View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6900_low_38 (Length: 322)

Name: NF6900_low_38
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6900_low_38
NF6900_low_38
[»] chr2 (45 HSPs)
chr2 (2-211)||(10394259-10394454)
chr2 (100-171)||(6075497-6075568)
chr2 (95-150)||(28108433-28108488)
chr2 (99-150)||(30757626-30757677)
chr2 (99-150)||(41436077-41436128)
chr2 (254-312)||(10393440-10393498)
chr2 (2-131)||(40964951-40965082)
chr2 (159-211)||(43950424-43950476)
chr2 (100-148)||(44424323-44424371)
chr2 (2-150)||(3100297-3100449)
chr2 (156-211)||(43077702-43077757)
chr2 (97-147)||(8031737-8031787)
chr2 (2-154)||(28572109-28572261)
chr2 (157-211)||(33755334-33755388)
chr2 (100-154)||(43427140-43427194)
chr2 (102-147)||(435139-435184)
chr2 (95-148)||(33880152-33880205)
chr2 (95-147)||(7648927-7648979)
chr2 (100-148)||(18181273-18181321)
chr2 (99-147)||(23684957-23685005)
chr2 (2-57)||(24451680-24451736)
chr2 (100-148)||(26273758-26273806)
chr2 (99-147)||(28301432-28301480)
chr2 (95-147)||(28925909-28925961)
chr2 (95-143)||(33751455-33751503)
chr2 (159-211)||(41436158-41436209)
chr2 (100-147)||(3199897-3199944)
chr2 (100-147)||(8550703-8550750)
chr2 (156-211)||(24775784-24775839)
chr2 (100-150)||(4794572-4794622)
chr2 (97-147)||(13375251-13375301)
chr2 (157-211)||(44534459-44534513)
chr2 (2-31)||(28108562-28108591)
chr2 (2-31)||(30757747-30757776)
chr2 (2-31)||(31348409-31348438)
chr2 (100-145)||(33275761-33275806)
chr2 (99-148)||(38282483-38282532)
chr2 (100-148)||(2756673-2756721)
chr2 (100-148)||(5425856-5425904)
chr2 (100-148)||(9472421-9472469)
chr2 (100-148)||(31348510-31348558)
chr2 (95-147)||(37247945-37247997)
chr2 (159-211)||(40965093-40965145)
chr2 (99-147)||(43077787-43077835)
chr2 (100-132)||(44024717-44024749)
[»] chr7 (43 HSPs)
chr7 (1-211)||(45890834-45891046)
chr7 (95-154)||(33584557-33584616)
chr7 (96-150)||(29434638-29434692)
chr7 (95-150)||(29257541-29257596)
chr7 (99-154)||(31581497-31581552)
chr7 (2-150)||(2846734-2846885)
chr7 (95-147)||(34963872-34963924)
chr7 (99-154)||(30463014-30463069)
chr7 (156-211)||(37490594-37490649)
chr7 (157-211)||(44604454-44604508)
chr7 (2-67)||(48981277-48981342)
chr7 (97-150)||(48981652-48981705)
chr7 (154-198)||(29434569-29434613)
chr7 (100-148)||(37264312-37264360)
chr7 (100-148)||(37496457-37496505)
chr7 (159-211)||(40038085-40038137)
chr7 (95-131)||(47453998-47454034)
chr7 (2-57)||(7426033-7426086)
chr7 (99-154)||(23703914-23703969)
chr7 (100-147)||(25778743-25778790)
chr7 (101-148)||(25940809-25940856)
chr7 (101-148)||(28333171-28333218)
chr7 (156-211)||(30463092-30463147)
chr7 (95-150)||(36117655-36117710)
chr7 (99-150)||(44604535-44604586)
chr7 (95-150)||(46288489-46288544)
chr7 (157-211)||(2846652-2846706)
chr7 (101-147)||(27234503-27234549)
chr7 (156-198)||(29645223-29645265)
chr7 (97-143)||(40038176-40038222)
chr7 (156-209)||(18235266-18235319)
chr7 (99-148)||(37157168-37157217)
chr7 (97-150)||(49100560-49100613)
chr7 (99-147)||(2842113-2842161)
chr7 (99-147)||(5724768-5724816)
chr7 (156-211)||(7425853-7425909)
chr7 (95-150)||(11616555-11616611)
chr7 (100-148)||(14648979-14649027)
chr7 (100-148)||(32775982-32776030)
chr7 (2-57)||(33584460-33584516)
chr7 (100-148)||(34064214-34064262)
chr7 (98-154)||(38181928-38181984)
chr7 (100-148)||(38589733-38589781)
[»] chr3 (40 HSPs)
chr3 (2-211)||(39365013-39365226)
chr3 (95-147)||(54493902-54493954)
chr3 (156-211)||(54122200-54122255)
chr3 (2-55)||(12744711-12744764)
chr3 (99-157)||(15280603-15280661)
chr3 (95-147)||(32827365-32827417)
chr3 (99-147)||(41031570-41031618)
chr3 (97-148)||(1334841-1334892)
chr3 (95-150)||(5245406-5245461)
chr3 (156-211)||(9017877-9017932)
chr3 (95-150)||(33994651-33994706)
chr3 (100-147)||(37041934-37041981)
chr3 (156-211)||(55415415-55415470)
chr3 (101-147)||(26832071-26832117)
chr3 (100-150)||(52325176-52325226)
chr3 (95-148)||(32023161-32023214)
chr3 (99-144)||(47684765-47684810)
chr3 (99-147)||(26134764-26134812)
chr3 (99-147)||(38600867-38600915)
chr3 (100-148)||(42547166-42547214)
chr3 (99-147)||(45392088-45392136)
chr3 (156-211)||(10855070-10855125)
chr3 (156-211)||(11251103-11251158)
chr3 (99-154)||(15082001-15082055)
chr3 (156-211)||(21296479-21296534)
chr3 (100-150)||(30261559-30261610)
chr3 (156-211)||(33994733-33994788)
chr3 (100-147)||(34081116-34081163)
chr3 (156-211)||(39866529-39866584)
chr3 (164-211)||(54845492-54845539)
chr3 (5-67)||(21585554-21585616)
chr3 (109-147)||(39825833-39825871)
chr3 (2-31)||(1922993-1923022)
chr3 (99-148)||(9218143-9218192)
chr3 (98-147)||(46786042-46786091)
chr3 (95-148)||(54021518-54021571)
chr3 (100-148)||(1923089-1923137)
chr3 (100-148)||(39329810-39329858)
chr3 (100-148)||(48409583-48409631)
chr3 (5-57)||(48744126-48744178)
[»] chr4 (54 HSPs)
chr4 (101-211)||(2906684-2906794)
chr4 (99-154)||(32559161-32559216)
chr4 (95-154)||(39258326-39258385)
chr4 (95-150)||(42024259-42024314)
chr4 (99-148)||(29644353-29644402)
chr4 (95-150)||(38976985-38977040)
chr4 (95-150)||(41710202-41710257)
chr4 (96-150)||(39979775-39979829)
chr4 (101-150)||(4360466-4360515)
chr4 (97-150)||(49306583-49306636)
chr4 (100-148)||(40021008-40021056)
chr4 (154-209)||(4357641-4357696)
chr4 (99-154)||(26799270-26799325)
chr4 (156-211)||(35909549-35909604)
chr4 (100-147)||(49448840-49448887)
chr4 (95-150)||(49812223-49812278)
chr4 (160-211)||(54729460-54729511)
chr4 (101-147)||(18509446-18509492)
chr4 (6-67)||(33047400-33047461)
chr4 (100-157)||(43335074-43335131)
chr4 (96-148)||(3686006-3686058)
chr4 (100-148)||(4354447-4354495)
chr4 (99-147)||(4357566-4357614)
chr4 (95-147)||(35998178-35998230)
chr4 (100-148)||(41436480-41436528)
chr4 (99-147)||(42185857-42185905)
chr4 (35-147)||(8294962-8295075)
chr4 (154-209)||(17237117-17237172)
chr4 (96-143)||(22496742-22496789)
chr4 (156-211)||(27977223-27977278)
chr4 (1-56)||(42544107-42544161)
chr4 (100-147)||(47277743-47277790)
chr4 (100-147)||(47846898-47846945)
chr4 (95-150)||(54729542-54729596)
chr4 (156-210)||(4360385-4360439)
chr4 (100-150)||(22872446-22872496)
chr4 (97-147)||(37309694-37309744)
chr4 (156-202)||(40020933-40020979)
chr4 (2-31)||(4360587-4360616)
chr4 (2-67)||(18849903-18849967)
chr4 (8-56)||(29656469-29656520)
chr4 (99-148)||(39052961-39053010)
chr4 (97-150)||(42544205-42544258)
chr4 (100-148)||(9052110-9052158)
chr4 (100-148)||(10099785-10099833)
chr4 (103-147)||(21954491-21954535)
chr4 (100-148)||(22020570-22020618)
chr4 (100-148)||(25250653-25250701)
chr4 (100-148)||(29550787-29550835)
chr4 (100-148)||(38319910-38319958)
chr4 (98-150)||(39976448-39976500)
chr4 (98-150)||(44020820-44020872)
chr4 (99-131)||(47787924-47787956)
chr4 (115-155)||(50714596-50714636)
[»] chr8 (42 HSPs)
chr8 (95-150)||(29615792-29615847)
chr8 (95-150)||(44790480-44790535)
chr8 (2-150)||(5391946-5392098)
chr8 (97-150)||(32967335-32967388)
chr8 (98-150)||(45425482-45425534)
chr8 (95-150)||(38252496-38252551)
chr8 (100-154)||(27987657-27987711)
chr8 (100-154)||(28044959-28045013)
chr8 (100-148)||(2195467-2195515)
chr8 (100-148)||(7258427-7258475)
chr8 (95-150)||(12653681-12653736)
chr8 (156-211)||(29615874-29615929)
chr8 (2-57)||(38252592-38252647)
chr8 (96-150)||(5962531-5962585)
chr8 (100-150)||(42412441-42412491)
chr8 (2-56)||(44790578-44790631)
chr8 (6-67)||(138936-138996)
chr8 (97-154)||(33746273-33746330)
chr8 (100-148)||(27868385-27868433)
chr8 (100-148)||(33826230-33826278)
chr8 (156-211)||(139098-139153)
chr8 (99-150)||(2349348-2349399)
chr8 (103-150)||(10728980-10729027)
chr8 (101-148)||(11637140-11637187)
chr8 (99-150)||(22490389-22490440)
chr8 (95-150)||(28802761-28802816)
chr8 (99-150)||(39171541-39171592)
chr8 (5-55)||(21587177-21587227)
chr8 (159-209)||(45197690-45197739)
chr8 (154-195)||(138691-138732)
chr8 (2-67)||(2119614-2119679)
chr8 (105-150)||(5423222-5423267)
chr8 (97-150)||(34287137-34287190)
chr8 (100-148)||(8418362-8418410)
chr8 (111-147)||(9014610-9014646)
chr8 (100-148)||(14689959-14690007)
chr8 (100-148)||(14748766-14748814)
chr8 (114-150)||(21587290-21587326)
chr8 (100-148)||(28791307-28791355)
chr8 (156-208)||(31410587-31410639)
chr8 (159-211)||(32241400-32241452)
chr8 (96-148)||(44615425-44615477)
[»] chr1 (40 HSPs)
chr1 (95-150)||(28839333-28839388)
chr1 (95-154)||(8327711-8327770)
chr1 (95-150)||(11324242-11324297)
chr1 (95-150)||(11482263-11482318)
chr1 (99-154)||(38664399-38664454)
chr1 (95-150)||(51749242-51749297)
chr1 (157-211)||(8327794-8327848)
chr1 (99-144)||(42309430-42309475)
chr1 (4-150)||(3555614-3555762)
chr1 (95-147)||(26755970-26756022)
chr1 (95-147)||(27698806-27698858)
chr1 (100-148)||(29225752-29225800)
chr1 (159-211)||(32587844-32587896)
chr1 (156-211)||(42926210-42926265)
chr1 (99-150)||(45889307-45889358)
chr1 (95-150)||(46536334-46536389)
chr1 (7-150)||(8773141-8773291)
chr1 (157-211)||(28839416-28839470)
chr1 (154-211)||(36467172-36467229)
chr1 (97-150)||(46496014-46496067)
chr1 (97-150)||(49494222-49494275)
chr1 (95-131)||(19532997-19533033)
chr1 (100-148)||(25842598-25842646)
chr1 (100-148)||(35622840-35622888)
chr1 (100-148)||(36232850-36232898)
chr1 (159-211)||(46273239-46273291)
chr1 (99-147)||(50267500-50267548)
chr1 (96-147)||(36467257-36467308)
chr1 (99-150)||(48242649-48242700)
chr1 (156-211)||(52830391-52830446)
chr1 (100-154)||(10587636-10587690)
chr1 (157-211)||(51749160-51749214)
chr1 (160-209)||(6787327-6787376)
chr1 (99-148)||(17724775-17724824)
chr1 (109-150)||(27831854-27831895)
chr1 (98-147)||(28277100-28277149)
chr1 (2-31)||(29225588-29225617)
chr1 (95-147)||(7785336-7785388)
chr1 (96-140)||(7787672-7787716)
chr1 (100-148)||(29756203-29756251)
[»] chr5 (40 HSPs)
chr5 (1-67)||(41686636-41686702)
chr5 (2-150)||(42575697-42575848)
chr5 (96-150)||(11099536-11099590)
chr5 (157-202)||(41594833-41594878)
chr5 (156-211)||(11099454-11099509)
chr5 (95-150)||(17243013-17243068)
chr5 (95-150)||(20189886-20189941)
chr5 (99-150)||(35334585-35334636)
chr5 (97-154)||(858331-858388)
chr5 (159-211)||(28057807-28057859)
chr5 (95-150)||(4412377-4412432)
chr5 (6-57)||(5357972-5358023)
chr5 (100-147)||(6173042-6173089)
chr5 (2-147)||(6610733-6610883)
chr5 (95-150)||(13135747-13135802)
chr5 (99-150)||(41184115-41184166)
chr5 (97-147)||(7613703-7613753)
chr5 (95-144)||(13717004-13717053)
chr5 (159-204)||(24231089-24231134)
chr5 (107-148)||(25344799-25344840)
chr5 (156-209)||(35646068-35646121)
chr5 (100-148)||(72166-72214)
chr5 (100-148)||(39212612-39212660)
chr5 (95-150)||(3725180-3725235)
chr5 (161-208)||(5816814-5816861)
chr5 (100-147)||(6629455-6629502)
chr5 (100-147)||(13422414-13422461)
chr5 (2-57)||(19817114-19817169)
chr5 (95-150)||(33988194-33988249)
chr5 (156-211)||(33988276-33988331)
chr5 (2-68)||(7276282-7276347)
chr5 (100-150)||(39183686-39183736)
chr5 (100-146)||(41268337-41268383)
chr5 (97-147)||(42211329-42211379)
chr5 (100-154)||(42479541-42479595)
chr5 (101-150)||(6735416-6735465)
chr5 (97-154)||(8692873-8692930)
chr5 (109-150)||(42871046-42871087)
chr5 (109-145)||(86981-87017)
chr5 (98-150)||(33012351-33012403)
[»] chr6 (16 HSPs)
chr6 (2-154)||(33109271-33109426)
chr6 (95-150)||(15081417-15081472)
chr6 (95-150)||(30064007-30064062)
chr6 (105-150)||(117083-117128)
chr6 (100-148)||(33018004-33018052)
chr6 (100-148)||(34441890-34441938)
chr6 (100-147)||(2310349-2310396)
chr6 (95-150)||(7301138-7301193)
chr6 (156-211)||(31265855-31265910)
chr6 (156-209)||(2657977-2658030)
chr6 (100-148)||(4552908-4552956)
chr6 (159-211)||(7739494-7739546)
chr6 (5-57)||(15081324-15081376)
chr6 (100-148)||(15321285-15321333)
chr6 (100-148)||(15371923-15371971)
chr6 (2-38)||(33921642-33921678)
[»] scaffold0221 (1 HSPs)
scaffold0221 (97-150)||(8883-8936)
[»] scaffold0058 (1 HSPs)
scaffold0058 (99-150)||(14454-14505)
[»] scaffold0001 (1 HSPs)
scaffold0001 (95-150)||(394772-394827)
[»] scaffold0227 (1 HSPs)
scaffold0227 (163-211)||(8949-8997)
[»] scaffold0321 (1 HSPs)
scaffold0321 (95-138)||(9619-9662)
[»] scaffold0045 (1 HSPs)
scaffold0045 (99-150)||(26320-26371)
[»] scaffold0034 (3 HSPs)
scaffold0034 (95-150)||(98819-98874)
scaffold0034 (156-211)||(98901-98956)
