View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6900_low_3 (Length: 1129)
Name: NF6900_low_3
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6900_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 809; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 809; E-Value: 0
Query Start/End: Original strand, 5 - 1117
Target Start/End: Original strand, 39984569 - 39985681
Alignment:
| Q |
5 |
gcagcgcccatgtcaggacctgcaccaccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctg |
104 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| | |
|
|
| T |
39984569 |
gcagcacccatgtcaggacctgcaccaccttggtacatcttggcaatgatagggttgcagacaccttcaagttccttcatcttgtcctcaaactcatcag |
39984668 |
T |
|
| Q |
105 |
cctctgcaagctggttagcatctagccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtc |
204 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || || |
|
|
| T |
39984669 |
cctctgcaagctggttggcatctagccactggatagcagcctcaatggtgtcctcgatcttctttttgtcatccgaatcaagctttcctgcaattttttc |
39984768 |
T |
|
| Q |
205 |
atccttaattgtgttcctcatgttgtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctct |
304 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
39984769 |
atccttaatggtgttcctcatgttgtatgcatagttttccaatgcattcttggcctcgaccttcttcttatgctcttcatcttccgacttgtacttctct |
39984868 |
T |
|
| Q |
305 |
gcctcttgaaccatcttctcaatatcttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttgtcttcagcag |
404 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||||||| || || ||||||||||| |||| |
|
|
| T |
39984869 |
gcctcttgaaccatcttctcaatgtcttcctttgaaagtctacccttgtcattggtgatggtgattttgttcttctggccagttgttttgtcttctgcag |
39984968 |
T |
|
| Q |
405 |
agacattcaagataccattggcatcaatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgcccaa |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
39984969 |
agacattcaagataccattggcatcaatgtcaaagcacacagtgatttggggaacacctctgggggcaggaggaatgccggaaagttcaaacttgcccaa |
39985068 |
T |
|
| Q |
505 |
caaattgttatctcttgtccttgtcctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttcttt |
604 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| || || ||||||||||| |||||||||||| |
|
|
| T |
39985069 |
caaattgttgtctcttgttcttgtcctctctccttcaaaaacttggatcaacacgccaggctggttgtcagaatatgtagagaaaacctgttctttcttt |
39985168 |
T |
|
| Q |
605 |
gttggaatagtggtattccttggaataaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcct |
704 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39985169 |
gttggaatagtggtattccttgggataagcacagtcatcacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcct |
39985268 |
T |
|
| Q |
705 |
gaaccttctcgttgccttcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttcc |
804 |
Q |
| |
|
|||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
39985269 |
gaaccttctcattgccctcaccactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgcatagctcctttcc |
39985368 |
T |
|
| Q |
805 |
gtttaagaaatcctgaagaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatct |
904 |
Q |
| |
|
||| |||||||| || | ||||||||| ||||| ||||||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||| |
|
|
| T |
39985369 |
gttaaagaaatcttgcaaaagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcgtggacacttttcttgtccatcttggcatct |
39985468 |
T |
|
| Q |
905 |
cttaaacatttctcaactggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccct |
1004 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| | |
|
|
| T |
39985469 |
ctcaaacatttctcaactggctccatacattttctaaagagatccatgttgagctcctcaaatcttgcacgagtaatgggggagtagaaatcaattcctt |
39985568 |
T |
|
| Q |
1005 |
caaacagagaatcaatttcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggtt |
1104 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39985569 |
caaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttctcttcgctctttcacaagcagtcctcaacctcctaagagctctggggtt |
39985668 |
T |
|
| Q |
1105 |
gccactgatgtcc |
1117 |
Q |
| |
|
||||||||||||| |
|
|
| T |
39985669 |
gccactgatgtcc |
39985681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 29 - 1110
Target Start/End: Complemental strand, 8018634 - 8017553
Alignment:
| Q |
29 |
ccaccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgcaagctggttagcatcta |
128 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| | || || | |||||||||||| || ||||||||||| |||||||| | ||||||| || | |
|
|
| T |
8018634 |
ccaccttgatacatcttggcaatgattgggttgcaaaggctctcaagttccttcatcttatcttcaaactcatcagcctctgccaactggttactgtcca |
8018535 |
T |
|
| Q |
129 |
gccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatccttaattgtgttcctcatgtt |
228 |
Q |
| |
|
|||||| || ||||| ||||| | || ||||||||||| ||||| || | ||||||| ||||||| || || |||||||||||||||||||| |
|
|
| T |
8018534 |
accactgaattgcagcgtcaattgcatcatcaatcttctttttgtcctcaggtgaaagctttgaaccaatcttctcgtctttaattgtgttcctcatgtt |
8018435 |
T |
|
| Q |
229 |
gtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctcttgaaccatcttctcaata |
328 |
Q |
| |
|
||| || || |||||||| |||||||| || || |||||||| || ||||| || || || | |||||| || ||||| || | ||||||||||||||| |
|
|
| T |
8018434 |
gtaagcgtagttttccaaagcattctttgcatcaaccttctttttgtgttcctcgtcttcagccttgtatttttctgcttcctcaaccatcttctcaatt |
8018335 |
T |
|
| Q |
329 |
tcttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttgtcttcagcagagacattcaagataccattggcat |
428 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||||||||| |||||||| || || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8018334 |
tcttccttagacaacctacctttgtcattggtgatggtaatcttgttcttctgcccagttgttttgtcctcagcagagacattcaagataccattggcat |
8018235 |
T |
|
| Q |
429 |
caatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgcccaacaaattgttatctcttgtccttgt |
528 |
Q |
| |
|
||||||| ||||| || ||||| || |||||||| | || || ||||||||||| ||||| || || || |||||||| ||||| ||||| || |||| |
|
|
| T |
8018234 |
