View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6903_high_4 (Length: 464)

Name: NF6903_high_4
Description: NF6903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6903_high_4
NF6903_high_4
[»] chr3 (58 HSPs)
chr3 (122-449)||(11772587-11772914)
chr3 (316-449)||(11778497-11778630)
chr3 (122-191)||(11778628-11778697)
chr3 (26-108)||(44743816-44743898)
chr3 (26-92)||(36720414-36720480)
chr3 (26-108)||(52769944-52770026)
chr3 (26-108)||(2667895-2667977)
chr3 (26-108)||(4844472-4844554)
chr3 (26-108)||(4870168-4870250)
chr3 (26-108)||(10445100-10445182)
chr3 (32-108)||(8075088-8075164)
chr3 (266-345)||(9853337-9853417)
chr3 (28-108)||(47454578-47454658)
chr3 (18-85)||(28703388-28703455)
chr3 (26-108)||(14339643-14339725)
chr3 (26-108)||(30311339-30311421)
chr3 (26-108)||(46518661-46518743)
chr3 (26-108)||(51903839-51903921)
chr3 (266-353)||(9842392-9842480)
chr3 (228-292)||(10264627-10264691)
chr3 (26-108)||(2709410-2709492)
chr3 (26-92)||(8051247-8051313)
chr3 (309-416)||(10093259-10093364)
chr3 (251-297)||(10130843-10130889)
chr3 (251-297)||(10372126-10372172)
chr3 (26-95)||(4222174-4222243)
chr3 (254-311)||(10093190-10093247)
chr3 (254-311)||(10200072-10200129)
chr3 (34-107)||(37788428-37788500)
chr3 (29-85)||(3427537-3427593)
chr3 (139-207)||(10532589-10532657)
chr3 (26-74)||(27259194-27259242)
chr3 (28-108)||(44069793-44069873)
chr3 (32-108)||(49397502-49397578)
chr3 (309-395)||(10200141-10200228)
chr3 (26-85)||(15048045-15048104)
chr3 (17-104)||(31520570-31520657)
chr3 (21-92)||(39041958-39042028)
chr3 (18-108)||(8853760-8853850)
chr3 (274-312)||(10130689-10130727)
chr3 (274-312)||(10372288-10372326)
chr3 (26-108)||(10499070-10499152)
chr3 (34-92)||(14186688-14186746)
chr3 (26-104)||(28531023-28531101)
chr3 (28-74)||(29563935-29563981)
chr3 (26-92)||(31788948-31789013)
chr3 (31-85)||(53412983-53413037)
chr3 (254-287)||(10134711-10134744)
chr3 (26-107)||(11090127-11090208)
chr3 (38-107)||(25035750-25035819)
chr3 (32-85)||(27093345-27093398)
chr3 (32-81)||(36010781-36010830)
chr3 (26-83)||(39253730-39253787)
chr3 (160-196)||(10360125-10360161)
chr3 (139-207)||(10681400-10681468)
chr3 (52-108)||(10969878-10969934)
chr3 (52-92)||(32151475-32151515)
chr3 (32-104)||(33899653-33899725)
[»] chr5 (27 HSPs)
chr5 (26-108)||(16773840-16773922)
chr5 (26-108)||(29075814-29075896)
chr5 (34-107)||(29173531-29173604)
chr5 (34-107)||(29210399-29210472)
chr5 (18-107)||(37258328-37258417)
chr5 (26-108)||(84857-84939)
chr5 (26-108)||(12877726-12877808)
chr5 (26-108)||(21589321-21589403)
chr5 (32-108)||(6844768-6844844)
chr5 (32-108)||(8278236-8278312)
chr5 (32-108)||(17028225-17028301)
chr5 (35-90)||(35360065-35360120)
chr5 (38-92)||(12669517-12669571)
chr5 (31-85)||(14285199-14285253)
chr5 (26-108)||(14495766-14495848)
chr5 (26-104)||(17761320-17761398)
chr5 (29-107)||(18206608-18206686)
chr5 (45-107)||(21701094-21701156)
chr5 (18-108)||(22020823-22020913)
chr5 (26-108)||(30000149-30000231)
chr5 (28-108)||(43442231-43442311)
chr5 (26-104)||(12883873-12883951)
chr5 (31-85)||(34984844-34984898)
chr5 (32-85)||(25627096-25627149)
chr5 (32-85)||(26078035-26078088)
chr5 (31-108)||(30109270-30109346)
chr5 (35-87)||(18437127-18437179)
[»] scaffold0258 (1 HSPs)
scaffold0258 (26-108)||(15284-15366)
[»] chr8 (27 HSPs)
chr8 (34-108)||(6536561-6536635)
chr8 (26-107)||(968395-968476)
chr8 (26-108)||(16852373-16852455)
chr8 (26-108)||(18540331-18540413)
chr8 (26-106)||(3305151-3305231)
chr8 (45-108)||(7347889-7347952)
chr8 (32-108)||(11819815-11819891)
chr8 (32-104)||(13129707-13129779)
chr8 (35-107)||(31408084-31408156)
chr8 (26-97)||(23361621-23361692)
chr8 (26-108)||(8485032-8485114)
chr8 (26-107)||(6569733-6569814)
chr8 (31-108)||(28783098-28783175)
chr8 (32-108)||(44780075-44780151)
chr8 (28-107)||(11492035-11492114)
chr8 (33-104)||(29858014-29858085)
chr8 (29-107)||(10287511-10287589)
chr8 (61-107)||(28560674-28560720)
chr8 (31-85)||(33017252-33017306)
chr8 (31-108)||(8794307-8794383)
chr8 (35-92)||(18897208-18897265)
chr8 (34-91)||(35287757-35287814)
chr8 (32-105)||(35641865-35641938)
chr8 (31-68)||(38661917-38661954)
chr8 (32-108)||(29431050-29431126)
chr8 (32-108)||(34966811-34966887)
chr8 (26-86)||(35690047-35690107)
[»] chr7 (41 HSPs)
chr7 (38-108)||(21558173-21558243)
chr7 (32-108)||(2446347-2446423)
chr7 (17-108)||(17040973-17041064)
chr7 (26-91)||(5934154-5934219)
chr7 (33-108)||(7309396-7309470)
chr7 (26-108)||(37473647-37473729)
chr7 (31-108)||(17113833-17113910)
chr7 (26-87)||(23552151-23552212)
chr7 (31-108)||(30579373-30579450)
chr7 (32-85)||(37162334-37162387)
chr7 (18-107)||(45709670-45709759)
chr7 (26-107)||(48771971-48772052)
chr7 (32-108)||(27313695-27313771)
chr7 (32-104)||(42711997-42712069)
chr7 (32-108)||(43590946-43591022)
chr7 (26-85)||(25655212-25655271)
chr7 (26-85)||(26459394-26459453)
chr7 (26-108)||(39631877-39631959)
chr7 (34-108)||(41519226-41519299)
chr7 (54-108)||(42261006-42261060)
chr7 (34-108)||(45228986-45229060)
chr7 (18-92)||(49050468-49050542)
chr7 (26-107)||(3174960-3175041)
chr7 (34-107)||(43215225-43215298)
chr7 (31-91)||(5830581-5830641)
chr7 (51-107)||(41975945-41976001)
chr7 (29-108)||(9183152-9183231)
chr7 (32-91)||(37117132-37117191)
chr7 (29-108)||(38851292-38851370)
chr7 (34-92)||(2882991-2883049)
chr7 (26-108)||(7721402-7721484)
chr7 (26-108)||(15905635-15905716)
chr7 (26-108)||(22035431-22035513)
chr7 (26-92)||(28646999-28647064)
chr7 (26-108)||(42262056-42262138)
chr7 (26-107)||(26703158-26703239)
chr7 (26-71)||(37085547-37085592)
chr7 (43-108)||(41487409-41487474)
chr7 (28-108)||(25590646-25590726)
chr7 (52-92)||(36173090-36173130)
chr7 (35-107)||(47902410-47902481)
[»] chr6 (22 HSPs)
chr6 (26-108)||(12188264-12188346)
chr6 (32-108)||(1056646-1056722)
chr6 (28-107)||(3715487-3715566)
chr6 (27-108)||(6758383-6758464)
chr6 (26-107)||(33549137-33549218)
chr6 (32-108)||(21418509-21418585)
chr6 (30-105)||(30127437-30127512)
chr6 (26-108)||(24641151-24641233)
chr6 (28-92)||(13227135-13227199)
chr6 (26-90)||(16405118-16405182)
chr6 (26-108)||(20213074-20213156)
chr6 (26-108)||(22107097-22107179)
chr6 (26-107)||(12234469-12234550)
chr6 (35-107)||(9583408-9583479)
chr6 (32-108)||(18562599-18562675)
chr6 (52-108)||(24256783-24256839)
chr6 (26-78)||(34786445-34786497)
chr6 (26-108)||(31622952-31623034)
chr6 (34-71)||(346571-346608)
chr6 (26-107)||(6385895-6385976)
chr6 (43-108)||(18263890-18263955)
chr6 (34-87)||(28841455-28841508)
[»] chr4 (33 HSPs)
chr4 (26-108)||(28635729-28635811)
chr4 (26-104)||(39509103-39509181)
chr4 (34-108)||(7949415-7949489)
chr4 (26-108)||(30938180-30938262)
chr4 (22-108)||(47386752-47386838)
chr4 (27-108)||(12793872-12793953)
chr4 (32-108)||(8030165-8030241)
chr4 (32-104)||(13015466-13015538)
chr4 (28-107)||(21660106-21660185)
chr4 (28-107)||(21668870-21668949)
chr4 (28-74)||(12798719-12798765)
chr4 (26-108)||(37274420-37274502)
chr4 (26-108)||(38869801-38869883)
chr4 (26-107)||(51250484-51250565)
chr4 (26-85)||(23377989-23378048)
chr4 (26-85)||(37109335-37109394)
chr4 (26-107)||(37443735-37443813)
chr4 (257-311)||(17848916-17848970)
chr4 (26-87)||(2622377-2622438)
chr4 (31-108)||(7292759-7292836)
chr4 (31-108)||(13901780-13901857)
chr4 (32-104)||(9936926-9936998)
chr4 (35-107)||(41683791-41683863)
chr4 (35-97)||(4185135-4185197)
chr4 (31-85)||(8306523-8306577)
chr4 (62-104)||(29312229-29312271)
chr4 (34-107)||(19531964-19532037)
chr4 (26-107)||(31826642-31826723)
chr4 (34-107)||(46295138-46295211)
chr4 (32-85)||(51969056-51969109)
chr4 (32-104)||(19238542-19238614)
chr4 (76-108)||(49938797-49938829)
chr4 (32-108)||(51954153-51954229)
[»] chr1 (46 HSPs)
chr1 (26-108)||(8177143-8177225)
chr1 (38-107)||(3799951-3800020)
chr1 (32-108)||(24047063-24047139)
chr1 (26-108)||(12587303-12587384)
chr1 (34-107)||(27476733-27476806)
chr1 (26-107)||(50901615-50901695)
chr1 (28-108)||(2799897-2799977)
chr1 (32-92)||(21547457-21547517)
chr1 (37-108)||(17745218-17745288)
chr1 (29-95)||(33700747-33700813)
chr1 (26-108)||(44126428-44126510)
chr1 (35-108)||(1094567-1094640)
chr1 (35-108)||(39979126-39979199)
chr1 (32-108)||(6122833-6122909)
chr1 (32-108)||(18037574-18037650)
chr1 (28-104)||(51814529-51814605)
chr1 (26-85)||(8904447-8904506)
chr1 (26-108)||(6650628-6650710)
chr1 (26-108)||(10526856-10526938)
chr1 (27-89)||(17439951-17440013)
chr1 (26-108)||(40810500-40810582)
chr1 (34-104)||(40814373-40814443)
chr1 (26-87)||(17410264-17410325)
chr1 (26-107)||(25494031-25494112)
chr1 (31-108)||(40257437-40257514)
chr1 (32-108)||(31794225-31794301)
chr1 (35-107)||(44961807-44961879)
chr1 (26-85)||(15786304-15786363)
chr1 (26-85)||(22049812-22049871)
chr1 (45-108)||(29753701-29753764)
chr1 (32-107)||(52116743-52116818)
chr1 (29-107)||(6948039-6948117)
chr1 (34-108)||(23398981-23399055)
chr1 (32-106)||(23566302-23566376)
chr1 (26-108)||(36124866-36124948)
chr1 (36-73)||(2220015-2220052)
chr1 (32-85)||(3265963-3266016)
chr1 (35-108)||(7219879-7219952)
chr1 (26-71)||(12259293-12259338)
chr1 (35-108)||(14787297-14787370)
chr1 (27-108)||(25297806-25297887)
chr1 (34-107)||(42949254-42949327)
chr1 (29-74)||(51703815-51703860)
chr1 (32-108)||(16893433-16893509)
chr1 (36-92)||(31605825-31605881)
chr1 (31-107)||(36371508-36371584)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-104)||(106073-106159)
[»] chr2 (26 HSPs)
chr2 (34-108)||(1435105-1435178)
chr2 (26-108)||(25637184-25637266)
chr2 (32-108)||(23052484-23052560)
chr2 (32-107)||(19016070-19016145)
chr2 (403-446)||(26910696-26910739)
chr2 (26-108)||(33582006-33582088)
chr2 (26-104)||(39715025-39715103)
chr2 (32-85)||(11062399-11062452)
chr2 (28-85)||(14500312-14500369)
chr2 (26-107)||(42327357-42327438)
chr2 (35-107)||(3677315-3677387)
chr2 (32-108)||(21303955-21304031)
chr2 (32-107)||(21195638-21195713)
chr2 (26-108)||(16918539-16918621)
chr2 (26-92)||(21213802-21213868)
chr2 (26-108)||(37480108-37480190)
chr2 (34-108)||(41908599-41908673)
chr2 (26-108)||(42602587-42602669)
chr2 (31-69)||(42860386-42860424)
chr2 (35-108)||(4060175-4060248)
chr2 (35-72)||(7599978-7600015)
chr2 (26-107)||(12086091-12086172)
chr2 (61-106)||(37971963-37972008)
chr2 (36-108)||(2750587-2750659)
chr2 (32-108)||(7798997-7799072)
chr2 (26-106)||(19244142-19244222)
[»] scaffold0299 (1 HSPs)
scaffold0299 (26-74)||(11561-11609)
[»] scaffold0068 (1 HSPs)
scaffold0068 (45-107)||(12754-12816)
[»] scaffold0074 (1 HSPs)
scaffold0074 (34-95)||(45733-45794)
[»] scaffold0008 (1 HSPs)
scaffold0008 (26-107)||(49339-49420)
[»] scaffold0417 (1 HSPs)
scaffold0417 (26-104)||(10252-10330)
[»] scaffold0032 (1 HSPs)
scaffold0032 (29-107)||(112318-112396)
[»] scaffold0368 (1 HSPs)
scaffold0368 (34-107)||(14927-15000)
[»] scaffold0194 (1 HSPs)
scaffold0194 (28-73)||(13042-13087)
[»] scaffold1367 (1 HSPs)
scaffold1367 (26-74)||(835-883)
[»] scaffold0291 (1 HSPs)
scaffold0291 (27-71)||(2468-2512)
[»] scaffold0118 (1 HSPs)
scaffold0118 (28-108)||(41594-41674)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-70)||(19846-19890)


