 22428193
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||  ||||||||||||    
T  22428132 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaa 22428193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 22465611 - 22465696
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||| ||||||||| |||  || ||||||  |||||||||||| ||||| |||| |||||||||||||||||    
T  22465611 cttctgatcagtgttttcagcttaggagtaaacgaataaaaagtaaacacaattcaaccccccttcttgtatttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44824547 - 44824614
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||| |||||||| | |||||||||||| ||||||| ||||||||||||||| ||||||    
T  44824547 atctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaggccaacacaattcaacccccct 44824614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 12283666 - 12283588
Alignment:
Q  14 cagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    |||||||||| |||||||||||||  |||||||||| ||||||||||||   || |||| | |||||||||||||||||    
T  12283666 cagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacatccttcttgtgtttttctcaccttcata 12283588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 22202678 - 22202764
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||| | |||||||||||  |||||||||  |||||||||||| ||||  ||| | |||||||||||||||    
T  22202678 tgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaagataacacaattcaaccccctccttgtgtttttctcaccttca 22202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 16233946 - 16234004
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    ||||| |||||||||| |||||||||||| | || |||||| |||||||||||||||||    
T  16233946 aaaaagaagaaaaagctaacacaattcaacctccttcttatgtttttctcaccttcata 16234004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33257165 - 33257223
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||| |||||||| ||||||||||||   |||||||||| ||||||||||||    
T  33257165 tgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaattcaa 33257223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33277337 - 33277395
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||| |||||||| ||||||||||||   |||||||||| ||||||||||||    
T  33277337 tgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaattcaa 33277395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2266371 - 2266324
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaag 48  Q
    ||||| ||||||||||||||||| |||||||||||||  |||||||||    
T  2266371 atctgattctgatcagtgttttcagcttaggagaaaacgaagaaaaag 2266324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 28493117 - 28493201
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| ||||| ||||||||  |||||||||| |  |||||||| | ||||||||||||  |||| ||| |||||||||||||||||    
T  28493117 tgcttatgatctgtgttttcaccttaggagaagacgaagaaaaaactaacacaattcaa--ccccccttgtatttttctcaccttca 28493201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 48703530 - 48703447
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||| ||||||||| ||||| |||| ||  ||||||||   |||||||||||| |||| | |||| |||||||||||||||    
T  48703530 ttctgataagtgttttcagcttaagagataaggaagaaaaaattaacacaattcaaccccctttttatgtttttctcaccttca 48703447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21121871 - 21121912
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||| |||||||||| |||||||||||| |||||    
T  21121871 ttaggagaaaaagaagaaaaagctaacacaattcaacccccc 21121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21205676 - 21205717
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||| |||||||||| |||||||||||| |||||    
T  21205676 ttaggagaaaaagaagaaaaagctaacacaattcaacccccc 21205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21215491 - 21215532
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||| |||||||||| |||||||||||| |||||    
T  21215491 ttaggagaaaaagaagaaaaagctaacacaattcaacccccc 21215532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 21983857 - 21983793
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||  |||||||||||| |||||  |||| | |||||||||||||||    
T  21983857 taggagaaaaagaagaaaaagaaaacacaattcaaccccccgttcttgtgtttttctcaccttca 21983793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 10250253 - 10250192
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    |||||||||||| |||||||| |||||||||||||    ||| ||| | |||||||||||||||||    
T  10250253 ttaggagaaaaagaagaaaaaaccaacacaattca----cccccttgtgtttttctcaccttcata 10250192  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 19214868 - 19214828
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  19214868 taggagaaaaagaagaaaaagcaaacacaattcaacccccc 19214828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 30571485 - 30571430
Alignment:
Q  3 ctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaatt 59  Q
    |||||||||||| || ||||| | |||||||||||| ||||||| ||||||||||||    
T  30571485 ctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaatgccaacacaatt 30571430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 48571071 - 48571135
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    |||||||||||| ||||||||  ||||||||||||| ||||  |||| | |||||||||||||||    
T  48571071 ttaggagaaaaagaagaaaaaatcaacacaattcaacccccattcttgtgtttttctcaccttca 48571135  T