scaffold0034 (7-67)||(97962-98022)
[»] scaffold0028 (1 HSPs)
scaffold0028 (99-150)||(26611-26662)
[»] scaffold0086 (1 HSPs)
scaffold0086 (99-148)||(5816-5865)
[»] scaffold0003 (1 HSPs)
scaffold0003 (156-197)||(352451-352492)
[»] scaffold0262 (1 HSPs)
scaffold0262 (100-148)||(12496-12544)


Alignment Details
Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 10394454 - 10394259
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattttcaatacaataataattacnnnnnnnctcccttt 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||          |||||||    
T  10394454 tccctccgtcccataataactgagccattttccaaaataaagtgtcccaaaataactgagtcattttcaatacaataataatt---ttttttttcccttt 10394358  T
Q  102 ataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctcatt 201  Q
    |||||||||||||||| |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10394357 ataactataattaatatt-----------tcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctcctt 10394269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 6075497 - 6075568
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaa 171  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| | ||| ||| ||||||||||||    
T  6075497 ttataactctaattaatactactttcatcactcccaatttaatatattctactttgcactaatacttaacaa 6075568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 28108488 - 28108433
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  28108488 tccctttataactctaattaatactactttcatcattctcaattcaatatattcca 28108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 30757677 - 30757626
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  30757677 tttataactctaattaatactactttcatcattcccaattcaatatattcca 30757626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 41436077 - 41436128
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  41436077 tttataactctaattaatactactttcatcattctcaattcaatatattcca 41436128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 10393498 - 10393440
Alignment:
Q  254 acataccacacacacgaattgttaaaaaacgttaggttatcatcggacaatctgatgtc 312  Q
    ||||||| ||| |||||||||||||||||||||||||||||||  |||||||| |||||    
T  10393498 acataccgcacgcacgaattgttaaaaaacgttaggttatcatgagacaatctaatgtc 10393440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40964951 - 40965082
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt-----tcaatacaataataattacnnnnnnnctc 96  Q
    |||||| ||||||||||||||||| |||||   ||||  || |||||||||||||| |||||||||     ||||||||||| |||||||        ||    
T  40964951 tccctcagtcccataataactgagtcatttgcaaaaaagaaatgtcccaaaataactgagttatttatttttcaatacaatattaattacttttt---tc 40965047  T
Q  97 cctttataactataattaatactactttcatcatt 131  Q
    ||||||||||| ||||||||| |||||||||||||    
T  40965048 cctttataactctaattaatattactttcatcatt 40965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 43950476 - 43950424
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||    
T  43950476 caatacttaacaaaaacatttaaaactatttttctctctctttcacttataca 43950424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 44424371 - 44424323
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  44424371 ttataactctaattaatactactttcatcattctcaattcaatatattc 44424323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 3100297 - 3100449
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaa-gtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnc 94  Q
    ||||||||||||| ||||||||||||||||   |||| ||| ||||| ||||||||| |||| ||||      ||||||||||| |||||||            
T  3100297 tccctccgtcccacaataactgagccatttgcaaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacttttt--- 3100393  T
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||| ||||| ||||||||||||||||||  | | ||||||||||||||||||    
T  3100394 tccctttgtaactctaattaatactactttcacaacttccaatttaatatattcca 3100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 43077757 - 43077702
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||| |||||||  |||||||||| |||||||||||||||||| ||||||||    
T  43077757 caccaatagttaacaagtacatttaaaactatttttctctctcattcatttataca 43077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 8031737 - 8031787
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||| |||||||||||||||| ||||||| ||||| ||||||||    
T  8031737 cctttataactttaattaatactacttttatcattcacaattcaatatatt 8031787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 28572109 - 28572261
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagtta------ttttcaatacaataataattacnnnnnnnct 95  Q
    ||||||||||||| |||||||||| |||||   || | |||||||||||||||||| |||| |      |||||||||||||| |||||||        |    
T  28572109 tccctccgtcccacaataactgagacatttgcaaataaaaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaattactt------t 28572202  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    | |||||||||| ||||||||||||||||||  | | |||||| |||||||| ||||||    
T  28572203 ctctttataactgtaattaatactactttcacaacttccaattcaatatatttcatttt 28572261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 33755334 - 33755388
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||    
T  33755334 accaatacttaacaataacacttaaaatcatttttctctctccttcatttataca 33755388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 43427194 - 43427140
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||||| |||||    
T  43427194 ttataacactaattaatactactttcatcactcccaattcaatatattctatttt 43427140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 435184 - 435139
Alignment:
Q  102 ataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  435184 ataactttaattaatactactttcatcattctcaattcaatatatt 435139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 33880152 - 33880205
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||||||| ||||||||| |||||||| || |||||||| |||||||||    
T  33880152 tccctttataactctaattaatattactttcaccactcccaattcaatatattc 33880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 7648979 - 7648927
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||| | |||||||||||| |||||||| |||||||| ||||||||    
T  7648979 tccctttataattctaattaatactattttcatcactcccaattcaatatatt 7648927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 18181321 - 18181273
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  18181321 ttataactctaattaatactactttcattattcccaattcaaaatattc 18181273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 23684957 - 23685005
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  23684957 tttataactctaattaatactactttcatcactctcaattcaatatatt 23685005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 24451680 - 24451736
Alignment:
Q  2 tccctccgtcccataataactgagccatttttca-aaataaagtgtcccaaaataac 57  Q
    |||||||||||||||||||||||||||||||  | ||| ||||| ||||||||||||    
T  24451680 tccctccgtcccataataactgagccattttcaataaaaaaagtatcccaaaataac 24451736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 26273758 - 26273806
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||| | ||||||||||||||||||||| |||||||| |||||||||    
T  26273758 ttataaatttaattaatactactttcatcactcccaattcaatatattc 26273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 28301432 - 28301480
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  28301432 tttataactctaattaatactactttcatcactctcaattcaatatatt 28301480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 28925961 - 28925909
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  28925961 tccctttataactctaattaatactgttttgatcattcccaattcaatatatt 28925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 33751455 - 33751503
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaata 143  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| ||||    
T  33751455 tccctttataactctaattaatactactttcatcactctcaattcaata 33751503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 41436158 - 41436209
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||| ||||||||| |||||||||| |||| ||||||||    
T  41436158 caatacttaacaaaaacacttaaaatta-ttttctctctaattcatttataca 41436209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 3199897 - 3199944
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| |||||||||||||||||| || |||||||| ||||||||    
T  3199897 ttataactctaattaatactactttcaccactcccaattcaatatatt 3199944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 8550750 - 8550703
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  8550750 ttataactataattaatactactttcatcactcttaattcaatatatt 8550703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 24775839 - 24775784
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||    
T  24775839 caccaatacttaacaagtgcacttaaaattatttttctctctccttcatttataca 24775784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 4794572 - 4794622
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||| ||||||||||||||||||||| |  ||||| |||||||||||    
T  4794572 ttataactctaattaatactactttcatcactttcaattcaatatattcca 4794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 13375301 - 13375251
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| ||||||||    
T  13375301 cctttataactctaattaatattattttcatcattctcaattcaatatatt 13375251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 44534513 - 44534459
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| |||||||||||| |||||| ||| || ||| ||||||||    
T  44534513 accaatacttaacaagaacatttaaaatcatttttttctgtccttcatttataca 44534459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 28108591 - 28108562
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  28108591 tccctccgtcccataataactgagccattt 28108562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 30757776 - 30757747
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  30757776 tccctccgtcccataataactgagccattt 30757747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 31348409 - 31348438
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  31348409 tccctccgtcccataataactgagccattt 31348438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 33275806 - 33275761
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatata 145  Q
    |||||| | ||||||||| |||||||||||||||||||| ||||||    
T  33275806 ttataattttaattaatattactttcatcattcccaattcaatata 33275761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 38282532 - 38282483
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||| | ||||||||| |||||||| || ||||||||||||||||||    
T  38282532 tttataattctaattaatattactttcaccactcccaatttaatatattc 38282483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 2756673 - 2756721
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  2756673 ttataactctaattaatactatttacatcacttccaatttaatatattc 2756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 5425856 - 5425904
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||| | ||| |||||||| ||||||||||||||||| |||||||||    
T  5425856 ttataaatctaactaatactaatttcatcattcccaattcaatatattc 5425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 9472421 - 9472469
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||||||||||||||||||||| || |  ||||| |||||||||    
T  9472421 ttataactataattaatactactttcaccactatcaattcaatatattc 9472469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 31348510 - 31348558
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| |||||| |||| |||||||||    
T  31348510 ttataacactaattaatactactttcaccattcctaattcaatatattc 31348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 37247997 - 37247945
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| ||||||||| |||||||||||  | ||||| ||||||||    
T  37247997 tccctttataactctaattaatattactttcatcacactcaattcaatatatt 37247945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 40965093 - 40965145
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||  || |||||| |||||||||||||| ||| ||||||||    
T  40965093 caatacttaacaaatgcacttaaaactatttttctctctccttcatttataca 40965145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 43077835 - 43077787
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||| |||||||||||||  ||||| ||||||||    
T  43077835 tttataactctaattaatattactttcatcattttcaattcaatatatt 43077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 44024717 - 44024749
Alignment:
Q  100 ttataactataattaatactactttcatcattc 132  Q