Alignment Details
Target: chr3 (Bit Score: 296; Significance: 1e-166; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 122 - 449
Target Start/End: Original strand, 11772587 - 11772914
Alignment:
Q  122 atagttgtcattgatatccacaagattgtatttacttggctaatattcagtttgcattttattatcatttgaatgcatctttgtatgtttccttcctaat 221  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11772587 atagttgcaattgatagccacaagattgtatttacttggctaatattcagtttgcattttattatcatttgaatgcatctttgtatgtttccttcctaat 11772686  T
Q  222 aacctgctgcatgatcccgttagacaaggtagaatgcagtaggatttgtaatattcttaatttgtagctttaagtgaatgttcatatgatactgtttcaa 321  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11772687 aacctgctgcatgatcccgttagacaaagtagaatgcattaggatttgtaatattcttaatttgtagctttaagtgaatgttcatatgatactgtttcaa 11772786  T
Q  322 attttctgtttcactgctttgttagcatgtgcgatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaa 421  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11772787 attttctgtttcactgctttgttagcatgtgtaatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaa 11772886  T
Q  422 cttgtttgagtaacataaacattgatgt 449  Q
    ||||||||||||||||||| ||||||||    
T  11772887 cttgtttgagtaacataaagattgatgt 11772914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 316 - 449
Target Start/End: Complemental strand, 11778630 - 11778497
Alignment:
Q  316 tttcaaattttctgtttcactgctttgttagcatgtgcgatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatat 415  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11778630 tttcaaattttctgtttcactgctttgttagcatgtgtaatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatat 11778531  T
Q  416 tggcaacttgtttgagtaacataaacattgatgt 449  Q
    ||||||||||||||||||||||||| ||||||||    
T  11778530 tggcaacttgtttgagtaacataaagattgatgt 11778497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 11778697 - 11778628
Alignment:
Q  122 atagttgtcattgatatccacaagattgtatttacttggctaatattcagtttgcattttattatcattt 191  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11778697 atagttgcaattgatagccacaagattgtatttacttggctaatattcagtttgcattttattatcattt 11778628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 44743898 - 44743816
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| ||||  |||||||||| ||||||||||| ||||||||||    
T  44743898 gggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 36720414 - 36720480
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  36720414 gggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtggg 36720480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 52770026 - 52769944
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||||| | ||| ||||||||||||| |||| ||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

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Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 2667895 - 2667977
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||||||||  |||||||||| ||| |||||||| ||||| ||| ||||||||||||| || | ||||||||||    
T  2667895 gggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagcttcttc 2667977  T

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Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 4844554 - 4844472
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||||  ||||||||||  ||||| |||| ||||||||||    
T  4844554 gggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4844472  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 4870250 - 4870168
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||||  ||||||||||  ||||| |||| ||||||||||    
T  4870250 gggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4870168  T

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Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 10445182 - 10445100
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||| |||| |||||  ||||| |||| ||||||||||    
T  10445182 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc 10445100  T

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Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8075164 - 8075088
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||||||| ||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  8075164 tgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8075088  T

