View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6903_low_2 (Length: 617)

Name: NF6903_low_2
Description: NF6903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6903_low_2
NF6903_low_2
[»] chr1 (29 HSPs)
chr1 (18-391)||(4882568-4882934)
chr1 (454-543)||(424345-424434)
chr1 (454-543)||(7995614-7995703)
chr1 (454-543)||(12871599-12871688)
chr1 (456-543)||(32784088-32784175)
chr1 (454-539)||(33487088-33487173)
chr1 (470-543)||(4882413-4882486)
chr1 (454-543)||(27534677-27534766)
chr1 (454-543)||(28678184-28678273)
chr1 (454-543)||(42490871-42490960)
chr1 (458-543)||(3232770-3232855)
chr1 (458-543)||(20411555-20411640)
chr1 (458-543)||(14265266-14265351)
chr1 (454-543)||(18343592-18343681)
chr1 (458-539)||(29205267-29205348)
chr1 (458-543)||(13488590-13488675)
chr1 (454-543)||(45750456-45750545)
chr1 (471-543)||(37822399-37822471)
chr1 (454-543)||(45193680-45193769)
chr1 (454-517)||(33939082-33939145)
chr1 (458-543)||(4871080-4871165)
chr1 (486-543)||(44517157-44517214)
chr1 (484-543)||(10627008-10627067)
chr1 (461-542)||(17347584-17347664)
chr1 (454-543)||(42276335-42276423)
chr1 (458-543)||(32878690-32878773)
chr1 (502-543)||(51418040-51418080)
chr1 (455-531)||(15791554-15791630)
chr1 (503-543)||(29726650-29726690)
[»] scaffold0312 (1 HSPs)
scaffold0312 (454-543)||(6115-6204)
[»] chr5 (27 HSPs)
chr5 (454-543)||(17331306-17331395)
chr5 (460-542)||(17699537-17699619)
chr5 (454-543)||(32347768-32347858)
chr5 (454-543)||(28040607-28040696)
chr5 (456-543)||(29097769-29097856)
chr5 (454-543)||(6281022-6281111)
chr5 (458-543)||(27241046-27241131)
chr5 (454-543)||(33164522-33164611)
chr5 (454-543)||(43493850-43493939)
chr5 (454-543)||(17096293-17096385)
chr5 (459-543)||(178160-178244)
chr5 (459-543)||(42609127-42609211)
chr5 (454-537)||(26295118-26295201)
chr5 (454-543)||(6635227-6635317)
chr5 (461-543)||(34431045-34431127)
chr5 (458-543)||(981079-981164)
chr5 (454-515)||(7771888-7771949)
chr5 (455-543)||(20483165-20483253)
chr5 (454-543)||(23882170-23882259)
chr5 (458-543)||(39531457-39531540)
chr5 (459-539)||(12439692-12439771)
chr5 (454-543)||(3740336-3740424)
chr5 (458-543)||(6681928-6682013)
chr5 (486-543)||(39179882-39179939)
chr5 (489-543)||(3079359-3079413)
chr5 (485-543)||(17687214-17687272)
chr5 (506-543)||(12891706-12891743)
[»] chr8 (30 HSPs)
chr8 (456-543)||(41361712-41361799)
chr8 (454-543)||(37612631-37612720)
chr8 (454-542)||(1810283-1810370)
chr8 (458-543)||(10338884-10338969)
chr8 (454-542)||(2025272-2025360)
chr8 (454-543)||(10147924-10148014)
chr8 (454-543)||(24791230-24791319)
chr8 (454-543)||(30026942-30027031)
chr8 (454-543)||(39067751-39067840)
chr8 (454-542)||(11161860-11161948)
chr8 (454-543)||(14600760-14600849)
chr8 (458-543)||(31202440-31202525)
chr8 (454-543)||(31407810-31407899)
chr8 (458-543)||(2234532-2234617)
chr8 (459-543)||(9501572-9501657)
chr8 (454-543)||(13570788-13570877)
chr8 (461-543)||(1039955-1040037)
chr8 (458-543)||(12329608-12329693)
chr8 (454-543)||(23971156-23971245)
chr8 (454-543)||(31308120-31308215)
chr8 (458-543)||(24699812-24699899)
chr8 (460-538)||(30039399-30039476)
chr8 (502-543)||(37128548-37128589)
chr8 (454-510)||(7583859-7583915)
chr8 (477-540)||(15288863-15288926)
chr8 (477-540)||(15469232-15469295)
chr8 (461-543)||(3204818-3204899)
chr8 (461-539)||(10334159-10334237)
chr8 (454-524)||(13576257-13576326)
chr8 (483-539)||(28297174-28297230)
[»] chr7 (37 HSPs)
chr7 (454-543)||(42603823-42603912)
chr7 (456-543)||(5684345-5684432)
chr7 (456-543)||(5709395-5709482)
chr7 (458-543)||(28664966-28665051)
chr7 (456-543)||(9785297-9785384)
chr7 (454-543)||(11832996-11833086)
chr7 (457-543)||(17473777-17473863)
chr7 (457-543)||(17579351-17579437)
chr7 (454-543)||(45457610-45457699)
chr7 (456-543)||(22747562-22747648)
chr7 (454-543)||(21603441-21603529)
chr7 (454-543)||(36579366-36579455)
chr7 (454-543)||(45482042-45482131)
chr7 (454-543)||(46026083-46026172)
chr7 (454-539)||(48304453-48304538)
chr7 (454-543)||(21990639-21990729)
chr7 (458-543)||(1281191-1281276)
chr7 (454-543)||(27535434-27535523)
chr7 (458-543)||(39533029-39533114)
chr7 (454-543)||(6667373-6667463)
chr7 (458-543)||(10574363-10574448)
chr7 (454-543)||(17509258-17509346)
chr7 (454-543)||(17543868-17543956)
chr7 (454-543)||(42644654-42644743)
chr7 (454-543)||(3266360-3266455)
chr7 (458-543)||(32740734-32740820)
chr7 (454-543)||(41287935-41288025)
chr7 (470-539)||(2622586-2622655)
chr7 (458-538)||(21954878-21954957)
chr7 (463-543)||(24320277-24320357)
chr7 (458-538)||(39707272-39707351)
chr7 (489-543)||(43847083-43847137)
chr7 (502-543)||(10094467-10094508)
chr7 (502-543)||(15674666-15674707)
chr7 (458-510)||(36719628-36719680)
chr7 (454-498)||(40761567-40761611)
chr7 (503-543)||(14657877-14657917)
[»] chr4 (43 HSPs)
chr4 (454-543)||(43244435-43244524)
chr4 (455-542)||(394329-394416)
chr4 (456-543)||(31521962-31522049)
chr4 (454-543)||(7060302-7060391)
chr4 (454-543)||(22757072-22757161)
chr4 (454-543)||(29268831-29268920)
chr4 (454-543)||(44757096-44757185)
chr4 (456-543)||(51152105-51152192)
chr4 (456-543)||(8712510-8712597)
chr4 (461-543)||(13965545-13965627)
chr4 (454-543)||(6911658-6911747)
chr4 (454-543)||(24825627-24825716)
chr4 (454-543)||(30202016-30202105)
chr4 (454-543)||(478066-478154)
chr4 (454-543)||(24568767-24568856)
chr4 (454-543)||(24611853-24611942)
chr4 (458-543)||(26742517-26742602)
chr4 (454-543)||(39837572-39837662)
chr4 (454-543)||(24100117-24100206)
chr4 (454-543)||(25658145-25658234)
chr4 (458-543)||(26674354-26674439)
chr4 (454-543)||(29922812-29922904)
chr4 (469-543)||(38944201-38944275)
chr4 (454-543)||(11210367-11210456)
chr4 (456-537)||(27394810-27394891)
chr4 (459-543)||(5814330-5814414)
chr4 (463-543)||(7083870-7083950)
chr4 (478-543)||(6881958-6882023)
chr4 (454-543)||(7084184-7084273)
chr4 (458-543)||(7861259-7861344)
chr4 (462-539)||(20399961-20400038)
chr4 (458-538)||(22049464-22049543)
chr4 (456-543)||(19745369-19745456)
chr4 (456-543)||(19794350-19794437)
chr4 (490-543)||(43493341-43493394)
chr4 (463-542)||(20887810-20887889)
chr4 (454-536)||(626609-626690)
chr4 (485-543)||(2447809-2447867)
chr4 (464-543)||(45351124-45351205)
chr4 (464-543)||(45360603-45360684)
chr4 (502-542)||(39523435-39523475)
chr4 (459-538)||(12717177-12717255)
chr4 (484-543)||(50801225-50801284)
[»] chr3 (34 HSPs)
chr3 (454-543)||(11819061-11819150)
chr3 (454-543)||(36691861-36691950)
chr3 (454-543)||(48652502-48652591)
chr3 (454-543)||(3456921-3457010)
chr3 (454-543)||(14585440-14585529)
chr3 (454-543)||(30156344-30156432)
chr3 (458-543)||(31270308-31270393)
chr3 (454-543)||(31462808-31462897)
chr3 (458-543)||(32080816-32080901)
chr3 (454-536)||(1074962-1075044)
chr3 (454-543)||(4206573-4206662)
chr3 (454-543)||(13702034-13702123)
chr3 (454-543)||(34960920-34961009)
chr3 (454-543)||(53155492-53155581)
chr3 (456-543)||(54239080-54239167)
chr3 (454-543)||(49628149-49628239)
chr3 (454-543)||(55090645-55090734)
chr3 (454-543)||(39610182-39610279)
chr3 (456-543)||(35174684-35174771)
chr3 (454-543)||(27189456-27189545)
chr3 (454-543)||(36624756-36624845)
chr3 (454-543)||(48400877-48400966)
chr3 (460-537)||(53402614-53402691)
chr3 (470-543)||(24483740-24483813)
chr3 (454-543)||(38527241-38527330)
chr3 (459-543)||(40013334-40013421)
chr3 (476-543)||(22484965-22485032)
chr3 (458-543)||(19645203-19645288)
chr3 (505-543)||(41868356-41868394)
chr3 (486-543)||(4817892-4817949)
chr3 (343-383)||(4512853-4512893)
chr3 (459-509)||(48854889-48854939)
chr3 (506-538)||(2147756-2147788)
chr3 (454-497)||(49628194-49628238)
[»] chr2 (40 HSPs)
chr2 (454-543)||(9690027-9690116)
chr2 (454-543)||(17268178-17268267)
chr2 (458-543)||(44942267-44942352)
chr2 (454-541)||(43474184-43474271)
chr2 (454-543)||(11937912-11938002)
chr2 (454-543)||(12704665-12704754)
chr2 (454-543)||(15919852-15919941)
chr2 (454-543)||(22597113-22597202)
chr2 (454-543)||(25067830-25067919)
chr2 (458-543)||(27095687-27095772)
