View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6900_low_4 (Length: 1053)

Name: NF6900_low_4
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6900_low_4
NF6900_low_4
[»] chr4 (43 HSPs)
chr4 (1-684)||(41779621-41780314)
chr4 (536-684)||(41774644-41774792)
chr4 (932-1044)||(15560463-15560577)
chr4 (930-1044)||(22089476-22089589)
chr4 (932-1042)||(41115618-41115728)
chr4 (528-686)||(8480853-8481011)
chr4 (938-1044)||(6640891-6640997)
chr4 (932-1044)||(8686244-8686353)
chr4 (932-1028)||(11914864-11914960)
chr4 (932-1044)||(44397403-44397516)
chr4 (623-685)||(52189185-52189247)
chr4 (955-1044)||(11900325-11900413)
chr4 (930-1048)||(29681315-29681434)
chr4 (932-1044)||(3792527-3792640)
chr4 (932-1047)||(19611171-19611288)
chr4 (932-1044)||(22676362-22676475)
chr4 (931-1044)||(29120559-29120675)
chr4 (930-1044)||(54679052-54679168)
chr4 (932-1042)||(12599948-12600060)
chr4 (616-680)||(23545342-23545406)
chr4 (561-683)||(8479652-8479775)
chr4 (932-1044)||(24628699-24628814)
chr4 (993-1042)||(17538921-17538970)
chr4 (641-686)||(30829925-30829970)
chr4 (641-686)||(52190387-52190432)
chr4 (623-671)||(31409326-31409374)
chr4 (932-1047)||(23120732-23120848)
chr4 (932-1044)||(37436332-37436445)
chr4 (932-1011)||(17788874-17788954)
chr4 (932-1044)||(23749715-23749833)
chr4 (935-1044)||(15134915-15135026)
chr4 (623-684)||(31410610-31410671)
chr4 (932-1044)||(14905127-14905242)
chr4 (932-995)||(40859900-40859963)
chr4 (934-1044)||(56033722-56033835)
chr4 (994-1037)||(10661995-10662038)
chr4 (994-1037)||(10876140-10876183)
chr4 (926-1017)||(14605735-14605829)
chr4 (932-984)||(20976646-20976699)
chr4 (929-982)||(31267577-31267630)
chr4 (932-1044)||(3106218-3106329)
chr4 (995-1044)||(14357599-14357648)
chr4 (932-1047)||(16631631-16631749)
[»] chr8 (42 HSPs)
chr8 (1-684)||(5014192-5014885)
chr8 (536-684)||(5005708-5005856)
chr8 (934-1044)||(18771889-18771997)
chr8 (932-1044)||(43644073-43644185)
chr8 (932-1047)||(17007500-17007617)
chr8 (954-1044)||(19706726-19706815)
chr8 (931-1044)||(30422277-30422392)
chr8 (932-1044)||(25163261-25163375)
chr8 (932-1044)||(19957185-19957299)
chr8 (932-1044)||(45539331-45539445)
chr8 (932-1047)||(17541333-17541450)
chr8 (623-683)||(3872286-3872346)
chr8 (619-684)||(12887721-12887786)
chr8 (964-1044)||(15336934-15337015)
chr8 (964-1044)||(15425999-15426080)
chr8 (964-1044)||(15517303-15517384)
chr8 (623-684)||(17863466-17863527)
chr8 (932-1044)||(22672968-22673080)
chr8 (954-1047)||(12758586-12758680)
chr8 (932-1044)||(14990935-14991049)
chr8 (954-1047)||(19153237-19153331)
chr8 (931-1047)||(36104533-36104651)
chr8 (618-684)||(12888239-12888305)
chr8 (934-1044)||(23185593-23185703)
chr8 (1003-1048)||(29692575-29692620)
chr8 (641-686)||(32564505-32564550)
chr8 (974-1047)||(16682097-16682172)
chr8 (932-1043)||(18121980-18122094)
chr8 (1003-1047)||(20256356-20256400)
chr8 (1003-1047)||(20256441-20256485)
chr8 (932-1044)||(31445292-31445406)
chr8 (630-685)||(3870767-3870822)
chr8 (931-982)||(9767963-9768013)
chr8 (928-959)||(17442787-17442818)
chr8 (641-684)||(32565652-32565695)
chr8 (749-848)||(43040113-43040212)
chr8 (969-1044)||(16206458-16206535)
chr8 (631-685)||(17864723-17864777)
chr8 (932-982)||(43638954-43639004)
chr8 (1003-1044)||(17442694-17442735)
chr8 (954-1044)||(17796630-17796721)
chr8 (932-984)||(43773308-43773360)
[»] chr2 (42 HSPs)
chr2 (1-684)||(35298556-35299239)
chr2 (536-685)||(35306022-35306171)
chr2 (932-1042)||(41122473-41122583)
chr2 (932-1044)||(23185123-23185233)
chr2 (932-1044)||(23596386-23596496)
chr2 (617-685)||(31622099-31622167)
chr2 (932-1043)||(22271293-22271401)
chr2 (931-1044)||(24851463-24851578)
chr2 (932-1044)||(28702015-28702129)
chr2 (932-1044)||(40780504-40780618)
chr2 (969-1044)||(24724093-24724168)
chr2 (932-1044)||(24778525-24778640)
chr2 (934-1047)||(20569537-20569652)
chr2 (976-1044)||(26623262-26623330)
chr2 (616-684)||(31620525-31620593)
chr2 (617-685)||(36669149-36669217)
chr2 (931-1044)||(22455750-22455866)
chr2 (619-686)||(31621108-31621175)
chr2 (933-1044)||(25188600-25188711)
chr2 (534-684)||(40894782-40894932)
chr2 (932-1047)||(24575226-24575344)
chr2 (932-1044)||(39038431-39038545)
chr2 (932-1044)||(45087788-45087902)
chr2 (932-1047)||(17964091-17964208)
chr2 (932-1047)||(22257383-22257501)
chr2 (935-1047)||(25828352-25828466)
chr2 (932-1026)||(31328783-31328878)
chr2 (932-1026)||(31335504-31335599)
chr2 (630-681)||(4755043-4755094)
chr2 (931-1044)||(22188898-22189014)
chr2 (619-686)||(36666791-36666858)
chr2 (932-1044)||(28551712-28551825)
chr2 (641-686)||(4753526-4753571)
chr2 (926-1002)||(19539641-19539717)
chr2 (995-1044)||(24838350-24838399)
chr2 (963-1044)||(10010541-10010624)
chr2 (932-1044)||(21537978-21538092)
chr2 (932-982)||(22316797-22316846)
chr2 (932-995)||(27294685-27294749)
chr2 (932-982)||(38040801-38040851)
chr2 (924-982)||(22763021-22763080)
chr2 (932-996)||(22782472-22782536)
[»] chr7 (55 HSPs)
chr7 (133-602)||(33061639-33062091)
chr7 (720-874)||(37748591-37748745)
chr7 (932-1042)||(10884021-10884133)
chr7 (536-683)||(40601733-40601882)
chr7 (934-1044)||(13261524-13261636)
chr7 (931-1044)||(19237910-19238023)
chr7 (932-1044)||(13902504-13902616)
chr7 (932-1044)||(4493739-4493853)
chr7 (932-1044)||(33604099-33604213)
chr7 (932-1044)||(21211427-21211542)
chr7 (565-684)||(45291895-45292014)
chr7 (932-1044)||(39285390-39285503)
chr7 (932-1044)||(5001711-5001826)
chr7 (936-1047)||(16315383-16315497)
chr7 (932-1044)||(12367606-12367720)
chr7 (932-1044)||(13259292-13259406)
chr7 (536-685)||(40600710-40600861)
chr7 (932-1044)||(14186880-14186995)
chr7 (622-684)||(38516620-38516682)
chr7 (980-1044)||(13424766-13424831)
chr7 (932-1044)||(11792065-11792179)
chr7 (954-1047)||(13731522-13731616)
chr7 (932-1044)||(21284223-21284337)
chr7 (932-1044)||(29936194-29936301)
chr7 (985-1044)||(9099107-9099166)
chr7 (985-1044)||(9099921-9099980)
chr7 (930-1037)||(16557466-16557575)
chr7 (930-1037)||(16608087-16608196)
chr7 (641-684)||(45296096-45296139)
chr7 (930-1044)||(21691615-21691733)
chr7 (932-995)||(30025128-30025192)
chr7 (932-1047)||(11318589-11318707)
chr7 (932-1044)||(15705343-15705458)
chr7 (932-1044)||(13027800-13027914)
chr7 (954-1047)||(13645669-13645763)
chr7 (550-682)||(42537718-42537850)
chr7 (932-1044)||(2499223-2499337)
chr7 (928-995)||(8182149-8182215)
chr7 (932-1044)||(13138774-13138889)
chr7 (925-995)||(1292240-1292311)
chr7 (976-1042)||(13302100-13302168)
chr7 (954-1044)||(13879361-13879452)
chr7 (974-1044)||(16317445-16317517)
chr7 (623-684)||(38517751-38517812)
chr7 (930-1044)||(22580103-22580220)
chr7 (928-1047)||(2914502-2914623)
chr7 (964-1044)||(28623202-28623284)
chr7 (995-1041)||(3921650-3921696)
chr7 (932-982)||(8932954-8933003)
chr7 (977-1048)||(9069000-9069073)
chr7 (976-1047)||(13681534-13681607)
chr7 (931-983)||(1559955-1560007)
chr7 (954-1044)||(14424525-14424616)
chr7 (954-1044)||(16546186-16546277)
chr7 (954-1044)||(16619385-16619476)
[»] chr3 (58 HSPs)
chr3 (536-684)||(18912548-18912696)
chr3 (554-684)||(18939784-18939915)
chr3 (932-1047)||(19889782-19889899)
chr3 (932-1042)||(12967511-12967622)
chr3 (931-1044)||(19250236-19250349)
chr3 (954-1044)||(26418569-26418658)
chr3 (986-1041)||(6252657-6252712)
chr3 (932-1042)||(14310877-14310987)
chr3 (932-1047)||(15902393-15902509)
chr3 (623-684)||(9099560-9099621)
chr3 (934-1044)||(14063890-14063999)
chr3 (936-1041)||(6174498-6174599)
chr3 (932-1044)||(23539073-23539185)
chr3 (932-1044)||(6089925-6090039)
chr3 (932-1044)||(14954607-14954721)
chr3 (932-1044)||(19885924-19886038)
chr3 (617-684)||(20997633-20997700)
chr3 (932-1044)||(29952283-29952400)
chr3 (932-1044)||(30001437-30001554)
chr3 (641-686)||(36164594-36164639)
chr3 (932-1044)||(12727082-12727196)
chr3 (932-1044)||(40799085-40799201)
chr3 (932-1044)||(8874971-8875086)
chr3 (932-1044)||(14393841-14393956)
chr3 (994-1044)||(20724298-20724348)
chr3 (932-1044)||(52282991-52283106)
chr3 (932-1039)||(17667566-17667676)
chr3 (932-1047)||(49643607-49643725)
chr3 (932-1044)||(1241921-1242035)
chr3 (976-1044)||(12221300-12221368)
chr3 (632-684)||(19801786-19801838)
chr3 (932-1044)||(49554356-49554470)
chr3 (933-1044)||(2560383-2560496)
chr3 (933-1044)||(16031701-16031814)
chr3 (932-995)||(22465377-22465439)
chr3 (932-1044)||(52919622-52919735)
chr3 (932-1042)||(12963934-12964046)
chr3 (932-1044)||(14968561-14968680)
chr3 (938-1044)||(17239775-17239883)
chr3 (936-1044)||(21639128-21639237)
chr3 (616-684)||(11137912-11137980)
chr3 (954-1047)||(13939116-13939210)
chr3 (932-1044)||(22804867-22804980)
chr3 (623-683)||(37463680-37463740)
chr3 (641-685)||(37465006-37465050)
chr3 (931-1038)||(2025292-2025397)
chr3 (932-1044)||(11189191-11189304)
chr3 (641-684)||(36163383-36163426)
chr3 (926-982)||(38194117-38194174)
chr3 (932-1043)||(41494200-41494312)
chr3 (932-982)||(11073624-11073673)
chr3 (932-1044)||(29854607-29854721)
chr3 (932-982)||(41044900-41044950)
chr3 (931-964)||(16881443-16881476)
chr3 (930-982)||(17960803-17960855)
chr3 (930-982)||(19888135-19888187)
chr3 (932-1041)||(31302547-31302657)
chr3 (932-1044)||(38178491-38178606)
[»] chr6 (40 HSPs)
chr6 (930-1044)||(17304106-17304224)
chr6 (930-1048)||(15301411-15301531)
chr6 (932-1044)||(3680299-3680411)
chr6 (932-1044)||(13435080-13435194)
chr6 (964-1044)||(7762867-7762947)
chr6 (932-1047)||(13601362-13601479)
chr6 (932-1044)||(17380757-17380872)
chr6 (954-1044)||(19469849-19469938)
chr6 (622-686)||(9448765-9448829)
chr6 (938-1041)||(26941607-26941710)
chr6 (932-1043)||(19085327-19085440)
chr6 (930-1044)||(21624284-21624401)
chr6 (932-1044)||(32543458-32543572)
chr6 (536-606)||(227136-227206)
chr6 (932-1044)||(10631331-10631446)
chr6 (930-1044)||(14101284-14101400)
chr6 (932-1044)||(15532470-15532585)
chr6 (641-686)||(18193023-18193068)
chr6 (931-1044)||(22801338-22801452)
chr6 (543-686)||(226119-226262)
chr6 (641-684)||(11020406-11020449)
chr6 (932-1044)||(16876107-16876217)
chr6 (932-1044)||(19833829-19833942)
chr6 (932-1047)||(25593269-25593383)
chr6 (954-1044)||(19623205-19623296)
chr6 (930-1044)||(9717018-9717135)
chr6 (931-1044)||(16332923-16333038)
chr6 (934-1044)||(16528511-16528624)
chr6 (932-1032)||(19624971-19625073)
chr6 (986-1041)||(17926995-17927050)
chr6 (641-684)||(18191746-18191789)
chr6 (933-1044)||(24116013-24116127)
chr6 (954-1044)||(20113473-20113565)
chr6 (932-1044)||(21234350-21234465)
chr6 (623-684)||(9447607-9447668)
chr6 (926-982)||(32756750-32756806)
chr6 (645-685)||(30758894-30758934)
chr6 (955-1047)||(14732952-14733045)
chr6 (641-683)||(11020178-11020220)
chr6 (930-959)||(10972370-10972399)
[»] scaffold0598 (1 HSPs)
scaffold0598 (954-1044)||(2586-2675)
[»] scaffold0081 (1 HSPs)
scaffold0081 (932-1044)||(13191-13303)
[»] chr5 (25 HSPs)
chr5 (932-1039)||(21199846-21199953)
chr5 (934-1044)||(25097871-25097981)
chr5 (934-1044)||(25156963-25157073)
chr5 (616-683)||(16727813-16727880)
chr5 (932-1044)||(22000855-22000969)
chr5 (954-1044)||(21207636-21207726)
chr5 (932-1047)||(6513255-6513373)
chr5 (932-1044)||(7746524-7746639)
chr5 (932-1044)||(90261-90375)
chr5 (932-1044)||(31487403-31487517)
chr5 (932-1044)||(6498511-6498623)
chr5 (930-1044)||(19546358-19546471)
chr5 (932-1044)||(30116702-30116816)
chr5 (932-1044)||(3246291-3246403)
chr5 (932-1044)||(21076011-21076125)
chr5 (932-1044)||(21100578-21100692)
chr5 (938-1044)||(23413804-23413913)
chr5 (954-1044)||(11993107-11993197)
chr5 (931-1044)||(13546355-13546471)
chr5 (932-995)||(28465225-28465287)
chr5 (932-1044)||(33932460-33932576)
chr5 (931-1044)||(35932834-35932950)
chr5 (932-1044)||(37395362-37395476)
chr5 (932-983)||(26120710-26120760)
chr5 (653-684)||(38921455-38921486)
[»] chr1 (33 HSPs)
chr1 (616-686)||(36573960-36574030)
chr1 (616-684)||(26529508-26529576)
chr1 (932-1044)||(21192654-21192767)
chr1 (932-1044)||(17025772-17025884)
chr1 (932-1044)||(18614108-18614221)
chr1 (932-1044)||(12625318-12625430)
chr1 (616-684)||(26531083-26531151)
chr1 (619-686)||(26530500-26530567)
chr1 (932-1044)||(7308986-7309099)
chr1 (616-686)||(36575530-36575600)
chr1 (619-686)||(36574954-36575021)
chr1 (932-1047)||(22202648-22202764)
chr1 (932-1044)||(30892260-30892374)
chr1 (528-684)||(49919606-49919762)
chr1 (930-1044)||(14294052-14294166)
chr1 (932-1044)||(25449357-25449469)
chr1 (928-1044)||(22153017-22153135)
chr1 (986-1041)||(17017822-17017877)
chr1 (931-1044)||(21983792-21983908)
chr1 (930-1044)||(1577042-1577158)
chr1 (932-1042)||(12283590-12283700)
chr1 (932-1025)||(20959819-20959911)
chr1 (623-684)||(35062564-35062625)
chr1 (975-1047)||(22202526-22202600)
chr1 (964-1044)||(22428108-22428190)
chr1 (932-1044)||(2833856-2833965)
chr1 (930-964)||(22637456-22637490)
chr1 (937-1047)||(33257135-33257247)
chr1 (937-1047)||(33277307-33277419)
chr1 (932-982)||(39194924-39194974)
chr1 (685-723)||(40908503-40908541)
chr1 (995-1044)||(20908689-20908738)
chr1 (942-1044)||(38281569-38281672)
[»] scaffold0113 (1 HSPs)
scaffold0113 (941-1044)||(2403-2506)
[»] scaffold0025 (1 HSPs)
scaffold0025 (940-1039)||(73736-73835)
[»] scaffold1747 (1 HSPs)
scaffold1747 (932-1016)||(517-602)
[»] scaffold1745 (1 HSPs)
scaffold1745 (932-1016)||(809-894)
[»] scaffold0028 (2 HSPs)
scaffold0028 (932-1036)||(80560-80664)
scaffold0028 (932-1044)||(24576-24689)
[»] scaffold0364 (1 HSPs)
scaffold0364 (934-1044)||(5372-5483)
[»] scaffold1657 (1 HSPs)
scaffold1657 (932-1041)||(1014-1123)
[»] scaffold0004 (3 HSPs)
scaffold0004 (931-1034)||(245064-245167)
scaffold0004 (932-1047)||(378348-378466)
scaffold0004 (932-1044)||(210603-210715)
[»] scaffold0859 (1 HSPs)
scaffold0859 (929-1044)||(2163-2280)
[»] scaffold0115 (4 HSPs)
scaffold0115 (549-684)||(4336-4471)
scaffold0115 (549-684)||(12076-12211)
scaffold0115 (528-684)||(5985-6141)
scaffold0115 (528-684)||(13725-13881)
[»] scaffold0035 (3 HSPs)
scaffold0035 (932-1040)||(28976-29079)
scaffold0035 (934-1042)||(20267-20376)
scaffold0035 (932-1044)||(110392-110509)
[»] scaffold0567 (1 HSPs)
scaffold0567 (932-1044)||(9098-9209)
[»] scaffold0210 (1 HSPs)
scaffold0210 (932-1044)||(817-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (938-1044)||(25630-25739)
[»] scaffold0439 (1 HSPs)
scaffold0439 (932-1044)||(7509-7623)
[»] scaffold0040 (1 HSPs)
scaffold0040 (932-1044)||(2870-2987)
[»] scaffold0471 (1 HSPs)
scaffold0471 (931-1047)||(2650-2767)
[»] scaffold0273 (1 HSPs)
scaffold0273 (932-1043)||(4887-4998)
[»] scaffold0022 (2 HSPs)
scaffold0022 (932-1042)||(36626-36738)
scaffold0022 (932-1042)||(134686-134798)
[»] scaffold0315 (1 HSPs)
scaffold0315 (932-1040)||(7866-7976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (954-1042)||(2816-2905)
[»] scaffold0084 (2 HSPs)
scaffold0084 (932-1047)||(31786-31903)
scaffold0084 (932-1047)||(48512-48630)
[»] scaffold0026 (1 HSPs)
scaffold0026 (932-1047)||(7076-7193)
[»] scaffold0290 (1 HSPs)
scaffold0290 (932-1044)||(19454-19569)
[»] scaffold0064 (1 HSPs)
scaffold0064 (964-1044)||(44665-44745)
[»] scaffold0498 (1 HSPs)
scaffold0498 (932-1016)||(1037-1126)
[»] scaffold0479 (1 HSPs)
scaffold0479 (932-1044)||(9158-9277)
[»] scaffold0205 (1 HSPs)
scaffold0205 (930-1044)||(752-868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (938-1044)||(14317-14425)
[»] scaffold0116 (1 HSPs)
scaffold0116 (932-991)||(21790-21849)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1004-1047)||(14238-14281)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1004-1047)||(1280-1323)
[»] scaffold0005 (1 HSPs)
scaffold0005 (926-1017)||(211549-211643)
[»] scaffold1539 (1 HSPs)
scaffold1539 (932-982)||(1558-1608)
[»] scaffold0738 (1 HSPs)
scaffold0738 (932-982)||(5623-5673)
[»] scaffold0525 (1 HSPs)
scaffold0525 (932-982)||(7054-7103)
[»] scaffold0056 (1 HSPs)
scaffold0056 (932-995)||(26500-26564)
[»] scaffold0009 (1 HSPs)
scaffold0009 (995-1041)||(267977-268023)
[»] scaffold0267 (1 HSPs)
scaffold0267 (930-982)||(7178-7230)
[»] scaffold0193 (1 HSPs)
scaffold0193 (932-965)||(16956-16989)
[»] scaffold0072 (1 HSPs)
scaffold0072 (928-982)||(37556-37611)


Alignment Details
Target: chr4 (Bit Score: 547; Significance: 0; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 1 - 684
Target Start/End: Original strand, 41779621 - 41780314
Alignment:
Q  1 caaaatcaaagttgcttttgcttccatctgatcaaaacataaccataaacaccatta----------gacactcacgattatacacaaatcaaaccctaa 90  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||    
T  41779621 caaaatcaaagttgcctttgcttccatctgatcaaaacataaccataaacaccattaaaaaccattagacactcacggttatacacaaatcaaaccctaa 41779720  T
Q  91 gtgnnnnnnnnatgaaaaatgtcaacattatattattgtttggtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 190  Q
    |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41779721 gtgttttttt-atgaaaaatgtcaacattatattattgtttggtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 41779819  T
Q  191 ttttacacattttacatattaatcatatcttacaagtttatacacaaaactaccacaacaacaa-catgcaaagagcttaaagatgatgtttttattacc 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41779820 ttttacacattttacatattaatcatatcttacaagtttatacacaaaactaccacaacaacaagcatgcaaagagcttaaagatgatgtttttattacc 41779919  T
Q  290 ttaaacaagttgaagcaagaatccggagaagaagcacaatgacggttccagctgaagctcaaagacaaggttcactttgtttacttttagagaagctgaa 389  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41779920 ttaaacaagttgaagcaagaatccggagaagaagcacagcgacagttccagctgaagctcaaagacaaggttcactttttttacttttagagaagctgaa 41780019  T
Q  390 gaaacaaacataaacttttgagggggaaaatgacgttatttcccttttatatgagcttctactgatgttttccaatactttcattccagtcatgtctctt 489  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41780020 gaaacaaacataaacttttgaggggggaaatgacgttatttcccttttatatgagcttctactgatgttttccaatactttcattccagtcctgtctctt 41780119  T
Q  490 tatatcctcttttgccacgtaagcccatgatgtggagaaaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacgg 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41780120 tatatcctcttttgccacgtaagcccatgatgtggagaaaaaatggccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacgg 41780219  T
Q  590 aagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||| ||||        |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41780220 aagacactttcgaggagttttttttgcgttttcttgattcaggaacgtggttgatagcgaggtacactttcagagacccaaatgagggtttactc 41780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 536 - 684
Target Start/End: Complemental strand, 41774792 - 41774644
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggac 635  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  41774792 ccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcggggagttttttttgcgttttcttgattcagggac 41774693  T
Q  636 gtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41774692 gtggttgatagcgaggtacactttcagggacccaaatgagagtttactc 41774644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 15560463 - 15560577
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  15560463 tgaaggtgaaaaaaacacaagaaggggggttgaa-ttgtgtttgctttttctttgttttctcctaaactgaagtcactgttcagaacctaatagagttca 15560561  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||||||||||||||    
T  15560562 gcttctgaagtgatgt 15560577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 22089476 - 22089589
Alignment:
Q  930 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||||| |||||||||| || ||||  ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||    
T  22089476 tctgaaggtgagaaaaacacaagaagggggttgaa-ttgtgttaactttttcttcgttttattctactgaagtcactgatcagaagcagatagagttcag 22089574  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  22089575 cttctgaagtgatgt 22089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 932 - 1042
Target Start/End: Complemental strand, 41115728 - 41115618
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||||||||||| |||||||  |||| ||||  ||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  41115728 tgaaggtgagaaaaacacaagaagggggtttgaattgtgttaactttttcttcgttttctcctactgaagtcgctgatcagaagcagatagagttcagct 41115629  T
Q  1032 tctgaagtgat 1042  Q
    |||||||||||    
T  41115628 tctgaagtgat 41115618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 528 - 686
Target Start/End: Original strand, 8480853 - 8481011
Alignment:
Q  528 aaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgat 627  Q
    |||||||| ||||| ||||  ||||||| ||| |||||||||||||| |||||||||||||||||| ||||| ||||||        ||||||  |||||    
T  8480853 aaaaatggtcagatcagcacagttaacgatcagttaacgttttggatgggaatgactaacggaagagactttgggggagtttttggtgcgtttcattgat 8480952  T
Q  628 tcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
     ||||||||||  |||||||||| ||||||||||||||| |||||||| ||||| ||||    
T  8480953 ccagggacgtgactgatagcgagatacactttcagggactcaaatgagagtttattctt 8481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 938 - 1044
Target Start/End: Original strand, 6640891 - 6640997
Alignment:
Q  938 tgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctga 1036  Q
    ||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||| |||| |||||| || ||||||||| ||||||||||||||||||    
T  6640891 tgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcatacttaagtcattgatcagaagcagatagagttcagcttctga 6640989  T
Q  1037 agtgatgt 1044  Q
    ||||||||    
T  6640990 agtgatgt 6640997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 8686353 - 8686244
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||| |||||||||||| ||||| || ||||||||||||||| |||||||| |||||||||||||| ||||||||| || |||||| |||    
T  8686353 tgaaggtgagaaaa-cacaagaggggg-ttgaa-ttgtgtttgctttttcttcgttttctcttactgaagtcactgatcagaagcagattgagttctgct 8686257  T
Q  1032 tctgaagtgatgt 1044  Q
    | |||||||||||    
T  8686256 tttgaagtgatgt 8686244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 932 - 1028
Target Start/End: Original strand, 11914864 - 11914960
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||  |||| ||||| |  |||| ||||  ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  11914864 tgaaggtgagaaaaactaaagaagggggattgaattgtgttaactttttcttcgttttctcctactgaaatcactggtcagaagcaaatagagttca 11914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 44397403 - 44397516
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||| |||| |||||||||| || |||| ||||||||||  ||||||| ||  |||||  ||||| ||||||||| ||||||||| |    
T  44397403 tgaaggtgagaaaaacataagaagggggttgaa-ttgtgttggctttttcttctttttctcttaagctgaaaacactgatcagaagcagatagagttctg 44397501  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  44397502 cttctgaagtgatgt 44397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 623 - 685
