View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6900_low_18 (Length: 485)
Name: NF6900_low_18
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6900_low_18 |
 | |
|
| [»] chr4 (8 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
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|
Alignment Details
Target: chr4 (Bit Score: 452; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 18 - 485
Target Start/End: Original strand, 4122480 - 4122947
Alignment:
| Q |
18 |
acatcattcatctactagagttttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcatttt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122480 |
acatcattcatctactagagttttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcatttt |
4122579 |
T |
|
| Q |
118 |
catcaccaccaacaacattcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaat |
217 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122580 |
cagcaccaccaacaacattcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaat |
4122679 |
T |
|
| Q |
218 |
gaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122680 |
gaaactgtttccaaaaacaacaacaatctccactttgtcaccaggttccatatttgataccactctcttccattcctcattttctaaggaggataacgcc |
4122779 |
T |
|
| Q |
318 |
tctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaa |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122780 |
tctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaa |
4122879 |
T |
|
| Q |
418 |
tgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctttg |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4122880 |
tgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaacaacagaataacctttg |
4122947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 38 - 483
Target Start/End: Original strand, 4319152 - 4319603
Alignment:
| Q |
38 |
ttttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcattttcatcacc------accaaca |
131 |
Q |
| |
|
|||||||||||| ||| |||||| | ||||||| | |||||||||| |||||| |||| ||||||| ||||||||||||||||| | ||| | |
|
|
| T |
4319152 |
ttttcttcttttctgtttttgttcaaaatcatctgtaggctctacttggcgagagatcctcatggcagcacattcattttcatcaccgatatcaacaaga |
4319251 |
T |
|
| Q |
132 |
acattcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaa |
231 |
Q |
| |
|
|||||||||| ||||| ||| |||||||| | | |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4319252 |
acattcttatctggtgtatgacattgctccaatatttcgacgactggttcatcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaa |
4319351 |
T |
|
| Q |
232 |
aaacaacaacaatctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagag |
331 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||||||||| ||| ||||||| ||| ||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
4319352 |
aaacgacaacaatctccaccttgtcaccaggttccatatttgttacaactctctgccactcctcattttcaaaggaggataatgcttctctcttatagag |
4319451 |
T |
|
| Q |
332 |
ttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtc |
431 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||| | | ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
4319452 |
ttgaatggtggtctttgtgtgatttatcactaacacattttcaaggccatctgatgttatgtcgtatgggcttgaagaatagacaatgcacattattgtc |
4319551 |
T |
|
| Q |
432 |
ttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
4319552 |
ttcaagctacgtccttccacttgagggacttcaaaaattacagaagaacctt |
4319603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 35 - 484
Target Start/End: Complemental strand, 4337341 - 4336895
Alignment:
| Q |
35 |
gagttttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcattttcatcaccac---caac- |
130 |
Q |
| |
|
||||||||||||||| ||| ||||||| ||||||| |||||||||| ||||||| |||||||||||| |||||||||| |||||||| |||| |
|
|
| T |
4337341 |
gagttttcttcttttctgtttttgttttaaatcatctgcaggctctacttgaagagagatcctcttggcagcacattcatttttatcaccactctcaacg |
4337242 |
T |
|
| Q |
131 |
--aacattcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttc |
228 |
Q |
| |
|
|||||||| || ||||||||| |||||||| | |||||| |||| ||||||||||||||||| |||| |||||||||| ||||||| | |
|
|
| T |
4337241 |
agaacattctcatctggtgcatgacattgctcaaatttttcg---------tcatgatatatgagataaactgttgtcctcatcacaatataactgttcc |
4337151 |
T |
|
| Q |
229 |
caaaaacaacaacaatctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttata |
328 |
Q |
| |
|
||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||||||||||| | |
|
|
| T |
4337150 |
caaaaacaacaacaatctcgactttatcaccaggttccatatttgataccactctctgccactcctcattttcgaaggacgataatgcctctctcttaaa |
4337051 |
T |
|
| Q |
329 |
gagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcatt |
428 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4337050 |
gagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccatctgatgttatgtcatttgggcttgaagaatagacaatgcacatcatt |
4336951 |
T |
|
| Q |
429 |
gtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataaccttt |
484 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
4336950 |
gtcttcaagctacgtccttccacatgagggacttcaaaatttacagaataaccttt |
4336895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 485
Target Start/End: Complemental strand, 4363016 - 4362544
Alignment:
| Q |
18 |
acatcattcatct--actagagttttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcatt |
115 |
Q |
| |
|