caatgtcgaagcaaactgtgatttgaggaacaccacggggtgctggaggaatgccagaaagctcgaattttcccaacaagttgttgtctctggttcttgc |
8018135 |
T |
|
| Q |
529 |
cctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttctttgttggaatagtggtattccttgga |
628 |
Q |
| |
|
||||| |||||| | |||||||||||||||||||| ||||| || ||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||| |
|
|
| T |
8018134 |
tctctcaccttcataaacttggatcaacacaccaggttggttatctgagtaagtagagaaaacttgctccttcttggttggaattgtggtgttccttgga |
8018035 |
T |
|
| Q |
629 |
ataaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcgttgccttcaccac |
728 |
Q |
| |
|
|| | |||||||| |||||||||||||| || | ||| ||||| | || |||||||||||||| || | ||| |||||||| || ||||||||||||| |
|
|
| T |
8018034 |
attaatacagtcatgacaccaccagcagtttctagacccagagacaatggagtgacatccaaaagcagcaaatcttgaaccttttcattgccttcaccac |
8017935 |
T |
|
| Q |
729 |
tcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttg |
828 |
Q |
| |
|
|||||||||| || || |||||||||||||| ||||||||||| || || || || |||||||| ||||| || || || |||||||| || | ||||| |
|
|
| T |
8017934 |
tcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttg |
8017835 |
T |
|
| Q |
829 |
ttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctcc |
928 |
Q |
| |
|
|| || || |||||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
8017834 |
ctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaacacttctcaacaggctcc |
8017735 |
T |
|
| Q |
929 |
atacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttcaatgg |
1028 |
Q |
| |
|
||||| || || || ||||||||||| || || |||||||| ||||| || || | || ||| || |||| |||||||||| ||||||||| ||||||| |
|
|
| T |
8017734 |
atacactttctgaacagatccatgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatgg |
8017635 |
T |
|
| Q |
1029 |
tggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccact |
1110 |
Q |
| |
|
| || || ||||||||||| || ||||||||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8017634 |
tagtttgtgcagtagaagagagagttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccact |
8017553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 29 - 1092
Target Start/End: Original strand, 8101614 - 8102677
Alignment:
| Q |
29 |
ccaccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgcaagctggttagcatcta |
128 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| |||| | || | |||||||||||||| ||||||||||| || || ||||||||||| ||||| | |
|
|
| T |
8101614 |
ccaccttggtacatctttgcaatgattgggttacagattgtctcaagctccttcatcttgtcttcaaactcatcggcttcagcaagctggtttgcatcaa |
8101713 |
T |
|
| Q |
129 |
gccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatccttaattgtgttcctcatgtt |
228 |
Q |
| |
|
|||| || || || ||||||| | |||||||||| ||||||||| | ||||||| ||||| || || ||||| ||||| |||||||| |
|
|
| T |
8101714 |
gccattgaatggctccctcaattgcatcctcaatctgcttcttgtctcctcctgaaagctttgaactgatcttctcgtctttaatggtgtttctcatgtt |
8101813 |
T |
|
| Q |
229 |
gtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctcttgaaccatcttctcaata |
328 |
Q |
| |
|
||||||||| || ||||| | ||||| ||||| ||||||||||| || || ||||| || |||||| |||||||| ||||| ||||||||||| || |
|
|
| T |
8101814 |
gtatgcatagttctccaaggagttctttgcctcaaccttcttcttgtgctcctcatcttcactcttgtatttctctgcttcttggaccatcttctcgatt |
8101913 |
T |
|
| Q |
329 |
tcttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttgtcttcagcagagacattcaagataccattggcat |
428 |
Q |
| |
|
|||||||| || | || ||||| || ||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8101914 |
tcttcctttgacaaccttcccttatcgttggtgatggtaatcttgttcttctgcccggttgttttgtcctcagcagagacattcaagataccattggcat |
8102013 |
T |
|
| Q |
429 |
caatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgcccaacaaattgttatctcttgtccttgt |
528 |
Q |
| |
|
|||| ||||| || ||||||||||| |||||||| | || || |||||||| || ||||| |||||||| |||||||| |||||||| | || || || |
|
|
| T |
8102014 |
caatatcaaaacaaacagtgatctgaggaacaccgcggggtgctggaggaattccggaaagctcaaacttacccaacaagttgttatccttggttctggt |
8102113 |
T |
|
| Q |
529 |
cctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttctttgttggaatagtggtattccttgga |
628 |
Q |
| |
|
||||| |||||| | ||||||||||| |||||||| |||||||| || || |||||||||||||| || ||||| |||||||| || || ||||||||| |
|
|
| T |
8102114 |
tctctcaccttcataaacttggatcaaaacaccaggttggttgtctgaatacgtagagaaaacttgctccttcttggttggaatggtagtgttccttgga |
8102213 |
T |
|
| Q |
629 |
ataaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcgttgccttcaccac |
728 |
Q |
| |
|
|| | |||||||| ||||| || |||||||||||||| |||| | ||||||||||||||||| | | ||| ||||||||||| || |||||||||| |
|
|
| T |
8102214 |
atcaatacagtcatgacacctcctgcagtctccaaaccttgagacaatggggtgacatccaaaagcaacaaatcttgaaccttctcatttccttcaccac |
8102313 |
T |
|
| Q |
729 |
tcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttg |
828 |
Q |
| |
|
|||| || ||||| ||||||||||||||||| ||||||||||| || || || ||||| |||||||||||||| || || ||||| || || | ||||| |
|
|
| T |
8102314 |
tcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttg |
8102413 |
T |
|
| Q |
829 |
ttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctcc |
928 |
Q |
| |
|
|| || || ||||| || ||||| |||||||| || |||||||||||||| | |||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
8102414 |
ctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatctctcaaacacttctcaacaggctcc |
8102513 |
T |
|
| Q |
929 |
atacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttcaatgg |
1028 |
Q |
| |
|
||||| ||||| || ||||||||||| || || |||||||||||||| || || | || ||| || |||| |||||||||| ||||||||| ||||||| |
|
|
| T |
8102514 |
atacacttcctgaacagatccatgttaagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatgg |
8102613 |
T |
|
| Q |
1029 |
tggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaag |
1092 |
Q |
| |
|
| || || || || || || || ||||||||||| || || || || || ||||| |||||||| |
|
|
| T |
8102614 |
tagtttgtgcggttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaag |
8102677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 737 - 921