Target Start/End: Complemental strand, 52189247 - 52189185
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    ||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  52189247 ttgatccagggatgtggctgatagcgaggtgcactttcagggacccaaatgagggtttactct 52189185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 955 - 1044
Target Start/End: Original strand, 11900325 - 11900413
Alignment:
Q  955 gggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||||| || |||| | ||||| || ||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  11900325 gggggttgaa-ttgtgttagtttttttttcgttttttcctactgaaatcactgttcagaagcagatagagttcagattctgaagtgatgt 11900413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 1048
Target Start/End: Complemental strand, 29681434 - 29681315
Alignment:
Q  930 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||  ||||||||||||||| |||||||| |  |||| |||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||| |    
T  29681434 tctgaaggtctgaaaaacacaagaggtgggttgaa-tagtgttagctttttcttcgttttctcctaagctgaaaacactgatcataagcaaatagagtac 29681336  T
Q  1028 agcttctgaagtgatgtccat 1048  Q
     |||||||||||||| |||||    
T  29681335 tgcttctgaagtgatttccat 29681315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 3792527 - 3792640
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||| ||||| |||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| | ||||||| |||||||||      
T  3792527 tgaaggtgagaaaaacgcaagacgggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgcttagaagcagatagagttcta 3792625  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  3792626 cttctgaagtgatgt 3792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 19611288 - 19611171
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| || |||| | |||||||| |||||||||||  ||| |  ||| | ||||||||| |||||||||     
T  19611288 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttttttcttcgttttctcctaaactgtaaacacagatcagaagcacatagagttct 19611190  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  19611189 gcttctgaagtgatttcca 19611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 22676475 - 22676362
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||||| || |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||      
T  22676475 tgaaggtgagaaaaacacaagaaggggggtg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttcta 22676377  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||| |||||||||||    
T  22676376 cttttgaagtgatgt 22676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 931 - 1044
Target Start/End: Original strand, 29120559 - 29120675
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||||  ||||||||||| || |||| ||||| ||||  ||||||||||  |||||  ||||| ||||||||| ||||||||    
T  29120559 ctgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttctcttctttttctcctaagctgaaaacactgatcagaagcagatagagtt 29120657  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  29120658 ctacttctgaagtgatgt 29120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 54679052 - 54679168
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||| ||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||| ||||| ||||||||    
T  54679052 tctgatggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcaaaagcagatagagtt 54679150  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  54679151 ctacttctgaagtgatgt 54679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 12599948 - 12600060
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||| |||||||||||| |||| ||||| |  |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||      
T  12599948 tgaatgtgagaaaaacataagaagggggattgaattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaataaagttcta 12600047  T
Q  1030 cttctgaagtgat 1042  Q
    |||||||||||||    
T  12600048 cttctgaagtgat 12600060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 680
Target Start/End: Original strand, 23545342 - 23545406
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggttt 680  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||||| |||| |||||||||||||    
T  23545342 cgttttcttgattcagagacgtgtctgatagcaaggtacactttcaaggactcaaatgagggttt 23545406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 561 - 683
Target Start/End: Complemental strand, 8479775 - 8479652
Alignment:
Q  561 ttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnn-gcgttttcttgattcagggacgtggttgatagcgaggtacacttt 659  Q
    ||||| |||||||| | |||||||||||||||| ||||| ||||||         ||||| | ||||| |||| |||||| ||||||| || ||||||||    
T  8479775 ttaacattttggatggaaatgactaacggaagagactttgggggaggtttttggtgcgttgtattgatccaggaacgtggctgatagcaagatacacttt 8479676  T
Q  660 cagggacccaaatgagggtttact 683  Q
    ||||||||||||||||| ||||||    
T  8479675 cagggacccaaatgaggatttact 8479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 24628814 - 24628699
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| |||||| || ||  ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  24628814 tgaaggtgagaaaaatacaagaaggaggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 24628716  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  24628715 tacttctgaagtgatgt 24628699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 993 - 1042
Target Start/End: Original strand, 17538921 - 17538970
Alignment:
Q  993 ctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 1042  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  17538921 ctactgaagtcactgatcagaagcagatagagttcagcttctaaagtgat 17538970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 641 - 686
Target Start/End: Complemental strand, 30829970 - 30829925
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||    
T  30829970 tgatagcgagcaacactttcagggacccaaatgagggtttactctt 30829925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 641 - 686
Target Start/End: Original strand, 52190387 - 52190432
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  52190387 tgatagcgagatgcactttcagggacccaaatgagggtttactctt 52190432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 623 - 671
Target Start/End: Complemental strand, 31409374 - 31409326
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaa 671  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  31409374 ttgatccaaggacgtggttgatagcgaggtgcactttcagggacccaaa 31409326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 23120732 - 23120848
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtc-actgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||| ||| |||||||| || |||| ||||||||||  ||||||||||  |||||    |||  |||||||||||||||||||     
T  23120732 tgaaggtgagaaaaacacaa-aggagggttgaa-ttgtgttagctttttcttcattttctcctaagctgaaaaagactaatcagaagcaaatagagttct 23120829  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  23120830 gcttctgaagtgatttcca 23120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 37436445 - 37436332
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||||| | ||||| || ||| ||||||||  ||||||||||   ||||  ||||| ||||||||| |||||||||      
T  37436445 tgaaggtgagaaaaacacaagaaggggggttaaattgtg-ttggtttttcttctttttctcctatgttgaaaacactgatcagaagcagatagagttcta 37436347  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||| |||||||||||    
T  37436346 cttatgaagtgatgt 37436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1011
Target Start/End: Complemental strand, 17788954 - 17788874
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttca 1011  Q
    ||||||||| |||||||||||| | |||  ||||| || |||||| |||||||| ||||||||||||| |||||||||||||    
T  17788954 tgaaggtgaaaaaaacacaagaagtgggagttgaa-ttgtgtttgttttttcttcgttttctcctacttaagtcactgttca 17788874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 23749715 - 23749833
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg----gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    |||||||||||||||||||||| ||||    | |  |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||| | |||||||    
T  23749715 tgaaggtgagaaaaacacaagaaggggaggggattgaattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagtagatagagt 23749814  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||||||||||    
T  23749815 tctacttctgaagtgatgt 23749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 1044
Target Start/End: Original strand, 15134915 - 15135026
Alignment:
Q  935 aggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    ||||||||||||||||||| ||||||||||| || |||| | | |||||| |||||||| ||   ||||  ||||| |||||||||||||||||||  ||    
T  15134915 aggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttatttcttcgttttctcttaagttgaaaacactgatcagaagcaaatagagttccact 15135013  T
Q  1032 tctgaagtgatgt 1044  Q
    ||| |||||||||    
T  15135014 tctaaagtgatgt 15135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 623 - 684
Target Start/End: Original strand, 31410610 - 31410671
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||| |||||  |||||||||||| |||||||||| ||| |||| |||||||||||    
T  31410610 ttgattcaggaacgtgtctgatagcgaggtgcactttcaggaacctaaataagggtttactc 31410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 14905242 - 14905127
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||| ||||||||||| | |||||| |  |||| |||| ||||||||||  ||||||||||  |||||  || || ||||||||| |||||||||     
T  14905242 tgaaggtgggaaaaacacaacaaggggggattgaattgtgttggctttttcttctttttctcctaagctgaaaacattgatcagaagcagatagagttct 14905143  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  14905142 acttctgaagtgatgt 14905127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 995
Target Start/End: Original strand, 40859900 - 40859963
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||||    
T  40859900 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttctttttctccta 40859963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 934 - 1044
Target Start/End: Original strand, 56033722 - 56033835
Alignment:
Q  934 aaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||  || |||||||| || |||| | ||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||      
T  56033722 aaggtgagaaaaacacaagaatggagggttgaa-ttgtgttggttttttcttctttttctcctaagctgaaaacacttatcagaagcagatagagttcta 56033820  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  56033821 cttctgaagtgatgt 56033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 994 - 1037
Target Start/End: Complemental strand, 10662038 - 10661995
Alignment:
Q  994 tactgaagtcactgttcagaagcaaatagagttcagcttctgaa 1037  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||    
T  10662038 tactgaagtcactgttgagaagcagatagagtccagcttctgaa 10661995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 994 - 1037
Target Start/End: Complemental strand, 10876183 - 10876140
Alignment:
Q  994 tactgaagtcactgttcagaagcaaatagagttcagcttctgaa 1037  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||    
T  10876183 tactgaagtcactgttgagaagcagatagagtccagcttctgaa 10876140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 1017
Target Start/End: Complemental strand, 14605829 - 14605735
Alignment:
Q  926 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagca 1017  Q
    ||||| ||||||||||||||||||||| ||||||| |  |||| |||| ||||||| || |||||||||||  |||||  ||||| |||||||||    
T  14605829 agaatttgaaggtgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaaacactgatcagaagca 14605735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 932 - 984
Target Start/End: Original strand, 20976646 - 20976699
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttcttt 984  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  20976646 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttgctttttcttt 20976699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 929 - 982
Target Start/End: Complemental strand, 31267630 - 31267577
Alignment:
Q  929 atctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  31267630 atctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 31267577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 3106329 - 3106218
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||| |||||||||||||| |||| ||||| || |||| ||||||||||  |||||||||| |||||    | ||||||||||| |||||||||  |    
T  3106329 tgaaggtaagaaaaacacaagaagggg-ttgaa-ttgtgttagctttttcttctttttctcctaactgaaaatgcagttcagaagcagatagagttctac 3106232  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||||||| |||||    
T  3106231 ttctgaagagatgt 3106218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 995 - 1044
Target Start/End: Original strand, 14357599 - 14357648
Alignment:
Q  995 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||| ||||||||||| |  ||||||||| ||||||||||||||||    
T  14357599 actgaagtgactgttcagaacctgatagagttcggcttctgaagtgatgt 14357648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 16631631 - 16631749
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||   |||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||| ||||||||||||||     
T  16631631 tgaaggtgagaaaaacacaagaagagggggttg-aattgtgttggttttttcttccttttctcctaagctgaaaacactgatcaaaagcaaatagagttt 16631729  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||||| || |||| ||||    
T  16631730 tgcttctaaaatgatttcca 16631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 543; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 1 - 684
Target Start/End: Original strand, 5014192 - 5014885
Alignment:
Q  1 caaaatcaaagttgcttttgcttccatctgatcaaaacataaccataaacaccatta----------gacactcacgattatacacaaatcaaaccctaa 90  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||    
T  5014192 caaaatcaaagttgcctttgcttccatctgatcaaaacataaccataaacaccattaaataccattagacactcacggttatacacaaatcaaaccctaa 5014291  T
Q  91 gtgnnnnnnnnatgaaaaatgtcaacattatattattgtttggtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 190  Q
    |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5014292 gtgttttttt-atgaaaaatgtcaacattatattattgtttggtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 5014390  T
Q  191 ttttacacattttacatattaatcatatcttacaagtttatacacaaaactaccacaacaacaa-catgcaaagagcttaaagatgatgtttttattacc 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5014391 ttttacacattttacatattaatcatatcttacaagtttatacacaaaactaccacaacaacaagcatgcaaagagcttaaagatgatgtttttattacc 5014490  T
Q  290 ttaaacaagttgaagcaagaatccggagaagaagcacaatgacggttccagctgaagctcaaagacaaggttcactttgtttacttttagagaagctgaa 389  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5014491 ttaaacaagttgaagcaagaatccggagaagaagcacagcgacagttccagctgaagctcaaagacaaggttcactttttttacttttagagaagctgaa 5014590  T
Q  390 gaaacaaacataaacttttgagggggaaaatgacgttatttcccttttatatgagcttctactgatgttttccaatactttcattccagtcatgtctctt 489  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5014591 gaaacaaacattaacttttgaggggggaaatgacgttatttcctttttatatgagcttctactgatgttttccaatactttcattccagtcttgtctctt 5014690  T
Q  490 tatatcctcttttgccacgtaagcccatgatgtggagaaaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacgg 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  5014691 tatatcctcttttgccacgtaagcccatgatgtggagaaaaaatggccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacgg 5014790  T
Q  590 aagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||| ||||        |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5014791 aagacactttcgaggagttttttttgcgttttcttgattcaaggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 5014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 536 - 684
Target Start/End: Complemental strand, 5005856 - 5005708
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggac 635  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||    
T  5005856 ccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcgaggagttttttttgcgttttcttgattcagggac 5005757  T
Q  636 gtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5005756 gtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 5005708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 934 - 1044
Target Start/End: Original strand, 18771889 - 18771997
Alignment:
Q  934 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    ||||||||||||||||| || |||||||||| || |||| ||||||||||  | |||||||||||||||||||||||||||||| |||||||||| ||||    
T  18771889 aaggtgagaaaaacaca-gaagggggttgaa-ttgtgttagctttttcttcatcttctcctactgaagtcactgttcagaagcacatagagttcaacttc 18771986  T
Q  1034 tgaagtgatgt 1044  Q
    |||| ||||||    
T  18771987 tgaattgatgt 18771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 43644073 - 43644185
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| ||||||| ||  |||| |||||||||| |||||| ||||||||| ||||||||||||    
T  43644073 tgaaggtgagaaaaacataagaaggggggttg-aattgtgttagcttttttttcattttttcctactgaattcactgatcagaagcagatagagttcagc 43644171  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  43644172 ttctgaagtgatgt 43644185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 17007500 - 17007617
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| |||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||     
T  17007500 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatatagttct 17007598  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  17007599 gcttctgaagtgatttcca 17007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 19706726 - 19706815
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  19706726 ggggggttgaa-ttgtgttagctttttcttcgttttctcctattgaagtcactgatcagaagcagatagagttcaacttctgaagtgatgt 19706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 30422392 - 30422277
Alignment:
Q  931 ctgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||| | ||||||||| || |||||||||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||    
T  30422392 ctgaaggtgagaaaaacacaagaagaggggttgaa-ttgtgtttgctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttc 30422294  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  30422293 tacttctgaagtgatgt 30422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 25163261 - 25163375
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||| |||||||     
T  25163261 tgaaggtgagaaaaacataagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaacagagttct 25163359  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||||||||||||||    
T  25163360 gcttctgaagtgatgt 25163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 19957299 - 19957185
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaag-tcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| |||| | |  |||| |||| |||||||||| ||||||||||||||||| |||||| ||||||||| ||| | |||||    
T  19957299 tgaaggtgagaaaaacacaagaaggggagattgaattgtgttagctttttcttcgttttctcctactgaagttcactgatcagaagcagataaatttcag 19957200  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||| |||||||||||    
T  19957199 cttttgaagtgatgt 19957185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 45539445 - 45539331
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  45539445 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttct 45539347  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  45539346 acttctgaagtgatgt 45539331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 17541450 - 17541333
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| || |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||||||| |||||     
T  17541450 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttttttcttcattttctcctaagctgaaaacactgatcagaagcaaatatagttct 17541352  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  17541351 gcttctgaagtgatttcca 17541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 623 - 683
Target Start/End: Original strand, 3872286 - 3872346
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttact 683  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  3872286 ttgatacagggacgtggctgatagcgaggtgcactttcagggacccaaacgagggtttact 3872346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 619 - 684
Target Start/End: Original strand, 12887721 - 12887786
Alignment:
Q  619 tttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||| ||||||  ||  |||| |||||||||||||||||||||||||||||||||||||||    
T  12887721 tttcttgatccagggatatgtctgatcgcgaggtacactttcagggacccaaatgagggtttactc 12887786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 15337015 - 15336934
Alignment:
Q  964 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15337015 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15336934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 15426080 - 15425999
Alignment:
Q  964 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15426080 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 15517384 - 15517303
Alignment:
Q  964 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15517384 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 17863527 - 17863466
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||| || ||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  17863527 ttgatccaaggatgtggctgatagcgaggtgcactttcagggacccaaatgagggtttactc 17863466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 22672968 - 22673080
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  |    
T  22672968 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttcttgtttttctcctaactgaaaatacagatcagaagcagatagagttctac 22673066  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||||||| |||||    
T  22673067 ttctgaagagatgt 22673080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 954 - 1047
Target Start/End: Complemental strand, 12758680 - 12758586
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |||||| ||||||| ||||    
T  12758680 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaaactgaaaacactgatcagaagcaaatagagttttgcttctaaagtgatttcca 12758586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 14991049 - 14990935
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||     
T  14991049 tgaaggtgagaaaaacacaagatcggggggttg-aattgtgttggctttttcttctttttctcctaactgaaaatacaggtcagaagcatatagagttct 14990951  T
Q  1029 gcttctgaagtgatgt 1044  Q
     ||||||||| |||||    
T  14990950 acttctgaagagatgt 14990935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 954 - 1047
Target Start/End: Original strand, 19153237 - 19153331
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||||| || |||| |||| ||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |||||||||||||| ||||    
T  19153237 ggggggttgaa-ttgtgttagcttattcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 19153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 931 - 1047
Target Start/End: Original strand, 36104533 - 36104651
Alignment:
Q  931 ctgaaggtgagaaaa-acacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||  ||| | ||||||||| || ||||||    
T  36104533 ctgaaggtgagaaaaaacacaagaaggggggttg-aattgtgttggctttttcttcattttctcctaactgaaaacacagatcagaagcagattgagttc 36104631  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
      ||||||||| ||||||||    
T  36104632 tacttctgaagagatgtcca 36104651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 618 - 684
Target Start/End: Original strand, 12888239 - 12888305
Alignment:
Q  618 ttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||   ||||||||  ||||||||||||||| |||||||||| ||||||||| |||||||    
T  12888239 ttttcttgatcttgggacgtgtctgatagcgaggtacaatttcagggactcaaatgaggatttactc 12888305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 934 - 1044
Target Start/End: Complemental strand, 23185703 - 23185593
Alignment:
Q  934 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||||||| |||||||||| |||| |||| | ||||||||  |||||| |||  |||||  ||||| ||||||||| |||||||||  ||    
T  23185703 aaggtgagaaaaacacaa-aggggggttg-aattgtgttggttttttcttctttttcttctaagctgaaaacactgatcagaagcagatagagttctact 23185606  T
Q  1032 tctgaagtgatgt 1044  Q
    ||||||| |||||    
T  23185605 tctgaagcgatgt 23185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1003 - 1048
Target Start/End: Original strand, 29692575 - 29692620
Alignment:
Q  1003 cactgttcagaagcaaatagagttcagcttctgaagtgatgtccat 1048  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||    
T  29692575 cactgatcagaagcaaatagagttctgcttctgaagtgatttccat 29692620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 641 - 686
Target Start/End: Complemental strand, 32564550 - 32564505
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  32564550 tgatagcgagggacactttcaaggacccaaatgagggtttattctt 32564505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 974 - 1047
Target Start/End: Complemental strand, 16682172 - 16682097
Alignment:
Q  974 gctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    |||||||||| |||||||||||  |||||  || || ||||||||||||| ||||| |||||||||||||| ||||    
T  16682172 gctttttcttcgttttctcctaagctgaaaacaatgatcagaagcaaatatagttcggcttctgaagtgatttcca 16682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 1043
Target Start/End: Complemental strand, 18122094 - 18121980
Alignment:
Q  932 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||   |||||  || || ||||||||| |||||||||    
T  18122094 tgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctccttagctgaaaacattgatcagaagcagatagagttc 18121996  T
Q  1028 agcttctgaagtgatg 1043  Q
      ||||||||||||||    
T  18121995 tacttctgaagtgatg 18121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1003 - 1047
Target Start/End: Complemental strand, 20256400 - 20256356
Alignment:
Q  1003 cactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  20256400 cactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1003 - 1047
Target Start/End: Complemental strand, 20256485 - 20256441
Alignment:
Q  1003 cactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  20256485 cactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 31445292 - 31445406
Alignment:
Q  932 tgaaggtgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||| ||||||||||||  |||||||||| || |||| | ||||| ||| |||| |||||  |||||  ||||| ||||||||| |||||||||     
T  31445292 tgaaggtgacaaaaacacaagaatgggggttgaa-ttgtgttggtttttttttttttttttcctaagctgaaaacactgatcagaagcagatagagttct 31445390  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  31445391 acttctgaagtgatgt 31445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 685
Target Start/End: Complemental strand, 3870822 - 3870767
Alignment:
Q  630 agggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    |||||||||| |||||||||  | || |||||||||||||| ||||||||||||||    
T  3870822 agggacgtggctgatagcgaaatgcattttcagggacccaagtgagggtttactct 3870767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 931 - 982
Target Start/End: Complemental strand, 9768013 - 9767963
Alignment:
Q  931 ctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  9768013 ctgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 9767963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 928 - 959
Target Start/End: Complemental strand, 17442818 - 17442787
Alignment:
Q  928 aatctgaaggtgagaaaaacacaagagggggg 959  Q
    ||||||||||||||||||||||||||||||||    
T  17442818 aatctgaaggtgagaaaaacacaagagggggg 17442787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 641 - 684
Target Start/End: Original strand, 32565652 - 32565695
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  32565652 tgatagcgagggacactttcagggacctaaacgagggtttactc 32565695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 749 - 848
Target Start/End: Complemental strand, 43040212 - 43040113
Alignment:
Q  749 ttcttcttctttggtttctgaatcagtttcttggttttcattccgtttcccttttatctctaagtttctctcatgtttacatctttcttctttagctcct 848  Q
    |||||||||||  ||||||||| ||||||| || ||||||||  ||||||| |  ||||| | ||||||||| || | || ||||||||||| |||||||    
T  43040212 ttcttcttcttcagtttctgaaccagtttcgtgattttcattatgtttcccctccatctccatgtttctctcctgatcacttctttcttcttcagctcct 43040113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 969 - 1044
Target Start/End: Original strand, 16206458 - 16206535
Alignment:
Q  969 tgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  16206458 tgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 16206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 631 - 685
Target Start/End: Original strand, 17864723 - 17864777
Alignment:
Q  631 gggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    |||| |||| |||||||||| | |||||||| ||| |||||||||||||||||||    
T  17864723 gggatgtggctgatagcgagatgcactttcaaggaaccaaatgagggtttactct 17864777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 43638954 - 43639004
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| |||| |||||||||    
T  43638954 tgaaggtgagaaaaacacaagagggggggttgaattgtgttagctttttct 43639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1003 - 1044
Target Start/End: Complemental strand, 17442735 - 17442694
Alignment:
Q  1003 cactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||| |||||||||||||||||||  |||||||||||||||    
T  17442735 cactgatcagaagcaaatagagttctacttctgaagtgatgt 17442694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 17796630 - 17796721
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||||||||   |||||||||||||||    
T  17796630 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 17796721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 984
Target Start/End: Original strand, 43773308 - 43773360
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttcttt 984  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||||    
T  43773308 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttt 43773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 467; Significance: 0; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 1 - 684
Target Start/End: Complemental strand, 35299239 - 35298556
Alignment:
Q  1 caaaatcaaagttgcttttgcttccatctgatcaaaacataaccataaacaccatta----------gacactcacgattatacacaaatcaaaccctaa 90  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||    
T  35299239 caaaatcaaagttgcctttgcttccatctgatcaaaacataaccataaacaccattaaacaccattagacactcacggttatacacaaatcaaaccctaa 35299140  T
Q  91 gtgnnnnnnnnatgaaaaatgtcaacattatattattgtttggtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 190  Q
    |||        |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35299139 gtgtttttt--atgaaaaatgtcaagattatataattgttttgtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccacttta 35299042  T
Q  191 ttttacacattttacatattaatcatatcttacaagtttatacacaaaactaccacaacaacaacatgcaaagagcttaaagatgatgtttttattacct 290  Q
    |||||||         |||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  35299041 ttttaca---------tattaatcatatcttacaagtttacacacaaaacaaccacaacaacagcatgcaaagagcttaaagattatatttttattacct 35298951  T
Q  291 taaacaagttgaagcaagaatccggagaagaagcacaatgacggttccagctgaagctcaaagacaaggttcactttgtttacttttagagaagctgaag 390  Q
    ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35298950 taaacaagttgaagcaagattcatgagaagaagcacaacgacggttccagctgaagctcaaagacaaggttcactttgtttacttttagagaagctgaag 35298851  T
Q  391 aaacaaacataaacttttgagggggaaaatgacgttatttcccttttatatgagcttct-actgatgttttccaatactttcattccagtcatgtctctt 489  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  35298850 aaacaaacataaacttttgaggggggaaatgacgttatttcccttttatatgagcttgtaagtgatgttttccaatactttcattccagtcatgtctctt 35298751  T
Q  490 tatatcctcttttgccacgtaagcccatgatgtggagaaaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacgg 589  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||     
T  35298750 tatatcctcttttgccacgtaagcccatgaagtggagaaaaaatggccagatcagcaatgttaacgctcagttaacgttttggatgggaatgactaacga 35298651  T
Q  590 aagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35298650 aagagactttcggggagttttttttgcgttttcttgattcagggacgtggttgatagcgaggtacactttcaggaacccaaatgagggtttactc 35298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 536 - 685
Target Start/End: Original strand, 35306022 - 35306171
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggac 635  Q
    |||||| |||| |||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||||||||         ||||||||||||||||||||    
T  35306022 ccagatcagcaatgttaacgctcagttaacgttttggatgagaatgactaacagaagagactttcggggagtttttttttcgttttcttgattcagggac 35306121  T
Q  636 gtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
     || |||||||||||||||||||||||||||| |||||||||||||||||    
T  35306122 atgtttgatagcgaggtacactttcagggacctaaatgagggtttactct 35306171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 932 - 1042
Target Start/End: Complemental strand, 41122583 - 41122473
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| || |||||||| || ||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  41122583 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgtttactttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcagc 41122485  T
Q  1031 ttctgaagtgat 1042  Q
    ||||||||||||    
T  41122484 ttctgaagtgat 41122473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 23185233 - 23185123
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    ||||||| ||||||||||||| ||||||||||| || |||| ||||||||||  ||||||||||||||||||| || ||||||||| |||||||||| ||    
T  23185233 tgaaggtaagaaaaacacaag-ggggggttgaa-ttgtgttagctttttcttctttttctcctactgaagtcattgatcagaagcagatagagttcaact 23185136  T
Q  1032 tctgaagtgatgt 1044  Q
    |||||||||||||    
T  23185135 tctgaagtgatgt 23185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 23596496 - 23596386
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    ||||||| ||||||||||||| ||||||||||| || |||| ||||||||||  ||||||||||||||||||| || ||||||||| |||||||||| ||    
T  23596496 tgaaggtaagaaaaacacaag-ggggggttgaa-ttgtgttagctttttcttctttttctcctactgaagtcattgatcagaagcagatagagttcaact 23596399  T
Q  1032 tctgaagtgatgt 1044  Q
    |||||||||||||    
T  23596398 tctgaagtgatgt 23596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 617 - 685
Target Start/End: Original strand, 31622099 - 31622167
Alignment:
Q  617 gttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  31622099 gttttcttgattcagggacgtggttgataacgaggtacactttcagggacccaaataagggtttactct 31622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1043
Target Start/End: Original strand, 22271293 - 22271401
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    ||||||||||||||||| |   |||||| |  |||| ||||| ||||||||| | ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  22271293 tgaaggtgagaaaaacata---ggggggattgaattgtgtttactttttcttcgatttctcctactgaagtcactgatcataagcagatagagttcagct 22271389  T
Q  1032 tctgaagtgatg 1043  Q
    ||||||||||||    
T  22271390 tctgaagtgatg 22271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 24851578 - 24851463
Alignment:
Q  931 ctgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||| || |||||||| || ||||||||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  24851578 ctgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 24851480  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  24851479 tacttctgaagtgatgt 24851463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 28702129 - 28702015
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||     
T  28702129 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttct 28702031  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  28702030 acttctgaagtgatgt 28702015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 40780504 - 40780618
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| || |||||||| || |||| | |||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  40780504 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttct 40780602  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||||||||||||||    
T  40780603 gcttctgaagtgatgt 40780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 969 - 1044
Target Start/End: Original strand, 24724093 - 24724168
Alignment:
Q  969 tgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||| ||||||||| |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||    
T  24724093 tgttttctttttcttcgttttctcctactgaaatcattggtcagaagcagatagagttcagcttctgaagtgatgt 24724168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 24778525 - 24778640
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||||||||||| || |||| |||||||||| |||| ||||||  |||||  ||||| ||||||||||||||||||     
T  24778525 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttcgtttactcctaagctgaaaacactgatcagaagcaaatagagtta 24778623  T
Q  1028 agcttctgaagtgatgt 1044  Q
     ||||||||||||||||    
T  24778624 tgcttctgaagtgatgt 24778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 934 - 1047
Target Start/End: Complemental strand, 20569652 - 20569537
Alignment:
Q  934 aaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||| ||||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  ||    
T  20569652 aaggtgagaaaaacacaagaaggggggttgaa-ttgtgttaactttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatgc 20569554  T
Q  1031 ttctgaagtgatgtcca 1047  Q
    |||||||||||| ||||    
T  20569553 ttctgaagtgatttcca 20569537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 976 - 1044
Target Start/End: Complemental strand, 26623330 - 26623262
Alignment:
Q  976 tttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  26623330 tttttcttcgttttctcctacttaagtcactgttcagaagcagatagaattcaccttctgaagtgatgt 26623262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 684
Target Start/End: Complemental strand, 31620593 - 31620525
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||||||| ||||||   |||||||||||||||||||||||||| |||||||||||||||||    
T  31620593 cgttttcttgattcaaggacgtatctgatagcgaggtacactttcagggactcaaatgagggtttactc 31620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 617 - 685
Target Start/End: Original strand, 36669149 - 36669217
Alignment:
Q  617 gttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||| |||||| ||||||||||||    
T  36669149 gttttcttgattcagggacgtggctgatagcgaggtgcactttcatggatccaaattagggtttactct 36669217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 22455866 - 22455750
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||||  ||||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| ||||||||| ||||||||    
T  22455866 ctgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctcaaaacactgatcagaagcagatagagtt 22455768  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  22455767 ctacttctgaagtgatgt 22455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 619 - 686
Target Start/End: Original strand, 31621108 - 31621175
Alignment:
Q  619 tttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||| ||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||    
T  31621108 tttcttgatccagggacatgtttgatagcgaggtacacttttagggacccaaatgaaggtttactctt 31621175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 933 - 1044
Target Start/End: Original strand, 25188600 - 25188711
Alignment:
Q  933 gaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||||||||| ||||||||||||| |||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||  |    
T  25188600 gaaggtgagaaaa-cacaagagggggggtgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttccac 25188697  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  25188698 ttctgaagtgatgt 25188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 40894782 - 40894932
Alignment:
Q  534 ggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcaggg 633  Q
    |||||||||||||  |||||||| || |||||||||||||   ||||||||||||||| | || || ||||||         |||||  ||||| |||||    
T  40894782 ggccagattagcatagttaacgcccagttaacgttttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccaggg 40894881  T
Q  634 acgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||   ||||||||||||||||||| ||||| ||||||||||||||||||    
T  40894882 acgtacctgatagcgaggtacacttttagggatccaaatgagggtttactc 40894932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 24575226 - 24575344
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  |  |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||||||||||||     
T  24575226 tgaaggtgagaaaaacacaagaatgaagggttgaa-ttgtgttagctttttcttcattttctcctaagctgaaaacactgatcagaagcaaatagagttt 24575324  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||||||||||||| ||||    
T  24575325 tgcttctgaagtgatttcca 24575344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 39038545 - 39038431
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||| |||||| |||| |||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| ||||||||      
T  39038545 tgaaggtgagaaaaaaacaagaaggggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttat 39038447  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  39038446 acttctgaagtgatgt 39038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 45087902 - 45087788
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| ||      
T  45087902 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagatttat 45087804  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  45087803 acttctgaagtgatgt 45087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 17964208 - 17964091
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||| |||| ||||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||| || ||||||||||||     
T  17964208 tgaaggtgagaaaaacaaaagaaggggggttgaa-ttgtgttaactttttcttcgttttctcctaagctgaaaacactgatcataaacaaatagagttct 17964110  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||| ||||| ||||    
T  17964109 gcttctgaggtgatttcca 17964091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 22257383 - 22257501
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| |||||| |  |||| |||| ||||||||||  |||||||| |  |||||  ||||  ||||||||||||||||||      
T  22257383 tgaaggtgagaaaaacacaagaagggggggttcaattgtgttagctttttcttcattttctccaaagctgaaaacacttatcagaagcaaatagagttat 22257482  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  22257483 gcttctgaagtgatttcca 22257501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 935 - 1047
Target Start/End: Original strand, 25828352 - 25828466
Alignment:
Q  935 aggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||   | ||  ||||| ||||||||||||||| ||  |||    
T  25828352 aggtgagaaaaacacaagaaggggggttg-aattatgttagctttttcttcgttttctcctaaggtaaaaacactgatcagaagcaaatagatttatgct 25828450  T
Q  1032 tctgaagtgatgtcca 1047  Q
    ||| ||||||| ||||    
T  25828451 tctaaagtgatttcca 25828466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1026
Target Start/End: Complemental strand, 31328878 - 31328783
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||  |||||||||| |||||  ||||||| ||||||| ||| ||||    
T  31328878 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttctttttctcctatctgaaaacactgtttagaagcagataaagtt 31328783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1026
Target Start/End: Complemental strand, 31335599 - 31335504
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||  |||||||||| |||||  ||||||| ||||||| ||| ||||    
T  31335599 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttctttttctcctatctgaaaacactgtttagaagcagataaagtt 31335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 4755043 - 4755094
Alignment:
Q  630 agggacgtggttgatagcgaggtacactttcagggacccaaatgagggttta 681  Q
    |||||||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  4755043 agggacgtgtctgatagcgagggacactttcagagacccaaatgagggttta 4755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 22189014 - 22188898
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||||  ||||| ||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| ||| ||||    
T  22189014 ctgaaggtgagaaaaacacaagaacgggggattg-aattgtgttggttttttcttctttttctcctatgctgaaaacactgatcagaagcagatatagtt 22188916  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  22188915 ctacttctgaagtgatgt 22188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 686
Target Start/End: Original strand, 36666791 - 36666858
Alignment:
Q  619 tttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||| ||||||| |  |||||||||||||||||||| |||||||||||| | | |||||||||    
T  36666791 tttcttgatccagggacatatttgatagcgaggtacacttttagggacccaaataaagctttactctt 36666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 28551825 - 28551712
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||| | ||||||    | ||||||||||| |||||||||      
T  28551825 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttctttttctcataactgaaaatgcagttcagaagcagatagagttcta 28551727  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||||||||| |||||    
T  28551726 cttctgaagagatgt 28551712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 641 - 686
Target Start/End: Complemental strand, 4753571 - 4753526
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  4753571 tgatagcgagagacactttcagggacccaaacgagggtttactctt 4753526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 926 - 1002
Target Start/End: Original strand, 19539641 - 19539717
Alignment:
Q  926 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagt 1002  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  |||||| || |||||||    
T  19539641 agaatatgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcattttctacttctgaagt 19539717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 995 - 1044
Target Start/End: Original strand, 24838350 - 24838399
Alignment:
Q  995 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  24838350 actgaagtcactattcagaacctgatagagttcagcttctgaagtgatgt 24838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 963 - 1044
Target Start/End: Complemental strand, 10010624 - 10010541
Alignment:
Q  963 aaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||| |||| | ||||| || |||||||||||  |||||  ||||| ||||||||||||||||||| |||||| |||||||||    
T  10010624 aaattgtgttagtttttttttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctaaagtgatgt 10010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21538092 - 21537978
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||| |||||| ||  | |  |||| ||||||||||||||| |||||||| ||  |||||  || || | ||||||| |||||||||      
T  21538092 tgaaggtgagaaaaatacaagaaggaagattgaattgtgtttgctttttcttcgttttctcttaagctgaaaacattgattagaagcagatagagttcta 21537993  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  21537992 cttctgaagtgatgt 21537978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 22316797 - 22316846
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  22316797 tgaaggtgagaaaaacacaagaagggggttg-aattctgttagctttttct 22316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 995
Target Start/End: Original strand, 27294685 - 27294749
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| | |||||||| |||||||||||    
T  27294685 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttagttttttcttcgttttctccta 27294749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Complemental strand, 38040851 - 38040801
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  38040851 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 38040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 924 - 982
Target Start/End: Original strand, 22763021 - 22763080
Alignment:
Q  924 gaagaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 982  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  22763021 gaagattctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 22763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 996
Target Start/End: Complemental strand, 22782536 - 22782472
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac 996  Q
    ||||||||| |||||||||||| ||||||||||| || |||| ||||||||||  |||||||||||    
T  22782536 tgaaggtgataaaaacacaagaaggggggttgaa-ttgtgttagctttttcttctttttctcctac 22782472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 133 - 602
Target Start/End: Complemental strand, 33062091 - 33061639
Alignment:
Q  133 gtacaataaactacaataaataatgttcaaagctaatcatcttcatattaccactttattttacacattttacatattaatcatatcttacaagtttata 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||    
T  33062091 gtacaataaactacaataaataattttcaaagctaatcatcttcatattaacactttattttacacatt---------aatcatatcttacaagtttata 33062001  T
Q  233 cacaaaactaccacaacaacaacatgcaaagagcttaaagatgatgtttttattaccttaaacaagttgaagcaagaatccggagaagaagcacaatgac 332  Q
    |||||           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||| |||||||||  |||    
T  33062000 cacaa-----------caacagcatgcaaagagcttaaaaatgatgtttttattaccttaaacaagttgaagcaagattactgagcagaagcacatcgac 33061912  T
Q  333 ggttccag-ctgaagctcaaagacaagg-ttcactttgtttacttttagagaagctgaagaaacaaacataaacttttgagggggaaaatgacgttattt 430  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  33061911 ggttccaggcagaagctcaaagacaagggttcactttgtttacttttagagaagctaaagaaacaaacataaacttttgaggggggaaatgacgttattt 33061812  T
Q  431 cccttttatatgagcttctac-tgatgttttccaatactttcattccagtcatgtctctttatatcctcttttgccacgtaagcccatgatgtggagaaa 529  Q
    ||||||||||||||||| ||  ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  33061811 cccttttatatgagcttgtaagtgatgttttccaatagtttcattccagttctgtctctttatatcctattttgccacgtaagcccatgaagtggagaaa 33061712  T
Q  530 aaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcgg 602  Q
    |||||||||||| |||| |||||| || || |||||||||||||| |||||||||||||||||| ||||||||    
T  33061711 aaatggccagatcagcaatgttaatgcccagttaacgttttggataggaatgactaacggaagagactttcgg 33061639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 720 - 874
Target Start/End: Original strand, 37748591 - 37748745
Alignment:
Q  720 tatgaacaagaataaatggttaaaccttgttcttcttctttggtttctgaatcagtttcttggttttcattccgtttcccttttatctctaagtttctct 819  Q
    |||||||||||||||| | || |||||||||||||||||| |||||||||| |||||||||| ||||||||  |||| || | |||||| | ||||||||    
T  37748591 tatgaacaagaataaacgttttaaccttgttcttcttcttcggtttctgaaccagtttcttgattttcattatgttttccctctatctccatgtttctct 37748690  T
Q  820 catgtttacatctttcttctttagctcctctttgagctttgttcaaaacagctcc 874  Q
    | || | || ||||||||||| |||||||  | ||||||||||  ||||||||||    
T  37748691 cttgatcacttctttcttcttcagctccttgtagagctttgtttgaaacagctcc 37748745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 932 - 1042
Target Start/End: Complemental strand, 10884133 - 10884021
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||  |||||  ||||| ||||||||||||||||||      
T  10884133 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagctttttctttgttttctcctaagctgaaaacactgatcagaagcaaatagagttat 10884035  T
Q  1029 gcttctgaagtgat 1042  Q
    ||||||||||||||    
T  10884034 gcttctgaagtgat 10884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 536 - 683
Target Start/End: Original strand, 40601733 - 40601882
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggag--nnnnnnnngcgttttcttgattcaggg 633  Q
    |||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||          |||||| |||| |  ||||    
T  40601733 ccagatcagcagagttaacgctcagttaacgttttggatgggaatgactaacggaagagactttcgaggagttttttttttgcgtttccttgttctaggg 40601832  T
Q  634 acgtggttgatagcgaggtacactttcagggacccaaatgagggtttact 683  Q
    | |||  ||||||||||| |||||||||||||||||||||||||||||||    
T  40601833 atgtgcctgatagcgaggcacactttcagggacccaaatgagggtttact 40601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 934 - 1044
Target Start/End: Complemental strand, 13261636 - 13261524
Alignment:
Q  934 aaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||  |||||  || || ||||||||||||||||||| ||    
T  13261636 aaggtgagaaaaacacaagaaggggggttgaa-ttgtgttttctttttcttcgttttctcctaagctgaacacattgatcagaagcaaatagagttctgc 13261538  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  13261537 ttctgaagtgatgt 13261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 19238023 - 19237910
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||| |||| ||||||||||| || ||||| |||||||||  ||||||| |||||||||||||  | | ||||||||||||||||     
T  19238023 ctgaaggtgagaaaaacaaaagaaggggggttgaa-ttgtgttttctttttcttcattttctcttactgaagtcactagttataagcaaatagagttcaa 19237925  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  19237924 cttctgaagtgatgt 19237910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 13902616 - 13902504
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||| ||||||||||||||| ||| ||||||| || |||| |||||||||| ||||||||||||  |||||| || |||||||||||||||||||| |    
T  13902616 tgaaggggagaaaaacacaagaagggaggttgaa-ttgtgttagctttttcttcgttttctcctacataagtcaatgatcagaagcaaatagagttcaac 13902518  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||||| |||||||    
T  13902517 ttctgatgtgatgt 13902504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 4493739 - 4493853
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  4493739 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttct 4493837  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  4493838 acttctgaagtgatgt 4493853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 33604099 - 33604213
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||| |||     
T  33604099 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagaattct 33604197  T
Q  1029 gcttctgaagtgatgt 1044  Q
    |||||||| |||||||    
T  33604198 gcttctgacgtgatgt 33604213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21211542 - 21211427
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg----gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| ||||    |||||| || |||| ||||||| || ||||||||||||||||||| ||| ||||||| | |||||||||    
T  21211542 tgaaggtgagaaaaacacaagaaggggaggggttgaa-ttgtgttagctttttattcgttttctcctactgaagtcgctgatcagaagtagatagagttc 21211444  T
Q  1028 agcttctgaagtgatgt 1044  Q
    |||||||||| ||||||    
T  21211443 agcttctgaaatgatgt 21211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 565 - 684
Target Start/End: Original strand, 45291895 - 45292014
Alignment:
Q  565 cgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcgaggtacactttcaggg 664  Q
    ||||||||||  ||||||||||||||||| |||||  |||||         || || ||||||||||||| |||  ||||||||||||||||||||||||    
T  45291895 cgttttggatgtgaatgactaacggaagagactttgagggagtttttggttcgattccttgattcagggatgtgcctgatagcgaggtacactttcaggg 45291994  T
Q  665 acccaaatgagggtttactc 684  Q
    ||||||||||||||||||||    
T  45291995 acccaaatgagggtttactc 45292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 39285503 - 39285390
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| |||||| |  |||| ||||   ||||||||  ||||||||||||||||||| |  ||||||| | ||||||||||||    
T  39285503 tgaaggtgagaaaaacacaagaaggggggattgaattgtgttacttttttcttcattttctcctactgaagtcagtaatcagaagtagatagagttcagc 39285404  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  39285403 ttctgaagtgatgt 39285390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 5001826 - 5001711
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| | || | | ||||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||     
T  5001826 tgaaggtgagaaaaacacaagaagtggaggttaaattatgttagctttttcttcgttttctcctaagctgaaagcactgatcagaagcaaataaagttct 5001727  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||||||||||||||    
T  5001726 gcttctgaagtgatgt 5001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 936 - 1047
Target Start/End: Complemental strand, 16315497 - 16315383
Alignment:
Q  936 ggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||||||| ||  |||||||| || |||| | |||||||| |||||||||||  |||||  ||||| ||||||||||||||||||| |||    
T  16315497 ggtgagaaaaacacaagaaggaggggttgaa-ttgtgttaggtttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctgct 16315399  T
Q  1032 tctgaagtgatgtcca 1047  Q
    ||||||||||| ||||    
T  16315398 tctgaagtgatttcca 16315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 12367720 - 12367606
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||| |||||||||||||||| ||||||||||| || ||||  ||||||||| |||||||||||   ||||  ||||| |||||||||||||||||||     
T  12367720 tgaagttgagaaaaacacaagacggggggttgaa-ttgtgttatctttttcttcgttttctcctaaggtgaaaacactgatcagaagcaaatagagttct 12367622  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  12367621 tcttctgaagtgatgt 12367606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 13259406 - 13259292
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||  ||||   ||||| ||||||  |||||||||||     
T  13259406 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttttctttttcttcgttttctcctaagctgacaacactgatcagaaataaatagagttct 13259308  T
Q  1029 gcttctgaagtgatgt 1044  Q
    |||||| |||||||||    
T  13259307 gcttctaaagtgatgt 13259292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 536 - 685
Target Start/End: Complemental strand, 40600861 - 40600710
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggag--nnnnnnnngcgttttcttgattcaggg 633  Q
    |||||| ||||| | ||||||||| |||||||||||||  |||||||||||||||||| ||||||||||||          | |||| |||| | || ||    
T  40600861 ccagatcagcagagctaacgctcagttaacgttttggacgggaatgactaacggaagagactttcggggagttttttttttgtgtttccttgttccaagg 40600762  T
Q  634 acgtggttgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    | |||  |||||| |||| ||| |||||||||||||||||||||||||||||    
T  40600761 atgtgcctgatagagaggcacattttcagggacccaaatgagggtttactct 40600710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 14186880 - 14186995
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| |||    
T  14186880 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttactttttcttctttttctcctaggctgaaaacactgatcagaagcagatagaattc 14186978  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  14186979 tacttctgaagtgatgt 14186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 622 - 684
Target Start/End: Complemental strand, 38516682 - 38516620
Alignment:
Q  622 cttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||| |||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  38516682 cttgatccagggatgtgtctgatagcgatgtacactttcagggacccaaatgagggtttactc 38516620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 980 - 1044
Target Start/End: Complemental strand, 13424831 - 13424766
Alignment:
Q  980 tctttgttttctcc-tactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| ||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  13424831 tcttcgttttctccatactgaggtcactgatcagaagcatatagagttcagcttctgaagtgatgt 13424766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 11792065 - 11792179
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||  ||||||||| |||||||||||   ||||  ||||| ||||||||| |||| ||||     
T  11792065 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttatctttttcttcgttttctcctaagttgaaaacactgatcagaagcagatagtgttct 11792163  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  11792164 acttctgaagtgatgt 11792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 954 - 1047
Target Start/End: Complemental strand, 13731616 - 13731522
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||| | ||||||||||||||||||| |||||||||||||| ||||    
T  13731616 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacacagatcagaagcaaatagagttctgcttctgaagtgatttcca 13731522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21284337 - 21284223
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||  ||||| |||||  |||||  ||||| ||||||||| |||||||||     
T  21284337 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttctccgttttttcctaagctgaaaacactgatcagaagcagatagagttct 21284239  T
Q  1029 gcttctgaagtgatgt 1044  Q
      ||||||||||||||    
T  21284238 atttctgaagtgatgt 21284223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 29936301 - 29936194
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| |||||||||      ||||||||||||||| |||||||| ||   ||||  || || ||||||||||||||||||| |    
T  29936301 tgaaggtgagaaaaacacaag-ggggggttg------tgtttgctttttcttcgttttctcgtaagatgaaaacattgatcagaagcaaatagagttctg 29936209  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  29936208 cttctgaagtgatgt 29936194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 985 - 1044
Target Start/End: Complemental strand, 9099166 - 9099107
Alignment:
Q  985 gttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||    
T  9099166 gttttttcctactgaagtcactgatcagaagcagatagaattcagcttttgaagtgatgt 9099107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 985 - 1044
Target Start/End: Complemental strand, 9099980 - 9099921
Alignment:
Q  985 gttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||    
T  9099980 gttttttcctactgaagtcactgatcagaagcagatagaattcagcttttgaagtgatgt 9099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 930 - 1037
Target Start/End: Complemental strand, 16557575 - 16557466
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  || |||||||  |||||  ||||| ||||||||| ||||||||    
T  16557575 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttatctcctaagctgaaaacactgatcagaagcagatagagtt 16557477  T
Q  1027 cagcttctgaa 1037  Q
    |  ||||||||    
T  16557476 ctacttctgaa 16557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 930 - 1037
Target Start/End: Original strand, 16608087 - 16608196
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  || |||||||  |||||  ||||| ||||||||| ||||||||    
T  16608087 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttatctcctaagctgaaaacactgatcagaagcagatagagtt 16608185  T
Q  1027 cagcttctgaa 1037  Q
    |  ||||||||    
T  16608186 ctacttctgaa 16608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 641 - 684
Target Start/End: Original strand, 45296096 - 45296139
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  45296096 tgatagcgaggtacacttttagggacccaaatgagggtttactc 45296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 21691615 - 21691733
Alignment:
Q  930 tctgaaggtgagaaaaacacaaga---ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagag 1024  Q
    ||||||||||||||||||||||||   ||||||||| |||| |||| |||||||||   ||||||||||  |||||  ||||| ||||||||| ||| ||    
T  21691615 tctgaaggtgagaaaaacacaagaaagggggggttg-aattgtgttggctttttctacattttctcctaagctgaaaacactgatcagaagcagataaag 21691713  T
Q  1025 ttcagcttctgaagtgatgt 1044  Q
    |||  |||||||||||||||    
T  21691714 ttctacttctgaagtgatgt 21691733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 995
Target Start/End: Original strand, 30025128 - 30025192
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||| |||||||||||    
T  30025128 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttgctttttcttcgttttctccta 30025192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 11318589 - 11318707
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| ||  |||||||| || || | ||||||| || ||||||| |||  |||||  ||||| ||||||| |||||||||||    
T  11318589 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgctagcttttttttagttttcttctaagctgaaaacactgatcagaagaaaatagagttc 11318687  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||||||||||||| ||||    
T  11318688 ggcttctgaagtgatttcca 11318707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 15705458 - 15705343
Alignment:
Q  932 tgaaggtgagaaaaa--cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||  ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||  ||| | |||||||||||||||||||    
T  15705458 tgaaggtgagaaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaacacagatcagaagcaaatagagttc 15705360  T
Q  1028 agcttctgaagtgatgt 1044  Q
      ||||||||| |||||    
T  15705359 tacttctgaagagatgt 15705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 13027914 - 13027800
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||| ||||||| || |||||||||||||||  ||||||||||  | |||  || || ||||||||| |||||||||     
T  13027914 tgaaggtgagaaaaacacaagaagggaggttgaa-ttgtgtttgctttttcttcattttctcctaagccgaaaacattgatcagaagcagatagagttct 13027816  T
Q  1029 gcttctgaagtgatgt 1044  Q
     ||||| |||||||||    
T  13027815 acttctaaagtgatgt 13027800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 954 - 1047
Target Start/End: Original strand, 13645669 - 13645763
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||| | ||||||||||||||||||| ||||||||| |||| ||||    
T  13645669 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaccgatcagaagcaaatagagttctgcttctgaactgatttcca 13645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 550 - 682
Target Start/End: Complemental strand, 42537850 - 42537718
Alignment:
Q  550 ttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcga 649  Q
    |||||| ||| |||||||||||||   ||||||| ||||||||| || |||||||||         |||||  |||||||||||| ||   |||||||||    
T  42537850 ttaacgttcaattaacgttttggacgtgaatgacaaacggaagagacattcggggagtttttggttcgtttcattgattcagggatgtacctgatagcga 42537751  T
Q  650 ggtacactttcagggacccaaatgagggtttac 682  Q
    |  |||||||||||||||||| |||||||||||    
T  42537750 gcaacactttcagggacccaactgagggtttac 42537718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 2499223 - 2499337
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||||| |  |||| ||||  |||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||      
T  2499223 tgaaggtgagaaaaacacaagaagggggattgaattgtgttaactttttcttcattttctcctaagctgaaaacactaatcagaagcagatagagttcta 2499322  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||| ||||||    
T  2499323 cttctgaaatgatgt 2499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 928 - 995
Target Start/End: Original strand, 8182149 - 8182215
Alignment:
Q  928 aatctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||  |||||||||  ||||||||||    
T  8182149 aatctgaaggtgagaaaaacacaagaagggggttg-aattgtgttgcctttttcttgtttttctccta 8182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 13138889 - 13138774
Alignment:
Q  932 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| |  ||||||||| || |||| ||||||||||  ||||||| ||  |||||  || || ||||||||| |||||||||    
T  13138889 tgaaggtgagaaaaacacaagaagagggggttgaa-ttgtgttggctttttcttctttttctcttatgctgaaaacattgatcagaagcagatagagttc 13138791  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  13138790 tacttctgaagtgatgt 13138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 995
Target Start/End: Original strand, 1292240 - 1292311
Alignment:
Q  925 aagaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    |||||||||||||||||||||||||||||  ||| ||||| |||| |||| ||||||||||  ||||||||||    
T  1292240 aagaatctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgttagctttttcttctttttctccta 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 976 - 1042
Target Start/End: Original strand, 13302100 - 13302168
Alignment:
Q  976 tttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 1042  Q
    |||||||| |||||||||||  |||||  ||||  ||||||||||||||||||| ||||||||||||||    
T  13302100 tttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 13302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 13879361 - 13879452
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||||||||||||||  ||||||| ||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  13879361 ggggggttgaa-ttgtgtttgctttttcttctttttctcttatgctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13879452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 974 - 1044
Target Start/End: Complemental strand, 16317517 - 16317445
Alignment:
Q  974 gctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||||| |||||||| ||  |||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  16317517 gctttttcttcgttttctcataagctgaaaacactgatcagaagcaaataaagttctgcttctgaagtgatgt 16317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 623 - 684
Target Start/End: Original strand, 38517751 - 38517812
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||| ||||||||||  ||||||||| ||| ||||| |||||| |||||||||||||||||    
T  38517751 ttgatccagggacgtgtctgatagcgatgtatacttttagggactcaaatgagggtttactc 38517812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 22580220 - 22580103
Alignment:
Q  930 tctgaaggtgagaaaaacacaa--gaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||||||||||||||||  | ||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||| ||||| ||| |||    