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Target: scaffold0210 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 908 - 817
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||  ||||||||||||||||||  |||| | |||||||||||||||    
T  908 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaaccccccttcttgtgtttttctcaccttca 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30742224 - 30742133
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcata 92  Q
    ||||||||||||||||||||||| ||||   ||||||| ||||||||| ||||||||||||| |||| |||| | |||||||||||||||||    
T  30742224 atctgcttctgatcagtgttttcagctttaaagaaaaagaagaaaaagtcaacacaattcaacccccttcttgtgtttttctcaccttcata 30742133  T

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Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 31487490 - 31487403
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||| ||||| |||| | |||||||||||||||    
T  31487490 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttca 31487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6498599 - 6498511
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||| |||||||||||| |||||||||||||  |||||||||| |||||||||| ||||||||||| | |||| ||||||||||    
T  6498599 atctgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattc-aaccccctcttgtgttttactcaccttca 6498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 22000882 - 22000971
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| ||||||| |||| ||||| |||| | |||||||||||||||||    
T  22000882 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaactcaaccccccttcttgtgtttttctcaccttcata 22000971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7746548 - 7746616
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||||    
T  7746548 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccccct 7746616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 33932549 - 33932485
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||||    
T  33932549 tgcttctgatcagtgttttcagcttagaagaaaaaaaagaaaaagccaacacaattcaacccccc 33932485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21100602 - 21100692
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||| | |||||||||||| ||||| |||| |  ||||||||||||||    
T  21100602 atctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccttcttgtgcttttctcaccttca 21100692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37395452 - 37395362
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  37395452 atctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttca 37395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 6513285 - 6513374
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc--ccctcttatatttttctcaccttcat 91  Q
    ||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||| ||  || |||| | ||||||||||||||||    
T  6513285 tgcttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaattcaacccctccttcttgtgtttttctcaccttcat 6513374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 28465224 - 28465290
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcatac 93  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||| | ||||||| ||||||||||    
T  28465224 ttaggagaaaaaaaagaaaaagccaacacaattcaacccccttcttgtgtttttcttaccttcatac 28465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13736958 - 13737019
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||    
T  13736958 atctgtttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaa 13737019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21076035 - 21076128
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttcatac 93  Q
    |||||||||||||||||||| || |||||||||||||  |||||||||| |||| ||||||| || || |||| | |||||||||| |||||||    
T  21076035 atctgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaacataattcaaccctccttcttgtgtttttctcacattcatac 21076128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9399465 - 9399556
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||| | |||||||||||| || ||  |||| | |||||||||||||||    
T  9399465 atctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccctcctttcttgtgtttttctcaccttca 9399556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 90288 - 90375
Alignment:
Q  4 tgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||| |||||||||||| | |  |||| | |||||||||||||||    
T  90288 tgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacctcattcttgtgtttttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33021944 - 33021845
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaa---------taagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| ||||||||||||||         | |||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  33021944 atctgcttctgatcagtgttttcagcttaggagaaaaaggagaaaaatgagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 33021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12353715 - 12353783
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||||| |||||| ||||||||||||   |||||||||  |||||||||||| ||||||    
T  12353715 atctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaagttaacacaattcaacccccct 12353783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15516252 - 15516185
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    |||||||||||||  |||| ||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  15516252 atctgcttctgatatgtgtcttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccccct 15516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 19546385 - 19546449
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||| ||| ||||||||| |||  |||||||| |||||||||||||| |||||    
T  19546385 tgcttctgatcagtgtcttcagcttaggaggaaacgaagaaaaaaccaacacaattcaacccccc 19546449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 23413833 - 23413889
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||| ||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  23413833 cttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 23413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 30116726 - 30116816
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||||||||| |||| || |||||  |||| | |||||||||||||||    
T  30116726 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacagaatttaacccccccttcttgtgtttttctcaccttca 30116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11993173 - 11993107
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||| ||||||||||||||  | |||||||||||| |||||||||| |||||||||||| |||||    
T  11993173 atctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaattcaacccccc 11993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21199865 - 21199953
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||  ||| |  ||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  21199865 atctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 21199953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13546379 - 13546440
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||| ||||||| |||||| ||||||  |||||||||  ||||||||||||    
T  13546379 atctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaattcaa 13546440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 26120704 - 26120765
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttcatacaa 95  Q
    ||||| |||||||||| |||||||||||| |||| |||| | ||||||||||||||| ||||    
T  26120704 aaaaagaagaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttcaaacaa 26120765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 3246339 - 3246403
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||| |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  3246339 ttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 3246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26764755 - 26764689
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||  ||||||| | |||||||||||| ||||||||| |||| |||||||| |||||    
T  26764755 atctgcttctgatctatgttttcag-ttaggagaaaaagaagaaaaagtcaacgcaattcaacccccc 26764689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31117160 - 31117093
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||| || |||||||||||||| |||||||||||||  |||||||||  ||||| |||||| |||||    
T  31117160 atctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacactattcaacccccc 31117093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 42242889 - 42242855
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaa 38  Q
    |||||||||||||||||||| ||||||||||||||    
T  42242889 tgcttctgatcagtgttttcagcttaggagaaaaa 42242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 9088226 - 9088170
Alignment:
Q  40 aagaaaaagccaacacaattcaaacc--ccctcttatatttttctcaccttcataca 94  Q
    ||||||||||||||||||||||| ||  || |||| | |||||||||||||||||||    
T  9088226 aagaaaaagccaacacaattcaacccttccttcttgtgtttttctcaccttcataca 9088170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28138883 - 28138823
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||| |||||||| || ||||| | |||||||||||| ||||||||| |||||||||||||    
T  28138883 atctgtttctgatctgtattttcag-ttaggagaaaaagaagaaaaagtcaacacaattcaa 28138823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 35932885 - 35932949
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    ||||||||||| |||||||||| ||||||||||||   |||| |||| | |||||||||||||||    
T  35932885 taggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttca 35932949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 24495383 - 24495431
Alignment:
Q  43 aaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| |||||||||||||||||||| |||||| |||||||||| ||||    
T  24495383 aaaaaaccaacacaattcaaacccccttcttatgtttttctcactttca 24495431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 31146482 - 31146526
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccctctt 72  Q
    ||||||||||| |||||||||| |||||||||||| |||| ||||    
T  31146482 taggagaaaaagaagaaaaagctaacacaattcaacccccttctt 31146526  T

