View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6900_low_67 (Length: 228)

Name: NF6900_low_67
Description: NF6900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6900_low_67
NF6900_low_67
[»] chr1 (23 HSPs)
chr1 (119-228)||(23927974-23928083)
chr1 (123-228)||(14783303-14783408)
chr1 (1-78)||(1899576-1899653)
chr1 (1-78)||(2833885-2833962)
chr1 (1-78)||(14294055-14294132)
chr1 (1-70)||(23037296-23037365)
chr1 (8-78)||(22428118-22428188)
chr1 (1-78)||(1577078-1577155)
chr1 (1-78)||(38281592-38281669)
chr1 (1-69)||(2266324-2266392)
chr1 (1-119)||(25449360-25449470)
chr1 (1-68)||(29215039-29215106)
chr1 (1-78)||(30892294-30892371)
chr1 (1-78)||(36133440-36133517)
chr1 (1-118)||(22465585-22465696)
chr1 (19-78)||(20959821-20959880)
chr1 (8-121)||(22202661-22202767)
chr1 (79-116)||(25398671-25398708)
chr1 (79-120)||(42283838-42283879)
chr1 (1-60)||(14264201-14264261)
chr1 (77-120)||(19171206-19171250)
chr1 (82-118)||(23053577-23053613)
chr1 (92-120)||(43283475-43283503)
[»] chr8 (26 HSPs)
chr8 (119-228)||(17705698-17705807)
chr8 (1-118)||(45539334-45539445)
chr8 (1-78)||(23264477-23264554)
chr8 (1-78)||(30422280-30422357)
chr8 (1-75)||(16206458-16206532)
chr8 (1-78)||(17796641-17796718)
chr8 (1-78)||(18121982-18122059)
chr8 (8-78)||(23185603-23185673)
chr8 (1-59)||(31445345-31445403)
chr8 (1-60)||(9319814-9319873)
chr8 (79-118)||(27739070-27739109)
chr8 (77-118)||(9767971-9768012)
chr8 (1-78)||(15336937-15337013)
chr8 (1-78)||(15426002-15426078)
chr8 (1-78)||(15517306-15517382)
chr8 (1-78)||(17007534-17007611)
chr8 (8-119)||(22672967-22673070)
chr8 (1-78)||(25163295-25163372)
chr8 (19-78)||(21932099-21932159)
chr8 (1-75)||(19942463-19942536)
chr8 (1-78)||(12758592-12758669)
chr8 (1-78)||(17541339-17541416)
chr8 (1-78)||(19153248-19153325)
chr8 (79-119)||(40846325-40846366)
chr8 (77-122)||(18157665-18157712)
chr8 (79-120)||(19957258-19957301)
[»] chr4 (25 HSPs)
chr4 (121-228)||(36470881-36470988)
chr4 (1-118)||(23749715-23749830)
chr4 (1-119)||(22676365-22676476)
chr4 (1-120)||(24628702-24628816)
chr4 (1-78)||(3792560-3792637)
chr4 (1-78)||(14905130-14905207)
chr4 (1-78)||(29120595-29120672)
chr4 (1-78)||(54679088-54679165)
chr4 (1-119)||(44397402-44397513)
chr4 (1-68)||(17246847-17246914)
chr4 (1-78)||(56033755-56033832)
chr4 (1-78)||(12599982-12600059)
chr4 (1-78)||(19883920-19883997)
chr4 (10-120)||(14605720-14605825)
chr4 (1-118)||(10071693-10071808)
chr4 (1-78)||(13576953-13577030)
chr4 (79-120)||(14115998-14116039)
chr4 (1-58)||(55379559-55379616)
chr4 (27-118)||(10072079-10072168)
chr4 (1-57)||(55731078-55731134)
chr4 (79-118)||(22089478-22089517)
chr4 (1-68)||(37436335-37436402)
chr4 (77-120)||(11514457-11514501)
chr4 (77-120)||(19570438-19570482)
chr4 (77-118)||(20649630-20649673)
[»] chr2 (22 HSPs)
chr2 (1-118)||(45087791-45087902)
chr2 (1-78)||(24851466-24851543)
chr2 (1-119)||(28702018-28702130)
chr2 (2-78)||(13964778-13964854)
chr2 (1-118)||(39038434-39038545)
chr2 (1-78)||(25188631-25188708)
chr2 (1-118)||(21537981-21538092)
chr2 (1-60)||(6574958-6575017)
chr2 (1-118)||(22188901-22189013)
chr2 (79-119)||(7687307-7687347)
chr2 (1-75)||(28712500-28712574)
chr2 (1-78)||(6391895-6391972)
chr2 (1-78)||(24575261-24575338)
chr2 (1-78)||(31801679-31801756)
chr2 (1-78)||(40780538-40780615)
chr2 (79-119)||(21549185-21549225)
chr2 (1-77)||(23234183-23234259)
chr2 (79-118)||(28790137-28790176)
chr2 (1-58)||(10010544-10010601)
chr2 (1-78)||(20569543-20569620)
chr2 (1-78)||(24778560-24778637)
chr2 (79-116)||(31968640-31968677)
[»] chr6 (22 HSPs)
chr6 (1-78)||(10631366-10631443)
chr6 (1-118)||(21234350-21234462)
chr6 (1-78)||(13435114-13435191)
chr6 (1-78)||(17380792-17380869)
chr6 (1-78)||(21624321-21624398)
chr6 (1-78)||(20113476-20113554)
chr6 (1-78)||(15532473-15532550)
chr6 (1-78)||(32543492-32543569)
chr6 (1-78)||(24717660-24717739)
chr6 (1-118)||(22801339-22801449)
chr6 (1-118)||(9717020-9717132)
chr6 (1-78)||(14101287-14101364)
chr6 (1-78)||(15301447-15301524)
chr6 (1-78)||(20731549-20731626)
chr6 (1-78)||(16528544-16528621)
chr6 (1-78)||(18377656-18377733)
chr6 (1-76)||(13601398-13601473)
chr6 (79-118)||(23602420-23602459)
chr6 (1-78)||(19085361-19085438)
chr6 (77-118)||(33353158-33353199)
chr6 (77-120)||(12352930-12352974)
chr6 (77-120)||(21034234-21034278)
[»] chr5 (23 HSPs)
chr5 (1-78)||(7746527-7746604)
chr5 (9-118)||(33021845-33021957)
chr5 (1-78)||(6498543-6498620)
chr5 (8-78)||(33932496-33932566)
chr5 (1-120)||(37395360-37395473)
chr5 (1-78)||(13546358-13546435)
chr5 (1-78)||(13736937-13737014)
chr5 (79-122)||(26120721-26120764)
chr5 (1-118)||(30742135-30742245)
chr5 (1-76)||(31117106-31117181)
chr5 (1-60)||(42242854-42242913)
chr5 (1-75)||(21076014-21076088)
chr5 (1-78)||(9399444-9399521)
chr5 (1-78)||(11993118-11993194)
chr5 (1-78)||(21100581-21100658)
chr5 (1-78)||(23413807-23413884)
chr5 (1-50)||(23880269-23880318)
chr5 (27-78)||(22000884-22000935)
chr5 (1-78)||(6513261-6513338)
chr5 (13-78)||(31487437-31487502)
chr5 (79-120)||(39799714-39799755)
chr5 (79-127)||(28465248-28465296)
chr5 (77-118)||(35544010-35544053)
[»] chr3 (45 HSPs)
chr3 (1-78)||(1241924-1242001)
chr3 (1-78)||(14968600-14968677)
chr3 (1-78)||(40799121-40799198)
chr3 (3-78)||(14954641-14954716)
chr3 (8-119)||(50299430-50299539)
chr3 (1-78)||(20628311-20628388)
chr3 (1-78)||(29952286-29952363)
chr3 (1-78)||(30001440-30001517)
chr3 (121-228)||(23646517-23646625)
chr3 (1-120)||(12727085-12727198)
chr3 (1-78)||(6089959-6090036)
chr3 (1-78)||(18122497-18122574)
chr3 (1-78)||(31302580-31302657)
chr3 (1-78)||(38178494-38178571)
chr3 (1-78)||(49554359-49554436)
chr3 (1-78)||(52283026-52283103)
chr3 (1-119)||(11189190-11189301)
chr3 (29-118)||(15902393-15902475)
chr3 (1-60)||(47206912-47206971)
chr3 (1-118)||(14393844-14393956)
chr3 (1-119)||(11222741-11222856)
chr3 (1-78)||(41494234-41494310)
chr3 (1-53)||(11222052-11222104)
chr3 (77-118)||(14006879-14006920)
chr3 (79-119)||(11073623-11073663)
chr3 (1-69)||(19885927-19885995)
chr3 (1-68)||(22804870-22804937)
chr3 (1-60)||(47406266-47406325)
chr3 (13-118)||(52919622-52919720)
chr3 (8-78)||(13939127-13939197)
chr3 (1-75)||(19889788-19889862)
chr3 (1-59)||(33582469-33582527)
chr3 (1-58)||(2782737-2782794)
chr3 (1-58)||(2783127-2783184)
chr3 (79-120)||(7833636-7833677)
chr3 (79-120)||(7833719-7833760)
chr3 (77-118)||(22128299-22128340)
chr3 (1-78)||(49643613-49643690)
chr3 (1-50)||(53057574-53057623)
chr3 (59-118)||(2025293-2025352)
chr3 (79-119)||(11067441-11067481)
chr3 (77-120)||(14310875-14310919)
chr3 (79-119)||(16305963-16306003)
chr3 (82-118)||(16881444-16881480)
chr3 (1-45)||(24776361-24776405)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-118)||(2166-2277)
[»] chr7 (42 HSPs)
chr7 (1-119)||(13879331-13879449)
chr7 (1-78)||(4493773-4493850)
chr7 (1-78)||(14186915-14186992)
chr7 (1-78)||(15467144-15467221)
chr7 (1-78)||(16546189-16546266)
chr7 (1-78)||(16619396-16619473)
chr7 (1-78)||(21284226-21284303)
chr7 (1-78)||(28623205-28623282)
chr7 (1-78)||(48237687-48237764)
chr7 (8-78)||(16557469-16557539)
chr7 (8-78)||(16608123-16608193)
chr7 (1-78)||(13027803-13027880)
chr7 (1-78)||(19328862-19328939)
chr7 (1-78)||(21691653-21691730)
chr7 (1-78)||(35954763-35954840)
chr7 (1-118)||(13473339-13473448)
chr7 (8-118)||(2499223-2499327)
chr7 (1-118)||(11792065-11792176)
chr7 (1-118)||(13259295-13259406)
chr7 (10-78)||(30025163-30025231)
chr7 (1-68)||(13034705-13034772)
chr7 (8-120)||(33604097-33604203)
chr7 (1-78)||(9710686-9710763)
chr7 (8-78)||(22580113-22580183)
chr7 (77-118)||(8932954-8932995)
chr7 (1-78)||(13731528-13731605)
chr7 (1-78)||(16315389-16315466)
chr7 (1-78)||(41843274-41843351)
chr7 (1-121)||(33692574-33692689)
chr7 (4-118)||(1292247-1292355)
chr7 (79-118)||(8182153-8182192)
chr7 (79-118)||(9761886-9761925)
chr7 (77-119)||(4412889-4412931)
chr7 (79-117)||(9802280-9802318)
chr7 (1-120)||(10884022-10884135)
chr7 (1-116)||(13261527-13261636)
chr7 (8-78)||(13645680-13645750)
chr7 (1-78)||(23280827-23280905)
chr7 (1-78)||(12175186-12175263)
chr7 (1-78)||(12367609-12367686)
chr7 (1-78)||(13302090-13302167)
chr7 (1-78)||(29936197-29936274)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-78)||(9197-9274)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-78)||(7512-7588)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-78)||(852-929)
[»] scaffold0163 (2 HSPs)
scaffold0163 (1-78)||(25659-25736)
scaffold0163 (77-119)||(28853-28897)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-78)||(111403-111480)
[»] scaffold0315 (1 HSPs)
scaffold0315 (2-78)||(7900-7976)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-78)||(17560-17639)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-78)||(755-832)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-69)||(102795-102863)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-78)||(83591-83667)
scaffold0009 (27-78)||(83527-83579)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-120)||(211553-211658)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-78)||(10910-10988)
scaffold0161 (1-78)||(15574-15652)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-78)||(2817-2894)
[»] scaffold0525 (1 HSPs)
scaffold0525 (77-118)||(7054-7095)
[»] scaffold0330 (1 HSPs)
scaffold0330 (19-68)||(492-541)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-78)||(158377-158454)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-58)||(59905-59962)
[»] scaffold0004 (4 HSPs)
scaffold0004 (8-119)||(210602-210705)
scaffold0004 (79-123)||(219431-219476)
scaffold0004 (1-78)||(378354-378431)
scaffold0004 (79-118)||(245126-245166)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-69)||(7119-7187)
[»] scaffold0043 (1 HSPs)
scaffold0043 (79-118)||(2627-2666)
[»] scaffold0290 (1 HSPs)
scaffold0290 (8-78)||(19464-19534)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-75)||(24579-24652)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-70)||(9137-9206)
[»] scaffold1747 (1 HSPs)
scaffold1747 (78-119)||(516-559)
[»] scaffold1745 (1 HSPs)
scaffold1745 (78-119)||(852-895)
[»] scaffold0607 (1 HSPs)
scaffold0607 (10-78)||(5364-5431)
[»] scaffold0570 (1 HSPs)
scaffold0570 (77-118)||(320-363)