T  22580220 tctgaaggtgagaaaaacacaaggggggggggttg-aattgtgttggctttttcttctttttctcctatgctgaaaacactgatcaaaagcagataaagt 22580122  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||| ||||||    
T  22580121 tctacttctgaactgatgt 22580103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 928 - 1047
Target Start/End: Complemental strand, 2914623 - 2914502
Alignment:
Q  928 aatctgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagag 1024  Q
    |||||||| || ||||||| |||||| |||| | |  |||| |||| |||||||||| |||| ||||||  |||||  ||||| ||||||||||||||||    
T  2914623 aatctgaatgtaagaaaaaaacaagaaggggagattgaattgtgttagctttttcttcgttt-ctcctaagctgaaaacactgatcagaagcaaatagag 2914525  T
Q  1025 ttcagcttctgaagtgatgtcca 1047  Q
    ||| |||||||||| ||| ||||    
T  2914524 ttctgcttctgaagagatttcca 2914502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 28623284 - 28623202
Alignment:
Q  964 aattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  28623284 aattgtgttggctttttcttctttttctcctaagctgaacacactgatcagaagcagatagagttctacttctgaagtgatgt 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 995 - 1041
Target Start/End: Original strand, 3921650 - 3921696
Alignment:
Q  995 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 1041  Q
    |||||||||||  |||| ||||| |||||||||||||||||||||||    
T  3921650 actgaagtcacaattcataagcagatagagttcagcttctgaagtga 3921696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 8932954 - 8933003
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  8932954 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 8933003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 977 - 1048
Target Start/End: Original strand, 9069000 - 9069073
Alignment:
Q  977 ttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtccat 1048  Q
    ||||||| |||||||||||  |||||  ||||| ||||||||||||| ||||  |||||||||||||| |||||    
T  9069000 ttttcttcgttttctcctaagctgaaaacactgatcagaagcaaataaagttttgcttctgaagtgatttccat 9069073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 976 - 1047
Target Start/End: Original strand, 13681534 - 13681607
Alignment:
Q  976 tttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    |||||||| |||||||||||  |||||  || || | ||||||||||||||||| |||||||||||||| ||||    
T  13681534 tttttcttcgttttctcctaagctgaaaacattgattagaagcaaatagagttctgcttctgaagtgatttcca 13681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 983
Target Start/End: Complemental strand, 1560007 - 1559955
Alignment:
Q  931 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 983  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  1560007 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttctt 1559955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 14424525 - 14424616
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || ||||| ||||||||| |||||||||||  || ||  ||||| ||||||||| || ||||||  |||||||||||||||    
T  14424525 ggggggttgaa-ttgtgtttactttttcttcgttttctcctaatctaaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 14424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 954 - 1044
Target Start/End: Complemental strand, 16546277 - 16546186
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||| |||||  |||||||||||||||    
T  16546277 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16546186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 16619385 - 16619476
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||| |||||  |||||||||||||||    
T  16619385 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 1e-44; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 536 - 684
Target Start/End: Complemental strand, 18912696 - 18912548
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggac 635  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||        |||||||||||||||||||||    
T  18912696 ccagatcagcagtgttaacgctcagttaacgttttggatgggaatgactaacggaagagactttcagggagttttttttgcgttttcttgattcagggac 18912597  T
Q  636 gtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
     ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  18912596 atggttaatagtgaggtacactttcagggacccaaatgagggtttactc 18912548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 554 - 684
Target Start/End: Original strand, 18939784 - 18939915
Alignment:
Q  554 cgctcacttaacgttttggatcgg-aatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcgaggt 652  Q
    |||||| |||||||||||||| || |||||||||||||||| ||||||||||||        |||||||||||| | |||||||||||||||||||| ||    
T  18939784 cgctcagttaacgttttggatgggtaatgactaacggaagagactttcggggagtttgttttgcgttttcttgacttagggacgtggttgatagcgaagt 18939883  T
Q  653 acactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||||||||||||||||||||||||    
T  18939884 acactttcagggacccaaatgagggtttactc 18939915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 19889899 - 19889782
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||  |||||  ||||| | |||||||||||||||||     
T  19889899 tgaaggtgagaaaaacacaagaaggggggttgaa-ttttgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcaaatagagttct 19889801  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||||||||    
T  19889800 gcttctgaagtgatgtcca 19889782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 12967511 - 12967622
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| |||||  ||||| || |||| |||||||||| |||||||||| ||||||||||| |||||| | ||||||| |||||    
T  12967511 tgaaggtgagaaaaacacaagaagggggagttgaa-ttgtgttagctttttcttcgttttctcctgctgaagtcactattcagaggaaaatagaattcag 12967609  T
Q  1030 cttctgaagtgat 1042  Q
    |||||||||||||    
T  12967610 cttctgaagtgat 12967622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 19250349 - 19250236
Alignment:
Q  931 ctgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||||| | ||||||||| || |||| |||||| ||| ||||||||||||||||||||||  ||| ||||| |||||||||      
T  19250349 ctgaaggtgagaaaaacacaagaagaggggttgaa-ttgtgttagcttttacttcgttttctcctactgaagtcactaatcaaaagcagatagagttcca 19250251  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  19250250 cttctgaagtgatgt 19250236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 954 - 1044
Target Start/End: Complemental strand, 26418658 - 26418569
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||| | |||||||||||||||    
T  26418658 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctactgaagtcactgttaaaaagcagatagagttgaacttctgaagtgatgt 26418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 986 - 1041
Target Start/End: Original strand, 6252657 - 6252712
Alignment:
Q  986 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 1041  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6252657 ttttctcctactgaagtcactgttcagaagcagatagagttcagcttctgaagtga 6252712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 14310877 - 14310987
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||||| ||||| |||||| ||| ||||||| || |||||  |||||||| |||||||||||||||| |||||| ||||||||| ||||||| ||||    
T  14310877 tgaaggtgacaaaaatacaagaagggaggttgaa-ttgtgttttatttttcttcgttttctcctactgaaatcactgatcagaagcagatagagtccagc 14310975  T
Q  1031 ttctgaagtgat 1042  Q
    ||||||||||||    
T  14310976 ttctgaagtgat 14310987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 15902393 - 15902509
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||| ||||||| ||||| |    
T  15902393 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttcttctttttctcctaagctgaaaacactgatcagaggcaaataaagttctg 15902491  T
Q  1030 cttctgaagtgatgtcca 1047  Q
    ||||||||||||| ||||    
T  15902492 cttctgaagtgatttcca 15902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 9099621 - 9099560
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  9099621 ttgattcagggatgtgcttgatagcgaggtacactttaagggacccaaatgagggtttactc 9099560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 934 - 1044
Target Start/End: Complemental strand, 14063999 - 14063890
Alignment:
Q  934 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    ||||||||||||||||||||  ||||||||| || ||||  | ||||||||||||||||||||||||||||| | ||| ||| | | ||||||| |||||    
T  14063999 aaggtgagaaaaacacaagaaaggggttgaa-ttgtgttaacattttctttgttttctcctactgaagtcaccgatcaaaagtagaaagagttccgcttc 14063901  T
Q  1034 tgaagtgatgt 1044  Q
    ||| |||||||    
T  14063900 tgatgtgatgt 14063890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 936 - 1041
Target Start/End: Original strand, 6174498 - 6174599
Alignment:
Q  936 ggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttct 1034  Q
    |||||||||||||||||| ||||||||||  | | |||| ||||||||||    ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6174498 ggtgagaaaaacacaagaaggggggttgagttgtggttt-ctttttcttt----tctcctattgaagtcactgttcagaagcagatagagttcagcttct 6174592  T
Q  1035 gaagtga 1041  Q
     ||||||    
T  6174593 aaagtga 6174599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 23539185 - 23539073
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| ||| ||||||| || |||| | |||||||| ||||| ||||| ||||||||||  ||| ||||| ||||| ||||||    
T  23539185 tgaaggtgagaaaaacacaagaagggaggttgaa-ttgtgttagttttttcttcgttttttcctaatgaagtcactagtcaaaagcagatagaattcagc 23539087  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||| ||||||    
T  23539086 ttctgaaatgatgt 23539073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 6089925 - 6090039
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||| ||||| |||| |||| |||||||| | |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  6089925 tgaaggtgagaaaaacacaagaagggaggttg-aattgtgttagctttttcatcgttttctcctaagctgaaaacactgatcagaagcagatagagttct 6090023  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  6090024 acttctgaagtgatgt 6090039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 14954607 - 14954721
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  14954607 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttct 14954705  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||| ||||    
T  14954706 acttctgaagtaatgt 14954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 19886038 - 19885924
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||| | ||||||||||||| | |||  ||||||||| |||||||||||  |||||  ||||  |||||||||||||||||||     
T  19886038 tgaaggtgagaaaaacacaaaaaggggggttgaaatgt-gttatctttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttct 19885940  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  19885939 acttctgaagtgatgt 19885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 617 - 684
Target Start/End: Complemental strand, 20997700 - 20997633
Alignment:
Q  617 gttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||| ||||| | |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  20997700 gttttattgatcctgggatgtgcttgatagcgaggtacattttcagggacccaaatgagggtttactc 20997633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 29952400 - 29952283
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg----ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||| ||||||||||||||||||    ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  29952400 tgaaggtgacaaaaacacaagaggggggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 29952302  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||||||||||    
T  29952301 tctacttctgaagtgatgt 29952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 30001554 - 30001437
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg----ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||| ||||||||||||||||||    ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  30001554 tgaaggtgacaaaaacacaagaggggggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 30001456  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||||||||||    
T  30001455 tctacttctgaagtgatgt 30001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 641 - 686
Target Start/End: Original strand, 36164594 - 36164639
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  36164594 tgatagcgagggacactttcagggacccaaatgagggtttactctt 36164639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 12727196 - 12727082
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| || |||||||| || |||| ||||||| || |||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  12727196 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagcttttttttcgttttctcctaagctgaaaacactgatcagaagcagatagaattct 12727098  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  12727097 acttctgaagtgatgt 12727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 40799085 - 40799201
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggg---ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||| |||   ||||||| || ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||||||    
T  40799085 tgaaggtgagaaaaacacaagaagggtggggttgaa-ttgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagtt 40799183  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  40799184 ctacttctgaagtgatgt 40799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 8875086 - 8874971
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| ||  |||||||| || |||| | |||||||| ||||| |||||  |||||  ||||| ||||||||||||| ||||     
T  8875086 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgttggttttttcttcgttttttcctaagctgaaaacactgatcagaagcaaataaagttt 8874988  T
Q  1028 agcttctgaagtgatgt 1044  Q
     ||||||||||||||||    
T  8874987 tgcttctgaagtgatgt 8874971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 14393956 - 14393841
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| |||||| |||||  ||||| || |||| |||||||||| |||||||||||   ||||  ||||| ||||||| |||||||||||    
T  14393956 tgaaggtgagaaaaatacaagaagggggcgttgaa-ttgtgttagctttttcttcgttttctcctaagttgaaaacactgatcagaagaaaatagagttc 14393858  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  14393857 tacttctgaagtgatgt 14393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 994 - 1044
Target Start/End: Original strand, 20724298 - 20724348
Alignment:
Q  994 tactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  20724298 tactgaagtcactgatcagaagcagatagatttcagcttctgaagtgatgt 20724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 52282991 - 52283106
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||||||||||| || ||||  |||||| ||  ||||||||||  |||||  ||||| ||||||||| |||||||||    
T  52282991 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttgactttttattctttttctcctaagctgaaaacactgatcagaagcagatagagttc 52283089  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  52283090 tacttctgaagtgatgt 52283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 932 - 1039
Target Start/End: Original strand, 17667566 - 17667676
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||| ||||  ||||||||||| || |||| | ||||||||  ||||||||||  |||||  ||||| ||| |||||||||||||||    
T  17667566 tgaaggtgagaaaaacaaaagaacggggggttgaa-ttgtgttagttttttcttcattttctcctaagctgaaaacactgatcataagcaaatagagttc 17667664  T
Q  1028 agcttctgaagt 1039  Q
     |||||||||||    
T  17667665 tgcttctgaagt 17667676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 49643725 - 49643607
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg--gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||| |||||||||||||||| | ||  |||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||| |||||||||||||||    
T  49643725 tgaagatgagaaaaacacaagaagcggaggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcaaaagcaaatagagttc 49643627  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||| ||||||||| ||||    
T  49643626 tgcttatgaagtgatttcca 49643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 1242035 - 1241921
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| || ||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  1242035 tgaaggtgagaaaaacacaagaagtggggttg-aattgtgttggttttttcttctttttctcctaagctgaaaacactgatcagaagcagatagatttct 1241937  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  1241936 acttctgaagtgatgt 1241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 976 - 1044
Target Start/End: Original strand, 12221300 - 12221368
Alignment:
Q  976 tttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||||||| |||||| ||||||||||||| || ||||||||| ||| ||||||||||||  ||||||||    
T  12221300 tttttcttcgttttcgcctactgaagtcattgatcagaagcagatatagttcagcttctatagtgatgt 12221368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 632 - 684
Target Start/End: Complemental strand, 19801838 - 19801786
Alignment:
Q  632 ggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||| | |||||||||||||||||||||||||||  |||||||||||||||    
T  19801838 ggacgtagctgatagcgaggtacactttcagggaccggaatgagggtttactc 19801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 49554470 - 49554356
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||| || ||||||||||| || |||| | ||||||||  ||||||||||  |||||  || || ||||||||| |||||||||     
T  49554470 tgaaggtgagaaaaacacacgaaggggggttgaa-ttgtgttggttttttcttctttttctcctaagctgaaaacattgatcagaagcagatagagttct 49554372  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  49554371 acttctgaagtgatgt 49554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 933 - 1044
Target Start/End: Original strand, 2560383 - 2560496
Alignment:
Q  933 gaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||| |||||||||| |||| ||||| ||||||||| || ||||||||  | |||  ||||| | ||||||| |||||||||      
T  2560383 gaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttcttcgtcttctcctaagccgaaaacactgataagaagcagatagagttcta 2560481  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||| |||||||||||    
T  2560482 cttttgaagtgatgt 2560496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 933 - 1044
Target Start/End: Original strand, 16031701 - 16031814
Alignment:
Q  933 gaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| | | ||||||| || || || |||||||||  ||||||||||  ||||| | |||| |||||||||||||||||||      
T  16031701 gaaggtgagaaaaacacaagaagagaggttgaa-ttgtgatttctttttcttctttttctcctaagctgaaattactgatcagaagcaaatagagttcca 16031799  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||| ||||    
T  16031800 cttctgaagtaatgt 16031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 995
Target Start/End: Complemental strand, 22465439 - 22465377
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||||||||||||||||| ||||||||| |||| |||| ||||||||||  ||||||||||    
T  22465439 tgaaggtgagaaaaacacaaggggggggttg-aattgtgttagctttttcttccttttctccta 22465377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 52919622 - 52919735
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||||| || |||| |||| | |||||||| |||||||||||  |||||  ||||| ||| ||||| |||||||||      
T  52919622 tgaaggtgagaaaaacacaagaagggggctg-aattgtgttagttttttcttcgttttctcctaagctgaaaacactgatcacaagcagatagagttcta 52919720  T
Q  1030 cttctgaagtgatgt 1044  Q
     || |||||||||||    
T  52919721 tttttgaagtgatgt 52919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1042
Target Start/End: Complemental strand, 12964046 - 12963934
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| ||| |||||| |||| |||| ||||||||||  |||||||||   |||||  ||||| | |||||||||||||||||     
T  12964046 tgaaggtgagaaaaacacaagaaggagggttg-aattgtgttagctttttcttcattttctcctcagctgaaaacactgataagaagcaaatagagttct 12963948  T
Q  1029 gcttctgaagtgat 1042  Q
    ||||  ||||||||    
T  12963947 gcttacgaagtgat 12963934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 14968561 - 14968680
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg------ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaataga 1023  Q
    |||||||||||||||||||||| |||||      ||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||    
T  14968561 tgaaggtgagaaaaacacaagaaggggggaggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataga 14968659  T
Q  1024 gttcagcttctgaagtgatgt 1044  Q
    ||||  |||||||||||||||    
T  14968660 gttctacttctgaagtgatgt 14968680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 938 - 1044
Target Start/End: Complemental strand, 17239883 - 17239775
Alignment:
Q  938 tgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttct 1034  Q
    ||||||||||| ||||  |||||||||| || |||| |||||||||| |||||||||||  |||||  || || ||| ||||||||||||||| |||| |    
T  17239883 tgagaaaaacataagaatgggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaatgatcaaaagcaaatagagttctgctttt 17239785  T
Q  1035 gaagtgatgt 1044  Q
    ||||||||||    
T  17239784 gaagtgatgt 17239775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 936 - 1044
Target Start/End: Complemental strand, 21639237 - 21639128
Alignment:
Q  936 ggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    ||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  ||||    
T  21639237 ggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttctacttc 21639139  T
Q  1034 tgaagtgatgt 1044  Q
    ||||| |||||    
T  21639138 tgaagagatgt 21639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 684
Target Start/End: Complemental strand, 11137980 - 11137912
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||| |||| |||||| |||  ||||||||||||||| ||| || || ||||||||||||||||||    
T  11137980 cgttttcatgatccagggatgtgtctgatagcgaggtacatttttagagaaccaaatgagggtttactc 11137912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 954 - 1047
Target Start/End: Original strand, 13939116 - 13939210
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||||| || |||| ||||||||||||||||||||||  |||||  ||||  ||||||||||||||| ||| |||||| || |||| ||||    
T  13939116 ggggggttgaa-ttgtgttagctttttctttgttttctcctaagctgaaaacactaatcagaagcaaatagatttctgcttctaaattgatttcca 13939210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 22804980 - 22804867
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||| |||||||   ||||| | |||||||| |||||||||||   ||||  ||||| ||||||||| |||||||||    
T  22804980 tgaaggtgagaaaaacacaagaaggggaggttgaa---ttgttagttttttcttcgttttctcctaagttgaaaacactgatcagaagcagatagagttc 22804884  T
Q  1028 agcttctgaagtgatgt 1044  Q
      ||| |||||||||||    
T  22804883 tacttttgaagtgatgt 22804867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 623 - 683
Target Start/End: Complemental strand, 37463740 - 37463680
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttact 683  Q
    ||||| |||||||||| |||||||||||  ||||||||||| ||||||  |||||||||||    
T  37463740 ttgatccagggacgtgcttgatagcgagaaacactttcaggaacccaagcgagggtttact 37463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 641 - 685
Target Start/End: Original strand, 37465006 - 37465050
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  37465006 tgatagcgagcaacactttcagggacccaaattagggtttactct 37465050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 931 - 1038