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Target: scaffold0205 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 776 - 866
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  776 atctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaattcaaccccccttcttgtgtttttctcaccttca 866  T

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Target: scaffold0004 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 210691 - 210603
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  210691 atctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 210603  T

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Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 219520 - 219436
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttca 90  Q
    ||||||||||||||||| |||||||||||||  || |||||   |||||||||||| ||||  ||||||||||||||||||||||    
T  219520 ttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaagtaacacaattcaaccccctttcttatatttttctcaccttca 219436  T

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Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 378378 - 378436
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||| ||||||||| | |||||||||||  |||||||||| ||||||||||||    
T  378378 tgcttctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaattcaa 378436  T

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Target: scaffold0439 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7533 - 7600
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccct 69  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  7533 atctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccccct 7600  T

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Target: scaffold0005 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 211646 - 211555
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  211646 atctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttca 211555  T

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Target: scaffold0036 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 111424 - 111491
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||| |||||    
T  111424 atctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaattcaacccccc 111491  T

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Target: scaffold0026 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 7163 - 7076
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |||| | ||||| ||||| |||| | |||||||||||||||    
T  7163 tgcttctgatcagtgttttcagcttaggagaaaaataagaaaaagttaacagagttcaaccccccttcttgtgtttttctcaccttca 7076  T

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Target: scaffold0859 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2256 - 2166
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccc-cctcttatatttttctcaccttca 90  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||  |||||||||||| ||| | |||| | |||||||||||||||    
T  2256 atctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccacttcttgtgtttttctcaccttca 2166  T

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Target: scaffold0479 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9253 - 9187
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||    
T  9253 atctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccc 9187  T

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Target: scaffold0471 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2740 - 2651
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    |||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  2740 atctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 2651  T

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Target: scaffold0330 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 495 - 561
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc 67  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||    
T  495 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaactcaattcaaccccc 561  T

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Target: scaffold0359 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6548 - 6639
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||  |||||||||||| |||||  |||| | |||| ||||||||||    
T  6548 atctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaaacacaattcaacccccccttcttgtgttttcctcaccttca 6639  T

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Target: scaffold0290 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19478 - 19569
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||| ||||||||| || || |||||||  ||||||||||||||||||||||| |||||  |||| | |||||||||||||||    
T  19478 atctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttca 19569  T

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Target: scaffold0084 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 31873 - 31785
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcat 91  Q
    ||||||||||||||||||   |||||||||||||  |||||||||| |||||||||||| ||||| |||| | ||||||||||||||||    
T  31873 tgcttctgatcagtgtttcaagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat 31785  T