chr2 (454-543)||(5754266-5754355)
chr2 (454-543)||(20561186-20561275)
chr2 (454-543)||(9978723-9978812)
chr2 (454-543)||(18089446-18089535)
chr2 (458-543)||(33012059-33012144)
chr2 (455-539)||(13740718-13740801)
chr2 (454-542)||(38384497-38384585)
chr2 (454-543)||(34416815-34416904)
chr2 (454-543)||(36867986-36868075)
chr2 (454-543)||(38535359-38535448)
chr2 (461-543)||(35333490-35333572)
chr2 (458-543)||(4604361-4604446)
chr2 (455-543)||(4739310-4739396)
chr2 (454-543)||(32015198-32015291)
chr2 (454-542)||(34963121-34963208)
chr2 (454-541)||(7073004-7073091)
chr2 (454-543)||(31908870-31908959)
chr2 (454-543)||(13879060-13879157)
chr2 (454-543)||(14019185-14019282)
chr2 (464-543)||(4732059-4732138)
chr2 (464-543)||(34470952-34471033)
chr2 (454-498)||(12891188-12891232)
chr2 (500-543)||(4426712-4426755)
chr2 (469-543)||(10287060-10287133)
chr2 (460-538)||(11798576-11798653)
chr2 (458-524)||(28261966-28262032)
chr2 (458-538)||(17767611-17767690)
chr2 (353-391)||(8799510-8799548)
chr2 (454-543)||(28231151-28231240)
chr2 (502-543)||(32314468-32314509)
[»] scaffold1379 (2 HSPs)
scaffold1379 (454-543)||(1140-1229)
scaffold1379 (502-543)||(1-42)
[»] chr6 (15 HSPs)
chr6 (454-543)||(6419912-6420001)
chr6 (454-543)||(12481424-12481513)
chr6 (454-543)||(15590133-15590222)
chr6 (454-543)||(21507862-21507951)
chr6 (454-543)||(14783225-14783314)
chr6 (458-543)||(31937473-31937557)
chr6 (454-543)||(8693711-8693803)
chr6 (454-543)||(23654228-23654317)
chr6 (460-529)||(29927447-29927516)
chr6 (455-543)||(35219958-35220045)
chr6 (456-543)||(4921935-4922023)
chr6 (454-543)||(2304864-2304953)
chr6 (455-543)||(19402862-19402950)
chr6 (454-518)||(4084996-4085060)
chr6 (483-543)||(4393777-4393837)
[»] scaffold0155 (1 HSPs)
scaffold0155 (459-543)||(35065-35149)
[»] scaffold0536 (1 HSPs)
scaffold0536 (454-543)||(2878-2969)
[»] scaffold0321 (1 HSPs)
scaffold0321 (469-543)||(7178-7252)
[»] scaffold0056 (1 HSPs)
scaffold0056 (454-543)||(74142-74231)
[»] scaffold0001 (1 HSPs)
scaffold0001 (454-543)||(404312-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (456-543)||(2471-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (454-542)||(13300-13392)
[»] scaffold1350 (1 HSPs)
scaffold1350 (454-543)||(1553-1641)


Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 18 - 391
Target Start/End: Complemental strand, 4882934 - 4882568
Alignment:
Q  18 aaaatgtgtttatatttagtattcaacaatgtctcaaatattattaattactatgtgaagagattactaaagaaaattattttcttgtttccagtgaagt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4882934 aaaatgtgtttatatttagtattcaacaatgtctcaaatatt------tactatgtgaagagattactaaagaaagttattttcttgtttctagtgaagt 4882841  T
Q  118 aagtaatcaggaggaaatgaacatcaataggtgtagtaaaacaggttcaatctgtcagaccagtttgtttagtctgctatttttgaccagatgaacttcc 217  Q
    |||||  |||||||||||| ||||||||||||||||||||| |||||||||||||| || | |||||||||| | | |||||||||||||||||||||||    
T  4882840 aagtatccaggaggaaatggacatcaataggtgtagtaaaataggttcaatctgtcggatcggtttgtttagcccgttatttttgaccagatgaacttcc 4882741  T
Q  218 attttgaacttgtcgcttttagttgactcgtcccattaaacttgttgaaaaaatggggtggggcagagacagggccgacctgcatgccaactcgtcaacc 317  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882740 attttgaacttgccgcttttagttgactcgtcccgttaaacttgttgaaaaaatggggtggggcagagacagggccgacctgcatgccaactcgtcaacc 4882641  T
Q  318 tgcaatttatttaannnnnnnnactaatgggtcaaacataatttaaagtgaagcgaccaaataactcattataa 391  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882640 tgcaatttatttaa-tttttttactaatgggtcaaacataatttaaagtgaagcgaccaaataactcattataa 4882568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 424434 - 424345
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 7995703 - 7995614
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 12871599 - 12871688
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacata 12871688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 32784088 - 32784175
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacata 32784175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 539
Target Start/End: Complemental strand, 33487173 - 33487088
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatttca 33487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 470 - 543
Target Start/End: Complemental strand, 4882486 - 4882413
Alignment:
Q  470 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  4882486 gtcaatttcgacccaaaaatcacccctccgatttgtttttcattatatcctaattgaataagtgatttcacata 4882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 27534677 - 27534766
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| |||||||||||||||| |||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 28678273 - 28678184
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  28678273 agaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatttcacata 28678184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 42490871 - 42490960
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  42490871 agagaggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatttcacata 42490960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 3232770 - 3232855
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||| | ||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatttcacata 3232855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 20411555 - 20411640
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | ||||||||| || ||| | |||||||||||||||||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttcacata 20411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 14265266 - 14265351
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||  ||||||||||||||| |  |||||||| ||||||||||||| ||||||||||||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 14265351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 18343592 - 18343681
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| ||||||||||||||||||||| | ||||||||||| ||||| | ||||| ||| ||||||||||||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcaccccttcgatttgtttttccttctaccttaattaaatgagtgatttcacata 18343681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 29205267 - 29205348
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    |||||||||| |||||| |||||||||||||||||||||   | ||||||||| ||||||| ||||||||||||||||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttca 29205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 13488675 - 13488590
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||| | ||||||||||||||||||| ||| ||||||||||| ||| | | |||||||||||||||||| |||||    
T  13488675 gggtgatttagggtcgattttgacccaaaaatcacccatccgatttgtttttccttccaccttaattgaataagtgattttacata 13488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 45750456 - 45750545
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||| |  ||| |||  |||||| || |||||||||||||||||| ||||||||||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatttcacata 45750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 543
Target Start/End: Complemental strand, 37822471 - 37822399
Alignment:
Q  471 tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||||||||||| |||| ||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  37822471 tcaattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttcacata 37822399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 45193769 - 45193680
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| |||||| |||||| ||| |||||| ||| |||||||| | |||||||| | ||||||||||||||||||||||||||||||||    
T  45193769 agaggggcgatttagggtcaattttaacccaataat-acccctccgagttgttttttccttctatcctaattgaataagtgatttcacata 45193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 517
Target Start/End: Complemental strand, 33939145 - 33939082
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctat 517  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||| ||||||    
T  33939145 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttctttctat 33939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 4871165 - 4871080