Alignment Details
Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 23927974 - 23928083
Alignment:
Q  119 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcaca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  23927974 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacctgtacagaagcgctgccccttgattcaagcaaacatgcaca 23928073  T
Q  219 tagtgacaag 228  Q
    ||||||||||    
T  23928074 tagtgacaag 23928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 14783303 - 14783408
Alignment:
Q  123 cgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcacatagt 222  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||| |||||||| ||| || ||||||||| | |||||| ||||||    
T  14783303 cgtctcccccacggttgttgcccccgttgacacatacgttgcacaatcataaacttgtccagaagcgttgccccatgattcaagcatacatgcgcatagt 14783402  T
Q  223 gacaag 228  Q
    ||||||    
T  14783403 gacaag 14783408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1899653 - 1899576
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  1899653 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaa 1899576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2833962 - 2833885
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||  ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  2833962 tcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 2833885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14294055 - 14294132
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  14294055 tcactttagaagtataactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaa 14294132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23037296 - 23037365
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagc 70  Q
    |||||| |||||||||| ||||||| ||||||| |||||||||||||||| ||||||||| |||||||||    
T  23037296 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttatgataaaaagaagaaaaagc 23037365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 22428118 - 22428188
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||| ||||||||    
T  22428118 agaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaa 22428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1577155 - 1577078
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||| || || |||||| ||||||| | |||||||    
T  1577155 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaa 1577078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38281669 - 38281592
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| | |||||  |||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  38281669 tcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaa 38281592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2266392 - 2266324
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 69  Q
    |||||| |||||||||| |||||||  |||||| ||||||||||||||||||| |||| | ||||||||    
T  2266392 tcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaaacgaagaaaaag 2266324  T