    ||||||||||||||||||||| |||||||||||    
T  44024717 ttataactataattaatactattttcatcattc 44024749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 45891046 - 45890834
Alignment:
Q  1 ttccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnc 94  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||| ||||||||| |||  ||||      ||||||||||||||||||             
T  45891046 ttccctccgtcctataataactgagtcattttttaaaataaagtgtcacaaaataactgagcaatttcacttttcaatacaataataattattttt---- 45890951  T
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctc 194  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||  | |||| ||||||||||||||||| |||||||||  |||||||||    
T  45890950 tccctttataactataattaatattactttcatcatttccaattcaatatattttactttcaaccaatacttaacaaaagcatttaaaaccatttttctc 45890851  T
Q  195 tctcattcttttataca 211  Q
    |||| ||||||||||||    
T  45890850 tctccttcttttataca 45890834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 33584557 - 33584616
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  33584557 tccctttataactataattaatactactttcatcactcccaattcaatatattccatttt 33584616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 29434692 - 29434638
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  29434692 ccctttataactctaattaatactactttcatcattcacaattcaatatattcca 29434638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 29257541 - 29257596
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  29257541 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 29257596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 31581552 - 31581497
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||    
T  31581552 tttataactctaattaatactactttcatcattttcaattcaatatattccatttt 31581497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 2846885 - 2846734
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnct 95  Q
    |||||||||||||||||||||||| ||||||  | || |||||||||||||||||  |||| ||||      ||||||||  | |||||||        |    
T  2846885 tccctccgtcccataataactgagtcattttcaataaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacatcattaattacttttt---t 2846789  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    || ||||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  2846788 ccttttataactctaattaatactactttcatcaattccaattcaatatattcca 2846734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 34963924 - 34963872
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  34963924 tccctttataactctaattaatattactttcatcattctcaattaaatatatt 34963872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 30463014 - 30463069
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| ||||||||| |||||||||||||  ||||| |||||||||||||||    
T  30463014 tttataactctaattaatattactttcatcattttcaattcaatatattccatttt 30463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 37490649 - 37490594
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||||||    
T  37490649 caccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttataca 37490594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 44604508 - 44604454
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||    
T  44604508 accaatacttaacaagaacacttaaaatcatttttctctctccttcatttataca 44604454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 48981277 - 48981342
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    |||||||||||||||||||  ||||| |||   ||||||||||||||||||||||| |||| ||||    
T  48981277 tccctccgtcccataataatcgagccgtttgcaaaaataaagtgtcccaaaataactgagtcattt 48981342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 48981652 - 48981705
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| | ||||||| |||||||| |||||| ||||||||||||||||||    
T  48981652 cctttataattctaattaacactacttttatcatttccaatttaatatattcca 48981705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 29434613 - 29434569
Alignment:
Q  154 tccaccaatacttaacaaaaacatttaaaattatttttctctctc 198  Q
    |||||||||||||||||||| || |||||| ||||||||||||||    
T  29434613 tccaccaatacttaacaaaagcacttaaaactatttttctctctc 29434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 37264312 - 37264360
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||| || |||||||| |||||||||    
T  37264312 ttataactctaattaatactactttcaccactcccaattcaatatattc 37264360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 37496505 - 37496457
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| || ||||| |||||||||    
T  37496505 ttataactttaattaatactactttcatcactctcaattcaatatattc 37496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 40038137 - 40038085
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||| | ||||||||||||||||||||| || ||| ||||||||    
T  40038137 caatacttaacaagatcatttaaaattatttttctctttccttcatttataca 40038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 47453998 - 47454034
Alignment:
Q  95 tccctttataactataattaatactactttcatcatt 131  Q
    |||||||||||||||||||| ||||||||||||||||    
T  47453998 tccctttataactataattattactactttcatcatt 47454034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 7426086 - 7426033
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    ||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||    
T  7426086 tccctccgtcccacaataactgagcca-tttgcaaaa-aaagtgtcccaaaataac 7426033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 23703914 - 23703969
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| |||||||||||||||| ||||||  ||||| |||||||| ||||||    
T  23703914 tttataactctaattaatactacttttatcattttcaattcaatatatttcatttt 23703969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 25778743 - 25778790
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  25778743 ttataactctaattaatactactttcatcacttccaattcaatatatt 25778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 25940856 - 25940809
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||| ||||||||||||||||||||| ||  ||||||||||||||    
T  25940856 tataactctaattaatactactttcatcactctaaatttaatatattc 25940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 28333171 - 28333218
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  28333171 tataactctaattaatattactttcatcactcccaattcaatatattc 28333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 30463092 - 30463147
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||   || |||||| |||||||||||||||||| ||||||||    
T  30463092 caccaatacttaacaagtgcacttaaaactatttttctctctcattcatttataca 30463147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 36117655 - 36117710
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||  ||||||||||||  ||||| |||||||||||    
T  36117655 tccctttataactttaattaatatcactttcatcattttcaattcaatatattcca 36117710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 44604586 - 44604535
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||||||||||||||| || ||| | |||||||||||    
T  44604586 tttataactctaattaatactactttcatcactctcaactcaatatattcca 44604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 46288544 - 46288489
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||||||||||||| | |  ||||| |||||||||||    
T  46288544 tccctttataactctaattaatactactttcataactttcaattcaatatattcca 46288489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 2846706 - 2846652
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| | || |||||| |||||||||||||| ||| ||||||||    
T  2846706 accaatacttaacaagagcacttaaaactatttttctctctcgttcatttataca 2846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 27234503 - 27234549
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||| |||||||||||| |||||||| || ||||||||||||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatt 27234549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 29645265 - 29645223
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctc 198  Q
    |||||||||||||||| |||| ||||||||| |||||||||||    
T  29645265 caccaatacttaacaagaacacttaaaattaattttctctctc 29645223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 40038222 - 40038176
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaata 143  Q
    ||||||||||| ||||||||||||||||||||| | | |||||||||    
T  40038222 cctttataactctaattaatactactttcatcacttcaaatttaata 40038176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 18235266 - 18235319
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    ||||||||||||||||   ||||||||||||||||| |||||| ||| ||||||    
T  18235266 caccaatacttaacaagtgcatttaaaattatttttttctctccttcatttata 18235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 37157168 - 37157217
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||| |||||||||||  ||||||||||  |||||||||||||||    
T  37157168 tttataactctaattaatacttttttcatcattttcaatttaatatattc 37157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 49100613 - 49100560
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| |||||||| ||| ||| |||||| |||||| |||||||||||    
T  49100613 cctttataactttaattaattctatttttatcatttccaattcaatatattcca 49100560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 2842161 - 2842113
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||| ||||||||||||||||||||||| ||  |||| ||||||||    
T  2842161 tttataattataattaatactactttcatcactctaaattcaatatatt 2842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 5724816 - 5724768
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||| ||||| | |||| ||||||||    
T  5724816 tttataactctaattaatactactttcttcatttctaattcaatatatt 5724768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 7425909 - 7425853
Alignment:
Q  156 caccaatacttaa-caaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||| ||| |||| ||||||  ||||||||||||||||| ||||||||    
T  7425909 caccaatacttaaacaagaacacttaaaaccatttttctctctcattcatttataca 7425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 11616555 - 11616611
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaa-tatattcca 150  Q
    ||||||||||||| |||||||||| ||||||| || |||||||| || |||||||||    
T  11616555 tccctttataactctaattaatacaactttcaccactcccaattcaattatattcca 11616611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 14649027 - 14648979
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  14649027 ttataactctaattaatattactttcatcactctcaattcaatatattc 14648979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 32775982 - 32776030
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||| |||||||||||||| || |||||||| |||||||||    
T  32775982 ttataactctaaataatactactttcaccactcccaattcaatatattc 32776030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 33584460 - 33584516
Alignment:
Q  2 tccctccgtcccataataactgagccatttttca-aaataaagtgtcccaaaataac 57  Q
    |||||||||||||||||||||||| ||||||  | ||| |||||||| |||||||||    
T  33584460 tccctccgtcccataataactgaggcattttcaataaaaaaagtgtctcaaaataac 33584516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 34064214 - 34064262
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  34064214 ttataactctaattaatattactttcatcactctcaattcaatatattc 34064262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 38181984 - 38181928
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||||| ||||||||||||||||||  | | |||||| ||||||||| |||||    
T  38181984 ctttataactctaattaatactactttcacaacttccaattcaatatattctatttt 38181928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 38589733 - 38589781
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  38589733 ttataacactaattaatactactttcaccactcccaattcaatatattc 38589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 39365226 - 39365013
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgag----tt--attttcaatacaataataattacnnnnnnnct 95  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||    ||  ||||||||||||||| |||||||             
T  39365226 tccctccgtcccataataactgagccatttaccaaaaaaaagtgtcccaaaataactgagccatttcaattttcaatacaatattaattactttttc--- 39365130  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaatta-tttttctc 194  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||| | || ||||||  | ||||||||    
T  39365129 ccctttataactctaattaatactattttcatcattcccaattcaatatattccactttgcaccaatacttaacaagagcacttaaaaccactttttctc 39365030  T
Q  195 tctcattcttttataca 211  Q
    |||| ||  ||||||||    