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| | |||| |||||| || |||||||| |||| | ||||||||| || ||| |||||||||||||| ||||||||||    
T  4871165 gggtgatttaagatcaattttgactcataaatcaccactccgaattgtttttccttttattctaattgaataagttatttcacata 4871080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 543
Target Start/End: Original strand, 44517157 - 44517214
Alignment:
Q  486 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  44517157 aaatcacccttccgaattgtttttccttctatcctaattcaataagtgatttcacata 44517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 10627008 - 10627067
Alignment:
Q  484 aaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||| |||||| | ||||||||| || |||||||||||||||||| ||||||||||    
T  10627008 aaaaatcatccctccgagttgtttttctttatatcctaattgaataagtaatttcacata 10627067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 542
Target Start/End: Original strand, 17347584 - 17347664
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    ||||||| |||||| ||||||| ||||||||||| ||| | ||||||||  ||||||| |||  ||||||||||||||||||    
T  17347584 tgatttagggtcaattttgacc-aaaaatcacccatccgagttgttttttcttctatcataaaggaataagtgatttcacat 17347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 42276335 - 42276423
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| ||| |  |||||| ||||| |||||||||| | ||||||||  ||||||| ||||| ||||| ||||||||||||    
T  42276335 agaggggtgatttagggttatttttgacacaaaa-tcacccctccgaattgttttttcttctatcataattaaataactgatttcacata 42276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 32878690 - 32878773
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| ||| || |||||||||||| ||| || ||| | |||||||||  |||||||||||| |||||||| |||||||||    
T  32878690 gggtgatttagggttaattttgacccaaaa-tcatccttccgagttgtttttccctctatcctaattaaataagtg-tttcacata 32878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 51418040 - 51418080
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacata 51418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 531
Target Start/End: Complemental strand, 15791630 - 15791554
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataag 531  Q
    ||||| ||||||| | |||| |||||| |||||||||| | ||| | ||||||||| || |||| ||||||||||||    
T  15791630 gagggctgatttaggatcaattttgacacaaaaatcactcatccgagttgtttttccttatatcttaattgaataag 15791554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 543
Target Start/End: Complemental strand, 29726690 - 29726650
Alignment:
Q  503 tgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||| || ||||||||| |||||||||||||||||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacata 29726650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 6115 - 6204
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 17331306 - 17331395
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttcacata 17331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 17699537 - 17699619
Alignment:
Q  460 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacat 17699619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 32347858 - 32347768
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttg-tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgttttttccttctatcctaattgaataagtgatttcacata 32347768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 28040607 - 28040696
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | | ||||||| || |||||||||||||||||||||||||||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttcacata 28040696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 29097769 - 29097856
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 29097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 6281022 - 6281111
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  | || |||||| |||||| ||||||||||||||||||| |||||    
T  6281022 agaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgattttacata 6281111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 27241046 - 27241131
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||| ||||||||||||||||||||||  | ||||||||| || |||||||||||||||||||||||||||||    
T  27241046 gggtgatttatgatcaattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttcacata 27241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 33164611 - 33164522
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||| | ||||||||| ||||| | ||||||||||||||||||||||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatttcacata 33164522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 43493850 - 43493939
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  43493850 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttccttctattctaattgaataagtgatttcacata 43493939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 17096385 - 17096293
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttg---tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | |||   |||||| ||||||||||||||||||||||||||||||||    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccctcccagttgttttttttccttctatcctaattgaataagtgatttcacata 17096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 178244 - 178160
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||| |||||| ||||||||||| |||| | |||| |||| || |||||||||||||||||||||||||||||    
T  178244 ggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttccttatatcctaattgaataagtgatttcacata 178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 42609127 - 42609211
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||| ||||||| ||||||||| | ||| | ||||||||  ||||||||||||||||||||||||||||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttcttctatcctaattgaataagtgatttcacata 42609211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 454 - 537
Target Start/End: Complemental strand, 26295201 - 26295118
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt 537  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||||| |  |||||||| ||||||||| ||||||||||||||||    
T  26295201 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttccttctatccttattgaataagtgattt 26295118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 6635227 - 6635317
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcaccc-ctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| || ||| ||||||||||||||||||| |||  | ||||||||| ||||||| ||||||||||||||||||||||||    
T  6635227 agagggatgatttagggccaattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacata 6635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 34431045 - 34431127
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| |||||| ||||||||||||||||||| | | | ||||||||  ||||||  ||||||||||||||||||||||||    
T  34431045 tgatttagggtcaattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttcacata 34431127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 981164 - 981079
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| | |||| |||||||||| |||| ||||||| | ||||||||| ||||||| ||||||||  ||||||||||||||    
T  981164 gggtgatttaggatcaattttgacccaataatcgcccctccgagttgtttttccttctatcataattgaacgagtgatttcacata 981079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 515
Target Start/End: Complemental strand, 7771949 - 7771888
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattct 515  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||    
T  7771949 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttct 7771888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 543
Target Start/End: Original strand, 20483165 - 20483253
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaa-ttgaataagtgatttcacata 543  Q
    ||||||||||||| | |||| |||||||||||||||| |||||| | ||||||||| || ||| |||| |||||||||||||||||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatca-ccctccaaattgtttttccttttattctaatttgaataagtgatttcacata 20483253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 23882259 - 23882170
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||  ||||||||| |  ||| | ||||||||| |||||||| ||||||||||||||||| |||||    