||||||||||||| || || |||||||||||||||||||||| |||| ||||||| || ||||||||| |||| || |||||| || ||||||||| |
|
|
| T |
4363016 |
acatcattcatctccaccagtgttttcttcttttttgtctttgattagaatcatctgtggactctacttgaggagaaacaatcttggaagagcattcatt |
4362917 |
T |
|
| Q |
116 |
ttcatcaccaccaacaa---cattcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatc |
212 |
Q |
| |
|
||||||||||||||||| ||||| ||| | | | || || || || |||||| | | |||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
4362916 |
ttcatcaccaccaacaataacattcgtatcttgggaatcacagtggtccatttttccgtcaattggttcatcatatatgagataaactgctgtcttcgtc |
4362817 |
T |
|
| Q |
213 |
acaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggata |
312 |
Q |
| |
|
||||||| | |||| | | |||| ||| ||||||||| |||||||| ||||||||||||||| |||||||| ||| ||| ||||||| ||||| |||| |
|
|
| T |
4362816 |
acaatgacattgttcaccattacaataactatctccactttgtcaccaggttccatatttgatatcactctctgccagtccgcattttcgaaggacgata |
4362717 |
T |
|
| Q |
313 |
acgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaata |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||| ||||||||| ||||| |
|
|
| T |
4362716 |
acgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttctaaggccatctgatgttatgtcatatgggcttgaagaata |
4362617 |
T |
|
| Q |
413 |
gacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctttg |
485 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4362616 |
gacaatgcacattattgtcttcaagctacatccttccacttgagggacttcaaaaattacagaataacctttg |
4362544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 39 - 485
Target Start/End: Complemental strand, 4346804 - 4346348
Alignment:
| Q |
39 |
tttcttcttttttgtctttgtttagtatcatctatgtgctctacttgcagagagaccctcttggcagcgcattcattttcatcaccaccaacaa---cat |
135 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| || ||||||||| |||| | |||||||| || |||||||||||||||||||||||||| ||| |
|
|
| T |
4346804 |
tttcttcttttttgtctttgattagaatcatctgtggactctacttgaggagaaatcctcttggaagagcattcattttcatcaccaccaacaataacat |
4346705 |
T |
|
| Q |
136 |
tcttatttggtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaac |
235 |
Q |
| |
|
|| ||| |||||||| || || ||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||| | |||| | | ||| |
|
|
| T |
4346704 |
tcatatctggtgcatcacaatggtctattttttcgtcaattggttcatcatatatgagataaactgctgtcttcgtcacaatgacattgttcaccataac |
4346605 |
T |
|
| Q |
236 |
aacaacaatctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttga |
335 |
Q |
| |
|
|||||| ||||||||| |||||||| |||||||||| |||| || ||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
4346604 |
aacaactatctccactttgtcaccaggttccatattcgatatcattctctgccagtcctccctttcaaaggacgataacgcctctctcttatagagttga |
4346505 |
T |
|
| Q |
336 |
atggtggtctttgtgtgatttatcaccaacacattttgaaggcca-------actgatgctatgccatttgggcttgatgaatagacaatgcacatcatt |
428 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
4346504 |
atggtggtctttgtgtgatttatcaccaacacatttttaaggccatctgatgtctgatgttatgtcatctgggcttgaagaatagacaatgcacattatt |
4346405 |
T |
|
| Q |
429 |
gtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctttg |
485 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
4346404 |
gtcttcaagctatgtccttccacttgagggacttcaaagattacagaataacctttg |
4346348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 76 - 372
Target Start/End: Original strand, 4132521 - 4132805
Alignment:
| Q |
76 |
gctctacttgcagagagaccctcttggcagcgcattcattttcatcaccaccaacaacattcttatttggtgcatggcattgctctattttttcaccgat |
175 |
Q |
| |
|
|||||||||| |||| || |||||||||||| ||||||||||||||||||| | || |||| ||||||| |||||| | | |||||||| || |
|
|
| T |
4132521 |
gctctacttgaagagtgaacctcttggcagcacattcattttcatcaccactacca----tctt-----gtgcatgacattgccccaaattttcaccaat |
4132611 |
T |
|
| Q |
176 |
tggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgat |
275 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||| |||||||| |||||||||||||| |
|
|
| T |
4132612 |
tggttcatcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaaca---acaatctcgactttgtcaccaggttccatatttgat |
4132708 |
T |
|
| Q |
276 |
accactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttt |
372 |
Q |
| |
|
|| ||||||| ||| ||||||||||| ||||||| || ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4132709 |
actactctctgccactcctcattttcaaaggaggcgaatgcctctctcttatagagctgaatggtagtcttcgtgtgatttatcaccaacacatttt |
4132805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 385
Target Start/End: Complemental strand, 25569165 - 25568932
Alignment:
| Q |
155 |
ttgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttc---caaaaacaacaacaatctccact |
251 |
Q |
| |
|
|||||| ||| |||| || ||| ||||||| |||| ||||||||||| ||| ||| |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
25569165 |
ttgctccattatttcgccaattagttcatcgtatacgagataaactgttgtattcttcactttgaaactgcgccactcaaaaacaaaaacaacctccact |
25569066 |
T |
|
| Q |
252 |
ctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgt |
351 |
Q |
| |
|
||| ||| |||| ||| ||||||| ||| | | || ||||| ||||| ||||| ||| ||||||||||| |||| |||||||||| ||| |||| |
|
|
| T |
25569065 |
ttgtttccaggttctatacttgatactactatatgcccctcctcgttttcaaaggaaactaatgcctctctcttgtagacctgaatggtggacttggtgt |
25568966 |
T |
|
| Q |
352 |
gatttatcaccaacacattttgaaggccaactga |
385 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||| |