Target Start/End: Original strand, 2025292 - 2025397
Alignment:
Q  931 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||   ||||||||| ||||||    | ||||||||||| |||||||||     
T  2025292 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct---ttttctcctaactgaaaatgcagttcagaagcagatagagttct 2025387  T
Q  1029 gcttctgaag 1038  Q
     |||||||||    
T  2025388 acttctgaag 2025397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 11189191 - 11189304
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||| |||| |||| |||| | ||||||||  ||||||||||   ||||  ||||| ||||||| | |||||||||      
T  11189191 tgaaggtgagaaaaacacaagaagggtgttg-aattgtgttggttttttcttctttttctcctaagatgaaaacactgatcagaagaagatagagttcta 11189289  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||| |||||||||||    
T  11189290 cttatgaagtgatgt 11189304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 641 - 684
Target Start/End: Complemental strand, 36163426 - 36163383
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||    
T  36163426 tgatagcgagggacactttcagggatccaaatgaaggtttactc 36163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 982
Target Start/End: Original strand, 38194117 - 38194174
Alignment:
Q  926 agaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  38194117 agaatctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 38194174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 932 - 1043
Target Start/End: Original strand, 41494200 - 41494312
Alignment:
Q  932 tgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||| ||||||||||| | ||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||| |||||||||||     
T  41494200 tgaaggtgagcaaaacacaagaagcggggttgaa-ttgtgttggctttttcttc-ttttctcctaagctgaaaacactgatcagaagtaaatagagttct 41494297  T
Q  1029 gcttctgaagtgatg 1043  Q
      |||||||||||||    
T  41494298 atttctgaagtgatg 41494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 11073624 - 11073673
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  11073624 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttct 11073673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 29854607 - 29854721
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggg--gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| ||||  |||||| || |||| ||||||||||  ||||||||||  |||||  ||| | ||||||||| |||||||||    
T  29854607 tgaaggtgagaaaaacacaagaaggggaggttgaa-ttgtgttagctttttcttctttttctcctaaactgaaaacac-gatcagaagcagatagagttc 29854704  T
Q  1028 agcttctgaagtgatgt 1044  Q
      | |||||||||||||    
T  29854705 tacatctgaagtgatgt 29854721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 41044900 - 41044950
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  41044900 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 41044950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 964
Target Start/End: Original strand, 16881443 - 16881476
Alignment:
Q  931 ctgaaggtgagaaaaacacaagaggggggttgaa 964  Q
    ||||||||||||||||||||||| ||||||||||    
T  16881443 ctgaaggtgagaaaaacacaagaagggggttgaa 16881476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 982
Target Start/End: Original strand, 17960803 - 17960855
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  17960803 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 17960855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 982
Target Start/End: Complemental strand, 19888187 - 19888135
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  19888187 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 19888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 1041
Target Start/End: Original strand, 31302547 - 31302657
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||| |||||| |||||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  31302547 tgaaggtgagaaaa-cacaagaaggggggttg-aattgtgttggttttttcttctttttctcctatgctgaaaacactgatcagaagcagatagagttct 31302644  T
Q  1029 gcttctgaagtga 1041  Q
     ||||| ||||||    
T  31302645 acttctaaagtga 31302657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 38178606 - 38178491
Alignment:
Q  932 tgaaggtgagaaaaa-cacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| || |||| || |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||    
T  38178606 tgaaggtgagaaaaaacataagaaggagggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactaatcagaagcagatagagttc 38178508  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  38178507 ttcttctgaagtgatgt 38178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 3e-32; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 17304224 - 17304106
Alignment:
Q  930 tctgaaggtgagaaaaacacaaga-----ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagag 1024  Q
    ||||||||||||||||||||||||     ||||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  17304224 tctgaaggtgagaaaaacacaagaagggtggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagag 17304126  T
Q  1025 ttcagcttctgaagtgatgt 1044  Q
    ||||||||||||||||||||    
T  17304125 ttcagcttctgaagtgatgt 17304106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 930 - 1048
Target Start/End: Original strand, 15301411 - 15301531
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||    
T  15301411 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagtt 15301509  T
Q  1027 cagcttctgaagtgatgtccat 1048  Q
    | |||||| ||||||| |||||    
T  15301510 ctgcttctaaagtgatttccat 15301531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 3680299 - 3680411
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||| |||||||| | ||| |||||||||| |||||| ||||||||| ||||||||||||    
T  3680299 tgaaggtgagaaaaacacaagaagggtggttg-aattgtgtttgttttttcttcgatttatcctactgaaatcactgatcagaagcagatagagttcagc 3680397  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||||| |||||||    
T  3680398 ttctgaggtgatgt 3680411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 13435080 - 13435194
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||  |||||  ||||| ||||||||| |||||||||     
T  13435080 tgaaggtgagaaaaaaacaagaaggggggttg-aattgtgtttgctttttctttgttttctcctaagctgaaaacactgatcagaagcagatagagttct 13435178  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  13435179 acttctgaagtgatgt 13435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 964 - 1044
Target Start/End: Original strand, 7762867 - 7762947
Alignment:
Q  964 aattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||| ||| |||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  7762867 aattgtgttagctatttcttcgttttctcctactgaaatcactgatcagaagcagatagagttcagcttctgaagtgatgt 7762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 13601362 - 13601479
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||| ||||||||| ||||||||||| |  |||| |||||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  13601362 tgaaggtgagaataacacaagaaggggggttgaa-tcgtgttagctttttcttagttttctcctaagctgaaaacactgatcagaagcaaatagagttct 13601460  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||||||||||| ||||    
T  13601461 gcttctgaagtgatttcca 13601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 17380757 - 17380872
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||    
T  17380757 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttc 17380855  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  17380856 tacttctgaagtgatgt 17380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 19469849 - 19469938
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| |||||||| ||||||||||||||||||||||||| |||||| || |||||||||  |||||||||||||||    
T  19469849 ggggggttgaa-ttgtgttagctttttcattgttttctcctactgaagtcactgatcagaaacagatagagttccacttctgaagtgatgt 19469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 622 - 686
Target Start/End: Original strand, 9448765 - 9448829
Alignment:
Q  622 cttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    |||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  9448765 cttgatccagggatgtgtctgatagcgaggtacactttcagggacccaaatgagggtttactctt 9448829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 938 - 1041
Target Start/End: Original strand, 26941607 - 26941710
Alignment:
Q  938 tgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctga 1036  Q
    ||||||||||||||||  ||| |||||| || |||| |||||||||| ||||||| | ||||||||||||| ||||||||| ||||||||||| ||||||    
T  26941607 tgagaaaaacacaagaaagggagttgaa-ttgtgttagctttttcttcgttttcttccactgaagtcactgatcagaagcagatagagttcagattctga 26941705  T
Q  1037 agtga 1041  Q
    |||||    
T  26941706 agtga 26941710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1043
Target Start/End: Original strand, 19085327 - 19085440
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||| |||||||||||| |||||||||| |||| |||| |||||||||| |||||||| ||  |||||  ||||| | |||||||||||||||||     
T  19085327 tgaaggtgtgaaaaacacaagaaggggggttg-aattgtgttggctttttcttcgttttctcataagctgaaaacactgataagaagcaaatagagttct 19085425  T
Q  1029 gcttctgaagtgatg 1043  Q
    |||||||||||||||    
T  19085426 gcttctgaagtgatg 19085440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 21624284 - 21624401
Alignment:
Q  930 tctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||    
T  21624284 tctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagt 21624382  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    |   |||||||||||||||    
T  21624383 tttacttctgaagtgatgt 21624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 32543458 - 32543572
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| ||| |||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  32543458 tgaaggtgagaaaaacacaagaaggagggttg-aattgtgttagctttttcttctttttctcctaacctgaaaacactgatcagaagcagatagagttcc 32543556  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  32543557 acttctgaagtgatgt 32543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 536 - 606
Target Start/End: Original strand, 227136 - 227206
Alignment:
Q  536 ccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggag 606  Q
    |||||| ||||| |||||| |||| |||||||||||||| |||||||||||||||| | ||||||||||||    
T  227136 ccagatcagcagagttaacactcagttaacgttttggatgggaatgactaacggaaaagactttcggggag 227206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 10631331 - 10631446
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  || |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||    
T  10631331 tgaaggtgagaaaaacacaagaatggagggttgaa-ttgtgttagctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttc 10631429  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  10631430 tacttctgaagtgatgt 10631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 14101400 - 14101284
Alignment:
Q  930 tctgaaggtgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||||  |||||||||| || |||| |||||||||| |||||||||||  |||||   |||| ||||||||| ||||||||    
T  14101400 tctgaaggtgagaaaaacacaagaaagggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaatactgatcagaagcagatagagtt 14101302  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  ||| |||||||||||    
T  14101301 ctacttatgaagtgatgt 14101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 15532585 - 15532470
Alignment:
Q  932 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| |  ||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| |||| ||||||||||||||    
T  15532585 tgaaggtgagaaaaacacaagaagaaggggttgaa-ttgtgttagctttttcttctttttctcctaagctgaaaacactgatcaggagcaaatagagttc 15532487  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  15532486 tacttctgaagtgatgt 15532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 641 - 686
Target Start/End: Original strand, 18193023 - 18193068
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  18193023 tgatagcgagggacactttcagggacccaaatgagggtttactctt 18193068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 931 - 1044
Target Start/End: Original strand, 22801338 - 22801452
Alignment:
Q  931 ctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||| ||||  || |   ||||| ||||||||| |||||||||     
T  22801338 ctgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttcttatttttcacctaagctaataacactgatcagaagcagatagagttct 22801436  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  22801437 acttctgaagtgatgt 22801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 543 - 686
Target Start/End: Complemental strand, 226262 - 226119
Alignment:
Q  543 agcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttg 642  Q
    ||||| ||||||| ||| |||||||| || |  ||||||| |||| ||||| |||||| |||||        |||||| |||| | || ||| |||  ||    
T  226262 agcagagttaacgttcagttaacgttctgaacgggaatgattaacagaagagactttcagggagttttttttgcgtttccttgttccatggatgtgcctg 226163  T
Q  643 atagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  226162 atagcgaggcacactttcaaggacccaaatgagggtttactctt 226119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 641 - 684
Target Start/End: Original strand, 11020406 - 11020449
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  11020406 tgatagcgagggacactttcagggacccaaatgagggtttactc 11020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 16876107 - 16876217
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||  |||||||||| |||| |||||| ||||||||  ||||||| | ||||||  ||||| |||| || | ||||||||| ||    
T  16876107 tgaaggtgagaaaaacaca--aggggggttg-aattatgtttgttttttcttatttttctcttaactgaaaacactgatcaggagtagatagagttctgc 16876203  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  16876204 ttctgaagtgatgt 16876217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 19833942 - 19833829
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||| |  ||||||||| ||||||  ||||| ||||||||| ||||||| |      
T  19833942 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcatctttttctcctaactgaaaacactgatcagaagcagatagagtacca 19833844  T
Q  1030 cttctgaagtgatgt 1044  Q
    | |||||||||||||    
T  19833843 cctctgaagtgatgt 19833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 25593269 - 25593383
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| ||||||||||| || ||||   |||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |    
T  25593269 tgaaggtgagaaaaacacaag-ggggggttgaa-ttgtgttat-tttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatg 25593365  T
Q  1030 cttctgaagtgatgtcca 1047  Q
    ||| ||||||||| ||||    
T  25593366 cttatgaagtgatttcca 25593383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 19623205 - 19623296
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| ||||||||||||||||| | ||||||||||||||||    
T  19623205 ggggggttgaa-ttatgttggctttttcttcgttttctcctaagctaaaaacactgatcagaagcaaatagagtcctgcttctgaagtgatgt 19623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 9717018 - 9717135
Alignment:
Q  930 tctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||||||||||||||||||  ||| ||||| |||| ||||||| |||||||  ||||||||||   ||||  ||||| ||| ||||| |||||||    
T  9717018 tctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgtttgcattttcttctttttctcctaagttgaaaacactgatcaaaagcagatagagt 9717116  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||||||||||    
T  9717117 tccacttctgaagtgatgt 9717135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 931 - 1044
Target Start/End: Original strand, 16332923 - 16333038
Alignment:
Q  931 ctgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||   || | ||||||||| |||||||||    
T  16332923 ctgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttc 16333021  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  16333022 tacttctgaagtgatgt 16333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 934 - 1044
Target Start/End: Original strand, 16528511 - 16528624
Alignment:
Q  934 aaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||  ||||||||| |||| |||| |||||||||| |||||||||||   ||||  ||||| | ||||||| |||||||||      
T  16528511 aaggtgagaaaaacacaagaagggggggttg-aattgtgttagctttttcttcgttttctcctaagttgaaaacactgataagaagcagatagagttcta 16528609  T
Q  1030 cttctgaagtgatgt 1044  Q
     ||||||||||||||    
T  16528610 tttctgaagtgatgt 16528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1032
Target Start/End: Original strand, 19624971 - 19625073
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||||| |||||| |||  |||||| ||||  ||||||| |  ||||||||||    
T  19624971 tgaaggtgagaaaaacacaagacggggggttg-aattatgttagctttttcttcgttttcacctaaactgaaatcacacttcagaacctgatagagttca 19625069  T
Q  1029 gctt 1032  Q
    ||||    
T  19625070 gctt 19625073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 986 - 1041
Target Start/End: Original strand, 17926995 - 17927050
Alignment:
Q  986 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 1041  Q
    ||||||| ||| |||||||||||||||||||| |||||||||| ||||||| ||||    
T  17926995 ttttctcttaccgaagtcactgttcagaagcagatagagttcaacttctgatgtga 17927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 641 - 684
Target Start/End: Complemental strand, 18191789 - 18191746
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  18191789 tgatagcgtgggacactttcagggacccaaatgagggtttactc 18191746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 933 - 1044
Target Start/End: Original strand, 24116013 - 24116127
Alignment:
Q  933 gaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctac--tgaagt-cactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||| ||||||  |||||  | |||| |||||||||| |||||||||||   ||||   ||||| |||||||||||||||||||    
T  24116013 gaaggtgagaaaaacacaaggggggggggttgaa--tgtgttggctttttcttcgttttctcctaagttgaaaaacactggtcagaagcaaatagagttc 24116110  T
Q  1028 agcttctgaagtgatgt 1044  Q
     ||||||||||| ||||    
T  24116111 tgcttctgaagtaatgt 24116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 954 - 1044
Target Start/End: Complemental strand, 20113565 - 20113473
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcact-gttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || ||||||||||||||| |||||||||||  |||||  |||| | ||||||||| |||||||||  |||||||||||||||    
T  20113565 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 20113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 21234350 - 21234465
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| ||||||  ||||||||||| || |||| |||||||| |  ||||||||||  |||||  ||||| ||||||||| ||||| |||    
T  21234350 tgaaggtgagaaaaatacaagaatggggggttgaa-ttgtgttagctttttcctctttttctcctaagctgaaaacactgatcagaagcagatagaattc 21234448  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  21234449 tacttctgaagtgatgt 21234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 9447668 - 9447607
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||||||||  ||||| ||||||| ||||||||| || ||||| |||||||||||    
T  9447668 ttgattcagggacgtgtctgataacgaggtatactttcaggaactcaaataagggtttactc 9447607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 926 - 982
Target Start/End: Original strand, 32756750 - 32756806
Alignment:
Q  926 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  32756750 agaatctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 32756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 645 - 685
Target Start/End: Original strand, 30758894 - 30758934
Alignment:
Q  645 agcgaggtacactttcagggacccaaatgagggtttactct 685  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  30758894 agcgagggacactttcaaggacccaaatgagggtttactct 30758934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 955 - 1047
Target Start/End: Complemental strand, 14733045 - 14732952
Alignment:
Q  955 gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    |||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| |||||| |||||||||||  |||||||||||||| ||||    
T  14733045 gggggttgaa-ttgtgttagctttttcttcgttttctcctaagctaaaaacactgatcagaaacaaatagagttatgcttctgaagtgatttcca 14732952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 641 - 683
Target Start/End: Complemental strand, 11020220 - 11020178
Alignment:
Q  641 tgatagcgaggtacactttcagggacccaaatgagggtttact 683  Q
    |||||| |||| ||||||||||||||||||||||| |||||||    
T  11020220 tgatagtgagggacactttcagggacccaaatgagagtttact 11020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 959
Target Start/End: Complemental strand, 10972399 - 10972370
Alignment:
Q  930 tctgaaggtgagaaaaacacaagagggggg 959  Q
    ||||||||||||||||||||||||||||||    
T  10972399 tctgaaggtgagaaaaacacaagagggggg 10972370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 954 - 1044
Target Start/End: Complemental strand, 2675 - 2586
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2675 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctactgaagtcactgttcagaagcagatagagttcagcttctgaagtgatgt 2586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 13191 - 13303
Alignment:
Q  932 tgaaggtgagaaaaacac-aagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||| || |||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |    
T  13191 tgaaggtgagaaaaacacaaaaaggggggttg-aattgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcaac 13289  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  13290 ttctgaagtgatgt 13303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 932 - 1039
Target Start/End: Complemental strand, 21199953 - 21199846
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| ||||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |    
T  21199953 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcaac 21199855  T
Q  1031 ttctgaagt 1039  Q
    |||||||||    
T  21199854 ttctgaagt 21199846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 934 - 1044
Target Start/End: Complemental strand, 25097981 - 25097871
Alignment:
Q  934 aaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagctt 1032  Q
    |||||||||||||||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||| | |||| ||||||||| ||||| ||||||||    
T  25097981 aaggtgagaaaaacacaagaagggtggttgaa-ttatgtttgctttttcttcgttttctcctactgaaataactgatcagaagcagatagatttcagctt 25097883  T
Q  1033 ctgaagtgatgt 1044  Q
    ||||||||||||    
T  25097882 ctgaagtgatgt 25097871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 934 - 1044
Target Start/End: Complemental strand, 25157073 - 25156963
Alignment:
Q  934 aaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagctt 1032  Q
    |||||||||||||||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||| | |||| ||||||||| ||||| ||||||||    
T  25157073 aaggtgagaaaaacacaagaagggtggttgaa-ttatgtttgctttttcttcgttttctcctactgaaataactgatcagaagcagatagatttcagctt 25156975  T
Q  1033 ctgaagtgatgt 1044  Q
    ||||||||||||    
T  25156974 ctgaagtgatgt 25156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 616 - 683