T  23882259 agaggggtgatttagggtcaattttgattcaaaaatcatcaatccaaattgtttttctttctatccaaattgaataagtgatttgacata 23882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 39531540 - 39531457
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||||||||| ||| |||||| | ||||||| | ||||||| ||||||||||||||||||||||||    
T  39531540 gggtgatttaaggtcaattttgacccaaaa-tcatccctccgagttgttttcc-ttctatcgtaattgaataagtgatttcacata 39531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 539
Target Start/End: Complemental strand, 12439771 - 12439692
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    ||||||||| ||  || ||||||| ||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||    
T  12439771 ggtgatttagggataattttgacctaaaaatcaccc-tccgaattgtttttcattctatcctagttgaataagtgatttca 12439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 3740336 - 3740424
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| |||||||| ||| || |||||| ||||||||| || ||  | ||||||| | ||||||||||||||||||||||||||||||||    
T  3740336 agaggtgtgatttagggttaattttgactcaaaaatcatccatctgaattgttttcc-ttctatcctaattgaataagtgatttcacata 3740424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 6682013 - 6681928
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||  |||||||||| |||||||||||| | | | | ||||||||| || ||||  |||||||||||||||||||||||    
T  6682013 gggtgatttagagtcaaatttggcccaaaaatcactcattcgagttgtttttccttttatctgaattgaataagtgatttcacata 6681928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 39179939 - 39179882
Alignment:
Q  486 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||| | || |||||| |||||| |||||||||||||||||||||||||    
T  39179939 aaatcacccctccgaattatttttccttctattctaattgaataagtgatttcacata 39179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 3079413 - 3079359
Alignment:
Q  489 tcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||||| |||||    
T  3079413 tcacccctccgatttgtttttccttatatcataattgaataagtgatttaacata 3079359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 543
Target Start/End: Original strand, 17687214 - 17687272
Alignment:
Q  485 aaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||  ||| | ||||||||| ||||||| ||||||||||||| ||||||||||    
T  17687214 aaaatcaccaatccgagttgtttttccttctatcttaattgaataagttatttcacata 17687272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 543
Target Start/End: Original strand, 12891706 - 12891743
Alignment:
Q  506 ttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| || |||||||||||||||||||||||||||||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacata 12891743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 5e-30; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 41361712 - 41361799
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacata 41361799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 37612631 - 37612720
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | || |||||| |||||||||| |||||||||||||||||||||    
T  37612631 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtgatttcacata 37612720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 1810370 - 1810283
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||    
T  1810370 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttttttttc-ttctatcctaattcaataagtgatttcacat 1810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 10338969 - 10338884
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||| |||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 10338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 2025360 - 2025272
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||| | ||||||||| || ||| ||||||||||||||||||||||||    
T  2025360 agaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttttattctaattgaataagtgatttcacat 2025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 10147924 - 10148014
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttg-tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | ||| |||||  ||||||||||||||||||||||||||||||||    
T  10147924 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgatttcacata 10148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 24791319 - 24791230
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| | ||||||||| || |||||||||| |||||||||||| |||||    
T  24791319 agaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgatttaacata 24791230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 30027031 - 30026942
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||| | ||||||||  ||||||| ||||||||||||||||||||||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttcacata 30026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 39067840 - 39067751
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||||   ||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatttcacata 39067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 454 - 542
Target Start/End: Original strand, 11161860 - 11161948
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||||||| ||||| |||||| ||||||||||||||||||||| | | ||||||||| || |||||||||||||||||| |||||||||    
T  11161860 agaggggtaatttagggtcaattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatttcacat 11161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 14600849 - 14600760
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||| |||||| |||||||||||||||| || ||| | ||||||||  ||||||||||||||||||| ||||||||||||    
T  14600849 agagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatttcacata 14600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 31202440 - 31202525
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||||||||||||| || ||| | ||||||||| ||||||  ||||||||||||||||||||||||    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttcacata 31202525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 31407899 - 31407810
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||| | |||| | ||||||||| ||||||| || |||||||| ||||||||||||    
T  31407899 agaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatttcacata 31407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 2234617 - 2234532
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| || ||| || ||||| ||||||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||||    
T  2234617 gggtgatctagggttaattttgatccaaaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttcacata 2234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 9501572 - 9501657
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||| ||||| ||||||||||||| ||  | |||||||| | ||||||||||||||||||||||||||||||||    
T  9501572 ggtgatttagggtcaattttgatccaaaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttcacata 9501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 13570877 - 13570788
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||  ||||| ||||| | ||||||||  | ||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  13570877 agaggggtgatttagagtcaattttgatctaaaaatcattcatcccaattgtttttcattctatcctaattaaataagtgatttcacata 13570788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 543
Target Start/End: Complemental strand, 1040037 - 1039955
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| |||||| ||||| ||||||||||||| ||| | ||| ||||| |||||| |||||| ||||||||||||||||||    
T  1040037 tgatttaaggtcaattttgatccaaaaatcacccatccgaattggttttccttctattctaattcaataagtgatttcacata 1039955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 12329608 - 12329693
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||  ||||| ||||| ||||||||||||  | | | ||||||||| || |||||||||||||||||||||||||||||    
T  12329608 gggtgatttagagtcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacata 12329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 23971245 - 23971156
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||||||  || || ||||||| ||||||||| | ||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  23971245 agagaggtgatttaaagtaaattttgaccaaaaaatcactcatccgagttgtttttccttctattctaattgaataagtgatttcacata 23971156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 31308120 - 31308215