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Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 9853337 - 9853417
Alignment:
Q  266 tttgtaatattcttaatttgtagctttaag-tgaatgttcatatgatactgtttcaaattttctgtttcactgctttgtta 345  Q
    ||||||||||||||||||||| |||||||  |||||| | |||||||||||||| |||| ||||||| || ||||||||||    
T  9853337 tttgtaatattcttaatttgttgctttaaactgaatgctaatatgatactgtttgaaatcttctgttccattgctttgtta 9853417  T

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Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 47454658 - 47454578
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| |||||||||| ||||||||||| ||| ||||||||||| |   ||||||||||||||||||| | ||||||||||    
T  47454658 gatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 47454578  T

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Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28703455 - 28703388
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||| |||||||||||||||||| ||| || |||| ||| |||||||||||||| ||||||||||    
T  28703455 attagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

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Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 14339643 - 14339725
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| |||||||||||| |||||| | || ||| ||||||||||| || ||||||||| ||||||| |||| ||||||||||    
T  14339643 gggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 14339725  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 30311339 - 30311421
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||| ||| |||||||||||| | ||||||||||  | |||||| | ||||||||||    
T  30311339 gggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggttagtttagcttcttc 30311421  T

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Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 46518661 - 46518743
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||||||| ||| ||||||||||  |||||||||  | |||||| | ||||||||||    
T  46518661 gggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggttagtttagcttcttc 46518743  T

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Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 51903921 - 51903839
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||| ||| ||| |||||||||||||  ||| ||||||  ||||| |||| ||||||||||    
T  51903921 gggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

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Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 9842392 - 9842480
Alignment:
Q  266 tttgtaatattcttaatttgtagcttt-aagtgaatgttcatatgatactgtttcaaattttctgtttcactgctttgttagcatgtgc 353  Q
    ||||||||||||||||||||| ||||| || | |||| | |||||||||||||| |||| ||||||| |  |||||||||| |||||||    
T  9842392 tttgtaatattcttaatttgttgctttaaactaaatgctaatatgatactgtttgaaatcttctgttccgttgctttgttatcatgtgc 9842480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 10264627 - 10264691
Alignment:
Q  228 ctgcatgatcccgttagacaaggtagaatgcagtaggatttgtaatattcttaatttgtagcttt 292  Q
    |||||||||||  | |||||| ||| |||| ||||||||||||||||||||||||||||| ||||    
T  10264627 ctgcatgatccgatcagacaaagtacaatgtagtaggatttgtaatattcttaatttgtaacttt 10264691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 2709410 - 2709492
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||| ||| |||| ||||||||||||| | ||| ||||||||||  ||||||||| |||| |||| | ||||||||||    
T  2709410 gggatctggaagtatgctcctcctcgaggttttaggtttgattctctctgatgccaatttgggtgagttagtttagcttcttc 2709492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 8051247 - 8051313
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||| |||  |||||||||||| ||||    
T  8051247 gggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttggg 8051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 416
Target Start/End: Original strand, 10093259 - 10093364
Alignment:
Q  309 gatactgtttcaaattttctgtttcactgctttgttagcatgtgcgat-ataaagcatagataaacggaacaagtagtataatccatgctgctattggtt 407  Q
    |||||||||| |||| ||||||| |||||||||||||| |||||  |  || ||||||| ||||| ||||||||||| | ||||||   || ||||||||    
T  10093259 gatactgtttgaaatattctgttccactgctttgttagtatgtggaaacatgaagcataaataaatggaacaagtagaagaatcca---tgttattggtt 10093355  T
Q  408 ctaaatatt 416  Q
    |||||||||    
T  10093356 ctaaatatt 10093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 10130843 - 10130889
Alignment:
Q  251 tagaatgcagtaggatttgtaatattcttaatttgtagctttaagtg 297  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  10130843 tagaatgcggtagggtttgtaatattcttaatttgtagcttttagtg 10130889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 10372172 - 10372126
Alignment:
Q  251 tagaatgcagtaggatttgtaatattcttaatttgtagctttaagtg 297  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  10372172 tagaatgcggtagggtttgtaatattcttaatttgtagcttttagtg 10372126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 4222174 - 4222243
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggtta 95  Q
    |||||||||||||||||| |||||| | || | | |||||||||||||| ||| ||||||||||| ||||    
T  4222174 gggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgagtta 4222243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 10093190 - 10093247
Alignment:
Q  254 aatgcagtaggatttgtaatattcttaatttgtagctttaagtgaatgttcatatgat 311  Q
    ||||||||||| ||||||||||||||  ||||||||||||||  |||| |||||||||    
T  10093190 aatgcagtagggtttgtaatattcttgctttgtagctttaagcaaatgctcatatgat 10093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 10200072 - 10200129
Alignment:
Q  254 aatgcagtaggatttgtaatattcttaatttgtagctttaagtgaatgttcatatgat 311  Q
    ||||||||||| ||||||||||||||  ||||||||||||||  |||| |||||||||    
T  10200072 aatgcagtagggtttgtaatattcttgctttgtagctttaagcaaatgctcatatgat 10200129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 37788500 - 37788428
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| |||||| |||| ||| |||||||||||||| |||||||||| |  |||||||| |||||||||    
T  37788500 ggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt-gaggggttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 3427593 - 3427537
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||||| |||||| |||| |||  ||||||||||||| ||||||||||    
T  3427593 atctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaattt 3427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 10532589 - 10532657
Alignment:
Q  139 ccacaagattgtatttacttggctaatattcagtttgcattttattatcatttgaatgcatctttgtat 207  Q
    ||||||||||| ||||| ||  | ||| ||||||||| ||||| |||||||||| ||||||||||||||    
T  10532589 ccacaagattggatttaattaaccaattttcagtttgtattttcttatcatttgtatgcatctttgtat 10532657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 27259194 - 27259242
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||||    
T  27259194 gggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctct 27259242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 44069793 - 44069873
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| |||||||||| |||||| |||| ||| ||| |||||| ||  ||||||||||||||||| || | ||||||||||    
T  44069793 gatcttggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttc 44069873  T

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Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 49397578 - 49397502
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||||||||| ||| |||||||| |||    || ||||||||||||  |||| ||||||||||    
T  49397578 tgggagtgtgcttctcctcgaggtctcatgttcgattatcttagatgtcaatttaggtggactaatttagcttcttc 49397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 10200141 - 10200228
Alignment:
Q  309 gatactgtttcaaattttctgtttcactgctttgttagcatgtgcgat-ataaagcatagataaacggaacaagtagtataatccatg 395  Q
    |||||||||| |||| ||||||| |||||||||||||| |||||  |  || ||||||| ||||| ||||||||||| | ||||||||    
T  10200141 gatactgtttgaaatattctgttccactgctttgttagtatgtggaaacatgaagcataaataaatggaacaagtagaagaatccatg 10200228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 15048104 - 15048045
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||| |||||| |||||| |||| ||| |||||||| ||||| ||||||||||    
T  15048104 gggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaattt 15048045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 31520657 - 31520570
Alignment:
Q  17 cattagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||| ||| |||||||||||||||||| ||||||||||| | | ||| |||||||||  ||| ||||||  ||||| |||| ||||||    
T  31520657 cattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggctaatttagctt 31520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 39042028 - 39041958
Alignment:
Q  21 agctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||| ||||||| ||||| |||| ||||  ||||| |||||||||||||||||| |||||||||| ||||||    
T  39042028 agcttgggatcttggagtttgctcctcca-gaggtctcaagttcgattctctctggtgccaatttcggtggg 39041958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 8853850 - 8853760
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| ||||  ||||||| |||| ||||| ||||| ||| ||||||| |||  | |||||||||| ||||||||||| || |||||||    
T  8853850 attagcttgggacatgggagtatgctcctccttgaggtctcatgttcgatcctccttggtgccaatttgggtgggttaatttaacttcttc 8853760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 10130689 - 10130727
Alignment:
Q  274 attcttaatttgtagctttaagtgaatgttcatatgata 312  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  10130689 attcttaatttgtaactttaagtgaatgctcatatgata 10130727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 10372326 - 10372288
Alignment:
Q  274 attcttaatttgtagctttaagtgaatgttcatatgata 312  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  10372326 attcttaatttgtaactttaagtgaatgctcatatgata 10372288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 10499152 - 10499070
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| ||||  |||| ||||| ||| |||||||||||||   || |||||| |||||| |||| ||||||||||    
T  10499152 gggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 14186688 - 14186746
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||||| |||||| |||| ||| |||||||||||||  ||| |||||||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtggg 14186746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 28531101 - 28531023
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    ||||||||||||| |||| ||||||||||| | | | || ||||||||| ||| |||||| |||||| |||| ||||||    
T  28531101 gggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaatttagctt 28531023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 29563935 - 29563981
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    ||||||| ||||||||||||||||| || ||| ||||||||||||||    
T  29563935 gatctggaagtgtgcttctcctcgaagtctcaggttcgattctctct 29563981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 31789013 - 31788948
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||||||||||||| ||||||||||||| | ||| |||| |||| |||| |||||| ||||||    
T  31789013 gggatctgggagtgtgctcctcctcgaggttttaggtttgattatctc-tgtgtcaatttgggtggg 31788948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 53412983 - 53413037
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||| |||||| |||| ||| |||| ||||||||| ||||||||||    
T  53412983 ctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 53413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 287
Target Start/End: Original strand, 10134711 - 10134744
Alignment:
Q  254 aatgcagtaggatttgtaatattcttaatttgta 287  Q
    ||||||||||| ||||||||||||||||||||||    
T  10134711 aatgcagtagggtttgtaatattcttaatttgta 10134744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11090208 - 11090127
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||| |||||| ||||||||||| | |  ||||||||| ||  ||| ||||||| || ||||||| |||||||||    
T  11090208 gggatctgggaatgtgctcctcctcgaggtcttagtttcgattctttcgagtgtcaatttaagtaggttaatttagcttctt 11090127  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 25035750 - 25035819
Alignment:
Q  38 tgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||| ||||||||| ||||| ||||||||||| |  ||| |||||| ||||||||||| || ||||||    
T  25035750 tgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaatttgggtgggttaatttaccttctt 25035819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 27093398 - 27093345
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||| |||||| |||| ||| ||| |||||||||| ||||||||||    
T  27093398 tgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 27093345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 36010781 - 36010830
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgcca 81  Q
    |||||||||||| |||||| | || |||||||||||||||||| ||||||    
T  36010781 tgggagtgtgctcctcctcaaagtctcaagttcgattctctctggtgcca 36010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 39253730 - 39253787
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaat 83  Q
    |||||||||||||||||| ||| || |||| ||| ||||||||||||||  |||||||    
T  39253730 gggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 10360161 - 10360125
Alignment:
Q  160 gctaatattcagtttgcattttattatcatttgaatg 196  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  10360161 gctaatagtcagtttgtattttattatcatttgaatg 10360125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 10681400 - 10681468
Alignment:
Q  139 ccacaagattgtatttacttggctaatattcagtttgcattttattatcatttgaatgcatctttgtat 207  Q
    ||||||||||| ||||| ||  | ||| ||||||||| ||||| | |||||||| ||||||||||||||    
T  10681400 ccacaagattggatttaattaaccaattttcagtttgtattttctgatcatttgcatgcatctttgtat 10681468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 10969934 - 10969878
Alignment:
Q  52 aggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  10969934 aggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc 10969878  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 32151475 - 32151515
Alignment:
Q  52 aggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||||||| ||||||||||||| |||||||||| ||||||    
T  32151475 aggtttcaaattcgattctctctagtgccaatttcggtggg 32151515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 33899653 - 33899725
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||| |||||| |||| ||| |||||||||||| | ||| |||||| |||| | |||| ||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagctt 33899725  T