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Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25449360 - 25449470
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| ||||||| || ||||||| ||||||| |||||||||||| |||||| |||||| | ||| ||| ||||       |||||||| |||||||||    
T  25449360 tcacttcagaagtataactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaaaaaatagccaaca-------caattcaacccccttctt 25449451  T
Q  101 gtatttttctcaccttcaa 119  Q
    || ||||||||||||||||    
T  25449452 gtgtttttctcaccttcaa 25449470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29215106 - 29215039
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    |||||| |||||| ||| ||||||| ||||||| ||||||||||||||||| | |||||| |||||||    
T  29215106 tcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaa 29215039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30892371 - 30892294
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||||||||| | |||  | ||||||||| |||||||    
T  30892371 tcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaagctaacacaa 30892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36133517 - 36133440
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | ||||| || |||||| |||| ||| |||||||||||||||| || |||||| ||||||||| |||||||    
T  36133517 tcacttcataagtaaaactctatcgacttatgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaa 36133440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22465585 - 22465696
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| |||||||||| ||   |||||||||| |||||||||||||||||||  ||| | | ||||||        |||||||||||||  ||||||||    
T  22465585 tcacttcagaagtagaactccgcctacttctgatcagtgttttcagcttaggagtaaacgaataaaaag-------taaacacaattcaaccccccttct 22465677  T
Q  100 tgtatttttctcaccttca 118  Q
    |||||||||||||||||||    
T  22465678 tgtatttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 20959821 - 20959880
Alignment:
Q  19 tctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||| ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  20959821 tctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 20959880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 22202661 - 22202767
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttt 107  Q
    ||||| |||| ||||| | ||| ||| |||||||||||| |||||| |||| | ||||||||       | |||||||||||| ||||| ||||| ||||    
T  22202661 agaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaag-------ataacacaattcaaccccctccttgtgtttt 22202753  T
Q  108 tctcaccttcaaac 121  Q
    ||||||||||||||    
T  22202754 tctcaccttcaaac 22202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 25398708 - 25398671
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcacctt 116  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  25398708 aacacaattcaacccccttcttgtgtttttctcacctt 25398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 42283879 - 42283838
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaa 120  Q
    |||||| ||||| ||||||||||| |||||||||||||||||    
T  42283879 aacacacttcaacccccttcttgtgtttttctcaccttcaaa 42283838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14264201 - 14264261
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaag 60  Q
    |||||| |||||||||| ||||||| ||| ||| ||||||||| |||||||||| ||||||    
T  14264201 tcacttcagaagtagaattctatctgcttttgatcagtgtttttcagcttaggagaaaaag 14264261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 19171206 - 19171250
Alignment:
Q  77 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  19171206 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 19171250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 23053613 - 23053577
Alignment:
Q  82 acaattcaatccccttcttgtatttttctcaccttca 118  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  23053613 acaattcaacccccttcttgtgtttttctcaccttca 23053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 43283475 - 43283503
Alignment:
Q  92 ccccttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||||||||||||||||||    
T  43283475 ccccttcttgtatttttctcaccttcaaa 43283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 17705698 - 17705807
Alignment:
Q  119 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcaca 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| | |||||| ||    
T  17705698 aacacgtctcccccacggttgttgcccccgttgacacatatgttgcacaatcagaaacctgtccagaagcgctgccccttgattcaagcatacatgcgca 17705797  T
Q  219 tagtgacaag 228  Q
    ||||||||||    
T  17705798 tagtgacaag 17705807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45539334 - 45539445
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  ||||||||    
T  45539334 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaaccccccttct 45539426  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  45539427 tgtgtttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23264477 - 23264554
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  23264477 tcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaa 23264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30422280 - 30422357
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  30422280 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaa 30422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16206532 - 16206458
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| ||||    
T  16206532 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaaca 16206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17796718 - 17796641
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  17796718 tcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 17796641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18121982 - 18122059
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || ||||||||||| |||| |||||| ||||||||| |||||||    
T  18121982 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaa 18122059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 23185603 - 23185673
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| ||||||| | |||||||    
T  23185603 agaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaa 23185673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31445403 - 31445345
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa 59  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||    
T  31445403 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaaaaaaa 31445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9319873 - 9319814
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 60  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||| | ||||||    
T  9319873 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaag 9319814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 27739109 - 27739070
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  27739109 aacacaattcaacccccttcttgtatttttctcaccttca 27739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 9767971 - 9768012
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  9767971 aaaacacaattcaacccccttcttgtgtttttctcaccttca 9768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15336937 - 15337013
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15336937 tcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15337013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15426002 - 15426078
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15426002 tcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15426078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15517306 - 15517382
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15517306 tcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17007611 - 17007534
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||| |||||||||    
T  17007611 tcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaacaaacacaa 17007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 22673070 - 22672967
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttt 107  Q
    |||||||||| ||||||| ||||||| | || ||||||| |||||| |||||  ||||||||| |||||||       ||||| ||||||||||| ||||    
T  22673070 agaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaa-------ttcaacccccttcttgtgtttt 22672979  T
Q  108 tctcaccttcaa 119  Q
    ||||||||||||    
T  22672978 tctcaccttcaa 22672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25163372 - 25163295
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||| | | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  25163372 tcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 25163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21932159 - 21932099
Alignment:
Q  19 tctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||| ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  21932159 tctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 21932099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19942536 - 19942463
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| |||||||||| ||||||| ||| ||| | ||||||||||||||||| |||| | ||||||||| ||||    
T  19942536 tcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaaca 19942463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12758592 - 12758669
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| | || ||||| | ||||||| |||||||||||| |||||| |||| | ||||||||| |||||||    
T  12758592 tcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaa 12758669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17541339 - 17541416
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  17541339 tcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 17541416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19153325 - 19153248
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | |||| |||| |||||||    
T  19153325 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaataagctaacacaa 19153248  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 40846325 - 40846366
Alignment:
Q  79 aacacaattcaatcccc-ttcttgtatttttctcaccttcaa 119  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  40846325 aacacaattcaaccccccttcttgtatttttctcaccttcaa 40846366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 18157712 - 18157665
Alignment:
Q  77 aaaacacaattcaatcccc--ttcttgtatttttctcaccttcaaaca 122  Q
    |||||||||||||| ||||  ||||||| |||||||||||||||||||    
T  18157712 aaaacacaattcaacccccccttcttgtgtttttctcaccttcaaaca 18157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 19957258 - 19957301
Alignment:
Q  79 aacacaattcaatc--cccttcttgtatttttctcaccttcaaa 120  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  19957258 aacacaattcaatctccccttcttgtgtttttctcaccttcaaa 19957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 36470881 - 36470988
Alignment:
Q  121 cacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcacata 220  Q
    |||||||||||||| ||||||||| | |||||||||||||||||| ||||| |||| |||  |||| |||||| |||||||||||| | |||||| ||||    
T  36470881 cacgtctcccccacagttgttgcccctgttgacacatatgttgcataatcaaaaacctgtctagaaacgctgccccttgattcaagcagacatgcgcata 36470980  T
Q  221 gtgacaag 228  Q
    ||||||||    
T  36470981 gtgacaag 36470988  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23749830 - 23749715
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||| | ||||||||| |||||  ||  |||| |  ||||||||||    
T  23749830 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacac--aattcaatcccctccccttctt 23749733  T
Q  101 gtatttttctcaccttca 118  Q
    || |||||||||||||||    
T  23749732 gtgtttttctcaccttca 23749715  T