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Target: scaffold0084; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 48599 - 48512
Alignment:
Q  5 gcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||||||||| | |||||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||| ||||||    
T  48599 gcttctgatcagtgtttccagcttaggagaaaatgaagaaaaagctaacacaattcaacccccccttcttgtgtttttctctccttca 48512  T

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Target: scaffold0009 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 83648 - 83584
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaac 64  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||||    
T  83648 atctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaac 83584  T

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Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 83579 - 83494
Alignment:
Q  6 cttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||||||||||||||| | |||||||||||||| |||||||||| |||||||||||| | |  |||| | |||||||||||||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacctcattcttgtgtttttctcaccttca 83494  T

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Target: scaffold0567 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 9182 - 9098
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||  |||||||||||  |||| ||| | |||||||||||||||    
T  9182 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcttacacaattcaa--ccccccttgtgtttttctcaccttca 9098  T

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Target: scaffold0022 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 36713 - 36626
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| |||| ||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  36713 tgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 36626  T

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Target: scaffold0022; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 134773 - 134686
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| |||| ||||||||| |||||||||||||  |||||||||| |||||||||||| ||||| |||| | |||||||||||||||    
T  134773 tgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 134686  T

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Target: scaffold0530 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2841 - 2905
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||| |||||||||||| |||||    
T  2841 tgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccc 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 25712 - 25648
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||||| |||||||||||||  |||||||||  |||||||||||| |||||    
T  25712 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaacccccc 25648  T

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Target: scaffold0115 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 17615 - 17557
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaa--aataagaaaaagccaacacaattc 60  Q
    |||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||    
T  17615 tgcttctgatcagtgttttcagcttaggagaaaagaagaagaaaaagccaacacaattc 17557  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24600 - 24690
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctcaccttcat 91  Q
    ||||||||||||| ||||||||| | |||||||||||| |||||| ||| |||| ||||||| ||||  |||||| ||||||||||||||||    
T  24600 atctgcttctgattagtgttttcag-ttaggagaaaaagaagaaagagcaaacataattcaacccccattcttatgtttttctcaccttcat 24690  T

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Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23913 - 23824
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacc-ccctcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| |||||||| |||||||||||||| || || |||| | |||||||||||||||    
T  23913 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaaaccaacacaattcaaccctccttcttgtgtttttctcaccttca 23824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 20294 - 20376
Alignment:
Q  6 cttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcacctt 88  Q
    |||||||||||| ||||  |||||||||||||  |||||||| | |||||||||||| |||| |||| | |||||||||||||    
T  20294 cttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccccttcttttgtttttctcacctt 20376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 110416 - 110482
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| || ||||| | |||||||||||  |||||||| |||||||||||||| |||||    
T  110416 atctgcttctgatctgtattttcag-ttaggagaaaacgaagaaaaaaccaacacaattcaacccccc 110482  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 102842 - 102752
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa-accccc-tcttatatttttctcaccttc 89  Q
    |||||||| |||||||||||||| |||||||||||||  |||||||||  || ||||||||| |||||| |||| | ||||||||||||||    
T  102842 atctgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagttaatacaattcaacacccccttcttgtgtttttctcaccttc 102752  T

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Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 14398 - 14317
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaacccc-ctcttatatttttctca 84  Q
    ||||| |||||| ||||||| |||||||||||||  |||||||||| |||||||||||| ||||  |||||| |||||||||    
T  14398 tgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccccattcttatgtttttctca 14317  T

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Target: scaffold0251 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7117 - 7053
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaac 64  Q
    |||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||||||||    
T  7117 atctgcttctgatcagtgtttttcagcttccgagaaaaagaagaaaaagctaacacaattcaaac 7053  T

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Target: scaffold0607 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5419 - 5353
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    ||||||||||||||  | ||||| | |||||| ||||| |||||||||||||||||||||||||||||    
T  5419 atctgcttctgatctatattttcag-ttaggataaaaagaagaaaaagccaacacaattcaaaccccc 5353  T