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Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 16773840 - 16773922
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| ||||||||||| ||| ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  16773840 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 29075814 - 29075896
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||| |||| |||| ||||||||||    
T  29075814 gggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 29173531 - 29173604
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| ||||||||||||||| |||||||| ||||| ||| ||||||||||||| |||| |||||||||    
T  29173531 ggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 29210399 - 29210472
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||  ||||||||||||  |||| |||||||||    
T  29210399 ggagtgtgctcctcctcgaggtttcaagttcaattctctctggtatcaatttaggtggactaatttagcttctt 29210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 37258417 - 37258328
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||| ||||||| |||||||||| |||||| |||||||| |||||||||||||| ||| ||||||  | |||||| | |||||||||    
T  37258417 attagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 84857 - 84939
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||| |  |||||| | | |||||| |||| ||||||||||    
T  84857 gggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttcttc 84939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12877726 - 12877808
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| |||||||||| |||||||| | || ||| |||||||||||||| || | |||||||||||| |||| ||||||||||    
T  12877726 gggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 21589321 - 21589403
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||| |||| |||||||| || ||| ||||||||| |||| ||||||||||||||||| || | ||||||||||    
T  21589321 gggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 6844768 - 6844844
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| | ||||||||||| | | |||||||| ||||| |||||||||||||||| ||| | ||||||||||    
T  6844768 tgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttaggtggattagtttagcttcttc 6844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8278312 - 8278236
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||||||| | ||||||| |||| ||||  ||||| ||||||||||| |||| ||||||||||    
T  8278312 tgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagcttcttc 8278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 17028301 - 17028225
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| ||| ||| ||||| |||| ||| ||||||||||||| |||| ||||||||||    
T  17028301 tgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 35360120 - 35360065
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtg 90  Q
    ||||||||||||||||||||| ||| ||||||||||| |  |||||||||||||||    
T  35360120 gagtgtgcttctcctcgaggtctcaggttcgattctcaccggtgccaatttaggtg 35360065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 12669517 - 12669571
Alignment:
Q  38 tgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||||||| ||  ||||||||||||||||||||||| ||| |||||||||||||    
T  12669517 tgtgcttcttcttaaggtttcaagttcgattctctctggtgtcaatttaggtggg 12669571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 14285199 - 14285253
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  14285199 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 14495848 - 14495766
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||||| |||  || |||||||||   ||||||||||| |||| || | ||||||||||    
T  14495848 gggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagtttagcttcttc 14495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 17761398 - 17761320
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||||||||| ||||| || |||| | | ||||||||||   |||||||||||| ||||||||| ||||||    
T  17761398 gggatctgggagtgtgctcctccttgaagttttaggatcgattctcttcggtgccaatttagatgggttaatttagctt 17761320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 18206686 - 18206608
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||||| |||||  ||||| ||  ||||| ||||||| |||||||||| |||||| |||| |||||||||    
T  18206686 atctgggagtgtgctcctcctttaggttccagattcgactctctctagtgccaatttgggtgggctaatttagcttctt 18206608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 21701156 - 21701094
Alignment:
Q  45 ctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| | |||||||||||||||||  || || |||||||||||||||| |||||||||    
T  21701156 ctcctcgagatctcaagttcgattctctccggtaccgatttaggtgggttaatttagcttctt 21701094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 22020913 - 22020823
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||||||||||||||||| ||||| || || |||  ||||||||||||  |||  |||||||||||| |||| ||| ||||||    
T  22020913 attagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatttagtttcttc 22020823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 30000149 - 30000231
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| |||||| |||  ||||||||||| ||| |||||| |||||||  |||||||||| |||||||||| || |||||||    
T  30000149 gggatccgggagtatgcacctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttcttc 30000231  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 43442231 - 43442311
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||||  || |||||| | |||| |||| ||| ||||||    
T  43442231 gatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttc 43442311  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 12883873 - 12883951
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||||||||| ||||| ||||| ||| |||| ||||||||   |  |||||| ||||||||||| ||||||    
T  12883873 gggatctgggagtgtgctcctccttgaggtctcatgttcaattctctccaatatcaattttggtgggttaatttagctt 12883951  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 34984844 - 34984898
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||| |||||| |||| | | |||||||||||||| ||||||||||    
T  34984844 ctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaattt 34984898  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 25627096 - 25627149
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||| |||||| |||| ||| |||||||||||||| ||| ||||||    
T  25627096 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26078088 - 26078035
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||| |||||||| || |||| ||| |||||||||||||| ||||||||||    
T  26078088 tgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaattt 26078035  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 30109346 - 30109270
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| ||||| ||||| ||| ||||||||| | |  |||| |||||||||||| |||| ||||||||||    
T  30109346 ctgggagtgtgctcctccttgaggtctcaggttcgattc-ccccggtgctaatttaggtgggctaatttagcttcttc 30109270  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 18437127 - 18437179
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttag 87  Q
    ||||||||| |||||| | |||||  |||||||||||||| ||||||||||||    
T  18437127 gagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaatttag 18437179  T

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Target: scaffold0258 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 15366 - 15284
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||   |||||||||||||||| |||| ||||||||||    
T  15366 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttc 15284  T

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Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 6536561 - 6536635
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| |||||| |||| ||| |||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  6536561 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 968395 - 968476
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||   |||||||||||||||| |||| |||||||||    
T  968395 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 16852373 - 16852455
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||  | ||||||||||||||||| || | ||||||||||    
T  16852373 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttcttc 16852455  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 18540331 - 18540413
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||||| ||||||||| |||| ||| |||||||||||||| ||||||||||  | |||||||| ||||||||||    
T  18540331 gggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttc 18540413  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 3305231 - 3305151
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttct 106  Q
    |||||||||||| ||||| |||||| |||| |||| ||||||| ||||| ||||||||||||||||| |||| || |||||    
T  3305231 gggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaatttatcttct 3305151  T

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Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 7347889 - 7347952
Alignment:
Q  45 ctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| ||||||||| |||| ||||||||||||| ||||||||||||| |||| ||||||||||    
T  7347889 ctccttgaggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttcttc 7347952  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 11819815 - 11819891
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| ||| ||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  11819815 tgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttc 11819891  T

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Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 13129707 - 13129779
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||| ||| |||||| |||||||| |||||||||||||| |||||||||| | ||| ||||| ||||||    
T  13129707 tgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttggatggattaatttagctt 13129779  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 31408156 - 31408084
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| |||||| |||||||| ||||||||||||||  || ||||||| | |||||||| |||||||||    
T  31408156 gagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 23361692 - 23361621
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaat 97  Q
    ||||| |||||||||||| |||||| |||| ||| |||| ||||||||| ||| ||||||||||||| ||||    
T  23361692 gggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaat 23361621  T