Target Start/End: Complemental strand, 16727880 - 16727813
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttact 683  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  16727880 cgttttcttgattcaggaacgtggctgatagcgaggtacactttcagcgacccaaatgagggtttact 16727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 22000969 - 22000855
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||  || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||      
T  22000969 tgaaggtgagaaaaacacaagaaggggggttgag-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttat 22000871  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||||||| ||||||    
T  22000870 gcttctgaaatgatgt 22000855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 954 - 1044
Target Start/End: Complemental strand, 21207726 - 21207636
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||  |||| |||| |||| ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||| |||| ||||||    
T  21207726 ggggggtttgaattgtgttagcttcttcttcgttttctccttctgaagtcactgatcagaagcagatagagttcagcttatgaaatgatgt 21207636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 6513373 - 6513255
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||| ||  |||||||| || |||| |||||||||| |||||||| ||  |||||  ||||| ||| |||||||||||||||    
T  6513373 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgttggctttttcttcgttttctcttaagctgaaaacactgatcataagcaaatagagttc 6513275  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||||||||||||| ||||    
T  6513274 tgcttctgaagtgatttcca 6513255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 7746639 - 7746524
Alignment:
Q  932 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||| ||||| | ||||||||||| || ||||||||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  7746639 tgaaggtgagaaaaaacacaataaggggggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 7746541  T
Q  1028 agcttctgaagtgatgt 1044  Q
      |||||||||||||||    
T  7746540 tacttctgaagtgatgt 7746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 90375 - 90261
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctg-aagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||||  | ||||| |||| |||| |||||||||| |||||||||||  ||| ||  ||||| |||||||||||||||||||     
T  90375 tgaaggtgagaaaaacacaagaatgaggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaaacactgatcagaagcaaatagagttct 90277  T
Q  1029 gcttctgaagtgatgt 1044  Q
    ||||| ||||||||||    
T  90276 gcttccgaagtgatgt 90261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 31487403 - 31487517
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| | |||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  31487403 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttct 31487501  T
Q  1029 gcttctgaagtgatgt 1044  Q
      || |||||||||||    
T  31487502 aattttgaagtgatgt 31487517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 6498511 - 6498623
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||| ||||||||||| |||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| | ||||||| |||||||||      
T  6498511 tgaaggtgagtaaaacacaaga-gggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcagatagagttcta 6498608  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  6498609 cttctgaagtgatgt 6498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 19546471 - 19546358
Alignment:
Q  930 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||| |  |||||||||| || |||| | |||||||| |||| ||||||  |||||| ||||| ||||||||||||| ||||     
T  19546471 tctgaaggtgagaaaaacacagg--gggggttgaa-ttgtgttggttttttcttcgtttcctcctaagctgaagacactgatcagaagcaaatatagtta 19546375  T
Q  1028 agcttctgaagtgatgt 1044  Q
     ||||||||||||||||    
T  19546374 tgcttctgaagtgatgt 19546358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 30116816 - 30116702
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| ||||||| | ||||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| ||||||||| |    
T  30116816 tgaaggtgagaaaaacacaagaagggggggttaaattctgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttctg 30116717  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||||||||| |||||    
T  30116716 cttctgaagagatgt 30116702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 3246403 - 3246291
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||| |||||| | || | ||||||||| |||||||||      
T  3246403 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaactgaaat-acagatcagaagcagatagagttcta 3246306  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||||||||| |||||    
T  3246305 cttctgaagagatgt 3246291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21076125 - 21076011
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||| ||||||||||||||||| || |||||||| || |||| |||||||||| |||||||||||  ||||   ||||| ||||||||| || ||||||     
T  21076125 tgaatgtgagaaaaacacaagaaggagggttgaa-ttatgttagctttttcttcgttttctcctaagctgataacactgatcagaagcagattgagttct 21076027  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  21076026 acttctgaagtgatgt 21076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21100692 - 21100578
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||| |||||| |||||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  21100692 tgaaggtgagaaaagcacaagaaggggggttg-aattgtgttagttttttcttcattttctcctaagctgaaaacactgatcagaagcagatagagttcc 21100594  T
Q  1029 gcttctgaagtgatgt 1044  Q
     ||| |||||||||||    
T  21100593 acttttgaagtgatgt 21100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 938 - 1044
Target Start/End: Complemental strand, 23413913 - 23413804
Alignment:
Q  938 tgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    ||||||||||||||||  |||| |||||| || |||| |||||||||| |||||||||||  |||||  |||||  |||||| ||||||||||| ||||     
T  23413913 tgagaaaaacacaagaatggggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgaccagaagtaaatagagttctgcttt 23413815  T
Q  1034 tgaagtgatgt 1044  Q
    |||||||||||    
T  23413814 tgaagtgatgt 23413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 954 - 1044
Target Start/End: Original strand, 11993107 - 11993197
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||| || |||||||||||||||  |||||||||| || ||  ||||| |||| |||| ||||||||| ||||||||||||||||    
T  11993107 ggggggttgaa-ttgtgtttgctttttcttctttttctcctaactaaaaacactgatcaggagcagatagagttctgcttctgaagtgatgt 11993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 13546471 - 13546355
Alignment:
Q  931 ctgaaggtgagaaaaacacaagagggg--ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||| | |  ||||||| || ||||| ||||||||| ||||||| |||  |||||  || || ||||||||| ||||||||    
T  13546471 ctgaaggtgagaaaaacacaagaagagtgggttgaa-ttgtgtttactttttcttcgttttcttctaagctgaaaacaatgatcagaagcagatagagtt 13546373  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  13546372 ctacttctgaagtgatgt 13546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 995
Target Start/End: Complemental strand, 28465287 - 28465225
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||| |||||||||||||| |||||||| |||| |||| ||||||||||| ||||||||||    
T  28465287 tgaaggtaagaaaaacacaagaagggggttg-aattgtgttggctttttcttttttttctccta 28465225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 33932460 - 33932576
Alignment:
Q  932 tgaaggtgag-aaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    |||||||||| ||||||||||||  ||||||||||| || |||| ||||||||||| |||||| |||  |||||  ||||| ||||||||||||||| ||    
T  33932460 tgaaggtgaggaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttttttttcttctaagctgaaaacactgatcagaagcaaatagattt 33932558  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||| ||||||    
T  33932559 ctacttctgaaatgatgt 33932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 931 - 1044
Target Start/End: Complemental strand, 35932950 - 35932834
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtca-ctgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||||  ||| ||||| |||| |||| ||||||||||  |||||||||| ||||| | | | ||||||||||| ||||||||    
T  35932950 ctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgttagctttttcttctttttctcctatctgaaataagcagttcagaagcagatagagtt 35932852  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  ||||||||| |||||    
T  35932851 ctacttctgaagagatgt 35932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 37395362 - 37395476
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  | ||||||||  |||||  ||||| | ||||||| ||||| |||     
T  37395362 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttcttcttcttctcctaagctgaaaacactgattagaagcagatagaattct 37395460  T
Q  1029 gcttctgaagtgatgt 1044  Q
      ||||||||||||||    
T  37395461 atttctgaagtgatgt 37395476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 932 - 983
Target Start/End: Complemental strand, 26120760 - 26120710
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctt 983  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||    
T  26120760 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttctt 26120710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 684
Target Start/End: Complemental strand, 38921486 - 38921455
Alignment:
Q  653 acactttcagggacccaaatgagggtttactc 684  Q
    ||||||||||||||||||||||||||||||||    
T  38921486 acactttcagggacccaaatgagggtttactc 38921455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 8e-27; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 616 - 686
Target Start/End: Complemental strand, 36574030 - 36573960
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  36574030 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacctaaatgagtgtttactctt 36573960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 684
Target Start/End: Complemental strand, 26529576 - 26529508
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  26529576 cgttttcttgattcagggacgtgtctgatagcgaggtacactttcagggacccaaatgagggtttactc 26529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 21192767 - 21192654
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||| |||||||||||||  ||||||||||| || |||  |||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  21192767 tgaaggtgcgaaaaacacaagaagggggggttgaa-ttgtgtaagctttttcttcgttttctcctactgaagtcactgatcataagcagatagagttcag 21192669  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||| ||||    
T  21192668 cttctgaagtcatgt 21192654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 17025884 - 17025772
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||| ||||||||||||||||| ||||||||||| || |||| | |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||      
T  17025884 tgaaagtgagaaaaacacaagaaggggggttgaa-ttgtgttagatttttctttgttttctcctacttaagtcactgatcagaagcagatagagttcaat 17025786  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||| |||||||||    
T  17025785 ttctaaagtgatgt 17025772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 18614108 - 18614221
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||| ||   | |||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  18614108 tgaaggtgagaaaaacacaggaagtgagggttg-aattatgttagctttttcttcgttttctcctactgaagtcactgatcaaaagcagatagagttcag 18614206  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||||||| |||||||    
T  18614207 cttctgatgtgatgt 18614221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 12625430 - 12625318
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| || |||||||| || |||| | |||||||| ||||||||||| | ||||||||  ||||||||| |||||||||| |    
T  12625430 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagttttttcttcgttttctcctattaaagtcactcatcagaagcagatagagttcaac 12625332  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  12625331 ttctgaagtgatgt 12625318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 616 - 684
Target Start/End: Original strand, 26531083 - 26531151
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||    
T  26531083 cgttttcttgattcagggacgtgtctaatagcgaggtacactttcagggaccaaaatgagggtttactc 26531151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 26530567 - 26530500
Alignment:
Q  619 tttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26530567 tttcttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaggtttactctt 26530500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 7308986 - 7309099
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||||||| |||||||||| |||| |||| | |||||||| |||||||||| ||||||  ||||| ||||||||||||||| ||| |    
T  7308986 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggttttttcttcgttttctcctaactgaaaacactgatcagaagcaaatagaattctg 7309084  T
Q  1030 cttctgaagtgatgt 1044  Q
    ||||| |||||||||    
T  7309085 cttctaaagtgatgt 7309099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 616 - 686
Target Start/End: Original strand, 36575530 - 36575600
Alignment:
Q  616 cgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||||||| | |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  36575530 cgttttcttgatttaaggacgtgtctgatagcgaggtacactttcagggactcaaatgagggtttactctt 36575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 36575021 - 36574954
Alignment:
Q  619 tttcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactctt 686  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||    
T  36575021 tttcttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaagtttactctt 36574954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 22202764 - 22202648
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||  |||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||||| |    
T  22202764 tgaaggtgagaaaaacacaaggagggggttgaa-ttgtgttatctttttcttcgttttctcctaaactgaaaacactgatcataagcaaatagagttctg 22202666  T
Q  1030 cttctgaagtgatgtcca 1047  Q
    ||||||| ||||| ||||    
T  22202665 cttctgacgtgatttcca 22202648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 30892260 - 30892374
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| | ||||| |||  |||||  ||||| |||||||||||||||||||     
T  30892260 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgatttcttctaagctgaaaacactgatcagaagcaaatagagttct 30892358  T
Q  1029 gcttctgaagtgatgt 1044  Q
     ||||| |||||||||    
T  30892359 acttctaaagtgatgt 30892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 528 - 684
Target Start/End: Original strand, 49919606 - 49919762
Alignment:
Q  528 aaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgat 627  Q
    |||||||||||||| || |  ||||||| ||| |||||||| ||||| ||||||||| | |||||| ||||| ||||||        ||||||  |||||    
T  49919606 aaaaatggccagatcagtacagttaacgatcagttaacgttctggatgggaatgactgatggaagagactttgggggagtttttggtgcgtttcattgat 49919705  T
Q  628 tcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
     |||||| |||  ||||||||| | ||||||||| ||||||||||||| ||||||||    
T  49919706 ccagggaagtgactgatagcgatgcacactttcaaggacccaaatgagagtttactc 49919762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 14294166 - 14294052
Alignment:
Q  930 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||||||||||||||||||||| |||||||  |||| |||||||||||||||  ||||||||||  |||||  ||||| ||||||| | ||||||||     
T  14294166 tctgaaggtgagaaaaacacaagaagggggtt--aattgtgtttgctttttcttcattttctcctaagctgaaaacactgatcagaaggagatagagtta 14294069  T
Q  1028 agcttctgaagtgatgt 1044  Q
      ||||| |||||||||    
T  14294068 tacttctaaagtgatgt 14294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 25449469 - 25449357
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||| ||| ||  ||||||||| ||||||  ||||| ||||||||| ||||||||   |    
T  25449469 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctattttttctttttctcctaactgaaaacactgatcagaagcagatagagttatac 25449371  T
Q  1031 ttctgaagtgatgt 1044  Q
    ||||||||||||||    
T  25449370 ttctgaagtgatgt 25449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 928 - 1044
Target Start/End: Original strand, 22153017 - 22153135
Alignment:
Q  928 aatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagag 1024  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  |||||||||   |||||  |  || ||||||||| ||||||    
T  22153017 aatctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctccttagctgaaaactttgatcagaagcagatagag 22153115  T
Q  1025 ttcagcttctgaagtgatgt 1044  Q
    |||  |||||||||||||||    
T  22153116 ttctacttctgaagtgatgt 22153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 986 - 1041
Target Start/End: Original strand, 17017822 - 17017877
Alignment:
Q  986 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 1041  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  17017822 ttttcttctactgaagtcactattcagaagctgatagagttcagcttctgaagtga 17017877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 931 - 1044
Target Start/End: Original strand, 21983792 - 21983908
Alignment:
Q  931 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtca-ctgttcagaagcaaatagagtt 1026  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||| |||||||||  |||||||||| ||||| | | | ||||||||||| ||||||||    
T  21983792 ctgaaggtgagaaaaacacaagaacggggggttg-aattgtgttttctttttcttctttttctcctatctgaaataagcagttcagaagcagatagagtt 21983890  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  ||||||||| |||||    
T  21983891 ctacttctgaagagatgt 21983908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 930 - 1044
Target Start/End: Original strand, 1577042 - 1577158
Alignment:
Q  930 tctgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||| | || ||||||||||| || |||| | ||||||||  ||||||| ||  |||||  ||||| ||||||||| ||||||||    
T  1577042 tctgaaggtgagaaaaacatacgaaggggggttgaa-ttgtgttggttttttcttctttttctcttatgctgaaaacactgatcagaagcagatagagtt 1577140  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  1577141 ctacttctgaagtgatgt 1577158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 12283590 - 12283700
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| ||  |||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||| |||||| ||||||||      
T  12283590 tgaaggtgagaaaaacacaagaaggatgttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactg-tcataagcaagtagagttctc 12283687  T
Q  1030 cttctgaagtgat 1042  Q
    |||||||| ||||    
T  12283688 cttctgaaatgat 12283700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 932 - 1025
Target Start/End: Complemental strand, 20959911 - 20959819
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    |||||||||||||||||||  |||||||||| |||| |||| | |||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  20959911 tgaaggtgagaaaaacaca--aggggggttg-aattgtgttagttttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 20959819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 35062625 - 35062564
Alignment:
Q  623 ttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
    |||||||||||| |||||||||| ||||||  ||||| ||| |||||||||| |||||||||    
T  35062625 ttgattcagggatgtggttgataacgaggtgaacttttaggaacccaaatgaaggtttactc 35062564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 975 - 1047
Target Start/End: Complemental strand, 22202600 - 22202526
Alignment:
Q  975 ctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    ||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||||| |||||||| ||||| ||||    
T  22202600 ctttttcttcgttttctcctaaactgaaaacactgatcataagcaaatagagttctgcttctgacgtgatttcca 22202526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 22428190 - 22428108
Alignment:
Q  964 aattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| ||||| ||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||| ||||||    
T  22428190 aattgtgtttactttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaaatgatgt 22428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 2833856 - 2833965
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||| |||||    |||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||| ||      
T  2833856 tgaaggtgagaaacacaca----gggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagctcta 2833950  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  2833951 cttctgaagtgatgt 2833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 930 - 964
Target Start/End: Original strand, 22637456 - 22637490
Alignment:
Q  930 tctgaaggtgagaaaaacacaagaggggggttgaa 964  Q
    |||||||||||||||||||||||| ||||||||||    
T  22637456 tctgaaggtgagaaaaacacaagaagggggttgaa 22637490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 937 - 1047
Target Start/End: Complemental strand, 33257247 - 33257135
Alignment:
Q  937 gtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    |||||||||||||||| ||||| |||| |||| |||| |||||||||| | |||||||||  |||||  ||| | ||||||||||||| ||||  ||||     
T  33257247 gtgagaaaaacacaagaaggggagttg-aattgtgttagctttttcttcgctttctcctaagctgaaaacaccgatcagaagcaaatatagttatgcttt 33257149  T
Q  1034 tgaagtgatgtcca 1047  Q
    ||||||||| ||||    
T  33257148 tgaagtgatttcca 33257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 937 - 1047
Target Start/End: Complemental strand, 33277419 - 33277307
Alignment:
Q  937 gtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    |||||||||||||||| ||||| |||| |||| |||| |||||||||| | |||||||||  |||||  ||| | ||||||||||||| ||||  ||||     
T  33277419 gtgagaaaaacacaagaaggggagttg-aattgtgttagctttttcttcgctttctcctaagctgaaaacaccgatcagaagcaaatatagttatgcttt 33277321  T
Q  1034 tgaagtgatgtcca 1047  Q
    ||||||||| ||||    
T  33277320 tgaagtgatttcca 33277307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Complemental strand, 39194974 - 39194924
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  39194974 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 39194924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 685 - 723
Target Start/End: Original strand, 40908503 - 40908541
Alignment:
Q  685 ttcaaactattttcatcttcctaaagcgatacacttatg 723  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  40908503 ttcaaactcttttcatcttcctaaagcgaaacacttatg 40908541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 995 - 1044
Target Start/End: Original strand, 20908689 - 20908738
Alignment:
Q  995 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    ||||||||||||| |||||| |  ||||| ||||||||||||||||||||    
T  20908689 actgaagtcactgctcagaacctgatagacttcagcttctgaagtgatgt 20908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 942 - 1044
Target Start/End: Original strand, 38281569 - 38281672
Alignment:
Q  942 aaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagt 1039  Q
    |||||||||||| |||||||| | || |||| ||||||||||  ||||||||||  |||||  ||||| |||||| || ||| |||||  ||||||||||    
T  38281569 aaaaacacaagaagggggttgga-ttgtgttggctttttcttccttttctcctaagctgaaaacactgatcagaaacagatatagttctacttctgaagt 38281667  T