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Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22676365 - 22676476
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| | |||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||||        |||||||||||  |||||||||    
T  22676365 tcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagc-------caacacaattcaccccccttctt 22676457  T
Q  101 gtatttttctcaccttcaa 119  Q
    || ||||||||||||||||    
T  22676458 gtgtttttctcaccttcaa 22676476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24628702 - 24628816
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcc-ccttc 98  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||        |||||||||||| ||| |||||    
T  24628702 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------taacacaattcaactcctccttc 24628794  T
Q  99 ttgtatttttctcaccttcaaa 120  Q
    ||||||||||||||||||||||    
T  24628795 ttgtatttttctcaccttcaaa 24628816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3792637 - 3792560
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||| | ||||||||||||||||||| |||||| ||||||||| |||||||    
T  3792637 tcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 3792560  T

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Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14905130 - 14905207
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||||| |||||||    
T  14905130 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14905207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29120672 - 29120595
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||| |||||||    
T  29120672 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaa 29120595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54679165 - 54679088
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||| ||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  54679165 tcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaa 54679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44397513 - 44397402
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| ||||| |||| ||||||| ||||||| |||||||||||||||| || |||||| |||||||||        |||||||||||| |||||||||    
T  44397513 tcacttcagaagcagaactctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagc-------caacacaattcaacccccttctt 44397421  T
Q  101 gtatttttctcaccttcaa 119  Q
     | ||||||||||||||||    
T  44397420 atgtttttctcaccttcaa 44397402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17246914 - 17246847
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  17246914 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 56033832 - 56033755
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| |||||||  |||||||||||||||||| |||||| ||||||| | |||||||    
T  56033832 tcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 56033755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12600059 - 12599982
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  12600059 tcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 12599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19883997 - 19883920
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||||||||| ||| ||||||| |||||||  |||||||| ||||||||| |||||| ||||||| | |||||||    
T  19883997 tcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaa 19883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 14605720 - 14605825
Alignment:
Q  10 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat--ccccttcttgtatttt 107  Q
    |||||||| | ||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||||  ||||||||||| ||||    
T  14605720 aagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagc-------taacacaattcaatccccccttcttgtgtttt 14605812  T
Q  108 tctcaccttcaaa 120  Q
    |||||||||||||    
T  14605813 tctcaccttcaaa 14605825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10071808 - 10071693
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||| ||| ||||| | ||||| | ||||||||||||||||||| |||||| ||||||||  |||||  ||  ||| ||  ||||||||||    
T  10071808 tcacttcagaagtggaactctatttgcttcttatcagtgttttcagcttaggaaaaaaagaagaaaaagataacac--aattcaactccctccccttctt 10071711  T
Q  101 gtatttttctcaccttca 118  Q
     | |||||||||||||||    
T  10071710 atgtttttctcaccttca 10071693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13576953 - 13577030
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  13576953 tcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaa-gaataaaagcaaacacaa 13577030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 14116039 - 14115998
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  14116039 aacacaattcaacccccttcttgtgtttttctcaccttcaaa 14115998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55379616 - 55379559
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 58  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| ||||    
T  55379616 tcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaa 55379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 10072168 - 10072079
Alignment:
Q  27 cttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||| |||||  ||  |||  |  |||||||||||| |||||||||||||||    
T  10072168 cttctgatcagtgttttcatcttaggagaaaaagaagaaaaagctaacac--aattcaaccccctccccttcttgtgtttttctcaccttca 10072079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 55731134 - 55731078
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaa 57  Q
    |||||| |||||||||||||||||||||| | | |||| |||||||||||| |||||    
T  55731134 tcacttcagaagtagaaatctatctactttttatcagtattttcagcttagcataaa 55731078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 22089517 - 22089478
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  22089517 aacacaattcaacccccttcttgtgtttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37436335 - 37436402
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    |||||| | |||||||| ||||||| ||||||| ||||||||||| | ||||| |||||| |||||||    
T  37436335 tcacttcataagtagaactctatctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaa 37436402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 11514501 - 11514457
Alignment:
Q  77 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  11514501 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 11514457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 19570482 - 19570438
Alignment:
Q  77 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  19570482 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 19570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 20649630 - 20649673
Alignment:
Q  77 aaaacacaattcaatcccc--ttcttgtatttttctcaccttca 118  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  20649630 aaaacacaattcaatccccccttcttgtgtttttctcaccttca 20649673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45087791 - 45087902
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  ||||||||    
T  45087791 tcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaaccccccttct 45087883  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  45087884 tgtgtttttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24851466 - 24851543
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  24851466 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 24851543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28702018 - 28702130
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  ||||||||    
T  28702018 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaaccccccttct 28702110  T
Q  100 tgtatttttctcaccttcaa 119  Q
    ||| ||||||||||||||||    
T  28702111 tgtgtttttctcaccttcaa 28702130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 13964778 - 13964854
Alignment:
Q  2 cacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||| |||||||||    
T  13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaacaaacacaa 13964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39038434 - 39038545
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||        |||||||||||| |||||||||    
T  39038434 tcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------taacacaattcaactccccttct 39038526  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  39038527 tgtttttttctcaccttca 39038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25188708 - 25188631
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  25188708 tcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 25188631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21537981 - 21538092
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatc-cccttct 99  Q
    |||||| |||||||||| ||||||| ||||| | || ||||||||||||| || |||| | |||||||||       |||||||||||||||  ||||||    
T  21537981 tcacttcagaagtagaactctatctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagc-------aaacacaattcaatcttccttct 21538073  T
Q  100 tgtatttttctcaccttca 118  Q
    |||||||||||||||||||    
T  21538074 tgtatttttctcaccttca 21538092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6574958 - 6575017
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 60  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  6574958 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaag 6575017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22188901 - 22189013
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc--ttc 98  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||| ||||| |||||| ||||||| |        |||||||||||||||||  |||    
T  22188901 tcacttcagaagtagaactatatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaac-------caacacaattcaatcccccgttc 22188993  T
Q  99 ttgtatttttctcaccttca 118  Q
    |||| |||||||||||||||    
T  22188994 ttgtgtttttctcaccttca 22189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 7687307 - 7687347
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7687307 aacacaattcaacccccttcttgtatttttctcaccttcaa 7687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28712500 - 28712574
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| ||||||| || ||||||| ||||||| || |||||||||||||||| |||||  |||||||| |||||    
T  28712500 tcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaagaaaaca 28712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6391972 - 6391895
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | ||||||| |||||||||||||||| || | |||| ||||||| | |||||||    
T  6391972 tcacttcagaagtagaactctatatgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaa 6391895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24575338 - 24575261
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  24575338 tcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaa 24575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31801679 - 31801756
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | ||| |||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||| | |||||||    
T  31801679 tcactttaaaagcagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40780615 - 40780538
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  40780615 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 40780538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 21549185 - 21549225
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  21549185 aacacaattcaatccccttattgtgtttttctcaccttcaa 21549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23234259 - 23234183
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacaca 77  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||| ||||| |||||| | ||||| | ||||||    
T  23234259 tcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcataggagaaaaagaaaaaaaaaccaacaca 23234183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 28790137 - 28790176
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  28790137 aacacaattcaacccccttcttatatttttctcaccttca 28790176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10010544 - 10010601
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 58  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| ||||    
T  10010544 tcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaa 10010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20569543 - 20569620
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||  |||||||    
T  20569543 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa 20569620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24778637 - 24778560
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| | || ||||| | ||||||| |||||||||||||||||||  ||| | ||||||||| |||||||    
T  24778637 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacgaagaaaaagccaacacaa 24778560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 31968640 - 31968677
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcacctt 116  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  31968640 aacacaattcaacccccttcttgtgtttttctcacctt 31968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10631443 - 10631366