|
|
| T |
25568965 |
aatttttcaccatgacattttgaaggccatctga |
25568932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 6676876 - 6676839
Alignment:
| Q |
318 |
tctctcttatagagttgaatggtggtctttgtgtgatt |
355 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
6676876 |
tctcttttatagagttgaatggttgtctttgtgtgatt |
6676839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 176 - 483
Target Start/End: Original strand, 5100812 - 5101119
Alignment:
| Q |
176 |
tggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgat |
275 |
Q |
| |
|
||||||||| |||| ||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||| ||| ||| |||| ||| ||||| |
|
|
| T |
5100812 |
tggttcatcgtatacgagataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgat |
5100911 |
T |
|
| Q |
276 |
accactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaa |
375 |
Q |
| |
|
|| || ||| ||||||| ||| |||||| ||| ||||| ||||||||||| |||||||||| |||||||| |||| |||| |||||||||| || |
|
|
| T |
5100912 |
actaccctcagagcctcctcatcttcaaaggagactaatgcctcgctcttatagagctgaatggtggcctttgtgtaatttttcactaacacatttttaa |
5101011 |
T |
|
| Q |
376 |
ggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacaga |
475 |
Q |
| |
|
||||| ||||| |||| || |||| |||| | |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||| |
|
|
| T |
5101012 |
ggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttctaaagttacaga |
5101111 |
T |
|
| Q |
476 |
ataacctt |
483 |
Q |
| |
|
| |||||| |
|
|
| T |
5101112 |
agaacctt |
5101119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 176 - 483
Target Start/End: Original strand, 5135913 - 5136220
Alignment:
| Q |
176 |
tggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgat |
275 |
Q |
| |
|
||||||||| |||| ||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||| ||| ||| |||| ||| ||||| |
|
|
| T |
5135913 |
tggttcatcgtatacgagataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgat |
5136012 |
T |
|
| Q |
276 |
accactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaa |
375 |
Q |
| |
|
|| || ||| ||||||| ||| ||||||| ||| || || ||||| ||||| |||||||||| |||||||| |||| | ||||||||||||| || |
|
|
| T |
5136013 |
actaccctcagagcctcctcatcttcaaaggaggctaatgcttcgctcttgtagagctgaatggtggcctttgtgtaattttttaccaacacatttttaa |
5136112 |
T |
|
| Q |
376 |
ggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacaga |
475 |
Q |
| |
|
||||| ||||| |||| || |||| |||| | |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||| |
|
|
| T |
5136113 |
ggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttctaaagttacaga |
5136212 |
T |
|
| Q |
476 |
ataacctt |
483 |
Q |
| |
|
| |||||| |
|
|
| T |
5136213 |
agaacctt |
5136220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 165 - 483
Target Start/End: Original strand, 5065432 - 5065753
Alignment:
| Q |
165 |
ttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgtt |
264 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||| |||| || |||||| ||||| ||| ||||||||||||||| |||||| | | ||| ||| |
|
|
| T |
5065432 |
ttttcagcaattggttcatcatatatgagataaactgttgtcctcttcacaacgaaaccgttctcaaaaacaacaacaaaatccactttatttccaggtt |
5065531 |
T |
|
| Q |
265 |
ccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaa |
364 |
Q |
| |
|
| ||| ||||||| ||||||| || ||||||| ||| |||||| ||||||||||||||||||||| |||||||||| ||||||| |||| | ||||| |
|
|
| T |
5065532 |
caatacttgatactactctctgcccctcctcatcttcaaaggagattaacgcctctctcttatagagctgaatggtggattttgtgtaattttttaccaa |
5065631 |
T |
|
| Q |
365 |
cacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgca---catcattgtcttcaagctacgtccttccacttgagggact |
461 |
Q |
| |
|
|| |||| |||||| | ||||||||| || ||| |||| |||||||||||||| ||| ||||||||||| |||| |||| || |||||||||| |
|
|
| T |
5065632 |
caaatttgtgaggccatcagatgctatgttatccggggttgaagaatagacaatgcatatcattattgtcttcaacatacgccctttcatttgagggact |
5065731 |
T |
|
| Q |
462 |
tcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||| ||||||| |||||| |
|
|
| T |
5065732 |
tcaaaagttacagaagaacctt |
5065753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 145 - 467
Target Start/End: Original strand, 5126592 - 5126917
Alignment:
| Q |
145 |
gtgcatggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaat |
244 |
Q |
| |
|
||||||| ||||||| || ||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
5126592 |
gtgcatgacattgcttcatagtttcaccaattggttcatcatatatgagataaacagctgtcttcttcacaatgaaaccgttcttaaaaacaacaacaat |
5126691 |
T |
|
| Q |
245 |
ctccactctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtc |
344 |
Q |
| |
|
||| ||| ||| |||| ||| ||| ||||||| ||||||| || ||||||| ||| |||||| | |||||||||||||||||||||||||||| | |
|
|
| T |
5126692 |
ctcaactttgttaccagcttctatacttgatactactctctccccctcctcatcttcaaaggagactgctgcctctctcttatagagttgaatggtggcc |
5126791 |
T |
|
| Q |
345 |
tttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcat---tgtcttcaagctac |
441 |
Q |
| |
|
|| |||| |||| ||||||||| || ||||||| |||||| |||| || | |||| |||||||||||||| ||||| | ||||||| ||| |
|
|
| T |
5126792 |
ttcgtgtaatttttcaccaacaagcttgtaaggccatctgatgttatgttatccaaggttgaagaatagacaatgcatatcattactttcttcaacgtac |
5126891 |
T |
|
| Q |
442 |
gtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