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Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 8485032 - 8485114
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| ||| | ||||| |||  ||||||||||||  ||||||||||||||||| |||| ||||||||||    
T  8485032 gggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttc 8485114  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 6569814 - 6569733
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||| | ||| ||||||  | |||||| | |||||||||    
T  6569814 gggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaatttgagggggttagtttagcttctt 6569733  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 28783098 - 28783175
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| |||||| |||| ||| |||||||||||    |||||||||| |||||| |||| ||||||||||    
T  28783098 ctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagcttcttc 28783175  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 44780151 - 44780075
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| ||| ||| ||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  44780151 tgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttc 44780075  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 11492114 - 11492035
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||| || |||||||| | | ||||||||||||   ||| |||||| |||||| |||| |||||||||    
T  11492114 gatctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 29858085 - 29858014
Alignment:
Q  33 gggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    ||||||||||| ||||||||||| ||| ||||||||| |    ||||||||||||||||| |||| ||||||    
T  29858085 gggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatttagctt 29858014  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 10287511 - 10287589
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||| |||||||||||||||||||| ||| |||| ||||||  || |  ||||||||||||| |||| || ||||||    
T  10287511 atctggaagtgtgcttctcctcgaggtctcaggttcaattctcctttatatcaatttaggtgggctaatttatcttctt 10287589  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 28560674 - 28560720
Alignment:
Q  61 gttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||| |||| ||||||||||||||||| ||| |||||    
T  28560674 gttcgattctctctagtgctaatttaggtgggttaatttagtttctt 28560720  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 33017252 - 33017306
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||| |||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  33017252 ctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 8794383 - 8794307
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||| ||||||  ||| ||| |||||||||||||| || |||||||| | |||||||| ||||||||||    
T  8794383 ctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaatttaag-gggttaatttagcttcttc 8794307  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 18897208 - 18897265
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||||||| |||||| |||| ||| ||||||||||  || |||||||||||||||||    
T  18897208 gagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaatttaggtggg 18897265  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 35287757 - 35287814
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgg 91  Q
    |||||||||| |||||| |||| ||| |||||||||||||  |||||||||| |||||    
T  35287757 ggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggtgg 35287814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 35641938 - 35641865
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttc 105  Q
    |||||||||||| |||||||| || ||| |||||||||||||  |  ||||||||| |||| |||| |||||||    
T  35641938 tgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatgggctaatttagcttc 35641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 38661917 - 38661954
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgatt 68  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  38661917 ctgggagtgtgcttctcctcgaagtttcaggttcgatt 38661954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 29431050 - 29431126
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||| ||||  ||| |||||||||||| | |||| |||||  ||||| |||| ||||||||||    
T  29431050 tgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatttagcttcttc 29431126  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 34966887 - 34966811
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||| ||||||| ||||||| |||| || |  ||| || |||||||||| |||| ||||||||||    
T  34966887 tgggagtgtgctactcttcgaggtctcaagtttgattatccccggtggcattttaggtgggctaatttagcttcttc 34966811  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 35690107 - 35690047
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattta 86  Q
    |||||||||| || |||| |||||| |||| ||| |||||||||||||| ||| |||||||    
T  35690107 gggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattta 35690047  T

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Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  38 tgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| |||||| |||| ||| |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 2446347 - 2446423
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||||||| | |||||||||||||||||  ||||| ||||||||||| |||| ||||||||||    
T  2446347 tgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 2446423  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 17041064 - 17040973
Alignment:
Q  17 cattagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| |||||||| |||||| |||| ||| |||||||||||||  |||||||||| ||||||| ||| ||||||||||    
T  17041064 cattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttc 17040973  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 5934154 - 5934219
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgg 91  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| |||| ||| ||||||||||||    
T  5934154 gggatctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaatttaggtgg 5934219  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 7309396 - 7309470
Alignment:
Q  33 gggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||| ||||||||||| |||||||||||||||||  ||| ||||||| ||||| |||| ||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctc-cgtgtcaatttaagtgggctaatttagcttcttc 7309470  T

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Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 37473647 - 37473729
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| ||||| |||| ||||| ||||| ||| ||||||||||| ||  || |||||||||||||||||| ||||||||||    
T  37473647 gggatctaggagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttc 37473729  T

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Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 17113833 - 17113910
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||||| |||| ||||||||||||||||||  ||| |||||  | |||||| | ||||||||||    
T  17113833 ctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgagggggttagtttagcttcttc 17113910  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 23552151 - 23552212
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttag 87  Q
    |||| ||||||||||||| |||||| |||| ||||||||||||||||||  |||||||||||    
T  23552151 gggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaatttag 23552212  T

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Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 30579373 - 30579450
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| |  |||||| |||| ||| |||||||| ||||| ||||||||||||||||| |||| ||||||||||    
T  30579373 ctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttc 30579450  T

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Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 37162387 - 37162334
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||||| ||| |||| |||||||||||||||||| ||||||||||    
T  37162387 tgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaattt 37162334  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 45709759 - 45709670
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||| |||||||| ||||||||| ||||||||||| ||| |||||||| ||||   | |||||||||||||| |||  |||||||||    
T  45709759 attagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaacttagcttctt 45709670  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 48771971 - 48772052
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||| || |  || |||||||||||||| |||| |||||||||    
T  48771971 gggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggctaatttagcttctt 48772052  T

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Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 27313771 - 27313695
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||| |||||| ||||||||  |||||||||||||  |||||||||||||| | |||| ||||||||||    
T  27313771 tgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttc 27313695  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 42711997 - 42712069
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||| |||||| |||| ||| ||||||||||| || ||| ||||||||||||| |||| ||||||    
T  42711997 tgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaatttagctt 42712069  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 43590946 - 43591022
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| | || ||| ||||||||||| || ||||||||| ||||||| |||| ||||||||||    
T  43590946 tgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 43591022  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 25655271 - 25655212
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||| ||||||| | |||||| |||||||| |||||||||||||| ||||||||||    
T  25655271 gggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaattt 25655212  T

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Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 26459453 - 26459394
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||| ||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  26459453 gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

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Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 39631877 - 39631959
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||  ||| |||||| |||| ||| |||||||||||||||||||||||||  | |||||| | ||||||||||    
T  39631877 gggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggttagtttagcttcttc 39631959  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 41519299 - 41519226
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| |||||| |||| ||| ||||| |||||||| ||| ||||||||||||| |||| ||||||||||    
T  41519299 ggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaatttagcttcttc 41519226  T

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Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 42261060 - 42261006
Alignment:
Q  54 gtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| ||| |||||||||| |||||||||||||||||||| | ||||||||||    
T  42261060 gtttcaggtttgattctctctagtgccaatttaggtgggttagtttagcttcttc 42261006  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 45229060 - 45228986
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| || ||||||| | |||||||||||||  ||| ||||||| ||||| |||| ||||||||||    
T  45229060 ggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagcttcttc 45228986  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 49050542 - 49050468
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||||| |||||||| |||||| || ||||| ||||| ||| ||||||||||| |  |||||||||||||||||    
T  49050542 attagcttgggatctgcgagtgtactcctccttgaggtctcaggttcgattctccccggtgccaatttaggtggg 49050468  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 3174960 - 3175041
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||||||   |  |||||||| ||||||||| |||||||||    
T  3174960 gggatctgggagtgtgctccatctcgaggtctcaggttcgattctctccaatatcaatttagttgggttaatttagcttctt 3175041  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 43215225 - 43215298
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| |||||| |||| ||| ||||||||||||||| |||||||||  | |||||| | |||||||||    
T  43215225 ggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggttagtttagcttctt 43215298  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 5830641 - 5830581
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgg 91  Q
    |||||||||| || |||||| || |||||||||||||| ||||| ||| ||||||||||||    
T  5830641 ctgggagtgtactcctcctcaagatttcaagttcgattatctctagtgtcaatttaggtgg 5830581  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 41975945 - 41976001
Alignment:
Q  51 gaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| |||| |||||||||    
T  41975945 gaggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 9183231 - 9183152
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||||| |||||| | || ||| |||||||| ||||| ||| |||||| |||||| |||| ||| ||||||    
T  9183231 atctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 37117191 - 37117132
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgg 91  Q
    ||||||||| || ||||| ||||||||  |||||||||||||  ||||||||||||||||    
T  37117191 tgggagtgtactcctccttgaggtttcgggttcgattctctccggtgccaatttaggtgg 37117132  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 38851292 - 38851370
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||||||  ||  |||| | |||||||||| ||||||||||    
T  38851292 atctgtgagtgtgcttctcctcaaggtttcatgtttgattctctctgttgttaattga-gtgggttaatttagcttcttc 38851370  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 2882991 - 2883049
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||||| |||||| |||| ||| |||| ||||||||| ||| |||||||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttaggtggg 2883049  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 7721402 - 7721484
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||||| || |||||| |||| ||| |||||||||||||| ||| |||||| | |||  |||| ||||||||||    
T  7721402 gggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagcttcttc 7721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 15905716 - 15905635
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||||  |||| ||| ||||||||||| ||  || |||||| ||||||||||| ||||||||||    
T  15905716 gggacctgggagtgtgctcctcctt-aggtctcaggttcgattctccctaatgtcaatttgggtgggttaatttagcttcttc 15905635  T