T  39365029 tctcctttatttataca 39365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 54493902 - 54493954
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  54493902 tccctttataactctaattaatactactttcatcatttccaatttaatatatt 54493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 54122255 - 54122200
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  54122255 caccaatacttaacaaaaacatttaaaactatttttctctctccttcatttataca 54122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 12744711 - 12744764
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaata 55  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  12744711 tccctccgtcccataataactgagccattttctaaaacaaagtgtcccaaaata 12744764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 15280603 - 15280661
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccattttcca 157  Q
    ||||||||  ||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  15280603 tttataaccctaattaatactactttcatcactcccaattcaatatattccactttcca 15280661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 32827417 - 32827365
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| ||||||||    
T  32827417 tccctttataactctaattaatactactttcatcatttctaattcaatatatt 32827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 41031570 - 41031618
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  41031570 tttataactttaattaatactactttcatcatttccaattcaatatatt 41031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 1334892 - 1334841
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||||| |||||||||||||||||| || |||||||| |||||||||    
T  1334892 cctttataactctaattaatactactttcaccactcccaattcaatatattc 1334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 5245406 - 5245461
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||| |||||||||| || ||||| |||||||||||    
T  5245406 tccctttataactctaattaataccactttcatcactctcaattcaatatattcca 5245461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 9017877 - 9017932
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||| || |||||| |||||||||||||| ||| ||||||||    
T  9017877 caccaatacttaacaaaagcacttaaaactatttttctctctctttcatttataca 9017932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 33994651 - 33994706
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||| ||||||||||||| || || |||||||||||    
T  33994651 tccctttataactctaattaataccactttcatcattctcagttcaatatattcca 33994706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 37041981 - 37041934
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  37041981 ttataactctaattaatactactttcatcatttccaattcaatatatt 37041934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 55415470 - 55415415
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||  ||||||||    
T  55415470 caccaatacttaacaaaaacagttaaaaccatttttctctctcatttatttataca 55415415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 26832071 - 26832117
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||    
T  26832071 tataactctaattaatactactttcatcactaccaatttaatatatt 26832117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 52325176 - 52325226
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  52325176 ttataactctaattaatactactttcgtcattctcaattcaatatattcca 52325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 32023214 - 32023161
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  32023214 tccctttataactctaattaatattactttcatcactctcaattcaatatattc 32023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 47684765 - 47684810
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatat 144  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||    
T  47684765 tttataactctaattaatactactttcatcactcccaattcaatat 47684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 26134812 - 26134764
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| |||||| |||||||||||||| |||||||| ||||||||    
T  26134812 tttataactctaattagtactactttcatcactcccaattcaatatatt 26134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 38600915 - 38600867
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  38600915 tttataactctaattaatactactttcatcactcccagttcaatatatt 38600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 42547214 - 42547166
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||    
T  42547214 ttatagctctaattaatactactttcatcactcccaattcaatatattc 42547166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 45392088 - 45392136
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||||||    
T  45392088 tttataactctaattaatattactttcatcatttccaattcaatatatt 45392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 10855070 - 10855125
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||| ||| ||||||| |||||| |||||||||||||| ||| ||||||||    
T  10855070 caccaatacataataaaaacacttaaaactatttttctctctccttcatttataca 10855125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 11251158 - 11251103
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||| | || ||||||| |||||| |||||||||| ||||||||    
T  11251158 caccaatacttaacaagagcacttaaaatcatttttttctctcattcatttataca 11251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 15082001 - 15082055
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| |||||||||||| |||||||| || |||||||||||||| ||||||    
T  15082001 tttataactctaattaatacta-tttcatcactctcaatttaatatatttcatttt 15082055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 21296534 - 21296479
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||| | |||||||||| ||||| ||||||| ||| ||||||||    
T  21296534 caccaatacttaacaagagcatttaaaatcattttcctctctccttcatttataca 21296479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 30261610 - 30261559
Alignment:
Q  100 ttataactataattaatactactttcatcattccc-aatttaatatattcca 150  Q
    |||||||| ||||||||||||||||||||| |||| |||| |||||||||||    
T  30261610 ttataactctaattaatactactttcatcactcccaaattcaatatattcca 30261559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 33994733 - 33994788
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||    
T  33994733 caccaatacttaacaagtgcacttaaaattatttttctctctccttcatttataca 33994788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 34081163 - 34081116
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||| | |||||||||||||||| ||||||| ||||||||||||||    
T  34081163 ttataaatttaattaatactacttttatcattctcaatttaatatatt 34081116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 39866584 - 39866529
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||| || |||||| ||||||||||| || ||| ||||||||    
T  39866584 caccaatacttaacaaaatcacttaaaactatttttctctttccttcatttataca 39866529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 54845539 - 54845492
Alignment:
Q  164 cttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  54845539 cttaacaaaaacacttaaaactatttttctctctccttcatttataca 54845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 21585616 - 21585554
Alignment:
Q  5 ctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    |||||| |||||||||||||| ||||||  | || |||||||||||||||||| |||| ||||    
T  21585616 ctccgttccataataactgagtcattttcaataaaaaagtgtcccaaaataactgagtcattt 21585554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 39825833 - 39825871
Alignment:
Q  109 taattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  39825833 taattaatactactttcatcattctcaattcaatatatt 39825871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 1922993 - 1923022
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  1922993 tccctccgtcccataataactgagccattt 1923022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 9218143 - 9218192
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||| ||||||||||||||||||||| || ||||| | |||||||    
T  9218143 tttataactctaattaatactactttcatcactctcaattcattatattc 9218192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 46786091 - 46786042
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||| || |||||||||||||||||  |||||||| ||||||||    
T  46786091 ctttataactttagttaatactactttcatcgctcccaattcaatatatt 46786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 54021571 - 54021518
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||||| | |||||||||||||||||| || ||| |||| |||||||||    
T  54021571 tccctttataattctaattaatactactttcaccactccgaattcaatatattc 54021518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 1923089 - 1923137
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  1923089 ttataacactaattaatactactttcaccactcccaattcaatatattc 1923137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 39329858 - 39329810
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||| | ||||||||||||||||||||| || ||||| |||||||||    
T  39329858 ttataattctaattaatactactttcatcactctcaattcaatatattc 39329810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 48409583 - 48409631
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||| || |||||||| || ||||||    
T  48409583 ttataactctaattaatactactttcaccactcccaattcaacatattc 48409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 48744126 - 48744178
Alignment:
Q  5 ctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    |||||||||||||||||||||||||||   |||| |||  |||||||||||||    
T  48744126 ctccgtcccataataactgagccatttgcaaaaaaaaaaagtcccaaaataac 48744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 2906684 - 2906794
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctcat 200  Q
    ||||||| ||||||||| || |||||||| || ||||||||||||||||| | | |||||||||||||| |||||||||||||  ||||||| |||||||    
T  2906684 tataactctaattaatattattttcatcactcacaatttaatatattccactatgcaccaatacttaacgaaaacatttaaaaccatttttcactctcat 2906783  T
Q  201 tcttttataca 211  Q
    || ||||||||    
T  2906784 tcatttataca 2906794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 32559161 - 32559216
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32559161 tttataactctaattaatactactttcatcactcctaatttaatatattccatttt 32559216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 39258385 - 39258326
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||    
T  39258385 tccctttataactttaattaataatactttcatcactctcaatttaatatattccatttt 39258326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 42024314 - 42024259
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  42024314 tccctttataactataattaatactactttcatcacttccaattcaatatattcca 42024259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 29644353 - 29644402
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  29644353 tttataactataattaatactactttcatcattctcaattcaatatattc 29644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 38976985 - 38977040
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  38976985 tccctttataactctaattaatactactttcatcattttcaattcaatatattcca 38977040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 41710257 - 41710202
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  41710257 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 41710202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 39979775 - 39979829
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  39979775 ccctttataactctaattaatattactttcatcatttccaattcaatatattcca 39979829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 4360515 - 4360466
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  4360515 tataactctaattaatactactttcatcattcacaattcaatatattcca 4360466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 49306583 - 49306636
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  49306583 cctttataactctaattaatactactttcatcactcctaattcaatatattcca 49306636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 40021056 - 40021008
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  40021056 ttataactctaattaatactactgtcatcactcccaatttaatatattc 40021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 4357641 - 4357696
Alignment:
Q  154 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    ||||||||||||||||||||||| ||||||| || |||||||||| ||| ||||||    
T  4357641 tccaccaatacttaacaaaaacacttaaaatcatctttctctctccttcatttata 4357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 26799325 - 26799270
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||||    