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Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16273 - 16206
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||||||  |||| |||||||||||||  |||||| ||| |||||||||||| |||||    
T  16273 atctgcttctgatcagtaatttcagcttaggagaaaacgaagaaatagctaacacaattcaacccccc 16206  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 66229 - 66295
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| |  ||||| | |||||||||||| ||||||||||||||||||||||| |||||    
T  66229 atctgcttctgatctgcattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccccc 66295  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 145297 - 145363
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaacc---ccctcttatatttttctcaccttca 90  Q
    |||| ||||||| ||||||||||||||||||||||| ||   || |||| | |||||||||||||||    
T  145297 ttagaagaaaaagaagaaaaagccaacacaattcaaccccatccttcttgtgtttttctcaccttca 145363  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 753 - 815
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||  |||| |||||||    
T  753 atctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacataattcaa 815  T

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Target: scaffold0217; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18323 - 18255
Alignment:
Q  1 atctgcttctgatcagtgtttt-cggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||  ||||||||||||| | |||||||||||||| |||||||||  |||||||||||| |||||    
T  18323 atctgctcttgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccccc 18255  T

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Target: scaffold0217; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22980 - 23069
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||| ||||| || ||||| | |||||||||||| ||||||| ||||||||||||||| |||||  |||| | |||||||||||||||    
T  22980 atctgcttttgatctgtattttcag-ttaggagaaaaagaagaaaa-gccaacacaattcaacccccccttcttgtgtttttctcaccttca 23069  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 26499 - 26564
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    |||||||||||| |||||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  26499 ttaggagaaaaagaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcaccttca 26564  T

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Target: scaffold1359 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30 - 91
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa 62  Q
    ||||||||||||||||||||||  | |||||||||||  |||||||||  ||||||||||||    
T  30 atctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaa 91  T

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Target: scaffold0280 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3507 - 3573
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc 68  Q
    |||||||||||||| || ||||| | |||||||||||| |||||||||  |||||||||||| |||||    
T  3507 atctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagaaaacacaattcaacccccc 3573  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 10938 - 10989
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaat 58  Q
    ||||||||||| ||||| |||||||||||||  |||||||||| ||||||||    
T  10938 ttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaat 10989  T

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Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 15602 - 15653
Alignment:
Q  7 ttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaat 58  Q
    ||||||||||| ||||| |||||||||||||  |||||||||| ||||||||    
T  15602 ttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaat 15653  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 21762 - 21849
Alignment:
Q  4 tgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||| ||||||||||||||  ||||  ||||||  |||||||||  |||||||||||| ||||| |||| | |||||||||||||||    
T  21762 tgcttatgatcagtgttttcaacttaaaagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 21849  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13279 - 13191
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttca 90  Q
    ||||||||||||||||||  ||| |  ||||||||||  |||||||||| |||||||||||| ||||| | || | |||||||||||||||    
T  13279 atctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaacccccctttttgtgtttttctcaccttca 13191  T

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Target: scaffold0488 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 11460 - 11394
Alignment:
Q  27 ttaggagaaaaataagaaaaagccaacacaattcaaaccccc-tcttatatttttctcaccttcata 92  Q
    |||||||||||| |||||||| | |||||||||||| ||||| |||| | ||||||||| |||||||    
T  11460 ttaggagaaaaagaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaacttcata 11394  T

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Target: scaffold1747 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 581 - 517
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  581 taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca 517  T

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Target: scaffold1745 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 830 - 894
Alignment:
Q  28 taggagaaaaataagaaaaagccaacacaattcaaaccccc--tcttatatttttctcaccttca 90  Q
    ||||||||||  |||||||||| |||||||||||| |||||  |||| | |||||||||||||||    
T  830 taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca 894  T

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Target: scaffold0758 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 3568 - 3513
Alignment:
Q  34 aaaaataagaaaaagccaacacaattcaaaccccctcttatatttttctcaccttca 90  Q
    ||||| |||||||| |||||||||||| ||||||||||| | |||||||| ||||||    
T  3568 aaaaagaagaaaaaaccaacacaattc-aaccccctcttgtgtttttctcgccttca 3513  T

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Target: scaffold0247 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16538 - 16627
Alignment:
Q  1 atctgcttctgatcagtgttttcggcttaggagaaaaataagaaaaagccaacacaattcaa--accccctcttatatttttctcaccttca 90  Q
    |||||||||||||| || ||||| | |||||||||||| ||||||||| ||||| |||||||   ||||||||| | ||| |||||||||||    
T  16538 atctgcttctgatctgt-ttttcag-ttaggagaaaaagaagaaaaaggcaacaaaattcaacccccccctcttgtgtttatctcaccttca 16627  T

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