Q  1040 gatgt 1044  Q
    |||||    
T  38281668 gatgt 38281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 941 - 1044
Target Start/End: Original strand, 2403 - 2506
Alignment:
Q  941 gaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagt 1039  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| || |||    
T  2403 gaaaaacacaagaaggggggttg-aattgtgtttgctttttctttgttttcttctactgaagtccctgatcagaagcagatagagttcagcttatgtagt 2501  T
Q  1040 gatgt 1044  Q
    |||||    
T  2502 gatgt 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 940 - 1039
Target Start/End: Original strand, 73736 - 73835
Alignment:
Q  940 agaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagt 1039  Q
    |||||||||||||| ||||| |  |||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||| |||||||||| ||||||||||    
T  73736 agaaaaacacaagaagggggattgaattttgtttactttttcttcgttttctcctactgaaatcactgatcaaaagcagatagagttcaacttctgaagt 73835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1016
Target Start/End: Original strand, 517 - 602
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 1016  Q
    |||||||||||||||||||||| |||||| |  |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  517 tgaaggtgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctcctactgaagtcactgatcagaagc 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1016
Target Start/End: Complemental strand, 894 - 809
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 1016  Q
    |||||||||||||||||||||| |||||| |  |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  894 tgaaggtgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctcctactgaagtcactgatcagaagc 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 932 - 1036
Target Start/End: Original strand, 80560 - 80664
Alignment:
Q  932 tgaaggtgagaaaaa-cacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  80560 tgaaggtgagaaaaaacacaagaagggggtt-aaattgtgttagctttttcttcgttttctcctactgaagtcactgatcagatgcagatagaattcagc 80658  T
Q  1031 ttctga 1036  Q
     |||||    
T  80659 atctga 80664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 24689 - 24576
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 1029  Q
    ||||||||||||||||| ||| | |||||||| |||| |||||||| ||||||  ||||||||| ||||||  ||||  ||||||||| |||||| ||      
T  24689 tgaaggtgagaaaaacataagaatgggggttg-aattatgtttgctctttcttctttttctcctaactgaaaacactaatcagaagcagatagagctcta 24591  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  24590 cttctgaagtgatgt 24576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 934 - 1044
Target Start/End: Original strand, 5372 - 5483
Alignment:
Q  934 aaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcag-aagcaaatagagttcagct 1031  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||||| ||| |||| ||||||| |||||| |||| ||| | |||||||||||||    
T  5372 aaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttatctcatactgaaatcactgatcagaaagaagatagagttcagct 5470  T
Q  1032 tctgaagtgatgt 1044  Q
    |||||||||||||    
T  5471 tctgaagtgatgt 5483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1041
Target Start/End: Original strand, 1014 - 1123
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||| |||||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||||||||||  |||||| ||  |||||| || |    
T  1014 tgaaggtgagcaaaacacaagaaggggggttg-aattgtgtttgatttttcttcgttttctcctactgaagtcactagtcagaatcagttagagtacaac 1112  T
Q  1031 ttctgaagtga 1041  Q
    |||||||||||    
T  1113 ttctgaagtga 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 2e-18; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 931 - 1034
Target Start/End: Complemental strand, 245167 - 245064
Alignment:
Q  931 ctgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||| |||||| |||| |||||| || |||| ||||||| ||| |||| ||||||||||||||||| ||||||| | |||||||||||    
T  245167 ctgaaggtgagaaaaatacaagaaggggagttgaa-ttctgttagctttttatttattttttcctactgaagtcactgatcagaagtagatagagttcag 245069  T
Q  1030 cttct 1034  Q
    |||||    
T  245068 cttct 245064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 932 - 1047
Target Start/End: Complemental strand, 378466 - 378348
Alignment:
Q  932 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||| ||||||||||||||||| |  ||||||||| || |||| |||||||||| |||||||||||  |||||  ||||  |||||||||||||||||||    
T  378466 tgaaagtgagaaaaacacaagaagaaggggttgaa-ttgtgttagctttttcttcgttttctcctaatctgaaaacactaatcagaagcaaatagagttc 378368  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||||||||||||| ||||    
T  378367 tgcttctgaagtgatttcca 378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 210603 - 210715
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 1030  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  |    
T  210603 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttcttgtttttctcctaactgaaaatacagatcagaagcagatagagttctac 210701  T
Q  1031 ttctgaagtgatgt 1044  Q
    |||||||| |||||    
T  210702 ttctgaagagatgt 210715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 929 - 1044
Target Start/End: Original strand, 2163 - 2280
Alignment:
Q  929 atctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 1025  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||    
T  2163 atctgaaggtgagaaaaacacaagaagtggggttg-aattgtgttttctttttcttctttttctcctaagctgaatacactgatcagaagcagatagagt 2261  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  |||||||||||||||    
T  2262 tctacttctgaagtgatgt 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 48; Significance: 7e-18; HSPs: 4)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 549 - 684
Target Start/End: Complemental strand, 4471 - 4336
Alignment:
Q  549 gttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcg 648  Q
    ||||||| ||| |||||||||||||| ||||||||||| |||||| ||||| ||||||        ||||||  |||||  |||||||||| ||||||||    
T  4471 gttaacgatcaattaacgttttggatgggaatgactaatggaagagactttgggggagtttttggtgcgtttcattgatctagggacgtggctgatagcg 4372  T
Q  649 aggtacactttcagggacccaaatgagggtttactc 684  Q
    |  |||||||| ||||| ||||| ||||||||||||    
T  4371 atatacacttttagggatccaaacgagggtttactc 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 549 - 684
Target Start/End: Complemental strand, 12211 - 12076
Alignment:
Q  549 gttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgattcagggacgtggttgatagcg 648  Q
    ||||||| ||| |||||||||||||| ||||||||||| |||||| ||||| ||||||        ||||||  |||||  |||||||||| ||||||||    
T  12211 gttaacgatcaattaacgttttggatgggaatgactaatggaagagactttgggggagtttttggtgcgtttcattgatctagggacgtggctgatagcg 12112  T
Q  649 aggtacactttcagggacccaaatgagggtttactc 684  Q
    |  |||||||| ||||| ||||| ||||||||||||    
T  12111 atatacacttttagggatccaaacgagggtttactc 12076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 528 - 684
Target Start/End: Original strand, 5985 - 6141
Alignment:
Q  528 aaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgat 627  Q
    |||||||| ||||| ||||  ||||| | ||| |||| ||||||||  |||||||||||| ||||| | ||| ||||||        ||||||  || ||    
T  5985 aaaaatggtcagatcagcacagttaatgatcagttaatgttttggacgggaatgactaacagaagagattttgggggagtttttggtgcgtttcattaat 6084  T
Q  628 tcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
      ||||||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  6085 ctagggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactc 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 528 - 684
Target Start/End: Original strand, 13725 - 13881
Alignment:
Q  528 aaaaatggccagattagcagtgttaacgctcacttaacgttttggatcggaatgactaacggaagacactttcggggagnnnnnnnngcgttttcttgat 627  Q
    |||||||| ||||| ||||  ||||| | ||| |||| ||||||||  |||||||||||| ||||| | ||| ||||||        ||||||  || ||    
T  13725 aaaaatggtcagatcagcacagttaatgatcagttaatgttttggacgggaatgactaacagaagagattttgggggagtttttggtgcgtttcattaat 13824  T
Q  628 tcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 684  Q
      ||||||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  13825 ctagggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactc 13881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 7e-18; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1040
Target Start/End: Original strand, 28976 - 29079
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    |||||||||||||||||||||| ||||||| ||||| || || ||||||||||     |||||| ||||||||||||||  || ||||||||||||||||    
T  28976 tgaaggtgagaaaaacacaagaagggggtt-aaattgtggtttctttttctttc----ctcctattgaagtcactgttctaaatcaaatagagttcagct 29070  T
Q  1032 tctgaagtg 1040  Q
    |||||||||    
T  29071 tctgaagtg 29079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 934 - 1042
Target Start/End: Complemental strand, 20376 - 20267
Alignment:
Q  934 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 1031  Q
    ||||||||||||||| |||| |||||||| |||| |||| | |||||||| |||||||||||  || ||   |||| ||||||| ||||||||||| |||    
T  20376 aaggtgagaaaaacaaaagaagggggttg-aattgtgttagttttttcttcgttttctcctaagctaaaaaaactgatcagaagtaaatagagttctgct 20278  T
Q  1032 tctgaagtgat 1042  Q
    |||||||||||    
T  20277 tctgaagtgat 20267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 110509 - 110392
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-----ggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||||||||||||||||     ||||||||| |||| |||| | |||||||| |||||||||| ||||||   || | ||||||||| |||||||    
T  110509 tgaaggtgagaaaaacacaagaaggagggggggttg-aattgtgttggttttttcttcgttttctcctaactgaaaatacagatcagaagcagatagagt 110411  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||  ||||||||| |||||    
T  110410 tctacttctgaagagatgt 110392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 9098 - 9209
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||  |||||||||| || |||  |||||||||| |||||||||||  |||||  ||||| ||||||||||||||| | | |    
T  9098 tgaaggtgagaaaaacacaag--gggggttgaa-ttgtgtaagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagaatactg 9194  T
Q  1030 cttctgaagtgatgt 1044  Q
    |||||||||||||||    
T  9195 cttctgaagtgatgt 9209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 817 - 932
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||  |||| ||||  ||||||||| |||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  817 tgaaggtgagaaaaacacaagaaggggggtttgaattgtgttaactttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagaattct 916  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  917 acttctgaagtgatgt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 1044
Target Start/End: Original strand, 25630 - 25739
Alignment:
Q  938 tgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 1033  Q
    |||||||| |||||||  ||||||||||| || ||||| ||||||||| |||||||||||  |||||  ||||| |||||||||||||||||||  ||||    
T  25630 tgagaaaagcacaagaagggggggttgaa-ttgtgtttactttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttc 25728  T
Q  1034 tgaagtgatgt 1044  Q
    |||||||||||    
T  25729 tgaagtgatgt 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 7623 - 7509
Alignment:
Q  932 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||  ||||| ||||||||| |||||||||     
T  7623 tgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaacactgatcagaagcagatagagttct 7525  T
Q  1029 gcttctgaagtgatgt 1044  Q
     |||||||||||||||    
T  7524 acttctgaagtgatgt 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 2987 - 2870
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg------ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagt 1025  Q
    ||||||||||||||||||||||||||||      ||||| || |||| |||||||||| ||||||||||||||||||||||| | | ||||| ||| | |    
T  2987 tgaaggtgagaaaaacacaagaggggggggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgataataagcagatataat 2889  T
Q  1026 tcagcttctgaagtgatgt 1044  Q
    ||| ||||||| |||||||    
T  2888 tcaacttctgaggtgatgt 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 931 - 1047
Target Start/End: Original strand, 2650 - 2767
Alignment:
Q  931 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||  ||| | ||||||||| || ||||||     
T  2650 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttcattttctcctaactgaaaacacagatcagaagcagattgagttct 2748  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
     ||||||||| ||||||||    
T  2749 acttctgaagagatgtcca 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1043
Target Start/End: Original strand, 4887 - 4998
Alignment:
Q  932 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 1029  Q
    |||||||||||||||||||||| |||||  ||||| || ||||  |||||| |  ||||||||||||||||||||||| ||||||| | ||| | |||||    
T  4887 tgaaggtgagaaaaacacaagaagggggagttgaa-ttgtgttaactttttgtc-gttttctcctactgaagtcactgatcagaaggagatataattcag 4984  T
Q  1030 cttctgaagtgatg 1043  Q
    ||||||||||||||    
T  4985 cttctgaagtgatg 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 36626 - 36738
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||  ||| ||||||||| |||||     
T  36626 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactaatcataagcaaataaagttct 36724  T
Q  1029 gcttctgaagtgat 1042  Q
    | ||||||||||||    
T  36725 gtttctgaagtgat 36738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 932 - 1042
Target Start/End: Original strand, 134686 - 134798
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||  ||| ||||||||| |||||     
T  134686 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactaatcataagcaaataaagttct 134784  T
Q  1029 gcttctgaagtgat 1042  Q
    | ||||||||||||    
T  134785 gtttctgaagtgat 134798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 932 - 1040
Target Start/End: Original strand, 7866 - 7976
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||| ||| || ||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  7866 tgaaggtgagaaaaacataagaagaggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttcc 7964  T
Q  1029 gcttctgaagtg 1040  Q
     |||||||||||    
T  7965 acttctgaagtg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 954 - 1042
Target Start/End: Complemental strand, 2905 - 2816
Alignment:
Q  954 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 1042  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||||  ||||||||||||||||||| ||||||||||||||    
T  2905 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 31786 - 31903
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  ||  |  ||||| ||||||||||||| |||||     
T  31786 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagcttgaaacactgatcagaagcaaataaagttct 31884  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||| || |||| ||||    
T  31885 gcttctaaattgatttcca 31903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 48512 - 48630
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    |||||| |||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||  ||| |  ||||| |||||||| |||||||||     
T  48512 tgaaggagagaaaaacacaagaagggggggttg-aattgtgttagctttttcttcattttctcctaagctggaaacactgatcagaagcgaatagagttt 48610  T
Q  1028 agcttctgaagtgatgtcca 1047  Q
     |||| ||||||||| ||||    
T  48611 tgcttttgaagtgatttcca 48630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 932 - 1047
Target Start/End: Original strand, 7076 - 7193
Alignment:
Q  932 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 1028  Q
    |||||||||||||||||||||| ||||||||||| | | |||  |||||||||  ||||||||||  |||||  ||||| ||||||||||||||||||      
T  7076 tgaaggtgagaaaaacacaagaaggggggttgaactct-gttaactttttcttatttttctcctaagctgaaaacactgatcagaagcaaatagagttat 7174  T
Q  1029 gcttctgaagtgatgtcca 1047  Q
    |||||| ||||||| ||||    
T  7175 gcttcttaagtgatttcca 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1044
Target Start/End: Complemental strand, 19569 - 19454
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 1027  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| |||||||||| |||||||| ||  |||||  ||||  ||||||||| |||||||||    
T  19569 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttggctttttcttcgttttctcttatgctgaaaacactaatcagaagcagatagagttc 19471  T
Q  1028 agcttctgaagtgatgt 1044  Q
      ||||||| |||||||    
T  19470 tacttctgacgtgatgt 19454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 964 - 1044
Target Start/End: Complemental strand, 44745 - 44665
Alignment:
Q  964 aattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 1044  Q
    |||| |||| |||||||||| |||||||||||||||| |||||| ||| ||||| |||||||||  || || |||||||||    
T  44745 aattgtgttagctttttcttcgttttctcctactgaaatcactgatcaaaagcagatagagttccactgctaaagtgatgt 44665  T

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Target: scaffold0498 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1016
Target Start/End: Complemental strand, 1126 - 1037
Alignment:
Q  932 tgaaggtgagaaaaacacaaga---gggg---ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 1016  Q
    ||||||||||||||||||||||   ||||   ||||||| || |||| |||||||||| |||||||||||||||||||||| || ||||||    
T  1126 tgaaggtgagaaaaacacaagaagcggggagaggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactatttagaagc 1037  T

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Target: scaffold0479 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1044
Target Start/End: Original strand, 9158 - 9277
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggg------gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaataga 1023  Q
    |||||||||||||||||||||| ||      |||||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||    
T  9158 tgaaggtgagaaaaacacaagaaggcctagggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagataga 9256  T
Q  1024 gttcagcttctgaagtgatgt 1044  Q
     |||  |||||||||||||||    
T  9257 attctacttctgaagtgatgt 9277  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 930 - 1044
Target Start/End: Complemental strand, 868 - 752
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 1026  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||  |||||||||   |||||||||  |||||  ||||| ||||||||| || || ||    
T  868 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttaactttttcttctatttctcctaagctgaaaacactgatcagaagcagatggaatt 770  T
Q  1027 cagcttctgaagtgatgt 1044  Q
    |  |||||||||||||||    
T  769 ctacttctgaagtgatgt 752  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 938 - 1044
Target Start/End: Original strand, 14317 - 14425
Alignment:
Q  938 tgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttct 1034  Q
    ||||||||||| ||||  |||||||||| || |||| |||||||||| |||||||||||  |||||  || || ||| ||||||||||||||| |||| |    
T  14317 tgagaaaaacataagaatgggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaatgatcaaaagcaaatagagttctgctttt 14415  T
Q  1035 gaagtgatgt 1044  Q
    ||||||||||    
T  14416 gaagtgatgt 14425  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 932 - 991
Target Start/End: Complemental strand, 21849 - 21790
Alignment:
Q  932 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttct 991  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||| |||||||    
T  21849 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttcgttttct 21790  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1004 - 1047
Target Start/End: Original strand, 14238 - 14281
Alignment:
Q  1004 actgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  14238 actgatcagaagcaaatagagttcggcttctgaagtgatttcca 14281  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1004 - 1047
Target Start/End: Original strand, 1280 - 1323
Alignment:
Q  1004 actgttcagaagcaaatagagttcagcttctgaagtgatgtcca 1047  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  1280 actgatcagaagcaaatagagttcggcttctgaagtgatttcca 1323  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 1017
Target Start/End: Original strand, 211549 - 211643
Alignment:
Q  926 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagca 1017  Q
    ||||| ||||||||||||||||||||| ||||||| |  |||| |||| ||||||| || |||||||||||  |||||  ||||| |||||||||    
T  211549 agaatttgaaggtgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaaacactgatcagaagca 211643  T

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Target: scaffold1539 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 1558 - 1608
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  1558 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 1608  T

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Target: scaffold0738 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Complemental strand, 5673 - 5623
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  5673 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 5623  T

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Target: scaffold0525 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 982
Target Start/End: Original strand, 7054 - 7103
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 982  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  7054 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 7103  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 932 - 995
Target Start/End: Complemental strand, 26564 - 26500
Alignment:
Q  932 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 995  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||    
T  26564 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttagctttttcttctttttctccta 26500  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 995 - 1041
Target Start/End: Original strand, 267977 - 268023
Alignment:
Q  995 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 1041  Q
    |||||||||||||||||||| |  ||| |||||||||||||||||||    
T  267977 actgaagtcactgttcagaacctgataaagttcagcttctgaagtga 268023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 982
Target Start/End: Complemental strand, 7230 - 7178
Alignment:
Q  930 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  7230 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 7178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 965
Target Start/End: Complemental strand, 16989 - 16956
Alignment:
Q  932 tgaaggtgagaaaaacacaagaggggggttgaaa 965  Q
    ||||||||||||||||| ||||||||||||||||    
T  16989 tgaaggtgagaaaaacaaaagaggggggttgaaa 16956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 928 - 982
Target Start/End: Complemental strand, 37611 - 37556
Alignment:
Q  928 aatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 982  Q
    ||||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  37611 aatctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 37556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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