T  26799325 tttataactctaattaatagtactttcatcattctcaattcaatatattctatttt 26799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 35909604 - 35909549
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||| ||| |||||||||||||| ||| |||||| ||||||||    
T  35909604 caccaatacttaacaaatacacttaaaattatttttatctttcattcatttataca 35909549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 49448840 - 49448887
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  49448840 ttataactctaattaatactactttcatcattctcaattcaatatatt 49448887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 49812223 - 49812278
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||    
T  49812223 tccctttataactctaattaatactattttcatctttcccaatacaatatattcca 49812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 54729511 - 54729460
Alignment:
Q  160 aatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  54729511 aatacttaacaaaaacacttaaaactatttttctctctctttcatttataca 54729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 18509446 - 18509492
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  18509446 tataactataattaataatactttcatcactcccaattcaatatatt 18509492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 33047400 - 33047461
Alignment:
Q  6 tccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    ||||||||||||||| ||||||||||   |||| |||||||||||||||||| |||| ||||    
T  33047400 tccgtcccataataattgagccatttgcaaaaaaaaagtgtcccaaaataactgagtcattt 33047461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 43335131 - 43335074
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccattttcca 157  Q
    |||| ||||||||||||||||||||| ||| || ||||| ||||||||||| ||||||    
T  43335131 ttatgactataattaatactactttcttcactctcaattcaatatattccactttcca 43335074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 3686006 - 3686058
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  3686006 ccctttataactctaattaatattactttcatcactctcaattcaatatattc 3686058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 4354447 - 4354495
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||||||||||||||||||  | || |||||||||||||||    
T  4354447 ttataactataattaatactactttcacaactctcaatttaatatattc 4354495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 4357566 - 4357614
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||||||    
T  4357566 tttataactctaattaatactattttcatcactcccaattcaatatatt 4357614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 35998230 - 35998178
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| |||||||||||||||||| || || ||||| ||||||||    
T  35998230 tccctttataactctaattaatactactttcaccactctcaattcaatatatt 35998178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 41436480 - 41436528
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||||||    
T  41436480 ttataactctaattaatactactttcatcattcgcaattcaaaatattc 41436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 42185905 - 42185857
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  42185905 tttataactctaattaatactactttcatcactctcaattcaatatatt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 8294962 - 8295075
Alignment:
Q  35 aaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnctccctttataactataattaatactactttcatc 128  Q
    |||| ||||||||||||||||||||||| ||||      ||||||||||| |||||||        ||||||||||||| ||||| ||||||||||||||    
T  8294962 aaaaaaaagtgtcccaaaataaccgagtcatttcacttttcaatacaatattaattacctttt---tccctttataactctaatttatactactttcatc 8295058  T
Q  129 attcccaatttaatatatt 147  Q
      |||||||| ||||||||    
T  8295059 --tcccaattcaatatatt 8295075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 17237117 - 17237172
Alignment:
Q  154 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    ||||| |||||||||||||| || |||||| |||||||||||||| ||| ||||||    
T  17237117 tccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttata 17237172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 22496789 - 22496742
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaata 143  Q
    |||||||||||| ||||||||||||||||||||  || ||||||||||    
T  22496789 ccctttataactctaattaatactactttcatcgctctcaatttaata 22496742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 27977223 - 27977278
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| |||  ||||||||    
T  27977223 caccaatacttaacaaaaacacttaaaatcatttttcactctaatttatttataca 27977278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42544107 - 42544161
Alignment:
Q  1 ttccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataa 56  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||  |||||||    
T  42544107 ttccctccgtctcataataactgagcca-ttttcaaaaaaaagtgtcataaaataa 42544161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 47277790 - 47277743
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  47277790 ttataactataattaatactactttaatcactctcaattcaatatatt 47277743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 47846898 - 47846945
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| ||||||||||||||||||||| ||| |||| ||||||||    
T  47846898 ttataactctaattaatactactttcatcactcctaattcaatatatt 47846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 54729596 - 54729542
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||||||||||||  | ||||| |||||||||||    
T  54729596 tccctttataactctaattaatactactttcatca-cctcaattcaatatattcca 54729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 4360439 - 4360385
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttatac 210  Q
    |||||||||||||||||| || ||||||  |||||||||| |||||| |||||||    
T  4360439 caccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac 4360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 22872496 - 22872446
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||||    
T  22872496 ttataactctaattaatattactttcatcactctcaattcaatatattcca 22872446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 37309694 - 37309744
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||    
T  37309694 cctttataactctaattaatattactttcatcactctcaattcaatatatt 37309744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 40020979 - 40020933
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattc 202  Q
    ||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  40020979 caccaatacttgacaaaaacattcaaaaccatttttctctctcattc 40020933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 4360616 - 4360587
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  4360616 tccctccgtcccataataactgagccattt 4360587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 18849967 - 18849903
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    ||||||||||||| ||||| |||||||||| | |||| ||| |||||||||||||| |||| ||||    
T  18849967 tccctccgtcccacaataattgagccatttgt-aaaaaaaaatgtcccaaaataactgagtcattt 18849903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 29656469 - 29656520
Alignment:
Q  8 cgtcccataataactgagccatttt---tcaaaataaagtgtcccaaaataa 56  Q
    |||||||||||||||||||||||||   | |||| |||||||||||||||||    
T  29656469 cgtcccataataactgagccatttttaataaaaaaaaagtgtcccaaaataa 29656520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 39053010 - 39052961
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||| |||||||||||||||||| || || ||||| |||||||||    
T  39053010 tttataactctaattaatactactttcaccactctcaattcaatatattc 39052961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 42544205 - 42544258
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| ||||||||| |||||| |||| || ||||| |||||||||||    
T  42544205 cctttataactctaattaatattacttttatcactcacaattcaatatattcca 42544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 9052158 - 9052110
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  9052158 ttataacactaattaatactactttcatcattctgaattcaatatattc 9052110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 10099833 - 10099785
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  10099833 ttataactctaattaatactactttcacaactcccaattcaatatattc 10099785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 21954535 - 21954491
Alignment:
Q  103 taactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  21954535 taactataattaatacaactttcatcattcacaattcagtatatt 21954491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 22020618 - 22020570
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||| ||||||||||| ||||| ||||| |||||||||    
T  22020618 ttataactctaattattactactttcaccattctcaattcaatatattc 22020570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 25250701 - 25250653
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||| |||||||| ||  ||||||||||||||    
T  25250701 ttataactctaattaatactagtttcatcactcttaatttaatatattc 25250653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 29550835 - 29550787
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  29550835 ttataactctaattaatactactttcacaactcccaattcaatatattc 29550787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 38319910 - 38319958
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  ||||||||||||||||||||| || ||||| |||||||||    
T  38319910 ttataacactaattaatactactttcatcactctcaattcaatatattc 38319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 39976500 - 39976448
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||  | ||||||||||||||||||| || ||||| |||||||||||    
T  39976500 ctttataacactgattaatactactttcatcactctcaattcaatatattcca 39976448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 44020872 - 44020820
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||| |||| |||||||||||||||||| | |||| ||||| |||||    
T  44020872 ctttataactctaatcaatactactttcatcatttctaattcaatatgttcca 44020820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 47787956 - 47787924
Alignment:
Q  99 tttataactataattaatactactttcatcatt 131  Q
    ||||||||| |||||||||||||||||||||||    
T  47787956 tttataactctaattaatactactttcatcatt 47787924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 50714596 - 50714636
Alignment:
Q  115 atactactttcatcattcccaatttaatatattccattttc 155  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  50714596 atactactttcatcattctcaattcaatatattccactttc 50714636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 29615792 - 29615847
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  29615792 tccctttataactttaattaatactactttcatcattcccaattcaatatattcca 29615847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 44790535 - 44790480
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  44790535 tccctttataactctaattaatactactttcaccattcccaattcaatatattcca 44790480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 5391946 - 5392098
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnct 95  Q
    ||||||||| ||||||||  ||||||||||   |||| |||||||| ||||||||| |||| ||||      ||||||||||| |||||||        |    
T  5391946 tccctccgttccataatatttgagccatttgcaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattactttttt--t 5392043  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| |||||||||||||||||| || |||||||| |||||||||||    
T  5392044 ccctttataactctaattaatactactttcaacactcccaattcaatatattcca 5392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 32967388 - 32967335
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  32967388 cctttataactctaattaatactactttcatcattctcaattcaatatattcca 32967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 45425482 - 45425534
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  45425482 ctttataactctaattaatattactttcatcattcctaatttaatatattcca 45425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 38252551 - 38252496
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||| |||||||||||||||||| |||||| |||||||||||    
T  38252551 tccctttataactctaatcaatactactttcatcatttccaattcaatatattcca 38252496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 27987657 - 27987711
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  27987657 ttataactataattaatactactttcatcactcacaattcaatatatttcatttt 27987711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 28044959 - 28045013
