View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6902_high_6 (Length: 288)
Name: NF6902_high_6
Description: NF6902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6902_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 20 - 281
Target Start/End: Complemental strand, 28525015 - 28524752
Alignment:
| Q |
20 |
aaatcattaacaaactcgtttaaaagttgatttggagaccgatttagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattc--taaatg |
117 |
Q |
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| T |
28525015 |
aaatcattaacaaactcgtttaaaagttgatttggagaccgatctagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattcgctaaatg |
28524916 |
T |
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| Q |
118 |
atgatttgttagtagtagctaatcttagaatattatgtattatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaa |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28524915 |
atgatttgttagtagtagctaatcttagaatattatgtactatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaa |
28524816 |
T |
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| Q |
218 |
actatgcaagtcaatgagatagagactatacagaagattaaagtagtggttagtacctatgctt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
28524815 |
actatgcaagtcaatgagatagagactatacagaagattaaagtagaagttagtacctatgctt |
28524752 |
T |
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