Target Start/End: Original strand, 17259896 - 17260080
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgttggacct |
836 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||| || || ||||||||||||| ||||| || || ||||||||||| | ||||| || || | |
|
|
| T |
17259896 |
gcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcactt |
17259995 |
T |
|
| Q |
837 |
taggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
| ||||| || | ||||||||||| ||||||||||||| || || ||||||| |||||| |||| || | ||| |||||||| |
|
|
| T |
17259996 |
tcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaac |
17260080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 737 - 921
Target Start/End: Original strand, 17267594 - 17267778
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgttggacct |
836 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||| || || || || ||||||| ||||| || || ||||| | ||| | ||||| || || | |
|
|
| T |
17267594 |
gcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcactt |
17267693 |
T |
|
| Q |
837 |
taggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
| ||||| || | || |||||||| ||||||||||||| ||| || ||||||| ||||||||||| || | ||| |||||||| |
|
|
| T |
17267694 |
tcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaac |
17267778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 737 - 794
Target Start/End: Original strand, 8545288 - 8545345
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcata |
794 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||||| || |||||||||||||||| |
|
|
| T |
8545288 |
gcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcata |
8545345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 726 - 774
Target Start/End: Complemental strand, 10494898 - 10494850
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatc |
774 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10494898 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
10494850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 726 - 774
Target Start/End: Complemental strand, 13333892 - 13333844
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatc |
774 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
13333892 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
13333844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 737 - 794
Target Start/End: Original strand, 8581355 - 8581412
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcata |
794 |
Q |
| |
|
|||||||||| ||| |||||||| |||||||||||||| || || ||||||||||||| |
|
|
| T |
8581355 |
gcagcctgaatagcagcaccataagcaacagcctcatcagggttgatgctcttgcata |
8581412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 771
Target Start/End: Original strand, 8667063 - 8667108
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctc |
771 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
8667063 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctc |
8667108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 726 - 774
Target Start/End: Original strand, 8654094 - 8654142
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatc |
774 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
8654094 |
cactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatc |
8654142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 737 - 792
Target Start/End: Complemental strand, 27831388 - 27831333
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgca |
792 |
Q |
| |
|
|||||||| ||||| |||||| | |||||||||||||| ||||| ||||||||||| |
|
|
| T |
27831388 |
gcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgca |
27831333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1055 - 1113
Target Start/End: Original strand, 8609890 - 8609948
Alignment:
| Q |
1055 |
ctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgat |
1113 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||||||||| || | ||| |||||||| |
|
|
| T |
8609890 |
ctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgat |
8609948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 737 - 786
Target Start/End: Complemental strand, 7878246 - 7878197
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgct |
786 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||| || ||||| |
|
|
| T |
7878246 |
gcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgct |
7878197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 854 - 903
Target Start/End: Original strand, 8576098 - 8576147
Alignment:
| Q |
854 |
ccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatc |
903 |
Q |
| |
|
|||||||| ||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
8576098 |
ccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 737 - 786
Target Start/End: Original strand, 8590293 - 8590342
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgct |
786 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
8590293 |
gcagcttgaacagctgcaccataagcaacagcctcatctggattgatgct |
8590342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 317; Significance: 1e-178; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 30 - 1110
Target Start/End: Complemental strand, 23588953 - 23587873
Alignment:
| Q |
30 |
caccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgcaagctggttagcatctag |
129 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||| | | |||| |||||||||||||||||||| ||||| |||||| |||| || || |||| | |
|
|
| T |
23588953 |
caccttgatacatccttgcaatgatagggttgcaaatgccctccagctccttcatcttgtcctcaaattcatcagcctctccaagttgatttccatccaa |
23588854 |
T |
|
| Q |
130 |
ccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatccttaattgtgttcctcatgttg |
229 |
Q |
| |
|
||| || ||||| ||||||| | || ||||| |||||||| ||||| | | | ||| ||||||||||| || || |||||||||||||||||| |
|
|
| T |
23588853 |