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  10631443 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa 10631366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21234462 - 21234350
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc--ttc 98  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||  ||||||||        |||||||||||| ||||  |||    
T  21234462 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagc-------taacacaattcaaccccccattc 21234370  T
Q  99 ttgtatttttctcaccttca 118  Q
    ||||||||||||||||||||    
T  21234369 ttgtatttttctcaccttca 21234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13435191 - 13435114
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||   |||||||||||||||||    
T  13435191 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaa 13435114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17380869 - 17380792
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  17380869 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 17380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21624398 - 21624321
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  21624398 tcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 21624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20113476 - 20113554
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgacca-gtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || ||||||||||||||||| |||| | |||||||||||||||||    
T  20113476 tcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 20113554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15532473 - 15532550
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | || |||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  15532473 tcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa 15532550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32543569 - 32543492
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||| ||| ||||||| ||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  32543569 tcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaa 32543492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24717660 - 24717739
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa--ggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||  | |||||||| ||||||||    
T  24717660 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaa 24717739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22801449 - 22801339
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| ||||||| ||||||| ||||||| | ||||||||  |||||  ||||||||| |||||||       ||||| |||||||||    
T  22801449 tcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaa-------ttcaacccccttctt 22801357  T
Q  101 gtatttttctcaccttca 118  Q
    || |||||||||||||||    
T  22801356 gtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9717132 - 9717020
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tccccttc 98  Q
    |||||| |||||| ||| ||||||| ||| ||| ||||||||||| ||||||| |||||| |||||| ||       |||||||||||||  ||||||||    
T  9717132 tcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgc-------aaacacaattcaacctccccttc 9717040  T
Q  99 ttgtatttttctcaccttca 118  Q
    |||| |||||||||||||||    
T  9717039 ttgtgtttttctcaccttca 9717020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14101287 - 14101364
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | |||||||| ||||||| ||||||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  14101287 tcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 14101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15301524 - 15301447
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  15301524 tcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 15301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20731549 - 20731626
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| | ||||||  |||||||    
T  20731549 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaaggtaacacaa 20731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16528621 - 16528544
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||| ||||| ||||||| ||||| | ||||||||||| ||||||| |||| | ||||||||| |||||||    
T  16528621 tcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaa 16528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18377733 - 18377656
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| |||||||  || ||| |||| ||||||||||| || |||||| ||||||||| |||||||    
T  18377733 tcacttcagaagtagaactctatctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagccaacacaa 18377656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13601473 - 13601398
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacac 76  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| ||||   ||||||||| |||||    
T  13601473 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacac 13601398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 23602459 - 23602420
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  23602459 aacataattcaatccccttcttgtatttttgtcaccttca 23602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19085438 - 19085361
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||| | |||||||||||||||| || |||| | ||||||||| |||||||    
T  19085438 tcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaa 19085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 33353158 - 33353199
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||||||| ||| |||||||||||||||    
T  33353158 aaaacacaattcaacccccttcctgtgtttttctcaccttca 33353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 12352974 - 12352930
Alignment:
Q  77 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  12352974 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 12352930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 21034278 - 21034234
Alignment:
Q  77 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  21034278 aaaacacaattcaacccccgttcttgtgtttttctcaccttcaaa 21034234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7746527 - 7746604
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  7746527 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 7746604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 33021957 - 33021845
Alignment:
Q  9 gaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa--gcaaacacaaaacacaattcaa-tccccttcttgtatt 105  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||    ||| |   ||||||||||||  ||||||||||| ||    
T  33021957 gaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaggagaaaaatgagaaaaagccaacacaattcaaccccccttcttgtgtt 33021858  T
Q  106 tttctcaccttca 118  Q
    |||||||||||||    
T  33021857 tttctcaccttca 33021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6498620 - 6498543
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||| | ||||||||||||||||||| |||| | ||||||||| |||||||    
T  6498620 tcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 6498543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 33932566 - 33932496
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||||||||| | ||||||| ||||||||||||||||| | |||||  ||||||||| |||||||    
T  33932566 agaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaaagaaaaagccaacacaa 33932496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37395473 - 37395360
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| |||| ||||| ||||||| ||||| | ||||||||||||||||||| || ||| ||||||||        |||||||||||||  ||||||||    
T  37395473 tcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaag-------taaacacaattcaaccccccttct 37395381  T
Q  100 tgtatttttctcaccttcaaa 120  Q
    ||| |||||||||||||||||    
T  37395380 tgtgtttttctcaccttcaaa 37395360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13546358 - 13546435
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || |||||||||||||| | |||| | |||||||| ||||||||    
T  13546358 tcacttcagaagtagaactctatctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaa 13546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13736937 - 13737014
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||| ||| |||||||  |||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  13736937 tcacttcagaagtggaactctatctgtttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaa 13737014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 26120721 - 26120764
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaaca 122  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  26120721 aacacaattcaacccccttcttgtgtttttctcaccttcaaaca 26120764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30742245 - 30742135
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| | ||||| ||||||| |||||||||||||||   | |||||| ||||||||  |||||||       ||||| |||||||||    
T  30742245 tcacttcagaagtagaactatatctgcttctgatcagtgttttcagctttaaagaaaaagaagaaaaagtcaacacaa-------ttcaacccccttctt 30742153  T
Q  101 gtatttttctcaccttca 118  Q
    || |||||||||||||||    
T  30742152 gtgtttttctcaccttca 30742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31117181 - 31117106
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacac 76  Q
    |||||| |||||||||| |||||||  || ||| ||||||||||||||||||| |||| | |||||||| ||||||    
T  31117181 tcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacac 31117106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42242913 - 42242854
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 60  Q
    |||||| | |||||||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  42242913 tcacttcataagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaaag 42242854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21076014 - 21076088
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| |||||||||| || |||| ||||||| ||||||| ||||||||||| |||| | ||||||||| ||||    
T  21076014 tcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaaca 21076088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9399444 - 9399521
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||| ||||| ||||||| |||||||  |||||||||||||||||| |||| | ||||||| | |||||||    
T  9399444 tcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 9399521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11993194 - 11993118
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||||| || |||| ||||||||| || |||||| |||||| |||||||||||||||||    
T  11993194 tcacttcagaagcagaactctatctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaa 11993118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21100581 - 21100658
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | |||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  21100581 tcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 21100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23413807 - 23413884
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | ||| |||| ||||| ||||||||  ||||||||||||||||||| |||| | ||||||||| |||||||    
T  23413807 tcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 23413884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23880318 - 23880269
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagctta 50  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||    
T  23880318 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 22000884 - 22000935
Alignment:
Q  27 cttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  22000884 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 22000935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6513261 - 6513338
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||| ||| |||||||||||||||| || |||| | ||||||||| |||||||    
T  6513261 tcacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaa 6513338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31487502 - 31487437
Alignment:
Q  13 tagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  31487502 tagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaa 31487437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 39799714 - 39799755
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaa 120  Q
    ||||||||||||  |||||||||| |||||||||||||||||    
T  39799714 aacacaattcaactcccttcttgtgtttttctcaccttcaaa 39799755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 28465248 - 28465296
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaacacgtct 127  Q
    |||||||||||| ||||||||||| ||||||| ||||||| || |||||    
T  28465248 aacacaattcaacccccttcttgtgtttttcttaccttcatactcgtct 28465296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 35544010 - 35544053
Alignment:
Q  77 aaaacacaattcaa--tccccttcttgtatttttctcaccttca 118  Q
    ||||||||||||||  |||||||||||| |||||||||||||||    