| |||| ||||||||| ||||||||| |
|
|
| T |
5126892 |
gccctttcacttgaggtacttcaaaa |
5126917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 150 - 483
Target Start/End: Complemental strand, 5178066 - 5177730
Alignment:
| Q |
150 |
tggcattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctcca |
249 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||||||| ||||||||||| ||| ||| |||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
5178066 |
tggcattgctccattttttctccaattggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctcca |
5177967 |
T |
|
| Q |
250 |
ctctgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgt |
349 |
Q |
| |
|
|| ||| || | |||| ||| ||||||| ||||||| | || |||| ||| ||||||| ||| |||||||||||||| || |||||||||| ||||| |
|
|
| T |
5177966 |
ctttgttacaaggttctatacttgatactactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgt |
5177867 |
T |
|
| Q |
350 |
gtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgca---catcattgtcttcaagctacgtcct |
446 |
Q |
| |
|
|| ||| | ||||||| ||| ||||||| ||||| ||| || || |||| |||||| ||||||| |||||||||||| || | | ||| |
|
|
| T |
5177866 |
gtaattcttaaccaacaagtttgcaaggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcattgtctttaaagtgcaccct |
5177767 |
T |
|
| Q |
447 |
tccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||||||||||||||||| | ||| ||| |||||| |
|
|
| T |
5177766 |
tccacttgagggacttcaaacattaccgaagaacctt |
5177730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 154 - 366
Target Start/End: Complemental strand, 5279887 - 5279675
Alignment:
| Q |
154 |
attgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactct |
253 |
Q |
| |
|
||||||| |||||||| || |||||||||||||||| ||||||||||| ||| ||| |||||||||||| ||| ||||||||||||||| ||||||| | |
|
|
| T |
5279887 |
attgctccattttttctccaattggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccacttt |
5279788 |
T |
|
| Q |
254 |
gtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtga |
353 |
Q |
| |
|
|| || | |||| ||| ||||||| ||||||| | || |||| ||| ||||||| ||| |||||||||||||| || |||||||||| ||||||| | |
|
|
| T |
5279787 |
gttacaaggttctatacttgatactactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaa |
5279688 |
T |
|
| Q |
354 |
tttatcaccaaca |
366 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
5279687 |
ttcttcaccaaca |
5279675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 164 - 467
Target Start/End: Complemental strand, 5098524 - 5098221
Alignment:
| Q |
164 |
tttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgt |
263 |
Q |
| |
|
||||||||| ||| |||||||||||| |||||||||| |||||| |||||||||||||||| | |||||||||| | ||||||| ||| |||| || |
|
|
| T |
5098524 |
tttttcaccaatttgttcatcatataccagataaactgctgtctttttcacaatgaaactgttctcgaaaacaacaatgacctccactttgttaccaggt |
5098425 |
T |
|
| Q |
264 |
tccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcacca |
363 |
Q |
| |
|
|| ||| |||||| || |||| | ||||||| ||| |||||| || ||||| ||||||||||| |||||||||| ||||||||| ||| |||| | |
|
|
| T |
5098424 |
tctatacttgatattaccctctggctctcctcatcttcaaaggagaccaatgcctcactcttatagagctgaatggtggcctttgtgtggtttttcacta |
5098325 |
T |
|
| Q |
364 |
acacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttc |
463 |
Q |
| |
|
||| |||| ||||||| |||| ||| | |||| |||| | ||||||||||||||||||||| ||||||||||| ||||||||||| || |||| |
|
|
| T |
5098324 |
acatgtttttaaggccacttgatatcatgttagctggggttgaagtatagacaatgcacatcattgttttcaagctacggccttccacttggggaacttg |
5098225 |
T |
|
| Q |
464 |
aaaa |
467 |
Q |
| |
|
|||| |
|
|
| T |
5098224 |
aaaa |
5098221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 174 - 483
Target Start/End: Original strand, 5352855 - 5353164
Alignment:
| Q |
174 |
attggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttg |
273 |
Q |
| |
|
||||||| |||||||| ||||||| || ||||||| |||| ||||||| || | ||||||| ||| | ||| ||| |||||||| | |||||| ||| |
|
|
| T |
5352855 |
attggtttatcatataccagataaattgttgtcttcttcacgatgaaacaattctcgaaaacaataaccacctctactttgtcaccaggatccatacttg |
5352954 |
T |
|
| Q |
274 |
ataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttg |
373 |
Q |
| |
|
|||| ||||||| || ||||||| ||| ||||| ||| |||||||||||||| || |||||||| | |||||||| |||| | | ||||||||||| |
|
|
| T |
5352955 |
atactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttagcaacacattttt |
5353054 |
T |
|
| Q |
374 |
aaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactaca |
473 |
Q |
| |
|
||||||| ||| | |||| |||| || |||| | ||||| |||||||||||||||||||||| |||| |||||||| ||||||| | |||| |||| |
|
|
| T |
5353055 |
aaggccatatgaagttatgttattttgggttgacgtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttaca |
5353154 |
T |
|
| Q |
474 |
gaataacctt |
483 |
Q |
| |
|
||| |||||| |
|
|
| T |
5353155 |
gaagaacctt |
5353164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 483
Target Start/End: Complemental strand, 5439173 - 5439005
Alignment:
| Q |
315 |
gcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaataga |
414 |
Q |
| |
|
||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||| | |||||| |||| || || |||| ||||||| |
|
|
| T |
5439173 |
gcctcactcttatagagctgaatggtggcctttgtgtgatttatcaccaatacatttataaggctatctgatgttatgttatccggagttgaagaataga |
5439074 |
T |
|
| Q |