ccattgaatagccccctcaatagcatcttcaattttcttcttatcatcagcagacaacttcgaagcaatcttgtcgtctttgattgtgttcctcatgttg |
23588754 |
T |
|
| Q |
230 |
tatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctcttgaaccatcttctcaatat |
329 |
Q |
| |
|
|| ||||| || || | ||||||||||||||| || ||||| || || || || ||||| ||||||||||| || || || || |||||||||||||| | |
|
|
| T |
23588753 |
taggcatagttctcaagtgcattcttggcctccactttctttttgtgctcctcgtcctcagacttgtacttttcagcttcctgcaccatcttctcaattt |
23588654 |
T |
|
| Q |
330 |
cttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttgtcttcagcagagacattcaagataccattggcatc |
429 |
Q |
| |
|
||||||| || || |||||||||||||||||||| |||||||| || ||||| || || || ||||| || || ||||||||||| || ||||||||||| |
|
|
| T |
23588653 |
cttccttggagagcctacccttgtcattggtgattgtaatcttgtttttctgccctgttgtcttgtcctctgctgagacattcaaaatgccattggcatc |
23588554 |
T |
|
| Q |
430 |
aatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgcccaacaaattgttatctcttgtccttgtc |
529 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||||||||||| || || || | |||||||||||||||||||||||||| | |||||||| |
|
|
| T |
23588553 |
aatgtcaaagcagacagtgatctgaggaacaccccttggagcaggagggatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgtt |
23588454 |
T |
|
| Q |
530 |
ctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttctttgttggaatagtggtattccttggaa |
629 |
Q |
| |
|
|| || |||||| ||||||| |||||||||||||| || || || |||||||| || || ||||| || ||||| || ||||| || || || || |||| |
|
|
| T |
23588453 |
ctttcgccttcatagacttgaatcaacacaccaggttgattatcagagtaggttgaaaacacttgctccttcttggtaggaatggttgtgtttctaggaa |
23588354 |
T |
|
| Q |
630 |
taaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcgttgccttcaccact |
729 |
Q |
| |
|
| | |||||||| ||||| || || |||||||||||||| || ||||| || ||||||| | | |||||||| || ||||| ||||| |||||||| |
|
|
| T |
23588353 |
tcaatacagtcatgacacctcctgcggtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccact |
23588254 |
T |
|
| Q |
730 |
caaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgt |
829 |
Q |
| |
|
|||||| ||||| || || || || |||||||||||||| ||||| || || |||||||| || ||||||||||| || |||||||| || | ||||||| |
|
|
| T |
23588253 |
caaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgt |
23588154 |
T |
|
| Q |
830 |
tggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctcca |
929 |
Q |
| |
|
|| ||||| ||||| || || ||||||||||| || ||||||||||| || || ||||| |||||||||||||| || ||||| |||||||| ||||||| |
|
|
| T |
23588153 |
tgaaccttgggaatcctagtggatccaccaacaagaacaacatcatggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctcca |
23588054 |
T |
|
| Q |
930 |
tacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttcaatggt |
1029 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| | || || || |||| | ||| |||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
23588053 |
tacacttcctaaacagatccatgttgagctcttcaaaacgagcccgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggt |
23587954 |
T |
|
| Q |
1030 |
ggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccact |
1110 |
Q |
| |
|
||| || |||||||| || ||||| ||||| || || ||||||||||| ||||| || |||||||| ||||| || ||||| |
|
|
| T |
23587953 |
ggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccact |
23587873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 30 - 1110
Target Start/End: Complemental strand, 23597805 - 23596725
Alignment:
| Q |
30 |
caccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgcaagctggttagcatctag |
129 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||| | || |||| |||||||||||||||||||| ||||| |||||| |||| || || |||| | |
|
|
| T |
23597805 |
caccttgatacatccttgcaatgatagggttgcaaataccctccagctccttcatcttgtcctcaaattcatcagcctctccaagttgatttccatccaa |
23597706 |
T |
|
| Q |
130 |
ccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatccttaattgtgttcctcatgttg |
229 |
Q |
| |
|
||| || ||||| ||||||| | || ||||| |||||||| ||||| | | ||| ||||||||||| || || |||||||||||||||||| |
|
|
| T |
23597705 |
ccattgaatagccccctcaatagcatcttcaattttcttcttatcatcagccgacaacttcgaagcaatcttgtcgtctttgattgtgttcctcatgttg |
23597606 |
T |
|
| Q |
230 |
tatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctcttgaaccatcttctcaatat |
329 |
Q |
| |
|
|| ||||| || || | ||||| |||||||| |||||| | || || || ||||||||||| |||||||| || || || || ||||| |||||||| | |
|
|
| T |
23597605 |
taggcatagttctcaagcgcatttttggcctccaccttccttttgtgctcctcatcctcggatttgtacttttccgcttcctgcaccattttctcaatgt |
23597506 |
T |
|
| Q |
330 |
cttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttgtcttcagcagagacattcaagataccattggcatc |
429 |
Q |
| |
|
| ||||| || || ||||||||||||||||| || |||||||| || || || ||||| || ||||| || || ||||||||||| || ||||||||||| |
|
|
| T |
23597505 |
cctccttggagagcctacccttgtcattggtaattgtaatcttgtttttttgcccggttgtcttgtcctctgctgagacattcaaaatgccattggcatc |
23597406 |
T |
|
| Q |
430 |
aatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgcccaacaaattgttatctcttgtccttgtc |
529 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| |||||||||||||| || || || |||||||||||||||||||||||||| | |||||||| |
|
|
| T |
23597405 |
gatgtcaaagcagacagtgatctgaggaacaccccttggagcaggaggaatacccgacagctcaaacttgcccaacaaattgttatcacgagtccttgtt |
23597306 |
T |
|
| Q |
530 |
ctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttctttgttggaatagtggtattccttggaa |
629 |
Q |
| |
|
|| |||||||| |||| || |||| ||||||||| ||||| || || ||||| || || || || || ||||| || ||||| || || || || |||| |
|
|
| T |
23597305 |
ctttctccttcgtagacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaa |
23597206 |
T |
|
| Q |
630 |
taaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcgttgccttcaccact |
729 |
Q |
| |
|
| | |||||||| || || || ||||||||||||||||| || ||||| || ||||||| | | ||||||||| || ||||| |||||||| || || |
|
|
| T |
23597205 |
ttaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgct |
23597106 |
T |
|
| Q |
730 |
caaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgt |
829 |
Q |
| |
|
|||||| ||||| || || || || ||||| |||||||||||||| || || |||||||| || || ||||| || || |||||||| || | ||||||| |
|
|
| T |
23597105 |
caaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgt |
23597006 |
T |
|
| Q |
830 |
tggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctcca |
929 |
Q |
| |
|
|| ||||| ||||| || || ||||| ||||| || |||||||||| ||| || ||||| |||||||||||||| || ||||| |||||||| ||||||| |
|
|
| T |
23597005 |
tgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctcca |
23596906 |
T |
|
| Q |
930 |
tacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttcaatggt |
1029 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| | || || ||||||| | ||| |||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
23596905 |
tacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggt |
23596806 |
T |
|
| Q |
1030 |
ggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccact |
1110 |
Q |
| |
|
||| || |||||||| || || || ||||| || || || |||||||| |||||||| |||||||| ||||| || ||||| |
|
|
| T |
23596805 |
ggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccact |
23596725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 195 - 1100
Target Start/End: Original strand, 54395536 - 54396441
Alignment:
| Q |
195 |
caatcttgtcatccttaattgtgttcctcatgttgtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggactt |
294 |
Q |
| |
|
||||||| |||||||||||||| |||||||| || || |||||||| || | || |||||| ||||| || |||||||| ||||||||||| | ||| |
|
|
| T |
54395536 |
caatcttctcatccttaattgtattcctcatattataagcataattctcaattgaattcttcgcctccactttcttcttcacctcttcatcctctgcctt |
54395635 |
T |
|
| Q |
295 |
gtacttctctgcctcttgaaccatcttctcaatatcttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagttttg |
394 |
Q |
| |
|
||||||||||| |||| ||||||||||| || |||||||| | || ||||| ||||| ||||| || ||||| |||||| ||| | ||||| |
|
|
| T |
54395636 |
atacttctctgcatctttcaccatcttctctatctcttccttgctcaacctccccttatcattcgtgatcgttatcttgttcttcactccagctgtttta |
54395735 |
T |
|
| Q |
395 |
tcttcagcagagacattcaagataccattggcatcaatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaa |
494 |
Q |
| |
|
||||||||||| || ||||| |||||||| ||||||||||| || || ||| ||||||| || ||||| || |||||||||||||| || | ||||||| |
|
|
| T |
54395736 |
tcttcagcagaaacgttcaatataccattcgcatcaatgtcgaaacaaacattgatctgtggtacacctcttggagcaggaggaataccagtgagttcaa |
54395835 |
T |
|
| Q |
495 |
acttgcccaacaa-attgttatctcttgtccttgtcctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaactt |
593 |
Q |
| |
|
| || ||||| || ||| ||||| |||| |||| | || |||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||||| | |
|
|
| T |
54395836 |
attt-cccaagaagattattatcctttgttcttgcacgttcaccttcaaaaacttgaatcaaaacaccaggttggttatctgagtaagttgagaaaatct |
54395934 |
T |
|
| Q |
594 |
gttctttctttgttggaatagtggtattccttggaat-aaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaa |
692 |
Q |
| |
|
| || ||||| || ||||| || || ||||||||||| || | | |||||||||||||||||||| ||||| || | | ||||| || ||||| | | |
|
|
| T |
54395935 |
gctccttcttcgtaggaatcgtcgtgttccttggaatcaaagtc-gtcataacaccaccagcagtttccaaccccaaactaagaggagtaacatcaagca |
54396033 |
T |
|
| Q |
693 |
ggagaagatcctgaaccttctcgttgccttcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgca |
792 |
Q |
| |
|
|||||||| |||||||| || | |||||||| |||||||| || || |||||||| |||||||| |||||||| ||||| || ||||| |||||||| |
|
|
| T |
54396034 |
acagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgca |
54396133 |
T |
|
| Q |
793 |
tagctcctttccgtttaagaaatcctgaagaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtcc |
892 |
Q |
| |
|
||||| || || || ||||||||||| | ||| ||||| || || ||||| || |||||||||||||| || ||||| |||||||| |||| || |
|
|
| T |
54396134 |
aagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatgaacatgactcttatca |
54396233 |
T |
|
| Q |
893 |
atcttagcatctcttaaacatttctcaactggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtaga |
992 |
Q |
| |
|
||||||||||| |||| ||| |||||||| || ||||||||||||||||| | |||||| || | ||||||||||| || | |||||| | | |||| |
|
|
| T |
54396234 |
atcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcccttgtaatagttgcataga |
54396333 |
T |
|
| Q |
993 |
agtcaattccctcaaacagagaatcaatttcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaag |
1092 |
Q |
| |
|
| |||||||| ||||||| |||||||||||| || || ||||| ||||| ||||| || |||||||| || || || ||||| || || || ||||| | |
|
|
| T |
54396334 |
aatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaa |
54396433 |
T |
|
| Q |
1093 |
agctcttg |
1100 |
Q |
| |
|
|||||||| |
|
|
| T |
54396434 |
agctcttg |
54396441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 726 - 774
Target Start/End: Complemental strand, 9336415 - 9336367
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatc |
774 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
9336415 |
cactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatc |
9336367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 220; Significance: 1e-120; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 12 - 589
Target Start/End: Complemental strand, 17706911 - 17706336
Alignment:
| Q |
12 |
ccatgtcaggacctgcaccaccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgc |
111 |
Q |
| |
|
||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17706911 |
ccatgccaagaccagcaccaccttggtacatcttggcaatgatagggttgcagacaccttctggttccttcatcttgtcctcaaactcatctgcctctgc |
17706812 |
T |
|
| Q |
112 |
aagctggttagcatctagccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatcctta |
211 |
Q |
| |
|
|||||| || || ||||||||| |||||| ||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||| ||||||||| |
|
|
| T |
17706811 |
aagctgattggcgtctagccaccggatagtagcctcaatggtgtcctcaattttctt---gtctttggaatcaagctttcctgcaatcttttcatcctta |
17706715 |
T |
|
| Q |
212 |
attgtgttcctcatgttgtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctctt |
311 |
Q |
| |
|
|| |||| |||| |||||||| | ||||||| |||||||||||||| |||| ||| ||| |||| | | || || ||||||||||| |||||| |
|
|
| T |
17706714 |
atggtgtccctcgtgttgtat----agttttccatagcattcttggcctcaacctcctt---atgctcttaaacttctgagttgtacttctccgcctctc |
17706622 |
T |
|
| Q |
312 |
gaaccatcttctcaatatcttccttagaaagtctacccttgtcattggtgatggtaatcttattcttctgtccggtagtttt--------gtcttcagca |
403 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| |||||||||||||||||||| || || || ||| | |||||||| ||||||||| |
|
|
| T |
17706621 |
gaactatcttctcaatgacttcctttgaaagtcttcccttgtcattggtgatggtgattttgatcaactggcaagtagtttttgtcttcactcttcagca |
17706522 |
T |
|
| Q |
404 |
gagacattcaagataccattggcatcaatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctgaaagttcaaacttgccca |
503 |
Q |
| |
|
|||||||||| |||||||| | ||||||||||||||| ||| ||||||| |||||||||| |||||||||||| ||||| ||||||| ||| || |||| |
|
|
| T |
17706521 |
aagacattcaatataccattaggatcaatgtcaaagcatacaatgatctgtggaacaccccaaggagcaggagggatgccggaaagttgaaattttccca |
17706422 |
T |
|
| Q |
504 |
acaaattgttatctcttgtccttgtcctctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaa |
589 |
Q |
| |
|
|||||||||||||| | | ||||| | ||||||||||||||||| |||||||| | ||| ||||||||| || ||||| |||||| |
|
|
| T |
17706421 |
acaaattgttatctttaattcttgttccctctccttcaaagactttgatcaacaaatcagactggttgtcagaataggttgagaaa |
17706336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 635 - 1008
Target Start/End: Complemental strand, 17706327 - 17705955
Alignment:
| Q |
635 |
acagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcgttgccttcaccactcaaaa |
734 |
Q |
| |
|
|||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
17706327 |
acagtcatcagaccaccaacagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctaattgtactcaccactcaagt |
17706228 |
T |
|
| Q |
735 |
ttgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgttggac |
834 |
Q |
| |
|
|||||| ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| | | ||| ||| || |
|
|
| T |
17706227 |
atgcagcacaaactgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaac |
17706129 |
T |
|
| Q |
835 |
cttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctccatacat |
934 |
Q |
| |
|
||| ||||||||||| || || || || |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
17706128 |
ctttggaattctggtagaacctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacat |
17706029 |
T |
|
| Q |
935 |
ttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaa |
1008 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||| |||||||||||||| |
|
|
| T |
17706028 |
ttcctaaagagatccatgttgagctcttcaaatctggcacgagaaatggaggagcagaaatcaattccctcaaa |
17705955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 722 - 1117
Target Start/End: Complemental strand, 17622473 - 17622078
Alignment:
| Q |
722 |
tcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaa |
821 |
Q |
| |
|
||||||||||| |||||||| | ||| || |||||| | ||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| | |
|
|
| T |
17622473 |
tcaccactcaagattgcagcgtaaactgcagcaccacacgcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgca |
17622374 |
T |
|
| Q |
822 |
gaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
| |||||| ||||| ||||||||||| || || || || |||||||||||||| || ||| | ||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
17622373 |
ataattgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaac |
17622274 |
T |
|
| Q |
922 |
tggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatt |
1021 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| |||| ||||||||||| || ||| |||||||| |
|
|
| T |
17622273 |
ttgctccatacatttcctaaagagatccatgttgagcttttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatt |
17622174 |
T |
|
| Q |
1022 |
tcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
||||||||||| ||| ||||| | ||||| |||||||| ||| | || |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17622173 |
tcaatggtggtttggacagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtcc |
17622078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 722 - 1117
Target Start/End: Complemental strand, 17717215 - 17716820
Alignment:
| Q |
722 |
tcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaa |
821 |
Q |
| |
|
|||||| |||| ||||||| | ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| | |
|
|
| T |
17717215 |
tcaccattcaagattgcagtgtaaactgccgcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgca |
17717116 |
T |
|
| Q |
822 |
gaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
|||||||| ||||| ||||||||||| || || || || |||||||||||||| || ||| |||| |||| ||||| || |||||||||||||| |
|
|
| T |
17717115 |
atagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaac |
17717016 |
T |
|
| Q |
922 |
tggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatt |
1021 |
Q |
| |
|
| |||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||| |||||||| |
|
|
| T |
17717015 |
ttgctccatacattccctgaagagatccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatt |
17716916 |
T |
|
| Q |
1022 |
tcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
17716915 |
tcaatggtggtctgggcagtagatgatagagctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtcc |
17716820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 722 - 1117
Target Start/End: Complemental strand, 17667211 - 17666816
Alignment:
| Q |
722 |
tcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaa |
821 |
Q |
| |
|
||||||||||| |||||||| | || || |||||||| |||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||| | |
|
|
| T |
17667211 |
tcaccactcaagattgcagcgtaaaatgcagcaccatacacaacagcctcgttgggattaatgctattgcatagctcctttccgttaaagaaatcctgca |
17667112 |
T |
|
| Q |
822 |
gaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