T  35544010 aaaacacaattcaacctccccttcttgtgtttttctcaccttca 35544053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1241924 - 1242001
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||| | |||||||    
T  1241924 tcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 1242001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14968677 - 14968600
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  14968677 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40799198 - 40799121
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  40799198 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaa 40799121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14954716 - 14954641
Alignment:
Q  3 acttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  14954716 acttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14954641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 50299539 - 50299430
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc-ttcttgtattt 106  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||   |||   |||||||||||||| |||| ||||| | |||    
T  50299539 agaagtagaaatctatctgcttctgatcagtgttttcaacttaggagaaaaagaagaaaagaaaaa---aaaacacaattcaaccccccttcttatgttt 50299443  T
Q  107 ttctcaccttcaa 119  Q
    |||||||||||||    
T  50299442 ttctcaccttcaa 50299430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20628311 - 20628388
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||||| |||||||    
T  20628311 tcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaaaagaagaaaaagctaacacaa 20628388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29952286 - 29952363
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  29952286 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 29952363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30001440 - 30001517
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  30001440 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 30001517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 23646517 - 23646625
Alignment:
Q  121 cacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcag-aaacatgtacagaagcgctgctccttgattcaagaaaacatgcacat 219  Q
    |||||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||| | | |||||| | ||| |||| ||||||| | |||||| |||    
T  23646517 cacgtctcccccacggttgttgcccccgttgactcatacgttgcgcaatcagaaaacctatccagaagtgttgccccttaattcaagcagacatgcgcat 23646616  T
Q  220 agtgacaag 228  Q
    |||||||||    
T  23646617 agtgacaag 23646625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12727085 - 12727198
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcc-ccttct 99  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||| || ||||||    
T  12727085 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagc-------taacacaattcaaccctccttct 12727177  T
Q  100 tgtatttttctcaccttcaaa 120  Q
    ||| |||||||||||||||||    
T  12727178 tgtgtttttctcaccttcaaa 12727198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6090036 - 6089959
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| |  |||||||| |||||||    
T  6090036 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaa 6089959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18122497 - 18122574
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| || |||| ||||||||||||| ||||| |||||||||||||| | |||||||    
T  18122497 tcacttcagaagtagaactctatctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaa 18122574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31302657 - 31302580
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||| |||||| ||||||| | |||||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaa 31302580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38178494 - 38178571
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||||| |||||||  |||||||||||||||||| |||||| ||||||||| |||||||    
T  38178494 tcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 38178571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49554359 - 49554436
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||| | |||||||    
T  49554359 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 49554436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52283103 - 52283026
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| | ||||||  |||||||    
T  52283103 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaa 52283026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11189301 - 11189190
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| | |||||||| ||||||| ||||||| ||||||||||| ||||||| |||||| ||||||| |        ||||||||||||  ||||||||    
T  11189301 tcacttcataagtagaactctatcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaac-------caacacaattcaacacccttctt 11189209  T
Q  101 gtatttttctcaccttcaa 119  Q
    || ||||||||||||||||    
T  11189208 gtgtttttctcaccttcaa 11189190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 15902475 - 15902393
Alignment:
Q  29 tctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    ||||| ||||||||||||||||||| |||||| |||||||||        |||||||||||| ||||||||||| |||||||||||||||    
T  15902475 tctgatcagtgttttcagcttaggagaaaaagaagaaaaagc-------taacacaattcaacccccttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47206971 - 47206912
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 60  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  47206971 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaag 47206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14393844 - 14393956
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tccccttc 98  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||| ||||||| |||| | |||||||||        ||||||||||||   |||||||    
T  14393844 tcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagc-------taacacaattcaacgcccccttc 14393936  T
Q  99 ttgtatttttctcaccttca 118  Q
    ||||||||||||||||||||    
T  14393937 ttgtatttttctcaccttca 14393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11222856 - 11222741
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| || |||  ||| ||  |||  |  |||||||||||| |||||||||    
T  11222856 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaa--aaagcc--aacacaattcaacccccttctt 11222761  T
Q  101 gt-atttttctcaccttcaa 119  Q
    ||  ||||||||||||||||    
T  11222760 gtgttttttctcaccttcaa 11222741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41494310 - 41494234
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||| ||||| ||||| ||||||||| |||||||||||||||||||  ||||| ||||||||| |||||||    
T  41494310 tcacttcagaaatagaactctatttacttctgatcagtgttttcagcttagga-gaaaagaagaaaaagccaacacaa 41494234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11222104 - 11222052
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttagga 53  Q
    |||||| |||||||||| ||||||| ||||||| |||||||||||||||||||    
T  11222104 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcttagga 11222052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 14006920 - 14006879
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  14006920 aaaacacaattcaacccccttcttgtgtttttctcaccttca 14006879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 11073663 - 11073623
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  11073663 aacacaattcaacccccttcttgtgtttttctcaccttcaa 11073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19885927 - 19885995
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 69  Q
    |||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||||    
T  19885927 tcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaag 19885995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22804870 - 22804937
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    |||||| | |||||||| ||||||| ||||||| ||||||||||| ||||||| |||| | |||||||    
T  22804870 tcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaa 22804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47406266 - 47406325
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 60  Q
    |||||| | |||||| | ||||||| ||||||| ||||||||||||||||||| ||||||    
T  47406266 tcacttcacaagtagcactctatctccttctgatcagtgttttcagcttaggagaaaaag 47406325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 52919720 - 52919622
Alignment:
Q  13 tagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttttctca 112  Q
    ||||| ||||||| ||| ||| ||||||||||||||||||| |||| | ||||||| |        |||||||||||  ||||||||||| |||||||||    
T  52919720 tagaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaac-------taacacaattcagcccccttcttgtgtttttctca 52919628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 13939197 - 13939127
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||| |||||||||| | |||||||  |||||||||||||||||| ||||   ||||||||| |||||||    
T  13939197 agaagcagaaatctatttgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaa 13939127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19889788 - 19889862
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| ||||| |||| ||||| | ||||| | ||||||||||||||||||| |||| | ||||||||| ||||    
T  19889788 tcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaaca 19889862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33582527 - 33582469
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa 59  Q
    |||||| |||| ||||||||||||||||||| | ||||||||||| |||| || |||||    
T  33582527 tcacttcagaattagaaatctatctacttcttatcagtgttttcatcttatgagaaaaa 33582469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2782794 - 2782737
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 58  Q
    |||||| |||||||||| |||||||  |||||| |||||||||||||| |||| ||||    
T  2782794 tcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaa 2782737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2783184 - 2783127
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 58  Q
    |||||| |||||||||| |||||||  |||||| |||||||||||||| |||| ||||    
T  2783184 tcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaa 2783127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 7833636 - 7833677
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaa 120  Q
    ||||||||| || ||||||||||| |||||||||||||||||    
T  7833636 aacacaatttaacccccttcttgtgtttttctcaccttcaaa 7833677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 7833719 - 7833760
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaaa 120  Q
    ||||||||| || ||||||||||| |||||||||||||||||    
T  7833719 aacacaatttaacccccttcttgtgtttttctcaccttcaaa 7833760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 22128340 - 22128299
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  22128340 aaaacacaattcaacccctttattgtatttttctcaccttca 22128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49643613 - 49643690
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | ||| |||| ||||| | ||| ||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  49643613 tcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 49643690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53057574 - 53057623
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagctta 50  Q
    |||||| |||||||||| |||||||||||||||  || ||||||||||||    
T  53057574 tcacttcagaagtagaactctatctacttctgattagagttttcagctta 53057623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 2025352 - 2025293
Alignment:
Q  59 aggagaaaaagcaaacacaaaacacaattcaatcccc-ttcttgtatttttctcaccttca 118  Q
    ||||||||||| ||| | |||||||||||||| |||| ||||||| |||||||||||||||    
T  2025352 aggagaaaaagaaaa-agaaaacacaattcaaccccccttcttgtgtttttctcaccttca 2025293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 11067481 - 11067441
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    |||||||||||| | ||||||||| ||||||||||||||||    
T  11067481 aacacaattcaacctccttcttgtgtttttctcaccttcaa 11067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 14310919 - 14310875
Alignment:
Q  77 aaaacacaattcaatc-cccttcttgtatttttctcaccttcaaa 120  Q
    |||||||||||||| | |||||||||||||||| |||||||||||    
T  14310919 aaaacacaattcaacctcccttcttgtatttttgtcaccttcaaa 14310875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 16305963 - 16306003
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    |||||||||||| ||| |||||||||||||||||| |||||    
T  16305963 aacacaattcaacccctttcttgtatttttctcacattcaa 16306003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 16881480 - 16881444
Alignment:
Q  82 acaattcaatccccttcttgtatttttctcaccttca 118  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  16881480 acaattcaacccccttcttgtgtttttctcaccttca 16881444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24776361 - 24776405
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttca 45  Q
    |||||| |||||||||| ||||||| ||||||| |||||||||||    
T  24776361 tcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