415 |
caatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||||||||| || | |||| |||| ||||||||||||||||||| |||| ||||||| |||||| |
|
|
| T |
5439073 |
caatgcacatcaatgacatcaaattacgcccttccacttgagggacttgaaaagttacagaagaacctt |
5439005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 366
Target Start/End: Original strand, 5242504 - 5242696
Alignment:
| Q |
174 |
attggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttg |
273 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||| ||| | ||||||| ||| |||| |||| ||| || |
|
|
| T |
5242504 |
attggttcatcatatacgagataaactactgtcttcttcacaatgaaactgttctcaaaaacaaaaacgacctccactttgttaccaggttctatacttc |
5242603 |
T |
|
| Q |
274 |
ataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaaca |
366 |
Q |
| |
|
|||| |||||| || | ||||| ||| |||| || || ||||||||||| ||||| |||||||||| |||||||| |||| |||| |||| |
|
|
| T |
5242604 |
atactactctcagccccttctcatcttcaaaggcggctactgcctctctcttgtagagctgaatggtggcctttgtgtaatttttcactaaca |
5242696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 467
Target Start/End: Complemental strand, 5398341 - 5398056
Alignment:
| Q |
182 |
atcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccact |
281 |
Q |
| |
|
|||||||| |||||||||| ||||||| ||||||||||| || | ||||||| |||| ||| ||| ||| |||| |||| ||| ||||||| || |
|
|
| T |
5398341 |
atcatatacaagataaactgttgtcttcttcacaatgaaatcattctcgaaaacaaagacaacctcaactttgttaccaggttctatacttgatactacc |
5398242 |
T |
|
| Q |
282 |
ctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaa |
381 |
Q |
| |
|
|| | || || |||| ||| |||||| |||||||||| ||||||||||| |||||||||| |||||||| ||||||||| |||| |||| ||||||| |
|
|
| T |
5398241 |
ctttgcccctcttcatgttcaaaggagaataacgcctcactcttatagagctgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccac |
5398142 |
T |
|
| Q |
382 |
ctgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
|||| || || | |||| | ||| |||||||||||||||||||||||| |||| |||||||| ||||| ||||||||| |
|
|
| T |
5398141 |
tagatgttacattatccagagttgaagtatacacaatgcacatcattgtcttcaagttacgcccttccacatgaggaacttcaaaa |
5398056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 366
Target Start/End: Original strand, 5688874 - 5689087
Alignment:
| Q |
153 |
cattgctctattttttcaccgattggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactc |
252 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||||| ||||||||||| ||| ||| |||||||||||| ||| |||||||| ||||| ||||||| |
|
|
| T |
5688874 |
cattgctccatattttcacgaattggttcatcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacagaaacaacctccactt |
5688973 |
T |
|
| Q |
253 |
tgtcaccatgttccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtg |
352 |
Q |
| |
|
||| || | |||| ||| ||||||| ||||||| | || |||| ||| |||||| ||| ||||| |||||||| || |||||||||| ||||||| |
|
|
| T |
5688974 |
tgttacaaggttctatacttgatactactctctgtccctcttcatcttcaaaggagactaatgcctcgctcttataaagctgaatggtggcttttgtgta |
5689073 |
T |
|
| Q |
353 |
atttatcaccaaca |
366 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
5689074 |
attcttcaccaaca |
5689087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 179 - 366
Target Start/End: Complemental strand, 5346327 - 5346140
Alignment:
| Q |
179 |
ttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgatacc |
278 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||||||| || ||| |||||| |||| ||||||| ||| |||| |||| ||| ||||||| |
|
|
| T |
5346327 |
ttcatcatatatgagataaattgctgtcttcttcacaatgaaaccattctcaataacaacgacaacctccactttgttaccaggttctatacttgataca |
5346228 |
T |
|
| Q |
279 |
actctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaaca |
366 |
Q |
| |
|
||||||| | ||||||| ||| |||| || || ||||||||||| || || |||||||| | |||||||| |||| ||||||||| |
|
|
| T |
5346227 |
actctctggccctcctcatcttcaaaggcggctactgcctctctcttgtatagctgaatggtagcctttgtgtaatttttcaccaaca |
5346140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 466
Target Start/End: Complemental strand, 5334340 - 5334190
Alignment:
| Q |
315 |
gcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaataga |
414 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||| ||||||||| |||| |||| ||||||| ||||| || || |||| |||| ||||| |
|
|
| T |
5334340 |
gcctcactcttatagagttgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccacttgatg-tacattatctggggttgaattataga |
5334242 |
T |
|
| Q |
415 |
caatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
5334241 |
aaatgcacatcattgtcttcaagttacccccttccacttgaggaacttcaaa |
5334190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 466
Target Start/End: Original strand, 5156007 - 5156297
Alignment:
| Q |
176 |
tggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgat |
275 |
Q |
| |
|
||||||||| |||| |||||||||| ||||||| ||||||||||| | | | ||||||| | | ||||||| ||| |||| |||| | | ||||| |
|
|
| T |
5156007 |
tggttcatcgtatacaagataaactgttgtcttcttcacaatgaaattaatctcgaaaacaaaatggacctccactttgttaccaggttctagacttgat |
5156106 |
T |
|
| Q |
276 |
accactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaa |
375 |
Q |
| |
|
|| || |||| || || |||| ||| ||||||| || ||||| |||||||| || |||||||||| |||||||| |||| ||| |||| |||| || |
|
|
| T |
5156107 |
actaccctctgcccctcttcatcttcaaaggaggccaatgcctcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatgtttttaa |
5156206 |
T |
|
| Q |
376 |
ggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
||||| ||| || || |||| |||| | |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
5156207 |
ggccactacatgttacattatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaa |
5156297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 466
Target Start/End: Original strand, 5072674 - 5072966
Alignment:
| Q |
174 |
attggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttg |
273 |
Q |
| |
|
|||| |||||| ||||||||||||| | |||||| ||||||||||| ||| ||| |||||| |||| ||||||| || |||| | || ||| ||| |
|
|
| T |
5072674 |
attgattcatcgtatatgagataaattattgtctttttcacaatgaaatcgttctcaacaacaacgacaacctccacttggttaccaggctctatacttg |
5072773 |
T |
|
| Q |
274 |
ataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttg |
373 |
Q |
| |
|
|||| | ||||| | || |||| || |||||| ||| |||||||||||||| ||||||||||||| || |||| |||| |||||| || |||| |
|
|
| T |
5072774 |
atactaatctctcgccctcatcatctttgaaggagactaatgcctctctcttatatagttgaatggtggctttagtgtaatttttcaccatcaagttttt |
5072873 |
T |
|
| Q |
374 |
aaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||||||||| ||| |||||||||||||| | || ||||||||||||||||||||||| |
|
|
| T |
5072874 |
aaggccgtctgatactacattatttggtggtgaagaatagacaacgcatatcattgtcttcaatatgcgcccttccacttgagggacttcaaa |
5072966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 483
Target Start/End: Complemental strand, 5448765 - 5448603
Alignment:
| Q |
321 |
ctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgc |
420 |
Q |
| |
|
|||||||||| ||||||||| | |||||||| |||| ||||||||||||||| ||||||| |||| || || |||| |||| | ||||||||||| |
|
|
| T |
5448765 |
ctcttatagatttgaatggtagcctttgtgtaatttttcaccaacacatttttaaggccactagatgttacattatctggggttgaagtatagacaatgc |
5448666 |
T |
|
| Q |
421 |
acatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||| || | |||| ||| ||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
5448665 |
acatcaatgacgtcaattgacgctcttccacttgagggacttcaaaagttacagaagaacctt |
5448603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 2938976 - 2938920
Alignment:
| Q |
410 |
atagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
2938976 |
atagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaa |
2938920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 457
Target Start/End: Original strand, 5124579 - 5124719
Alignment:
| Q |
318 |
tctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttga-tgaatagaca |
416 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||| | ||||||||| ||| || | | |||||||||| |
|
|
| T |
5124579 |
tctctcttatagagttgaatggtccccttcgtgtaatttttcaccatcacagttttaaggccatccgatgctatgtttttttggagtcaatgaatagaca |
5124678 |
T |
|
| Q |
417 |
atgcacatcattgtcttcaagctacgtccttccacttgagg |
457 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||| ||||||||| |
|
|
| T |
5124679 |
atgcacattattgtctttaagttacgtccttacacttgagg |
5124719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 315 - 466
Target Start/End: Complemental strand, 5351562 - 5351411
Alignment:
| Q |
315 |
gcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaataga |
414 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||||||| |||| |||| |||| |||| ||||||| ||||| || | | ||| |||| | ||||| |
|
|
| T |
5351562 |
gcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttaccaggggttgaagtataga |
5351463 |
T |
|
| Q |
415 |
caatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
| ||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
5351462 |
ctatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
5351411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 356
Target Start/End: Complemental strand, 5427203 - 5427021
Alignment:
| Q |
174 |
attggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttg |
273 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||||||| ||| | ||||| | ||| |||| |||| ||| ||| |
|
|
| T |
5427203 |
attggttcatcatatacgagataaactactgtcttcgtcacaacgaaactgttctcaaaaacaaaaacgacctccattttgttaccaggttctatacttg |
5427104 |
T |
|
| Q |
274 |
ataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgattt |
356 |
Q |
| |
|
|||| ||||| | || ||||||| ||| || || ||| |||| |||||||| || |||||| ||| |||||||| |||| |
|
|
| T |
5427103 |
atactactctttccccctcctcatcttcaaatgacactaatacctcactcttataaagctgaatgatggcctttgtgtaattt |
5427021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 483
Target Start/End: Original strand, 23127306 - 23127611
Alignment:
| Q |
178 |
gttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgatac |
277 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||| |||||| ||||| || ||||||| ||||||| ||||| | ||| |||| |||| | ||||||| |
|
|
| T |
23127306 |
gttcatcatatacaagataaactgttgtattcttcacaacgaaaccattctcaaaaacgacaacaacctccattttgttaccaggttctgcacttgatac |
23127405 |
T |
|
| Q |
278 |
cactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaagg |
377 |
Q |
| |
|
| ||||||| |||||||| ||| || ||| ||| | |||||||||||||| |||||||| |||||||| |||| | |||||||| |||| || | |
|
|
| T |
23127406 |
taagctcttcccttcctcatcttcgaacgagactaatgtctctctcttatagatctgaatggtaccctttgtgtaattttttaccaacacgtttttaacg |
23127505 |
T |
|
| Q |
378 |
ccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaat |
477 |
Q |
| |
|
||| | || | ||| || |||| |||| | || ||||| ||||| |||||||||| | || | |||||||||||||| |||||||| ||||||| |
|
|
| T |
23127506 |
ccatccgaggtaatgttatctggggttgaagtattgacaacacacattattgtcttcacgttatgcccttccacttgaggagcttcaaaacttacagaag |
23127605 |
T |
|
| Q |
478 |
aacctt |
483 |
Q |
| |
|
|||||| |
|
|
| T |
23127606 |
aacctt |
23127611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 5253827 - 5253759
Alignment:
| Q |
183 |
tcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccact |
251 |
Q |
| |
|
||||||||||||||||||| ||| || |||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
5253827 |
tcatatatgagataaactgtcgtcctcttcacaatgaaactgttctcaaaaacaacaacaaactccact |
5253759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 483
Target Start/End: Original strand, 5180773 - 5181075
Alignment:
| Q |
181 |
catcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccac |
280 |
Q |
| |
|
||||||||| ||||||| || ||||||| ||||||||||||| || ||||||||| ||| | ||||||| ||| ||| |||| || ||||||| || |
|
|
| T |
5180773 |
catcatataccagataaattgctgtcttcttcacaatgaaacttttctcaaaaacaaaaacgacctccactttgttaccgggttctatgcttgatactac |
5180872 |
T |
|
| Q |
281 |
tctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggcca |
380 |
Q |
| |
|
|||| | || |||| ||| || ||| ||||| || ||||||||||| |||||||| | |||||||| |||| | || |||| |||| ||||||| |
|
|
| T |
5180873 |
cctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatttttaactaacatgtttttaaggcca |
5180972 |
T |
|
| Q |
381 |
actgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataac |
480 |
Q |
| |
|
||||| || || ||| |||| |||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||| |
|
|
| T |
5180973 |
cttgatgttacattatgtggagttgaattatagacaacgagcatcattgtcttcaagttacgtccttccaccaaagggacttcaaaagttacagaagaac |
5181072 |
T |
|
| Q |
481 |
ctt |
483 |
Q |
| |
|
||| |
|
|
| T |
5181073 |
ctt |
5181075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 483
Target Start/End: Original strand, 5283223 - 5283513
Alignment:
| Q |
181 |
catcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccac |
280 |
Q |
| |
|
||||||||| ||||||| || ||||||| ||||||||||||||||| ||||||||| | | ||||||| ||| ||| |||| ||| |||||| || |
|
|
| T |
5283223 |
catcatataccagataaattgctgtcttcttcacaatgaaactgttttcaaaaacaaatatgacctccactttgttacctggttcgatacttgatattac |
5283322 |
T |
|
| Q |
281 |
tctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggcca |
380 |
Q |
| |
|
|||| ||| ||||||||| ||| |||| || || || || ||||||||||| ||||||| |||||||| |||| |||| ||||| ||| || || | |
|
|
| T |
5283323 |
cctctgcca---ctcattttcaaagtaggaaaatgcatcactattatagagttggatggtggcctttgtgtaatttttcactaacacgtttctaaagcta |
5283419 |
T |
|
| Q |
381 |
actgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataac |
480 |
Q |
| |
|
|| | | ||| ||| |||| | |||||||||||||||||||| ||||||| ||| ||||| ||||||||||| |||||| ||||||| ||| |
|
|
| T |
5283420 |
-----tgtt-tacca---ggggttgaagtatagacaatgcacatcattgacttcaagttacacccttcaacttgagggacatcaaaagttacagaagaac |
5283510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 5372162 - 5372108
Alignment:
| Q |
412 |
agacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaa |
466 |
Q |
| |
|
||||| ||||||| |||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
5372162 |
agacattgcacataattgtcttcaagttacgcccttccacttgaggaacttcaaa |
5372108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 483
Target Start/End: Original strand, 5256378 - 5256451
Alignment:
| Q |
410 |
atagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||||||||||||||||| | ||||| |||| ||||| |||| |||||||||||| ||||||| |||||| |
|
|
| T |
5256378 |
atagacaatgcacatcattgacatcaagttacgcccttcaacttcggggacttcaaaagttacagaagaacctt |
5256451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 483
Target Start/End: Complemental strand, 5426967 - 5426894
Alignment:
| Q |
410 |
atagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactacagaataacctt |
483 |
Q |
| |
|
|||||| |||||||| |||||||||| | |||| ||||||||||| || |||| |||| ||||||| |||||| |
|
|
| T |
5426967 |
atagactatgcacataattgtcttcaggttacgcccttccacttgtggaacttgaaaagttacagaagaacctt |
5426894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 485
Target Start/End: Original strand, 36212913 - 36213224
Alignment:
| Q |
174 |
attggttcatcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttg |
273 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| ||||||||||| |||| ||||||||||||||| ||||| | | |||||| |||| ||| ||| |
|
|
| T |
36212913 |
attggttcatcataaatgagataaatcgctgtcttcttcacaatgaaattgttctcaaaaacaacaacaacctccattttatcaccaggttctatacttg |
36213012 |
T |
|
| Q |
274 |
ataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttg |
373 |
Q |
| |
|
|||| | ||||| || ||||||| ||| || ||| ||| |||||||||||||||| |||||||| | ||||||||||||| | |||| ||| |||| |
|
|
| T |
36213013 |
atactaatctctgcccctcctcatcttcaaatgagactaatgcctctctcttatagatctgaatggtagcctttgtgtgattttttaccatcacgttttt |
36213112 |
T |
|
| Q |
374 |
aaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaaactaca |
473 |
Q |
| |
|
||| ||| ||||||||||| | ||| |||| ||||||||||| ||||| |||||||| ||| ||||||| |||||| ||||||| ||||||| |||| |
|
|
| T |
36213113 |