| |||||| ||||| ||||||||||| || || || || |||||||||||||| || ||| | |||||||||||||||| ||| |||||||||||||| |
|
|
| T |
17667111 |
ataattgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctcaaacatttctcaac |
17667012 |
T |
|
| Q |
922 |
tggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatt |
1021 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||| ||||||||||| || ||| | |||||| |
|
|
| T |
17667011 |
ttgctccatacatttcctaaagagatccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaatagacattcaatt |
17666912 |
T |
|
| Q |
1022 |
tcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | |||||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17666911 |
tcaatggtggtctgagcagtagatgatagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtcc |
17666816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 752 - 1117
Target Start/End: Complemental strand, 17648539 - 17648174
Alignment:
| Q |
752 |
gcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgttggaccttaggaattctggttg |
851 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| | |||||||| ||||| |||||||| || | |
|
|
| T |
17648539 |
gcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattcttgtag |
17648440 |
T |
|
| Q |
852 |
atccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactggctccatacatttcctaaagagatccat |
951 |
Q |
| |
|
| || || || ||||||| |||||| || ||||| ||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17648439 |
aaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagagatccat |
17648340 |
T |
|
| Q |
952 |
gttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttcaatggtggtctgggcagtagaagatagg |
1051 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||| |||| |||| ||||||||||| || ||| ||||||||||||||||||| ||| |||| | ||||| |
|
|
| T |
17648339 |
gttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaatgataga |
17648240 |
T |
|
| Q |
1052 |
gttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
|||||||| ||| | || |||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
17648239 |
gttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtcc |
17648174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 725 - 1117
Target Start/End: Complemental strand, 17718476 - 17718084
Alignment:
| Q |
725 |
ccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaa |
824 |
Q |
| |
|
|||||||| |||||||| | ||| || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||| | |
|
|
| T |
17718476 |
ccactcaagattgcagcgtaaactgcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccata |
17718377 |
T |
|
| Q |
825 |
gttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaactgg |
924 |
Q |
| |
|
||||||| ||||| |||||| |||| || || || || |||||||||||||| || ||| |||| |||| |||| ||| ||||||||||||||| | |
|
|
| T |
17718376 |
gttgttgaacctttggaattttggtagaacctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttg |
17718277 |
T |
|
| Q |
925 |
ctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatttca |
1024 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
17718276 |
ctccatacattccctgaagagatccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttca |
17718177 |
T |
|
| Q |
1025 |
atggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
||||||||||||| |||||| ||||| | |||||||||||| || ||||||||||||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
17718176 |
atggtggtctgggaagtagatgatagagctctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtcc |
17718084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 12 - 369
Target Start/End: Complemental strand, 17649544 - 17649198
Alignment:
| Q |
12 |
ccatgtcaggacctgcaccaccttggtacatcttggcaatgatagggttgcagacactttccaattccttcatcttgtcctcaaactcatctgcctctgc |
111 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||| | | |
|
|
| T |
17649544 |
ccatgtcaagacctgcaccaccttggtacatcttggcaatgatagggttgccgacacctcgcggttccttcatcttatcctcaaactcatctgcctattc |
17649445 |
T |
|
| Q |
112 |
aagctggttagcatctagccactggatagcagcctcaatggtgtcctcaatcttcttcttgtcatcggaatcaagctttcctgcaatcttgtcatcctta |
211 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||| ||||| ||| |
|
|
| T |
17649444 |
aagctggtt-gggtctagccactggatagcagcctcaatggtgtcctcaa---tcttcttgtctttggaatcaagctttcatgcaatcttttcatcatta |
17649349 |
T |
|
| Q |
212 |
attgtgttcctcatgttgtatgcataattttccaatgcattcttggcctcgaccttcttcttatgttcttcatcctcggacttgtacttctctgcctctt |
311 |
Q |
| |
|
|| |||||||||||||||| ||| |||||||||||||||||| ||| || || |||||| |||||||| || ||||||||||||||||||||| |
|
|
| T |
17649348 |
atggtgttcctcatgttgt----atagttttccaatgcattcttgtccttaac---ctacttatgctcttcatcttccgacttgtacttctctgcctctc |
17649256 |
T |
|
| Q |
312 |
gaaccatcttctcaatatcttccttagaaagtctacccttgtcattggtgatggtaat |
369 |
Q |
| |
|
|||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
17649255 |
gaaccatcttctcaatgttttcctttgaaagtctacccttgtcattggtgatggtaat |
17649198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 722 - 1117
Target Start/End: Complemental strand, 17704583 - 17704188
Alignment:
| Q |
722 |
tcaccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaa |
821 |
Q |
| |
|
||||||||||| |||||||| | || || ||||||||||||||| |||| || ||||||||||| | |||||||| ||||| ||| ||||||||||| | |
|
|
| T |
17704583 |
tcaccactcaagattgcagcgtaaaatgcagcaccatatgcaacaacctcgtcgggattaatgctatcgcatagcttctttctgttaaagaaatcctgca |
17704484 |
T |
|
| Q |
822 |
gaagttgttggaccttaggaattctggttgatccaccaactaggacaacatcatgaacgcttttcttgtccatcttagcatctcttaaacatttctcaac |
921 |
Q |
| |
|
|||||||| ||||| ||||||||||| || || || || |||||||||||||| || ||| | ||||||||| ||||| ||| ||| |||||| || |
|
|
| T |
17704483 |
atagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctcaaaagtttctcgac |
17704384 |
T |
|
| Q |
922 |
tggctccatacatttcctaaagagatccatgttgagctcttcaaatctggcacgtgtaatgggggagtagaagtcaattccctcaaacagagaatcaatt |
1021 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || | |||| || ||||||| || | | || ||||| |