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatt------tgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| | |||||||||| |||| | |      |||||||| ||||||||||||||||||||||||||||||||    
T  31308120 agaggggtgatttaaggtcaattttgatctaaaaatcacctctccgactccgagttgtttttccttctatcctaattgaataagtgatttcacata 31308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 24699812 - 24699899
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcc--tatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||||||||||||||| |||   || | |||||  || |||||||||| ||||||||||||||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcacccatccgagatgttttttttcttatatcctaattaaataagtgatttcacata 24699899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 538
Target Start/End: Complemental strand, 30039476 - 30039399
Alignment:
Q  460 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    ||||||||||||||| |||||||| |||||||| | ||| | ||||||||| |||| | ||||||||||| ||||||||    
T  30039476 gtgatttatggtcaattttgaccc-aaaatcactcatccgaattgtttttccttcttttctaattgaatatgtgatttc 30039399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 37128589 - 37128548
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  37128589 ttgtttttccttctatcctagttgaataagtgatttcacata 37128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 510
Target Start/End: Complemental strand, 7583915 - 7583859
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttc 510  Q
    |||||||||||||| | |||| ||||||||||||||||||| ||| | |||||||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatcacccatccgagttgtttttc 7583859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 15288926 - 15288863
Alignment:
Q  477 ttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcac 540  Q
    ||||| ||||||||| |||| | | ||||||||| ||||||||||||| |||| ||||||||||    
T  15288926 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 15469295 - 15469232
Alignment:
Q  477 ttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcac 540  Q
    ||||| ||||||||| |||| | | ||||||||| ||||||||||||| |||| ||||||||||    
T  15469295 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 543
Target Start/End: Complemental strand, 3204899 - 3204818
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||  ||||| |||||||||||||| |||| ||| | |||||||||  ||||| |||||| ||| ||||||||||||||    
T  3204899 tgatttagagtcaattttgacccaaaaattaccc-tccgaattgtttttccatctattctaatttaatgagtgatttcacata 3204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 539
Target Start/End: Original strand, 10334159 - 10334237
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    ||||||| |||||| ||||| ||||||||||| | |   | ||||||||| ||||||||||||| ||||||||| ||||    
T  10334159 tgatttagggtcaattttgatccaaaaatcactcatatgagttgtttttccttctatcctaattaaataagtgagttca 10334237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 524
Target Start/End: Complemental strand, 13576326 - 13576257
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaatt 524  Q
    |||||||||||||| | |||| ||||||| |||| ||| |||||| | ||||||||| |||||||||||||    
T  13576326 agaggggtgatttaggatcaattttgacctaaaa-tcatccctccgagttgtttttctttctatcctaatt 13576257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 28297230 - 28297174
Alignment:
Q  483 caaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    ||||||||||| |||| | ||||||||| |||| | |||||||||| ||||||||||    
T  28297230 caaaaatcaccgctccgagttgtttttccttcttttctaattgaattagtgatttca 28297174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 7e-29; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 42603912 - 42603823
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  42603912 agagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattgtttttcattctatcataattgaataagtgatttcacata 42603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 5684345 - 5684432
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| |||||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5684432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 5709395 - 5709482
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| |||||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5709482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 28665051 - 28664966
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 28664966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 9785297 - 9785384
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||||| ||||||||||||||||||||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacata 9785384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 11832996 - 11833086
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccc-tcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||| | ||||||||| |||| |||||||||||||||||||||||||||    
T  11832996 agagggatgatttatggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctttcctaattgaataagtgatttcacata 11833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 543
Target Start/End: Complemental strand, 17473863 - 17473777
Alignment:
Q  457 ggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 543
Target Start/End: Original strand, 17579351 - 17579437
Alignment:
Q  457 ggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 45457699 - 45457610
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  45457699 agaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttccttctatcttaattgaataagtgatttcacata 45457610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 456 - 543
Target Start/End: Complemental strand, 22747648 - 22747562
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||| |||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccctccaagttg-ttttccttctatcctaattgaataagtgatttgacata 22747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 21603441 - 21603529
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||| ||||| ||||||||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  21603441 agaggggtgatttagggtcaattttgacc-aaaaagcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 21603529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 36579455 - 36579366
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| |||||||| |||||||||||||| | ||||||||| |||||||||| |||||||||||||| ||||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgattccacata 36579366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 45482042 - 45482131
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| |||||||| |||||| |||||||| |||||||||||||| |  |||||||| ||||||||||||| ||||||||||||||||||    
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 45482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 46026172 - 46026083
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| ||||||||||||||||||||| |||| |||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatttaacata 46026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 539
Target Start/End: Complemental strand, 48304538 - 48304453
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||| ||||| | ||||||||||||||||||||||||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttca 48304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 21990639 - 21990729
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttg-tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||| | ||| |||||| | ||||||||||||||||||||||||||||||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacata 21990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 1281276 - 1281191
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||| | ||||||| ||||||||||| ||| | |||||||||||| ||| |||||||||||||||||||||||||    
T  1281276 gggtgatttagggtccattttgaccaaaaaatcacccatccgaattgtttttcattatattctaattgaataagtgatttcacata 1281191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 27535434 - 27535523
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||| | ||||||||||||| ||| | ||||||||| |||||| ||||||| |||||||||||||||||    