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  28044959 ttataactataattaatactactttcatcactcacaattcaatatatttcatttt 28045013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 2195467 - 2195515
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  2195467 ttataactctaattaatactactttcatcactcccaattcaatatattc 2195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 7258475 - 7258427
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  7258475 ttataactctaattaatactactttcatcactcccaattcaatatattc 7258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 12653681 - 12653736
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||| |||||||||||    
T  12653681 tccctttataactctgattaatattactttcatcattctcaattcaatatattcca 12653736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 29615874 - 29615929
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||   |||||||||||||||||||||||| ||| ||||||||    
T  29615874 caccaatacttaacaagtgcatttaaaattatttttctctctccttcatttataca 29615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 38252647 - 38252592
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    |||||||||||||||||||||||| |||||   |||| ||||||||||||||||||    
T  38252647 tccctccgtcccataataactgagtcatttgcaaaaaaaaagtgtcccaaaataac 38252592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 5962585 - 5962531
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| ||||||||| || |||||||| |||||||| |||||||||||    
T  5962585 ccctttataactctaattaatattaatttcatcactcccaattcaatatattcca 5962531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 42412491 - 42412441
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||||    
T  42412491 ttatagctctaattaatactactttcatcactcccaattcaatatattcca 42412441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 44790631 - 44790578
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataa 56  Q
    ||||||||||||||||||||||||| | ||| ||||| |||||||||||||||||    
T  44790631 tccctccgtcccataataactgagcta-tttgcaaaaaaaagtgtcccaaaataa 44790578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 138936 - 138996
Alignment:
Q  6 tccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    ||||||||||||||||||||||| ||| | ||| ||| ||||||||||||||||||| ||||    
T  138936 tccgtcccataataactgagcca-tttgcgaaaaaaaatgtcccaaaataaccgagtcattt 138996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 33746330 - 33746273
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||||||||||||||||||| ||||||||||   |||| |||||||||| ||||    
T  33746330 cctttataactataattaatactattttcatcatttttaattcaatatattccttttt 33746273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 27868433 - 27868385
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||| | |||||||||||||||||||||||| ||||| |||||||||    
T  27868433 ttataattttaattaatactactttcatcattctcaattcaatatattc 27868385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 33826230 - 33826278
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||| ||||||||||||||||||| ||||| |||||||||    
T  33826230 ttataactctaatcaatactactttcatcattctcaattcaatatattc 33826278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 139098 - 139153
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||| |  ||||||||| |||||| |||||||||| ||||||||    
T  139098 caccaatacttaacaagagaatttaaaatcatttttatctctcattcatttataca 139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 2349348 - 2349399
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||| |||||||| |||| |||||| |||||||||||    
T  2349348 tttataactctaattaatattactttcaacatttccaattcaatatattcca 2349399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 10729027 - 10728980
Alignment:
Q  103 taactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  10729027 taactctaattaatactactttaatcactcccaattcaatatattcca 10728980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 11637140 - 11637187
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||||||||||||||||| || || ||||| |||||||||    
T  11637140 tataactataattaatactactttcaccactctcaattcaatatattc 11637187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 22490389 - 22490440
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| |||||||||| ||| ||||||||| ||||| |||||||||||    
T  22490389 tttataactctaattaatacaactatcatcattctcaattcaatatattcca 22490440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 28802761 - 28802816
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| || |||||||| || ||||| |||||||||||    
T  28802761 tccctttataactctaattaataatattttcatcactctcaattcaatatattcca 28802816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 39171541 - 39171592
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| |||||||||||| |||||||| || ||||| |||||||||||    
T  39171541 tttataactctaattaatactattttcatcactcacaattcaatatattcca 39171592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 21587177 - 21587227
Alignment:
Q  5 ctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaata 55  Q
    ||||||| ||||||||||||| ||||||  |||| ||||||||||||||||    
T  21587177 ctccgtctcataataactgagtcattttcaaaaacaaagtgtcccaaaata 21587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 45197690 - 45197739
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||||||    
T  45197690 caatacttaacaaaaacacttaaaatcattttt-tctctcattcatttata 45197739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 138732 - 138691
Alignment:
Q  154 tccaccaatacttaacaaaaacatttaaaattatttttctct 195  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||    
T  138732 tccaccaatacataacaaaaacacttaaaatcatttttctct 138691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 2119614 - 2119679
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    ||||||||| |||||||||||||| ||||| | |  | |||||||||||||||||| ||| |||||    
T  2119614 tccctccgttccataataactgagtcatttgtaattaaaaagtgtcccaaaataactgagctattt 2119679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 5423267 - 5423222
Alignment:
Q  105 actataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||||||||||| ||||||| ||||| ||||| |||||    
T  5423267 actataattaatactacttttatcattctcaattcaatatcttcca 5423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 34287190 - 34287137
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| | ||||||||| ||||||||||||| | |||| |||||||||||    
T  34287190 cctttataattctaattaatattactttcatcatttctaattcaatatattcca 34287137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 8418410 - 8418362
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| || ||||| | |||||||    
T  8418410 ttataactctaattaatactactttcatcactctcaattcagtatattc 8418362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 9014610 - 9014646
Alignment:
Q  111 attaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9014610 attaatactactttcatcattcacaattcaatatatt 9014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 14689959 - 14690007
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  14689959 ttataacactaattaatactactttcaccactcccaattcaatatattc 14690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 14748814 - 14748766
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| ||||| ||||| |||||||||    
T  14748814 ttataacactaattaatactactttcaccattctcaattcaatatattc 14748766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 21587290 - 21587326
Alignment:
Q  114 aatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||||||| |||||||| |||||||||||    
T  21587290 aatactactttcatcactcccaattcaatatattcca 21587326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 28791307 - 28791355
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  28791307 ttataactctaattaatactactttcacaactcccaattcaatatattc 28791355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 31410639 - 31410587
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttat 208  Q
    |||||||| |||||||||||| |||||| | |||||||||||| ||| |||||    
T  31410639 caccaatatttaacaaaaacacttaaaactgtttttctctctccttcatttat 31410587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 32241452 - 32241400
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||| |||| ||||||| |||||| |||||| ||| ||||||||    
T  32241452 caatacttaacaagaacacttaaaatcatttttatctctccttcatttataca 32241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 44615477 - 44615425
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||| ||||||||| || |||||||| || ||||| |||||||||    
T  44615477 ccctttataactctaattaatattattttcatcactctcaattcaatatattc 44615425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 28839333 - 28839388
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28839333 tccctttataactataattaatactactttcatcactcccaattcaatatattcca 28839388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 8327711 - 8327770
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||    
T  8327711 tccctttataactctaattaatactactttcatcactctcaattcaatatattccatttt 8327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 11324242 - 11324297
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||    
T  11324242 tccctttataactataattaatactacattcatcactctcaattcaatatattcca 11324297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 11482263 - 11482318
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||    
T  11482263 tccctttataactataattaatactacattcatcactctcaattcaatatattcca 11482318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 38664399 - 38664454
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  38664399 tttataactctaattaatactactttcatcattcctaattcaatatattcaatttt 38664454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 51749297 - 51749242
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  51749297 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 51749242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 8327794 - 8327848
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  8327794 accaatacttaacaagagcacttaaaattatttttctctctcattcatttataca 8327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 42309430 - 42309475
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatat 144  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  42309430 tttataactctaattaatactactttcatcattccaaatttaatat 42309475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 3555762 - 3555614
Alignment:
Q  4 cctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnctcc 97  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||||||||  |||||||||      ||| ||||  | |||||||        |||    
T  3555762 cctccgtcccataataactgagtcatttttaataa-aaagtgtcccaaaataagtgagttatttcatttttcattacatcattaattacttttt---tcc 3555667  T
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
     ||||||||| ||||||||||||||||||||  |||||||| |||||||||||    
T  3555666 ttttataactctaattaatactactttcatctatcccaattcaatatattcca 3555614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 26755970 - 26756022
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| ||||||||    
T  26755970 tccctttataactctaattaatactactttcatcattttcaattcaatatatt 26756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 27698806 - 27698858
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  27698806 tccctttataactctaattaatattactttcatcattctcaattcaatatatt 27698858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 29225752 - 29225800
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  29225752 ttataactctaattaatactactttcatcactcccaattcaatatattc 29225800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 32587844 - 32587896
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||    
T  32587844 caatacttaacaaaaacacttaaaattatttttctctcaccttcatttataca 32587896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 42926210 - 42926265
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||| |||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  42926210 caccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttataca 42926265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 45889358 - 45889307
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  45889358 tttataactctaattaatactactttcatcattcataattcaatatattcca 45889307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 46536334 - 46536389
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||| ||||||| ||||||||||||||||||||| ||  ||||||||||||||||    