|
|
| T |
17704383 |
agtctccatacatttcataaagagatccatgttgagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaataaacaaacaatt |
17704284 |
T |
|
| Q |
1022 |
tcaatggtggtctgggcagtagaagatagggttctcttcgccctttcgcaagcagtcctcaacctcctaagagctcttgggttgccactgatgtcc |
1117 |
Q |
| |
|
||||||||||| ||| |||| | ||||| |||||||| ||| | || |||||||||||||||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
17704283 |
tcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgccactgatgtcc |
17704188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 531 - 847
Target Start/End: Complemental strand, 17722081 - 17721761
Alignment:
| Q |
531 |
tctctccttcaaagacttggatcaacacaccaggctggttgtcggagtaggtagagaaaacttgttctttctttgttggaatagtggtattccttggaat |
630 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| || ||||| ||| || |||||| |||||||||||||| ||||||| |||||| || |
|
|
| T |
17722081 |
tctctccttcaaagacttggataaacacaccaggctggttatcaatataggttgagcgaatttgttccttctttgttggaatggtggtatcccttgggat |
17721982 |
T |
|
| Q |
631 |
aaggacagtcataacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaagga-----gaagatcctgaaccttctcgttgccttcac |
725 |
Q |
| |
|
|| ||| |||| ||||||||||||||||||| |||||||||| | | ||||||||||||||||| || ||||||||||||||| ||||| |||| |
|
|
| T |
17721981 |
tagaacaatcatcacaccaccagcagtctccagaccaagagatggcgaggtgacatccaaaaggaaaggagatgatcctgaaccttcta-ttgccctcac |
17721883 |
T |
|
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaag |
825 |
Q |
| |
|
||||| | |||| |||||||||||| | |||||||||||| |||| || | ||||||||| |||||||||||||||| ||| ||||||||||| | || |
|
|
| T |
17721882 |
cactcgagattgtagcctgaacagcagtgccatatgcaacaacctcgtcggaattaatgctattgcatagctcctttctgttaaagaaatcctgtaatag |
17721783 |
T |
|
| Q |
826 |
ttgttggaccttaggaattctg |
847 |
Q |
| |
|
|||||| | ||| ||||||||| |
|
|
| T |
17721782 |
ttgttgaaactttggaattctg |
17721761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 386 - 548
Target Start/End: Complemental strand, 17648792 - 17648630
Alignment:
| Q |
386 |
gtagttttgtcttcagcagagacattcaagataccattggcatcaatgtcaaagcacacagtgatctggggaacacccctaggagcaggaggaatgcctg |
485 |
Q |
| |
|
|||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||||| | |
|
|
| T |
17648792 |
gtagttttgtcttcagcaaagacatccaatataccattagcatcaatgtcaaagcatacactgatctgtggaacacctctaggagcaggagggatgccgg |
17648693 |
T |
|
| Q |
486 |
aaagttcaaacttgcccaacaaattgttatctcttgtccttgtcctctctccttcaaagactt |
548 |
Q |
| |
|
|||||| ||| || |||||||||||||||||| | | ||||| | ||||||||||||||||| |
|
|
| T |
17648692 |
aaagttgaaattttcccaacaaattgttatctttaattcttgttccctctccttcaaagactt |
17648630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 725 - 792
Target Start/End: Original strand, 7541869 - 7541936
Alignment:
| Q |
725 |
ccactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgca |
792 |
Q |
| |
|
|||||||| | ||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
7541869 |
ccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
7541936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 727 - 774
Target Start/End: Original strand, 43625057 - 43625104
Alignment:
| Q |
727 |
actcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatc |
774 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
43625057 |
actcaaaatagcagcctggacagctgcaccataagcaacagcctcatc |
43625104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 737 - 807
Target Start/End: Original strand, 11999063 - 11999133
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtt |
807 |
Q |
| |
|
||||| |||||||| || ||||| || ||||||||||| || |||||||||||||| | |||||| ||||| |
|
|
| T |
11999063 |
gcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgtt |
11999133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 737 - 875
Target Start/End: Complemental strand, 12245919 - 12245781
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctttccgtttaagaaatcctgaagaagttgttggacct |
836 |
Q |
| |
|
||||| |||||||| || ||||| ||||||||||| || || |||||||||||||| | ||||| ||||| || || ||||| | || |||||||| | |
|
|
| T |
12245919 |
gcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactt |
12245820 |
T |
|
| Q |
837 |
taggaattctggttgatccaccaactaggacaacatcat |
875 |
Q |
| |
|
| ||||| || | ||||||||||| || |||| ||||| |
|
|
| T |
12245819 |
tgggaatcctagaagatccaccaacaagtacaaaatcat |
12245781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 17722122 - 17722080
Alignment:
| Q |
243 |
ccaatgcattcttggcctcgaccttcttcttatgttcttcatc |
285 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
17722122 |
ccaatgcattcttggcctcaacctccttcttatgctcttcatc |
17722080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 737 - 801
Target Start/End: Original strand, 12528159 - 12528223
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctt |
801 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || || ||||||||| ||| |||||| |
|
|
| T |
12528159 |
gcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactcctt |
12528223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 737 - 789
Target Start/End: Original strand, 28219573 - 28219625
Alignment:
| Q |
737 |
gcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctctt |
789 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28219573 |
gcagcctgcacagctgcaccataagcaacagcctcatcagggttaatgctctt |
28219625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 726 - 801
Target Start/End: Complemental strand, 52549470 - 52549395
Alignment:
| Q |
726 |
cactcaaaattgcagcctgaacagcggcaccatatgcaacagcctcatccggattaatgctcttgcatagctcctt |
801 |
Q |
| |
|
||||||| | ||||||||||||||| || ||||| || ||| ||||||| |||||||||| |||||| | |||||| |
|
|
| T |
52549470 |
cactcaacaatgcagcctgaacagctgcgccataagctacaacctcatcaggattaatgcccttgcacaactcctt |
52549395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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