T  27535434 agaggggtgatttagggtcaatttttatccaaaaatcacccatccgaattgtttttccttctattctaattgtataagtgatttcacata 27535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 39533114 - 39533029
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||||||||||||| | |||  | ||||||||| ||||||| ||||||||||||||||||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttcacata 39533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 6667373 - 6667463
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaa-ttgaataagtgatttcacata 543  Q
    ||||| |||||||| |||||| |||||||||||||||||||| || | ||||||||  |||||| |||| |||||||||||||||||||||    
T  6667373 agaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaattgttttttcttctattctaatttgaataagtgatttcacata 6667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 10574363 - 10574448
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||| |||||||||||||||| | ||||||||| || ||||||||||||||||  ||||| |||||    
T  10574363 gggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttttatcctaattgaataaacgattttacata 10574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 17509346 - 17509258
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| ||| | || |||||| || |||||||||||||||||||||||||||||    
T  17509346 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 17543868 - 17543956
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| ||| | || |||||| || |||||||||||||||||||||||||||||    
T  17543868 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 42644654 - 42644743
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| |||||| |||||||||| | |   | ||||||||| ||||||||||||||||||||||||||||||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatttcacata 42644743  T

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Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 3266360 - 3266455
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttt------ttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| ||||| |||| ||||| |||||| | ||||||      ||| ||||||||||||||||||||||||||||||||    
T  3266360 agaggggtgatttatggtcaattttgatccaataatcatccctccgagttgttttttttcttccttctatcctaattgaataagtgatttcacata 3266455  T

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Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 32740734 - 32740820
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaa-atcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||  ||||| ||||||| |||| ||||||||  | | ||||||||| ||||||||||||||||||||||||||||||||    
T  32740734 gggtgatttagagtcaattttgaccaaaaaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgatttcacata 32740820  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 41287935 - 41288025
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctccta-tttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||| |||||||| ||| | |   |||||| |||||||||||||||||| |||||||||||||    
T  41287935 agaggggtgatttagggtcaattttgacccaataatcacccatccgagtgattttttccttctatcctaattgaataggtgatttcacata 41288025  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 539
Target Start/End: Original strand, 2622586 - 2622655
Alignment:
Q  470 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    ||||| ||||||||||||||||| | ||| | ||||||||| ||||||| ||||||||||||| ||||||    
T  2622586 gtcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttca 2622655  T

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Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 21954957 - 21954878
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    |||||||||| |||||| ||| |||||||| |||| | ||| | ||||||||||||||||||||||| ||||| |||||||    
T  21954957 gggtgatttagggtcaattttaacccaaaa-tcactcatccgagttgtttttcattctatcctaattaaataaatgatttc 21954878  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 543
Target Start/End: Complemental strand, 24320357 - 24320277
Alignment:
Q  463 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| |||||| |||||| |||||||||| | | | | ||||||||| ||||||| ||||| ||||||||||||||||||    
T  24320357 atttaaggtcaattttgactcaaaaatcactcattcgagttgtttttccttctatcttaatttaataagtgatttcacata 24320277  T

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Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 538
Target Start/End: Original strand, 39707272 - 39707351
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    |||||||||| |||||| |||||||||||| ||| | |||| | ||||||||| ||||||||||||| ||||||| |||||    
T  39707272 gggtgatttagggtcaattttgacccaaaa-tcatcactccgagttgtttttctttctatcctaattaaataagttatttc 39707351  T

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Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 43847083 - 43847137
Alignment:
Q  489 tcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| | ||||||||| |  |||||||||||||||||||||||||||||    
T  43847083 tcacccctccgaattgtttttcctcttatcctaattgaataagtgatttcacata 43847137  T

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Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 10094467 - 10094508
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  10094467 ttgtttttccttttatcctaattgaataagtgatttcacata 10094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 15674707 - 15674666
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| | ||||||||||||||||||||||||||||||    
T  15674707 ttgtttttcctcctatcctaattgaataagtgatttcacata 15674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 36719680 - 36719628
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttc 510  Q
    |||||||||| |||||| ||||| ||||||||||||||||| | |||||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttc 36719628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 498
Target Start/End: Original strand, 40761567 - 40761611
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcc 498  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatcacccctcc 40761611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 543
Target Start/End: Complemental strand, 14657917 - 14657877
Alignment:
Q  503 tgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacata 14657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 43244524 - 43244435
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  43244524 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 43244435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 455 - 542
Target Start/End: Complemental strand, 394416 - 394329
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttcacat 394329  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 31521962 - 31522049
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 31522049  T

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Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 7060302 - 7060391
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||| ||||| |||||| ||| ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7060391  T

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Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 22757072 - 22757161
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||| ||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcacata 22757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 29268920 - 29268831
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||| |||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacata 29268831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 44757185 - 44757096
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||| | | | ||||||||| ||||||||||||||||||||||||||||||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacata 44757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 51152105 - 51152192
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| ||||||  |||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacata 51152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 8712510 - 8712597