T  46536334 tccctctataactctaattaatactactttcatcactcttaatttaatatattcca 46536389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 8773141 - 8773291
Alignment:
Q  7 ccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagtta------ttttcaatacaataataattac-nnnnnnnctccct 99  Q
    ||||||||||||||||||| |||||   |||| |||||||||||||||||| ||| ||      ||||||||| |||| |||||||         ||| |    
T  8773141 ccgtcccataataactgagtcatttgcaaaaaaaaagtgtcccaaaataactgagctatttcatttttcaatagaatattaattacttttttttttcctt 8773240  T
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||| ||||||||||||||||||||| | | | ||||||||||||||    
T  8773241 ttataactctaattaatactactttcatcacttctagtttaatatattcca 8773291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 28839416 - 28839470
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| | ||||||||| |||||||||||||| ||| ||||||||    
T  28839416 accaatacttaacaagagcatttaaaactatttttctctctccttcatttataca 28839470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 36467229 - 36467172
Alignment:
Q  154 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||   || |||||| |||||||||||||||||| ||||||||    
T  36467229 tccaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttataca 36467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 46496014 - 46496067
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| |||||||||||||||||||||  || |||| |||||||||||    
T  46496014 cctttataactctaattaatactactttcatcacgcctaattcaatatattcca 46496067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 49494275 - 49494222
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| ||||||||| ||||||||||||| | |||| |||||||||||    
T  49494275 cctttataactttaattaatattactttcatcatttctaattcaatatattcca 49494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 19533033 - 19532997
Alignment:
Q  95 tccctttataactataattaatactactttcatcatt 131  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19533033 tccctttataactttaattaatactactttcatcatt 19532997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 25842598 - 25842646
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  25842598 ttataactataattaacactactttcatcattctcaatgcaatatattc 25842646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 35622888 - 35622840
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||| ||| |||||| |||||||||    
T  35622888 ttataactctaattaatactactttcataattgccaattcaatatattc 35622840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 36232898 - 36232850
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||| |||| |||||| |||||||||    
T  36232898 ttataactctaattaatactactttcaccatttccaattcaatatattc 36232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 46273239 - 46273291
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||    
T  46273239 caatacttgacaaaaacattcaaaattatttttctatcttattcatttataca 46273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 50267548 - 50267500
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||| | ||||||||| |||||||||||||||||||| ||||||||    
T  50267548 tttataattctaattaatattactttcatcattcccaattcaatatatt 50267500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 36467308 - 36467257
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||  ||||||||||| |||||||||| |||||| ||||||||    
T  36467308 ccctttataactcaaattaatactattttcatcatttccaattcaatatatt 36467257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 48242700 - 48242649
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||| |||||| ||||||| ||||| |||||||||||    
T  48242700 tttataactttaattaatattacttttatcattctcaattcaatatattcca 48242649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 52830446 - 52830391
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||||  || | ||||||||||||||||||| ||| ||||||||    
T  52830446 caccaatacttaacaaatgcactcaaaattatttttctctctccttcatttataca 52830391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 10587690 - 10587636
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||  ||||||||||||||||||||| || ||||| ||||||||| |||||    
T  10587690 ttataacactaattaatactactttcatcactctcaattcaatatattctatttt 10587636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 51749214 - 51749160
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||| |||| ||||||| | ||||||||||| ||| ||||||||    
T  51749214 accaatacttaacaagaacacttaaaatcagttttctctctccttcatttataca 51749160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 6787327 - 6787376
Alignment:
Q  160 aatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    |||| |||||||| |||||||||| |||||||||||||| ||| ||||||    
T  6787327 aatatttaacaaatacatttaaaactatttttctctctctttcgtttata 6787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 17724824 - 17724775
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||| |||||||||||| |||||||| |||||||| |||| ||||    
T  17724824 tttataactctaattaatactattttcatcactcccaattcaataaattc 17724775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 27831854 - 27831895
Alignment:
Q  109 taattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||| |||||||| ||||| |||||    
T  27831854 taattaatactactttcatcactcccaattcaatatcttcca 27831895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 28277149 - 28277100
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||| |||||||||| ||||||||||||  ||||| ||||||||    
T  28277149 ctttataactctaattaataccactttcatcattttcaattcaatatatt 28277100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 29225617 - 29225588
Alignment:
Q  2 tccctccgtcccataataactgagccattt 31  Q
    ||||||||||||||||||||||||||||||    
T  29225617 tccctccgtcccataataactgagccattt 29225588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 7785388 - 7785336
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||| |||||||||||||||| |||  || ||||| ||||||||    
T  7785388 tccctttataactctaattaatactacttttatcgctctcaattcaatatatt 7785336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 7787672 - 7787716
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaattta 140  Q
    ||||||||||||||||||||||||| || ||||||| ||| ||||    
T  7787672 ccctttataactataattaatactatttccatcatttccacttta 7787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 29756251 - 29756203
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  29756251 ttataacactaattaatactactttcaccactcccaattcaatatattc 29756203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41686702 - 41686636
Alignment:
Q  1 ttccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||    
T  41686702 ttccctccatcccataataactgagccatttgtaaaaataaagtgtcccaaaataactgagtcattt 41686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 42575848 - 42575697
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagtta------ttttcaatacaataataattacnnnnnnnct 95  Q
    ||||||||||||| |||||||||||||||| | |||  ||||||||||||||||||||||  |      |||||||||||||| |||||||        |    
T  42575848 tccctccgtcccacaataactgagccatttgtaaaagaaaagtgtcccaaaataaccgagccatttcacttttcaatacaatattaattacttttt---t 42575752  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| ||||||||||||||||||  | | |||||| |||||||||||    
T  42575751 ccctttataactttaattaatactactttcacaacttccaattcaatatattcca 42575697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 11099590 - 11099536
Alignment:
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  11099590 ccctttataactctaattaatactactttcatcactcccaattcaatatattcca 11099536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 41594878 - 41594833
Alignment:
Q  157 accaatacttaacaaaaacatttaaaattatttttctctctcattc 202  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  41594878 accaatacttgacaaaaacatttaaaattatttttctctctcattc 41594833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 11099509 - 11099454
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  11099509 caccaatacttaacaaaaacacttaaaactatttttctctctctttcatttataca 11099454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 17243068 - 17243013
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  17243068 tccctttataactctaattaatactactttcatcactctcaattcaatatattcca 17243013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 20189886 - 20189941
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  20189886 tccctttataactctaattaatattactttcatcattctcaattcaatatattcca 20189941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 35334636 - 35334585
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  35334636 tttataactctaattaatactactttcatcactcccaattcaatatattcca 35334585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 858331 - 858388
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||||| ||||||||||||||||||||| || ||||| |||||||| ||||||    
T  858331 cctttataactctaattaatactactttcatcactctcaattaaatatatttcatttt 858388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 28057859 - 28057807
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| ||||||||    
T  28057859 caatacttaacaagtacatttaaaattatttttctctctccttcatttataca 28057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 4412377 - 4412432
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||||||||| |||||||||| | |||| |||||||||||    
T  4412377 tccctttataactctaattaatactattttcatcatttctaattcaatatattcca 4412432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 5358023 - 5357972
Alignment:
Q  6 tccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    |||||||||||||||||||| ||||||| | || ||||||||||||||||||    
T  5358023 tccgtcccataataactgagacatttttaataaaaaagtgtcccaaaataac 5357972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 6173089 - 6173042
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  6173089 ttataactataattaatactactttcatcactcacaattcaatatatt 6173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 6610733 - 6610883
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagtta------ttttcaatacaataataattacnnnnnnnct 95  Q
    |||||||||||||||||||||||| ||||||  |||| |||  ||||||||||||| |||| |      |||| ||||||||| |||||||        |    
T  6610733 tccctccgtcccataataactgagtcattttcaaaaaaaaaaagtcccaaaataactgagtcatttcacttttaaatacaatattaattacttttttt-t 6610831  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    | |||||||||| ||||||||| ||||||||||| ||| |||| ||||||||    
T  6610832 ctctttataactttaattaatattactttcatcactccgaattcaatatatt 6610883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 13135747 - 13135802
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| |||||| |||||||||||||| ||| |||| |||||||||||    
T  13135747 tccctttataactttaattactactactttcatcactcctaattcaatatattcca 13135802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 41184115 - 41184166
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| |||||||    
T  41184115 tttataactctaattaatattactttcatcattctcaatttaatttattcca 41184166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 7613703 - 7613753
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    ||||||||||||||||||||| |||||| |||||| |||||| ||||||||    
T  7613703 cctttataactataattaatattacttttatcatttccaattcaatatatt 7613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 13717004 - 13717053
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatat 144  Q
    ||||||||||||| ||||||||| || ||||||||||| |||||||||||    
T  13717004 tccctttataactctaattaatattattttcatcattctcaatttaatat 13717053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 24231089 - 24231134
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattctt 204  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  24231089 caatacttaacaagaacagttaaaatcatttttctctctcattctt 24231134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 25344840 - 25344799
Alignment:
Q  107 tataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  25344840 tataattaatactactttcatcattctcaattcaatatattc 25344799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 35646121 - 35646068
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    |||||||||||||||| | || ||||||| ||||||||||||||||| ||||||    
T  35646121 caccaatacttaacaagatcacttaaaatcatttttctctctcattcatttata 35646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 72214 - 72166