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Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 22035431 - 22035513
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| ||||||||||   || ||||||||||||| |||| ||||||| ||||  |||| ||||||||||    
T  22035431 gggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtcaatttaagtggactaatttagcttcttc 22035513  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 28646999 - 28647064
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    ||||||| ||||||||||||| ||| |||| ||| ||||||||| |||| |||||||||| ||||||    
T  28646999 gggatcttggagtgtgcttct-ctcaaggtctcaggttcgattccctctggtgccaatttcggtggg 28647064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 42262138 - 42262056
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||| ||||||||| |||||  |||| |||  ||| ||||||||||||||||| || | ||||||||| || |||||||    
T  42262138 gggatctgagagtgtgctcctcctaaaggtctcagattcaattctctcttgtgccaaattggatgggttaatttaccttcttc 42262056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 26703158 - 26703239
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||||| || |||||||| ||| ||||  || || ||  |||||||||||||||| |||| ||| |||||    
T  26703158 gggatctgggagtgtgctccttctcgaggtctcaggttcatttatccctaatgccaatttaggtgggctaatttagattctt 26703239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 37085592 - 37085547
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctc 71  Q
    ||||| ||||||||||||  |||||||||||||| |||||||||||    
T  37085592 gggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 41487409 - 41487474
Alignment:
Q  43 ttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||| |||| ||| ||||||||||  |  ||||||||||||||||| |||| ||||||||||    
T  41487409 ttctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 25590646 - 25590726
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||| ||||||||||| ||  |||||||| |||   ||| ||||||  ||||| |||| ||||||||||    
T  25590646 gatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggctaatttagcttcttc 25590726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 36173090 - 36173130
Alignment:
Q  52 aggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||| ||||||||| ||||||||||||||| ||||||    
T  36173090 aggtttcaggttcgattccctcttgtgccaattttggtggg 36173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 47902481 - 47902410
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||| ||| | |||||| |||||||||| | |  ||||||||||||||||||||| ||| |||||    
T  47902481 gagtgtgcttcttctcaaagtttcacgttcgattcttt-tcatgccaatttaggtgggttaatttagattctt 47902410  T

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Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 12188346 - 12188264
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  12188346 gggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 1056722 - 1056646
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| ||||  ||||| |||||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  1056722 tgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtgggttaatttagcttcttc 1056646  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 3715487 - 3715566
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||  ||| ||||||||||||| | || |||||||||    
T  3715487 gatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttaggtgggctgatttagcttctt 3715566  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 6758464 - 6758383
Alignment:
Q  27 ggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||||||| | ||||||||| ||||| |||||||||||| ||| |||||||||||||  ||| ||||||||||    
T  6758464 ggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggcaaatttagcttcttc 6758383  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 33549137 - 33549218
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||   |||||||||||||| | |||| |||||||||    
T  33549137 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 21418509 - 21418585
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| | || ||||||||||||||| || ||||||||| ||||||| |||| ||||||||||    
T  21418509 tgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 21418585  T

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Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 30127437 - 30127512
Alignment:
Q  30 tctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttc 105  Q
    |||||||||||||| ||| ||||||| ||| |||||||||| ||  |||||||||||||| ||||||| |||||||    
T  30127437 tctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 24641233 - 24641151
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||     |||||||||||||||| |||| || |||||||    
T  24641233 gggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaatttaacttcttc 24641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 13227199 - 13227135
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||||||||||| |||||||| || ||||||||||||||||| | || || ||||||||||    
T  13227199 gatctgggagtgtgctcctcctcgaagtctcaagttcgattctctcatatgtcagtttaggtggg 13227135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 16405118 - 16405182
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtg 90  Q
    |||| ||||||||||||||||||||||||| |||  |||||||||| | |||| |||||||||||    
T  16405118 gggacctgggagtgtgcttctcctcgaggtctcagtttcgattctcacctgtgtcaatttaggtg 16405182  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 20213074 - 20213156
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||||| | || ||| ||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  20213074 gggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 22107097 - 22107179
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||||| | || ||| ||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  22107097 gggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 12234550 - 12234469
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| ||||||||||||| |  |||||||| ||| |||||||||||||  ||| |||||||| |||| |||| |||||||||    
T  12234550 gggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 9583408 - 9583479
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| ||| || |||| || ||||||||||||||| |||||||||| ||||||||| | |||||||||    
T  9583408 gagtgtgctcctc-tcaaggtctccagttcgattctctctggtgccaatttcggtgggttagtttagcttctt 9583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 18562675 - 18562599
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||| ||| ||||| ||| ||||||| |  || |||||||||||||| |||| ||||||||||    
T  18562675 tgggagtgtgctcctccttgagatttcaggtttgattctcccaagtaccaatttaggtgggctaatttagcttcttc 18562599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 24256839 - 24256783
Alignment:
Q  52 aggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||||||||||||| ||| |||||||||| ||||| | ||||||||||    
T  24256839 aggtctcaagttcgattctctctggtgtcaatttaggtaggttagtttagcttcttc 24256783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 34786497 - 34786445
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtg 78  Q
    |||||||||||||||||| || ||||| || ||||||||||||||||| ||||    
T  34786497 gggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtg 34786445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 31623034 - 31622952
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| ||||||||||| ||| ||| || || |||  ||| |||||| |||||| |||| ||||||||||    
T  31623034 gggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagcttcttc 31622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 346571 - 346608
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctc 71  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  346571 ggagtgtgcttctcctcgaggtctcatgttcgattctc 346608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 6385895 - 6385976
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| |||||| |||||| |||||  |||| ||| |||||||||||||  |||| ||||| |||||| |||| |||||||||    
T  6385895 gggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 18263890 - 18263955
Alignment:
Q  43 ttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||||  || ||||||||||| |  ||||||||||||||||| |||| ||||||||||    
T  18263890 ttctccttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttc 18263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 28841455 - 28841508
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttag 87  Q
    |||||||||| |||||| |||| |||||||||||||||||  ||| ||||||||    
T  28841455 ggagtgtgctcctcctcaaggtctcaagttcgattctctccggtgtcaatttag 28841508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 28635729 - 28635811
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| ||||| ||||| | | |||||||||||||| |||||||||| |||||| |||| ||||||||||    
T  28635729 gggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 39509103 - 39509181
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||| |  ||| |||||||||||||||||| ||||||    
T  39509103 gggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 7949489 - 7949415
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| |||||| |||| ||| |||||||||||||| ||| ||||||||||||| |||| ||||||||||    
T  7949489 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 30938262 - 30938180
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||||||||| ||||||||||| ||| ||||||||||| |   ||||||||||||||||||| | ||||||||||    
T  30938262 gggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 30938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 47386838 - 47386752
Alignment:
Q  22 gctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||| |||||| || ||||| ||| |||| ||||||||| ||| ||||||||||||| |||| ||||||||||    
T  47386838 gctagggatctgagagtgcgcttcttcttgaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 12793953 - 12793872
Alignment:
Q  27 ggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||||||||  ||| ||| || | |||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  12793953 ggatctgtgagtgtgctcttccacgaagtattaagttcgattctctctggtgccaatttaggtgggctaatttagcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8030241 - 8030165
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| ||||||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  8030241 tgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 13015466 - 13015538
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||| |||||||| || ||| |||||||||||||  ||| |||||||||||||||||| ||||||    
T  13015466 tgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagctt 13015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 21660185 - 21660106
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||||||  |||||||||| |||||||||||| ||||| ||| |||||||||| |  |||| |||||||||    
T  21660185 gatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 21668949 - 21668870
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||||||  |||||||||| |||||||||||| ||||| ||| |||||||||| |  |||| |||||||||    
T  21668949 gatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21668870  T

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Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 12798719 - 12798765
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12798719 gatctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

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Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 37274502 - 37274420
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||||| |||| | | |||||||||||||| |||| |||||| ||||| |||| ||||||||||    
T  37274502 gggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttcttc 37274420  T

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Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 38869801 - 38869883
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||| ||| ||||||||| |||| ||||||||||  | |||||| | ||||||||||    
T  38869801 gggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 51250565 - 51250484
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||||||||| | |||| || | ||||||||||||| |||  |||||||||| |||||| |||| |||||||||    
T  51250565 gggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatttagcttctt 51250484  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 23377989 - 23378048
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||| ||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  23377989 gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 23378048  T

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Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 37109394 - 37109335
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||| ||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  37109394 gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

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Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 37443735 - 37443813
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||||| ||   ||||||||||||| |||||||| ||||| ||||||||||| ||||| |||| ||| |||||    
T  37443735 gggatctgggagtgtact---cctcgaggtttcatgttcgattatctctggtgccaatttatgtgggctaatttagtttctt 37443813  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 17848970 - 17848916
Alignment:
Q  257 gcagtaggatttgtaatattcttaatttgtagctttaagtgaatgttcatatgat 311  Q
    |||||| | ||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  17848970 gcagtaagctttgtaatattctgaatttgtagctgtaaatgaatgttcatatgat 17848916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 2622438 - 2622377
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttag 87  Q
    |||| ||||||||||||| |||||| | || ||| |||||||||||||| ||||||||||||    
T  2622438 gggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaatttag 2622377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 7292836 - 7292759
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| |||||| | || ||| |||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  7292836 ctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagtttagcttcttc 7292759  T