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Target: scaffold0859 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2277 - 2166
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccc-cttct 99  Q
    |||||| |||||||||| ||||||| ||||||| |||||| |||||||||||| |||||| ||||||||       |||||||||||||| ||| |||||    
T  2277 tcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaaccccacttct 2185  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  2184 tgtgtttttctcaccttca 2166  T

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Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13879449 - 13879331
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||| || || |||||| |||||||||||||||||  ||     |   |||||||||    
T  13879449 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaaccccccccccccttctt 13879350  T
Q  101 gtatttttctcaccttcaa 119  Q
    |||||||||||||||||||    
T  13879349 gtatttttctcaccttcaa 13879331  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4493850 - 4493773
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  4493850 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 4493773  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14186992 - 14186915
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||| |||||| |||||||| ||||||||    
T  14186992 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaa 14186915  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15467221 - 15467144
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  15467221 tcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaa 15467144  T

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Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16546189 - 16546266
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  16546189 tcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 16546266  T

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Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16619473 - 16619396
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  16619473 tcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 16619396  T

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Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21284226 - 21284303
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||| ||||| ||||||| ||||||| ||||||||||||||||||| |||| |||||||||| ||||||||    
T  21284226 tcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaa 21284303  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28623205 - 28623282
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| |||||| |||||||||||| |||||| ||||||||| |||||||    
T  28623205 tcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaa 28623282  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48237687 - 48237764
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||||||||||| |||||||||||||||| || |||||| ||||||||  |||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaagagaaaaagaagaaaaagtcaacacaa 48237764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 16557469 - 16557539
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  16557469 agaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaa 16557539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 16608193 - 16608123
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  16608193 agaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaa 16608123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13027803 - 13027880
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| || ||||||| |||||||| |||| | |||||||||||||||||    
T  13027803 tcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaa 13027880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19328862 - 19328939
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||| ||| ||||||||||||||| ||| |||||| ||||||||| |||||||    
T  19328862 tcacttcagaagtagaactctatctgcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaa 19328939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21691730 - 21691653
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  21691730 tcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaa 21691653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35954763 - 35954840
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  35954763 tcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaa 35954840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13473339 - 13473448
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttctt 100  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | |||||||        |  ||||||||||| |||||||||    
T  13473339 tcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa--------actacacaattcaagccccttctt 13473430  T
Q  101 gtatttttctcaccttca 118  Q
    |||||||||||| |||||    
T  13473431 gtatttttctcatcttca 13473448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 2499327 - 2499223
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat-ccccttcttgtattt 106  Q
    |||||||||| ||||||| |||||||  |||||||||||||||||| |||| | ||||||||         ||||||||||||| ||||||||||| |||    
T  2499327 agaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaag-------ttaacacaattcaatcccccttcttgtgttt 2499235  T
Q  107 ttctcaccttca 118  Q
    ||||||||||||    
T  2499234 ttctcaccttca 2499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11792176 - 11792065
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||||||||  |||||| ||||||| ||||||||||| ||||||| |||| | ||||||||       | ||||||||||||  ||||||||    
T  11792176 tcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaag-------ataacacaattcaaccccccttct 11792084  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  11792083 tgtgtttttctcaccttca 11792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13259295 - 13259406
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||| |||| ||||| || |||||| ||||||| ||||||||||| |||| | ||||||||       ||||||||||||||  ||||||||    
T  13259295 tcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaag-------aaaacacaattcaaccccccttct 13259387  T
Q  100 tgtatttttctcaccttca 118  Q
    ||| |||||||||||||||    
T  13259388 tgtgtttttctcaccttca 13259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 30025231 - 30025163
Alignment:
Q  10 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||| | ||||| ||||||| || |||||||||||||||| |||| | |||||||||||||||||    
T  30025231 aagtagaactttatctgcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 30025163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13034705 - 13034772
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | |||||||    
T  13034705 tcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 33604203 - 33604097
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttcttgtattt 106  Q
    ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | |||||||||        ||||||||||||  ||||||||||| |||    
T  33604203 agaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------caacacaattcaaccccccttcttgtgttt 33604111  T
Q  107 ttctcaccttcaaa 120  Q
    ||||||||||||||    
T  33604110 ttctcaccttcaaa 33604097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9710686 - 9710763
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  9710686 tcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaa-gaataaaagcaaacacaa 9710763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 22580113 - 22580183
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| | ||||| ||| ||| ||||||||||||| ||||| |||||| ||||||||| |||||||    
T  22580113 agaagtagaactttatctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaa 22580183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 8932995 - 8932954
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  8932995 aaaacacaattcaacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13731528 - 13731605
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| | ||||||||||||||||| |||| | ||||||||| |||||||    
T  13731528 tcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 13731605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16315389 - 16315466
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  16315389 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaa 16315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41843274 - 41843351
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||| ||| ||||||| |||||||||||||||| || |||| | ||||||||  |||||||    
T  41843274 tcacttcagaagtagaactctttctgcttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaa 41843351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33692574 - 33692689
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtg-ttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttc 98  Q
    |||||| |||||| ||| ||||||||||||||| || || |||||||||||||| |||| | ||||||||         |||||||||||| |||||||     
T  33692574 tcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaaggaagaaaaag-------ttaacacaattcaactccccttt 33692666  T
Q  99 ttgtatttttctcaccttcaaac 121  Q
    |||| ||||||||||||||||||    
T  33692667 ttgtgtttttctcaccttcaaac 33692689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 1292355 - 1292247
Alignment:
Q  4 cttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tccccttcttg 101  Q
    |||||||||||||| ||||||| ||||||| | |  ||||||| |||||| |||||| |||||||||        ||||||||||||  |||||||||||    
T  1292355 cttaagaagtagaattctatctgcttctgaactgcattttcag-ttaggagaaaaagaagaaaaagc-------taacacaattcaacctccccttcttg 1292264  T
Q  102 tatttttctcaccttca 118  Q
    | |||||||||||||||    
T  1292263 tgtttttctcaccttca 1292247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 8182192 - 8182153
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  8182192 aacacaattcaacccccttcttgtgtttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 9761925 - 9761886
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  9761925 aacacaattcaaaccccttcttgtgtttttctcaccttca 9761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 4412889 - 4412931
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttcaa 119  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  4412889 aaaacacaattcaacccccttcttttgtttttctcaccttcaa 4412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 9802318 - 9802280
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttc 117  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  9802318 aacacaattcaacccccttcttgtgtttttctcaccttc 9802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10884022 - 10884135
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| ||||   |||||||||        ||||||||||||  ||||||||    
T  10884022 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagc-------taacacaattcaaccccccttct 10884114  T
Q  100 tgtatttttctcaccttcaaa 120  Q
    ||| |||||||||||||||||    
T  10884115 tgtgtttttctcaccttcaaa 10884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13261527 - 13261636
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttct 99  Q
    |||||| ||||| |||| ||||| | ||||||| || ||| |||||||||||| |||| | ||||||||       ||||||||||||||  ||||||||    
T  13261527 tcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaag-------aaaacacaattcaaccccccttct 13261619  T
Q  100 tgtatttttctcacctt 116  Q
    ||| |||||||||||||    
T  13261620 tgtgtttttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 13645750 - 13645680
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||| |||| ||||| | ||||||| | ||||||||||||||||| |||| | ||||||||| |||||||    
T  13645750 agaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 13645680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23280827 - 23280905
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||| |||  |||||| ||||||| ||||||||| |||||||||| |||||| ||||||| | |||||||    
T  23280827 tcactttagaagtggaacactatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaa 23280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12175186 - 12175263
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | |||||||||| ||||| ||||||| ||||||||||| ||| ||| |||||  ||||||| | |||||||    
T  12175186 tcacttcaaaagtagaaatttatctgcttctgatcagtgttttcaactttggagaaaaacaagaaaaaaccaacacaa 12175263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12367609 - 12367686
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| ||||||||||| ||||||| |||| | ||||||||  |||||||    
T  12367609 tcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaagataacacaa 12367686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13302167 - 13302090
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||| | |||||||    
T  13302167 tcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 13302090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29936197 - 29936274
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | ||||||| || |||||||| |||| || |||| | |||||||||||||||||    
T  29936197 tcacttcagaagcagaactctatttgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaagcaaacacaa 29936274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9274 - 9197
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  9274 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7512 - 7588
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  7512 tcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaa 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 929 - 852
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||  |||||||    
T  929 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa 852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25736 - 25659
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||| | |||||||| ||||||||    
T  25736 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaa 25659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 28897 - 28853
Alignment:
Q  77 aaaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 119  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  28897 aaaacacaattcaacccccccttcttgtatttttctcaccttcaa 28853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 111403 - 111480
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| | |||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  111403 tcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaa 111480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 7976 - 7900
Alignment:
Q  2 cacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17639 - 17560
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaa--aaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||||||||| | ||||||| ||||||||||||||||||| |||  ||| ||||||||| |||||||    
T  17639 tcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaagaagaagaaaaagccaacacaa 17560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 755 - 832
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| || |||| ||||||| ||||||||||||||||||| ||| || ||||||||  |||||||    
T  755 tcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaa 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 102863 - 102795
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 69  Q
    |||||| |||||||||| ||||||| ||| ||| ||||||||||||||||||| |||| | ||||||||    
T  102863 tcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaag 102795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 83667 - 83591
Alignment:
Q  3 acttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||| |||||| ||| ||||||| ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  83667 acttcagaagtggaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 83591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 83579 - 83527
Alignment:
Q  27 cttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 83527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 211658 - 211553
Alignment:
Q  10 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat--ccccttcttgtatttt 107  Q
    |||||||| | ||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||||  ||||||||||| ||||    
T  211658 aagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagc-------taacacaattcaatccccccttcttgtgtttt 211566  T
Q  108 tctcaccttcaaa 120  Q
    |||||||||||||    
T  211565 tctcaccttcaaa 211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10910 - 10988
Alignment:
Q  1 tcacttaagaagtagaaatctatctactt-ctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  10910 tcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 10988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15574 - 15652
Alignment:
Q  1 tcacttaagaagtagaaatctatctactt-ctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  15574 tcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2817 - 2894
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||||| |||||||    
T  2817 tcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 2894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 7095 - 7054
Alignment:
Q  77 aaaacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  7095 aaaacacaattcaacccccttcttgtgtttttctcaccttca 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 492 - 541
Alignment:
Q  19 tctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 68  Q
    ||||||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  492 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 158454 - 158377
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| |||||| ||| ||||||| ||||| |  |||| |||||||||||||||||| | |||| ||||||||||||    
T  158454 tcacttcagaagtggaactctatctgcttctaataagtgatttcagcttaggataaaacgaagaataagcaaacacaa 158377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 59905 - 59962
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 58  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||| | ||||| ||||    
T  59905 tcacttcagaagtagaactctatctacttctgatcagtgttttcaacataggagaaaa 59962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 210705 - 210602
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccccttcttgtatttt 107  Q
    |||||||||| ||||||| ||||||| | || ||||||| |||||| |||||  ||||||||| |||||||       ||||| ||||||||||| ||||    
T  210705 agaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaa-------ttcaacccccttcttgtgtttt 210614  T
Q  108 tctcaccttcaa 119  Q
    ||||||||||||    
T  210613 tctcaccttcaa 210602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 219476 - 219431
Alignment:
Q  79 aacacaattcaatcccctt-cttgtatttttctcaccttcaaacac 123  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  219476 aacacaattcaaccccctttcttatatttttctcaccttcaaacac 219431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 378354 - 378431
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||| ||||| |||| ||||| | |||||||  ||||||||||| |||||| |||| | ||||||||| |||||||    
T  378354 tcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaa 378431  T