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  72214 ttataaatctaattaatactactttcatcactcctaatttaatatattc 72166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 39212660 - 39212612
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  39212660 ttataactctaattaatactactttcatcgctcccaattcaatatattc 39212612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 3725180 - 3725235
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||  ||||||||||    
T  3725180 tccctttataactctaattaatattactttcatcactcacaattcgatatattcca 3725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 5816814 - 5816861
Alignment:
Q  161 atacttaacaaaaacatttaaaattatttttctctctcattcttttat 208  Q
    |||||||| ||||||||||||||| ||||||||||||| ||| |||||    
T  5816814 atacttaataaaaacatttaaaatcatttttctctctccttcatttat 5816861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 6629502 - 6629455
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||| ||||||||  ||||||||||| |||||||||||||||||    
T  6629502 ttataactctaattaattttactttcatcactcccaatttaatatatt 6629455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 13422461 - 13422414
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  13422461 ttataactataattaatattactttcatcactctcaattcaatatatt 13422414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 19817114 - 19817169
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    |||| |||||||| |||||||||||||||| | |||| ||| ||||||||||||||    
T  19817114 tcccaccgtcccaaaataactgagccatttgtaaaaaaaaattgtcccaaaataac 19817169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 33988194 - 33988249
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||| ||| ||||||||| | |||||||| |||||||||||    
T  33988194 tccctttataactctaattcatattactttcattactcccaattcaatatattcca 33988249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 33988276 - 33988331
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||| ||||||  |||||||| |||| ||| ||||||||    
T  33988276 caccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttataca 33988331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 7276282 - 7276347
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttatttt 68  Q
    ||||||||||||| ||||||||||||| ||| ||||| |||  |||| |||||||| ||||||||||    
T  7276282 tccctccgtcccaaaataactgagcca-tttgcaaaaaaaaaagtcctaaaataactgagttatttt 7276347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 39183736 - 39183686
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||||    
T  39183736 ttataactctaattaatattactttcatcactctcaattcaatatattcca 39183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 41268337 - 41268383
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatat 146  Q
    |||||||||||||||||| ||||||||||| ||| |||| |||||||    
T  41268337 ttataactataattaatattactttcatcactccaaattcaatatat 41268383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 42211329 - 42211379
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||||||  |||||||||||||||||||| || ||||| ||||||||    
T  42211329 cctttataactcaaattaatactactttcatcactcacaattcaatatatt 42211379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 42479541 - 42479595
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    |||||||||||||||||  |||||| ||||||  |||||||||||||| ||||||    
T  42479541 ttataactataattaatgttacttttatcattttcaatttaatatattgcatttt 42479595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 6735465 - 6735416
Alignment:
Q  101 tataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||| ||||||||| ||||||||||| | | ||||||||||||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattcca 6735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 8692930 - 8692873
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    ||||||||||| ||||||||| ||||||||  | | ||||||||||||||| ||||||    
T  8692930 cctttataactctaattaatattactttcacaacttccaatttaatatatttcatttt 8692873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 42871087 - 42871046
Alignment:
Q  109 taattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  42871087 taattaatactacttttatcaatcccaagttaatatattcca 42871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 86981 - 87017
Alignment:
Q  109 taattaatactactttcatcattcccaatttaatata 145  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  86981 taattaatactactttcatcactccaaatttaatata 87017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 33012351 - 33012403
Alignment:
Q  98 ctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    |||||||||  || |||||||||||||||||| ||||||||  ||||||||||    
T  33012351 ctttataacgctagttaatactactttcatcactcccaattctatatattcca 33012403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 33109271 - 33109426
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgag-----tta-ttttcaatacaataataattacnnnnnnnct 95  Q
    ||||||||||||||||||||||||| ||||   |||| ||||||| |||||| ||| |||     ||| |||||||||||||| ||||||         |    
T  33109271 tccctccgtcccataataactgagctatttgcaaaaaaaaagtgttccaaaacaactgagccattttacttttcaatacaatactaattatttttt---t 33109367  T
Q  96 ccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 154  Q
    || ||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||    
T  33109368 ccatttataactctaattaatactactttcatcattctcaattcaatatatttcatttt 33109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 15081417 - 15081472
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||    
T  15081417 tccctttataactctaattaatactactttcataatttccaattcaatatattcca 15081472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 30064062 - 30064007
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  30064062 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 30064007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 117083 - 117128
Alignment:
Q  105 actataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  117083 actataattaatactactttcatcactctcaattcaatatattcca 117128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 33018052 - 33018004
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||| || |||||||| |||||||||    
T  33018052 ttataactctaattaatactactttcaccactcccaattcaatatattc 33018004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 34441890 - 34441938
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| ||||||||||||||||||||| ||  ||||||||||||||    
T  34441890 ttataactttaattaatactactttcatcactcttaatttaatatattc 34441938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 2310396 - 2310349
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatatt 147  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||||    
T  2310396 ttataacattaattaatactactttcatcactcccaattcaatatatt 2310349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 7301193 - 7301138
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||| ||||| |||||||||||||  ||||| |||||||||||    
T  7301193 tccctttataactctaactaatattactttcatcattttcaattcaatatattcca 7301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 31265855 - 31265910
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||||| | || |||||| |||||||||||||| ||| ||||||||    
T  31265855 caccaatacttaacaagagcacttaaaactatttttctctctccttcatttataca 31265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 2657977 - 2658030
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 209  Q
    ||||||||||||||||||  | ||||||| |||||||||||| |||| ||||||    
T  2657977 caccaatacttaacaaaagtacttaaaatcatttttctctcttattcatttata 2658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 4552908 - 4552956
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  ||||||||| |||||||| || ||||||||||||||||||    
T  4552908 ttataacactaattaatattactttcaccactcccaatttaatatattc 4552956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 7739546 - 7739494
Alignment:
Q  159 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||  |||||||    
T  7739546 caatacttaacaaaaacattttaaactatttttctatctctttcacttataca 7739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 15081324 - 15081376
Alignment:
Q  5 ctccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataac 57  Q
    ||||||||||||||||||||| ||| |   |||| ||||||||||||||||||    
T  15081324 ctccgtcccataataactgagtcatctgcgaaaaaaaagtgtcccaaaataac 15081376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 15321333 - 15321285
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| ||||| ||||| |||||||||    
T  15321333 ttataacactaattaatactactttcaacattctcaattcaatatattc 15321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 15371971 - 15371923
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  15371971 ttataacactaattaatactactttcaccactcccaattcaatatattc 15371923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 33921678 - 33921642
Alignment:
Q  2 tccctccgtcccataataactgagccatttttcaaaa 38  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  33921678 tccctccgtcccgtaataactgagccatttttaaaaa 33921642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 8883 - 8936
Alignment:
Q  97 cctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  8883 cctttataactctaattaatattactttcatcattctcaattcaatatattcca 8936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 14454 - 14505
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  14454 tttataactctaattaatactactttcatcattttcaattcaatatattcca 14505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 394772 - 394827
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| | |||||||||    
T  394772 tccctttataactctaattaatactactttcatcactctcaattcactatattcca 394827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 8949 - 8997
Alignment:
Q  163 acttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||||| ||||||||||||||||||||  ||| ||||||||    
T  8949 acttaacaaaaacacttaaaattatttttctctcttcttcatttataca 8997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 9662 - 9619
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatt 138  Q
    ||||||||||||| ||||||||||||||||||||| || |||||    
T  9662 tccctttataactctaattaatactactttcatcactctcaatt 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 26320 - 26371
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||| ||||||||| |||||| |||||| |||||| |||||||||||    
T  26320 tttataactctaattaatattacttttatcatttccaattcaatatattcca 26371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 98819 - 98874
Alignment:
Q  95 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||||||||| ||||||||| || |||||||| || ||||| |||||||||||    
T  98819 tccctttataactctaattaatattattttcatcactctcaattcaatatattcca 98874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 98901 - 98956
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 211  Q
    |||||||||||| ||| | || ||||||| ||||||||||||||||| ||||||||    
T  98901 caccaatacttatcaagagcacttaaaatcatttttctctctcattcatttataca 98956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 97962 - 98022
Alignment:
Q  7 ccgtcccataataactgagccatttttcaaaataaagtgtcccaaaataaccgagttattt 67  Q
    ||||||||||||||||||| |||||   ||||  ||||||| |||||||||||||| ||||    
T  97962 ccgtcccataataactgagtcatttgcaaaaaataagtgtctcaaaataaccgagtcattt 98022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 26611 - 26662
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattcca 150  Q
    ||||||| | ||||||||||||||||||||| || ||||| |||||||||||    
T  26611 tttataattctaattaatactactttcatcactcgcaattcaatatattcca 26662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 5816 - 5865
Alignment:
Q  99 tttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    ||||||||| |||||||||||||||||| || || ||||| |||||||||    
T  5816 tttataactttaattaatactactttcaccactctcaattcaatatattc 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 352492 - 352451
Alignment:
Q  156 caccaatacttaacaaaaacatttaaaattatttttctctct 197  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  352492 caccaatacttaacaaagacactcaaaattatttttctctct 352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 12544 - 12496
Alignment:
Q  100 ttataactataattaatactactttcatcattcccaatttaatatattc 148  Q
    |||||||| |||||||||||||||||| |||||  |||| |||||||||    
T  12544 ttataactctaattaatactactttcaccattcttaattcaatatattc 12496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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