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Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 13901780 - 13901857
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||| | ||||| ||||| |||||||| ||||| |||  ||  ||||||||||||||||| ||||||||||    
T  13901780 ctgggagtgtgttcctccttgaggtctcaagttcaattctatctaatgttaatttaggtgggttaatttagcttcttc 13901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 9936998 - 9936926
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||| |||||||| |||||| ||||||||||| |   || |||||| ||||||||||| ||||||    
T  9936998 tgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggtgggttaatttagctt 9936926  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 41683791 - 41683863
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| || ||| | |||||| |||| ||||| ||| |||||||||||||||||||||| ||| |||||    
T  41683791 gagtgtgctccttctcaaagtttcacgttcaattctttctagtgccaatttaggtgggttaatttagtttctt 41683863  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 4185135 - 4185197
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaat 97  Q
    ||||||| | ||||||||||| ||||| ||||||||| || ||| ||||||||||||| ||||    
T  4185135 gagtgtgatcctcctcgaggtctcaagatcgattctccctagtgtcaatttaggtgggctaat 4185197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 8306523 - 8306577
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||| |||||||| || | |||||||||||||||| ||| ||||||    
T  8306523 ctgggagtgtgctcctcctcgaagtcttaagttcgattctctctagtgtcaattt 8306577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 29312271 - 29312229
Alignment:
Q  62 ttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||    
T  29312271 ttcgattctctctggtgccaatttaggtgggctaatttagctt 29312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 19532037 - 19531964
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| ||||| |||||  || ||||| ||||||||||||||  |||||||||||||||| |||| |||| ||||    
T  19532037 ggagcgtgctcctccttaagttttcaggttcgattctctctgatgccaatttaggtgggctaatttagcatctt 19531964  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 31826642 - 31826723
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||| || ||||||||| |||||| |||| ||||||||||||| || | ||| |||||| |||||| |||| || ||||||    
T  31826642 gggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtgggctaatttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 46295138 - 46295211
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| |||||| |||| ||| ||||||||||| |  |||||||||| |||||| || | |||||||||    
T  46295138 ggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 51969056 - 51969109
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||| |||||| |||||||| ||||  |||||||| ||||||||||    
T  51969056 tgggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaattt 51969109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 19238614 - 19238542
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||| ||||||||||| ||  ||||||||||| |  || ||||||| |||||| |||| ||||||    
T  19238614 tgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaatttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 49938829 - 49938797
Alignment:
Q  76 gtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||||||| ||||||||||    
T  49938829 gtgccaatttaggtgggttaatttagcttcttc 49938797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 51954153 - 51954229
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||| ||||||||||| ||| ||| |||| ||||  ||| |||||| |||||| |||| ||||||||||    
T  51954153 tgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

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Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 8177225 - 8177143
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  8177225 gggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 3799951 - 3800020
Alignment:
Q  38 tgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 24047139 - 24047063
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||| || |||| || |||||||    
T  24047139 tgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaatttaacttcttc 24047063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12587303 - 12587384
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||| ||||||||| ||||||||||| ||| |||||||||||||  ||| ||||||||||||| |||| ||||||||||    
T  12587303 gggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttc 12587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 27476806 - 27476733
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| ||||||||| | ||||||| |||||||||| ||||| ||||||||||| |||| |||||||||    
T  27476806 ggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 50901615 - 50901695
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| |||| |||||||| ||||||||||| |||| ||||||||||||  ||||||||||||||||| |||| |||||||||    
T  50901615 gggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgggctaatttagcttctt 50901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 2799897 - 2799977
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  2799897 gatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 21547517 - 21547457
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  21547517 tgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtggg 21547457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 17745288 - 17745218
Alignment:
Q  37 gtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||| |||||||||| ||||||| ||||||||||    
T  17745288 gtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggt-ggttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 33700813 - 33700747
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggtta 95  Q
    ||||||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||| | ||||||    
T  33700813 atctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtta 33700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 44126428 - 44126510
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| |||| |||||| |||  || |||||||||| |||||||||||||| || |||| ||||||||||    
T  44126428 gggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggctaatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 1094567 - 1094640
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||| |||| |||||| |||| ||||||||||||  ||||||||||||||||| |||| || |||||||    
T  1094567 gagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttcttc 1094640  T

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Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 39979126 - 39979199
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||| ||||||||||| |||  ||||||| |||| ||||||||||| |||| |||||| ||||||||||    
T  39979126 gagtgtgctcctcctcgaggtatcatattcgattatctcatgtgccaatttgggtgtgttaatttagcttcttc 39979199  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 6122833 - 6122909
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| ||| ||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  6122833 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 6122909  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 18037650 - 18037574
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||  ||||| | |||||||||||||||||  ||||| ||||||||||| |||| ||||||||||    
T  18037650 tgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 18037574  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 51814529 - 51814605
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||| ||||||||| |||||| |||| ||| |||||||||||||  |||||||||| |||||| |||| ||||||    
T  51814529 gatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 8904447 - 8904506
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||| || ||||||||| |||||| |||| |||||||||||||||||| ||||||||||    
T  8904447 gggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 6650628 - 6650710
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| |||||| |||| |||||| | || ||| |||||||||||||| ||| |||||||||||| ||| | ||||||||||    
T  6650628 gggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtggattagtttagcttcttc 6650710  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 10526856 - 10526938
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| |||||||| |||| |||||| |||| |||  ||||||||||||| | | |||||| ||||||||||| ||||||||||    
T  10526856 gggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttc 10526938  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 17439951 - 17440013
Alignment:
Q  27 ggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggt 89  Q
    ||||||||||||||||| ||||||||||| ||| ||| |||||||||  ||| ||||||||||    
T  17439951 ggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaatttaggt 17440013  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 40810500 - 40810582
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||| | ||| || |||| ||| |||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  40810500 gggatctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 40814443 - 40814373
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||| ||||||| ||||| |||| ||||||    
T  40814443 ggagtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagctt 40814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 17410264 - 17410325
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttag 87  Q
    |||||||||||||||| | ||||||||| | |||||||||||||||  || |||||||||||    
T  17410264 gggatctgggagtgtggtcctcctcgagatctcaagttcgattctcctttatgccaatttag 17410325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 25494112 - 25494031
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||| ||||| |||||||||||||||| || |||||| ||||| || ||| |||||||| |||| |||| || ||||||    
T  25494112 gggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttagatgggctaatttaacttctt 25494031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 40257437 - 40257514
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||| ||||||||||| |||||||| ||||| ||  ||| |||||| |||||| || | ||||||||||    
T  40257437 ctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagcttcttc 40257514  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 31794301 - 31794225
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| |||||| |||| |  |||||||||| |||| ||| |||||| |||||| |||| ||||||||||    
T  31794301 tgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggctaatttagcttcttc 31794225  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 44961807 - 44961879
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| ||||||  ||| ||| |||||||||||||| ||| |||||| |||||| |||| |||||||||    
T  44961807 gagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 15786363 - 15786304
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||||||||| |||||| |||| ||| |||||||||||| | ||| ||||||    
T  15786363 gggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 22049871 - 22049812
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||| |||||||||||||||| |||||| |  ||||||||||||| ||| ||||||    
T  22049871 gggatctgagagtgtgcttctcctcaaggtttgagattcgattctctctggtgtcaattt 22049812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 29753701 - 29753764
Alignment:
Q  45 ctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| |||| ||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  29753701 ctcctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc 29753764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 52116818 - 52116743
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||| |||||| | || ||| |||| |||||| || ||||||||| ||||||| |||| |||||||||    
T  52116818 tgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 6948117 - 6948039
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||||| ||||||||||| ||| |||| |||||| |  ||| |||||||| || |||||| || ||||||    
T  6948117 atctgggagtgtgctgctcctcgaggtctcatgttcaattctcaccggtgtcaatttagatgagttaatttaacttctt 6948039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 23398981 - 23399055
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||| |||| ||| |||| ||||||||||||||  ||| || ||||||| ||||||| || ||||||||||    
T  23398981 ggagtgtgtttcttctcaaggtctcaagttcgattcttccttatgtcaatttaagtgggttcatttagcttcttc 23399055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 23566376 - 23566302
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttct 106  Q
    |||||||||||| |||||  |||||||| |||| ||||||||| ||| || ||||||||||  ||| ||||||||    
T  23566376 tgggagtgtgctcctcctaaaggtttcaggttctattctctctggtggcagtttaggtgggcaaatttagcttct 23566302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 36124866 - 36124948
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| ||||| ||||| ||||||| ||| ||  || | ||||||||||||||| |||| ||||||||||    
T  36124866 gggacctgagagtgtgctcctccttgaggtctcaagtttgatccttcctagcgccaatttaggtgggctaatttagcttcttc 36124948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 2220015 - 2220052
Alignment:
Q  36 agtgtgcttctcctcgaggtttcaagttcgattctctc 73  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  2220015 agtgtgcttctcctcgaggtctcaggttcgattctctc 2220052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 3265963 - 3266016
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||| |||||| |||| ||| |||||||||||||| || |||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaattt 3266016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 7219952 - 7219879
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||| |||||||| || ||| |||||||||||| |  | |||||||||||||  |||| ||||||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaatttaggtggactaatttagcttcttc 7219879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 12259293 - 12259338
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctc 71  Q
    ||||| |||||||||||| |||||||| || |||||||||||||||    
T  12259293 gggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 14787370 - 14787297
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||||||| |||| ||| ||||||||||||||  |  ||||||| |||||||| | ||||||||||    
T  14787370 gagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagcttcttc 14787297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 25297806 - 25297887
Alignment:
Q  27 ggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| ||||||||| ||||||||||| | | ||| ||||||| |  | | ||||||||||||| |||| ||||||||||    
T  25297806 ggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtgggataatttagcttcttc 25297887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 42949327 - 42949254
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| ||||||||||| |||  || |||||||||  ||| ||||||| ||||| |||| |||||||||    
T  42949327 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 42949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 51703815 - 51703860
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    ||||||||||||||| |||||| | |||||| ||||||||||||||    
T  51703815 atctgggagtgtgctcctcctcaaagtttcaggttcgattctctct 51703860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 16893433 - 16893509
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||| || ||||||||||| ||| |||||||| ||||  ||| ||||||  ||||| |||| ||||||||||    
T  16893433 tgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 31605881 - 31605825
Alignment:
Q  36 agtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||||||| |||||| |||| ||||||||||||||| |  |||||||||| ||||||    
T  31605881 agtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtggg 31605825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 36371508 - 36371584
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||| |||||| |||| | | ||||||||||||||  |||||||||  | |||||| | |||||||||    
T  36371508 ctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggttagtttagcttctt 36371584  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 106073 - 106159
Alignment:
Q  18 attagctagggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    ||||||| |||| | ||||||||||| || ||||| || | ||||||||||||||||| || |||||| ||||||||||| ||||||    
T  106073 attagcttgggaccagggagtgtgctgcttctcgaagtctaaagttcgattctctcttatgtcaatttgggtgggttaatttagctt 106159  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 1435105 - 1435178
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||||||| |||| ||| |||||||||||||| ||| |||||| |||||| |||| ||||||||||    
T  1435105 ggagtgtgcttctcctcaaggtctca-gttcgattctctctggtgtcaatttgggtgggctaatttagcttcttc 1435178  T