aagtccatctgatgctatgttttctggagttgaagaatagacaatacacattattgtctttaagttacgtccatccactcgagggacatcaaaaattaca |
36213212 |
T |
|
| Q |
474 |
gaataacctttg |
485 |
Q |
| |
|
||| |||||||| |
|
|
| T |
36213213 |
gaagaacctttg |
36213224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 18936616 - 18936568
Alignment:
| Q |
318 |
tctctcttatagagttgaatggtggtctttgtgtgatttatcaccaaca |
366 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| |||||||||||||| |
|
|
| T |
18936616 |
tctctcttatagagctgaatggtgttctttgtgcaatttatcaccaaca |
18936568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 86; Significance: 7e-41; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 182 - 467
Target Start/End: Original strand, 47985393 - 47985678
Alignment:
| Q |
182 |
atcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccact |
281 |
Q |
| |
|
|||||||| |||||||||| | || || |||||||||||| || ||||||||||||| | ||||||| ||| ||| |||| ||| ||||||| ||| |
|
|
| T |
47985393 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
47985492 |
T |
|
| Q |
282 |
ctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaa |
381 |
Q |
| |
|
|||| || ||||||| | | |||||| ||| | ||| |||||||||||||||||| ||| |||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
47985493 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
47985592 |
T |
|
| Q |
382 |
ctgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
|||||| |||| ||| || | |||| | |||||||||||||||||||||||| ||| || | | |||||||||||||||||||||| |
|
|
| T |
47985593 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaa |
47985678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 182 - 467
Target Start/End: Original strand, 48003967 - 48004252
Alignment:
| Q |
182 |
atcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccact |
281 |
Q |
| |
|
|||||||| |||||||||| | || || |||||||||||| || ||||||||||||| | ||||||| ||| ||| |||| ||| ||||||| ||| |
|
|
| T |
48003967 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
48004066 |
T |
|
| Q |
282 |
ctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaa |
381 |
Q |
| |
|
|||| || ||||||| | | |||||| ||| | ||| |||||||||||||||||| ||| |||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
48004067 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
48004166 |
T |
|
| Q |
382 |
ctgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
|||||| |||| ||| || | |||| | |||||||||||||||||||||||| ||| || | | |||||||||||||||||||||| |
|
|
| T |
48004167 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaa |
48004252 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 467
Target Start/End: Original strand, 47994680 - 47994965
Alignment:
| Q |
182 |
atcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccact |
281 |
Q |
| |
|
|||||||| |||||||||| | || || |||||||||||| || ||||||||||||| | ||||||| ||| ||| ||| ||| ||||||| ||| |
|
|
| T |
47994680 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
47994779 |
T |
|
| Q |
282 |
ctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaa |
381 |
Q |
| |
|
|||| || ||||||| | | |||||| ||| | ||| |||||||||||||||||| ||| |||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
47994780 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
47994879 |
T |
|
| Q |
382 |
ctgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
|||||| |||| ||| || | |||| | |||||||||||||||||||||||| ||| || | | |||||||||||||||||||||| |
|
|
| T |
47994880 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaa |
47994965 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 467
Target Start/End: Original strand, 48013252 - 48013537
Alignment:
| Q |
182 |
atcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactctgtcaccatgttccatatttgataccact |
281 |
Q |
| |
|
|||||||| |||||||||| | || || |||||||||||| || ||||||||||||| | ||||||| ||| ||| ||| ||| ||||||| ||| |
|
|
| T |
48013252 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
48013351 |
T |
|
| Q |
282 |
ctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaa |
381 |
Q |
| |
|
|||| || ||||||| | | |||||| ||| | ||| |||||||||||||||||| ||| |||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
48013352 |
ctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccat |
48013451 |
T |
|
| Q |
382 |
ctgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
467 |
Q |
| |
|
|||||| |||| ||| || | |||| | |||||||||||||||||||||||| ||| || | | |||||||||||||||||||||| |
|
|
| T |
48013452 |
ctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaa |
48013537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 467
Target Start/End: Complemental strand, 8879660 - 8879539
Alignment:
| Q |
346 |
ttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtcc |
445 |
Q |
| |
|
||||||||||||| ||||||| ||||| || ||| ||||| | || || |||| |||||| |||||||||||||||||| | ||||||| | | || |
|
|
| T |
8879660 |
ttgtgtgatttataaccaacatattttttagtccatctgatattgtgttatctggggttgatgtatagacaatgcacatcatcgacttcaagtttctccc |
8879561 |
T |
|
| Q |
446 |
ttccacttgagggacttcaaaa |
467 |
Q |
| |
|
||| |||||||| |||| |||| |
|
|
| T |
8879560 |
ttcaacttgaggaactttaaaa |
8879539 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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