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Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 245126 - 245166
Alignment:
Q  79 aacacaattcaa-tccccttcttgtatttttctcaccttca 118  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  245126 aacagaattcaactccccttcttgtatttttctcaccttca 245166  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7187 - 7119
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 69  Q
    |||||||||||| | || ||||| | ||||||| ||||||||||||||||||| |||||  ||||||||    
T  7187 tcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaataagaaaaag 7119  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 2627 - 2666
Alignment:
Q  79 aacacaattcaatccccttcttgtatttttctcaccttca 118  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  2627 aacacaattcaacccccttcttgtatttttctcacattca 2666  T

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Target: scaffold0290 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 19464 - 19534
Alignment:
Q  8 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||||| ||||||| |||||||  |||||||||||| || || |||| | ||||||||| |||||||    
T  19464 agaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaa 19534  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24579 - 24652
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 75  Q
    |||||| |||||||||  ||||||| |||||||  ||||||||||| |||||| |||||| ||||| ||||||||    
T  24579 tcacttcagaagtagagctctatctgcttctgattagtgttttcag-ttaggagaaaaagaagaaagagcaaaca 24652  T

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Target: scaffold0567 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9206 - 9137
Alignment:
Q  1 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagc 70  Q
    |||||| ||||| || | ||||| | ||||||| ||||||||||||||||||| |||| | |||||||||    
T  9206 tcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc 9137  T

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Target: scaffold1747 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 559 - 516
Alignment:
Q  78 aaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 119  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  559 aaacacaattcaatccccccttcttgtgtttttctcaccttcaa 516  T

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Target: scaffold1745 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 852 - 895
Alignment:
Q  78 aaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 119  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  852 aaacacaattcaatccccccttcttgtgtttttctcaccttcaa 895  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 5431 - 5364
Alignment:
Q  10 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 78  Q
    |||||||| ||||||| ||||||| |  | ||||||| ||||||||||||| ||||||||| |||||||    
T  5431 aagtagaactctatctgcttctgatctatattttcag-ttaggataaaaagaagaaaaagccaacacaa 5364  T

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Target: scaffold0570 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 320 - 363
Alignment:
Q  77 aaaacacaattcaa--tccccttcttgtatttttctcaccttca 118  Q
    ||||||||||||||  |||||||||||| |||||||||||||||    
T  320 aaaacacaattcaacctccccttcttgtgtttttctcaccttca 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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