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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 25637184 - 25637266
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| || |||||||| ||| ||||| |||||||   |||||||||||||||| |||| || |||||||    
T  25637184 gggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttc 25637266  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 23052560 - 23052484
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||||||||||||| |||| ||| ||||||||||| || |||||| ||| |||||| |||| ||| ||||||    
T  23052560 tgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatttagtttcttc 23052484  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 19016070 - 19016145
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |  ||||||||||| || || |||| |||||||||    
T  19016070 tgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagcttctt 19016145  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 446
Target Start/End: Original strand, 26910696 - 26910739
Alignment:
Q  403 tggttctaaatattggcaacttgtttgagtaacataaacattga 446  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  26910696 tggttctaaatattggaaacttgtttgagtaacataaagattga 26910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 33582006 - 33582088
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| ||||| ||||| ||| ||||||||||||||  || ||||||||||||  |||| ||||||||||    
T  33582006 gggacctgagagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttc 33582088  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 39715025 - 39715103
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||| ||||||||||||| ||||||||||| ||| ||||||||||| |  |  |||||||||||||| |||| ||||||    
T  39715025 gggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggctaatttagctt 39715103  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 11062399 - 11062452
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    ||||||||||||||||||| |||| ||| ||| |||||||||||||| ||||||    
T  11062399 tgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaattt 11062452  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 14500312 - 14500369
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaattt 85  Q
    |||||||||||||||| |||||| |||| |||  ||||||||||||| ||||||||||    
T  14500312 gatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaattt 14500369  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 42327438 - 42327357
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| ||||||||||||| |||||| |||| ||| ||||||||||||   |||||||||| |||||| |||| |||| ||||    
T  42327438 gggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagcatctt 42327357  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 3677387 - 3677315
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| |||||||||||||||| | |||||||||||||||  ||  ||||||| ||| |||||| |||||||||    
T  3677387 gagtatgcttctcctcgaggtcttaagttcgattctctccggtatcaatttaagtgagttaatttagcttctt 3677315  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 21304031 - 21303955
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||| |||| |||||  |||||||| |||||||||||||| ||| ||||||  | |||||||| ||||||||||    
T  21304031 tgggagtatgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 21195713 - 21195638
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||||| |||||| |||| ||| ||||||||| |||| ||| |||||| | |||| |||| |||||||||    
T  21195713 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 16918621 - 16918539
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||||| |||||| |||| | | ||| |||||||||| |||||| ||| | ||| ||| | ||||||||||    
T  16918621 gggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatggtttagtttagcttcttc 16918539  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 21213802 - 21213868
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtggg 92  Q
    |||| ||||||||||| | ||||| ||||| ||| ||||||||||| |  |||||||||||||||||    
T  21213802 gggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtggg 21213868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 37480108 - 37480190
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||| ||||||||| |||||| |||| ||| ||||||||||| |  || ||||||| |||||| |||| ||||||||||    
T  37480108 gggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 41908673 - 41908599
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||| |||||| |||| |||||||||||| || |  |||||||||| |||||| || | ||||||||||    
T  41908673 ggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttc 41908599  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 42602587 - 42602669
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||| ||||||||||||| || ||| |||| | | ||| |||||||||  |||||||||| |||||| |||| ||||||||||    
T  42602587 gggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 42860386 - 42860424
Alignment:
Q  31 ctgggagtgtgcttctcctcgaggtttcaagttcgattc 69  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  42860386 ctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 4060248 - 4060175
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||||||| || | ||| |||||||||||||| ||| ||||||  | |||||| | ||||||||||    
T  4060248 gagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaatttgagggggttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 7600015 - 7599978
Alignment:
Q  35 gagtgtgcttctcctcgaggtttcaagttcgattctct 72  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  7600015 gagtgtgctcctcctcgaggtttcatgttcgattctct 7599978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 12086172 - 12086091
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||| |||| |||||||| |||||| |||| ||  ||||||||| |||  |||| |||||||||||| |||| |||||||||    
T  12086172 gggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 37971963 - 37972008
Alignment:
Q  61 gttcgattctctcttgtgccaatttaggtgggttaatatagcttct 106  Q
    |||||||||||||  ||||||||||||||||| |||| ||||||||    
T  37971963 gttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 2750659 - 2750587
Alignment:
Q  36 agtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    ||||||||  ||||| |||| ||| |||||||||||||| ||||||||||  | |||||| | ||||||||||    
T  2750659 agtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 7799072 - 7798997
Alignment:
Q  32 tgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||||||||| ||||||||| | |||  ||||||||||||  ||||||||||| || || |||| ||||||||||    
T  7799072 tgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-ggctaatttagcttcttc 7798997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 19244142 - 19244222
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttct 106  Q
    |||| ||| ||||||||| |||| | |||| ||| |||||||||||||| ||||||||||  ||||| |||| ||| ||||    
T  19244142 gggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggctaatttagtttct 19244222  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 11561 - 11609
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  11561 gggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctct 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 12754 - 12816
Alignment:
Q  45 ctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||| | |||||||||||||||||  || || |||||||||||||||| |||||||||    
T  12754 ctcctcgagatctcaagttcgattctctccggtaccgatttaggtgggttaatttagcttctt 12816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 45794 - 45733
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggtta 95  Q
    |||||||| | ||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||    
T  45794 ggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttaggtgggtta 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 49339 - 49420
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||| || ||||||||| ||| ||||||| ||| |||||||||||||  ||| ||||||| |||||||||| || ||||||    
T  49339 gggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatttaacttctt 49420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 10252 - 10330
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagctt 104  Q
    |||||||||||||| || ||||||||| || | ||||| |||||||||   |||||||||| ||||| |||| ||||||    
T  10252 gggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctcaaatgccaatttaagtgggctaatttagctt 10330  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 112318 - 112396
Alignment:
Q  29 atctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    ||||||||||||| | ||| | ||||| | | |||||||||||||  ||||||||||||||||  |||| |||||||||    
T  112318 atctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtggactaatttagcttctt 112396  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 15000 - 14927
Alignment:
Q  34 ggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttctt 107  Q
    |||||||||| ||||||||||| |||  || |||||||||  ||| ||||||| ||||| |||| |||||||||    
T  15000 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 14927  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 13087 - 13042
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctc 73  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||    
T  13087 gatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 883 - 835
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattctctct 74  Q
    ||||||||||| |||||| |||||||| || ||| ||||||||||||||    
T  883 gggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2512 - 2468
Alignment:
Q  27 ggatctgggagtgtgcttctcctcgaggtttcaagttcgattctc 71  Q
    ||||||||||||||||| |||||| |||| ||| |||||||||||    
T  2512 ggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 41674 - 41594
Alignment:
Q  28 gatctgggagtgtgcttctcctcgaggtttcaagttcgattctctcttgtgccaatttaggtgggttaatatagcttcttc 108  Q
    |||||| |||| |||| ||||||||||| ||| |||| |||||||||  || |||||| |||||| |||| |||| |||||    
T  41674 gatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggctaatttagcctcttc 41594  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19890 - 19846
Alignment:
Q  26 gggatctgggagtgtgcttctcctcgaggtttcaagttcgattct 70  Q
    ||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  19890 gggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

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