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| |||||||||||||||||||||| || ||||||||| |||||||||| |||| ||||||||||||||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatttcacata 8712597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 13965545 - 13965627
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttcacata 13965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 6911658 - 6911747
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  6911658 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttgtttttccttctaccttaattgaataagtgatttcacata 6911747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 24825627 - 24825716
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| ||||||| ||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  24825627 agaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttgtttttccttctatcctaattgaataagtgatttcacata 24825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 30202016 - 30202105
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| ||||||||||||||| ||| ||||||||| || |||| ||||||||||||||||||||||||    
T  30202016 agaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatttcacata 30202105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 478154 - 478066
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| | ||||||||| || ||||||||||||||||||||||| |||||    
T  478154 agaggggtgatttatggtcaattttgacccaaaaatca-ccatccgaattgtttttccttatatcctaattgaataagtgattttacata 478066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 24568856 - 24568767
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| ||| || ||||||||||||||||||| ||| | || |||||| |||||||||||||||||||||||||| |||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgattttacata 24568767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 24611942 - 24611853
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| || |||||||||||||||||||  | |  |||| | ||||||||||||||||||||||||||||||||    
T  24611942 agaggggtgatttatggtcaatttagacccaaaaatcacccctctaagtcattttcccttctatcctaattgaataagtgatttcacata 24611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 26742602 - 26742517
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| | |||| ||||||||||||||||||| ||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  26742602 gggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatttcacata 26742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 39837572 - 39837662
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| | |||| ||||| | || |||||||||||||||||||||||||||||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacata 39837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 24100117 - 24100206
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| ||||| |||||||| |||| ||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  24100117 agaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattgtttttccttctatcgtaattgaataagtgatttcacata 24100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 25658145 - 25658234
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| ||| || |||||| ||||||||||| |||| | ||||||||| |||| |||||||| ||||||||||||||||||    
T  25658145 agaggggtgatttagggttaattttgactcaaaaatcacctctccaaattgtttttccttctttcctaatttaataagtgatttcacata 25658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 26674354 - 26674439
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| | |||| ||||||| ||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||||||||||    
T  26674354 gggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttccttctatcataattgaataagtgatttcacata 26674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 29922812 - 29922904
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt---cattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||| |||||| ||||||| || |||||||||||| | ||||||||   | ||||||||||||||||||||||||||||||||    
T  29922812 agagaggtgatttagggtcaattttgacctaataatcacccctccaagttgttttttttctttctatcctaattgaataagtgatttcacata 29922904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 38944275 - 38944201
Alignment:
Q  469 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| |||| |||||||||||||||||| | ||||||||| ||||||| || |||||||||||||||||||||    
T  38944275 ggtcaattttggcccaaaaatcacccctccaaattgtttttccttctatcgtagttgaataagtgatttcacata 38944201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 11210456 - 11210367
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||| || ||||||||||||||| | || |||||| | | ||| ||||||||||||||||||||||||    
T  11210456 agaggggtgatttagggtcaattttgccctaaaaatcacccctccgaattatttttcctcccatcataattgaataagtgatttcacata 11210367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 537
Target Start/End: Original strand, 27394810 - 27394891
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt 537  Q
    |||||||||||| |||||| ||||||||||||||||||| |||   || |||||| ||||||||||||||||||||| ||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaattt 27394891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 5814330 - 5814414
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||| ||||| |||||||||| |||||| | ||||||| | ||||||| ||||||||||||| ||||||||||    
T  5814330 ggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttcccttctatcttaattgaataagttatttcacata 5814414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 543
Target Start/End: Complemental strand, 7083950 - 7083870
Alignment:
Q  463 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| |||||| ||||| |||||||||||||||   | ||||||||| ||||||| ||||||||||||||||||||||||    
T  7083950 atttagggtcaattttgatccaaaaatcacccctatgaattgtttttccttctatcataattgaataagtgatttcacata 7083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 543
Target Start/End: Original strand, 6881958 - 6882023
Alignment:
Q  478 tgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||| | | || |||||| ||||||||||||| ||||||||||||||||||    
T  6881958 tgacccaaaaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttcacata 6882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 7084184 - 7084273
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| |||||||||||||| |  | ||| ||||||||||| ||||| | ||||||||||||||||| ||||||    
T  7084184 agaggggtgatttaggttcaattttgacccaaaaattatgcttccgatttgtttttccttctaccttaattgaataagtgattgcacata 7084273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 7861344 - 7861259
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||   |||| |||||||||||||||||| |||  | || |||||| ||||||||||||| ||||||||||||||||||    
T  7861344 gggtgatttagaatcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacata 7861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 539
Target Start/End: Complemental strand, 20400038 - 20399961
Alignment:
Q  462 gatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    |||||| |||||| |||||||||||||||||||  || | ||| ||||  ||||||||||||||||||||||||||||    
T  20400038 gatttagggtcaattttgacccaaaaatcacccacccgaattgctttttcttctatcctaattgaataagtgatttca 20399961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 22049543 - 22049464
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    |||||||||| ||| || |||||||||||| |||||| | | | ||||||||| |||||||||||||||||||||||||||    
T  22049543 gggtgatttagggttaattttgacccaaaa-tcaccctttcgaattgtttttccttctatcctaattgaataagtgatttc 22049464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 19745369 - 19745456
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| | |||| ||||||||||||||||  | ||| | ||||||||  || |||||||||||||||| ||||||||||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19745456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 543
Target Start/End: Complemental strand, 19794437 - 19794350
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| | |||| ||||||||||||||||  | ||| | ||||||||  || |||||||||||||||| ||||||||||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19794350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 43493394 - 43493341
Alignment:
Q  490 cacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  43493394 cacccctccgaattgtttttccttctatcttaattgaataagtgatttcacata 43493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 20887889 - 20887810
Alignment:
Q  463 atttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    ||||| |||||| ||||||||||||||||||| ||| | || || ||  ||||||| ||||| |||||||||||||||||    
T  20887889 atttaaggtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat 20887810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 536
Target Start/End: Complemental strand, 626690 - 626609
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatt 536  Q
    |||||||||||||| ||  || ||||||||||||||||||| ||  | || |||||| ||||||| |||||||||||||||||    
T  626690 agaggggtgatttagggctaattttgacccaaaaatcacccatctgaattatttttc-ttctatcataattgaataagtgatt 626609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 543
Target Start/End: Original strand, 2447809 - 2447867
Alignment:
Q  485 aaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| | | || |||||  ||||||||||||||||||||||||||||||||    
T  2447809 aaaatcaccccttcgaattatttttttttctatcctaattgaataagtgatttcacata 2447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 45351205 - 45351124
Alignment:
Q  464 tttatggtcaaatttgacccaaaaatcacccctcctatttg-tttttcattctatcctaa-ttgaataagtgatttcacata 543  Q
    |||| |||||| ||||| ||||||||||||||||| | ||| |||||| || ||| |||| |||||||||||||||||||||    
T  45351205 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45351124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 45360684 - 45360603
Alignment:
Q  464 tttatggtcaaatttgacccaaaaatcacccctcctatttg-tttttcattctatcctaa-ttgaataagtgatttcacata 543  Q
    |||| |||||| ||||| ||||||||||||||||| | ||| |||||| || ||| |||| |||||||||||||||||||||    
T  45360684 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45360603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 39523435 - 39523475
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  39523435 ttgtttttccttttatcctaattgaataagtgatttcacat 39523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 538
Target Start/End: Complemental strand, 12717255 - 12717177
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    |||||||||  ||||| |||||||||||| ||| || ||| | ||||||||  ||||||||||||| |||||||||||||    
T  12717255 ggtgatttagagtcaattttgacccaaaa-tcatccgtccgacttgttttttcttctatcctaattaaataagtgatttc 12717177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 50801225 - 50801284
Alignment:
Q  484 aaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| || ||||| | || |||||| || |||||||||||||||||||||||||||||    
T  50801225 aaaaataactcctccgaattatttttccttttatcctaattgaataagtgatttcacata 50801284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 11819061 - 11819150
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 11819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 36691950 - 36691861
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacata 36691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 48652591 - 48652502
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 48652502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 3456921 - 3457010
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||||||| |||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttaacata 3457010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 14585440 - 14585529
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttcacata 14585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 30156432 - 30156344
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||| || |||||||||||||||||||||||||||||    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg-ttttccttttatcctaattgaataagtgatttcacata 30156344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 31270308 - 31270393
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||||||||||||||||| | | || |||||| ||||||||||||||||||||||||||||||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttcacata 31270393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 31462897 - 31462808
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || ||||||||||||||||||||||| |||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgattttacata 31462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 32080901 - 32080816
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| |||||||||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataggtgatttcacata 32080816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 536
Target Start/End: Complemental strand, 1075044 - 1074962
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatt 536  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||| || ||| ||||||||||||||||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt 1074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 4206662 - 4206573
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||| | |||||||||  | ||||||||||||||||||| |||||||||    
T  4206662 agaggggtgatttatggtcaattttgatcaaaaaatcacccctccgaattgtttttccatatatcctaattgaataagtgttttcacata 4206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 13702123 - 13702034
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||| |||||||| | | || |||||| ||||||| ||||||||||||||||||||||||    
T  13702123 agaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatttcacata 13702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 34961009 - 34960920
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | ||||||||  |||||| |||||||||||||||||||||||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacata 34960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 53155581 - 53155492
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||| | | | ||||||||| || |||||||||| ||||||||||||||||||    
T  53155581 agaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttcacata 53155492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 456 - 543
Target Start/End: Complemental strand, 54239167 - 54239080
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| ||| |||||||| | ||||||||| | ||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  54239167 aggggtgatttaaggttaaatttgatcaaaaaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttcacata 54239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 49628239 - 49628149
Alignment:
Q  454 agaggggtgatttatgg-tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||||||  | ||||||||| |||||||||| |||||||||||||||||||||    
T  49628239 agaggggtgatttttgggtcaattttgacctaaaaatcacccctctgaattgtttttccttctatcctagttgaataagtgatttcacata 49628149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 55090734 - 55090645
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| ||| || ||  ||||||||||||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||    
T  55090734 agaggggtgatttagggttaatttcaacccaaaaatcacccctccgatttgtttttccttctaccttaattaaataagtgatttcacata 55090645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 39610182 - 39610279
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttt--------ttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| | ||||||        ||| ||||||||||||||||||||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 39610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 543
Target Start/End: Original strand, 35174684 - 35174771
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||| | |||||| || ||||||||||||||||||   | ||||||||| ||||||||||||||||||||||||||||||||    
T  35174684 aggggttattaagggtcaatttcgacccaaaaatcacccctttgaattgtttttccttctatcctaattgaataagtgatttcacata 35174771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 27189545 - 27189456
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||  ||||| ||||| |||||||| || | ||| | ||||||||| ||||||||||||||||||||| ||||||||||    
T  27189545 agaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttccttctatcctaattgaataagtaatttcacata 27189456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 36624845 - 36624756
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| | ||||||   ||||||||||||||||| ||| | ||||||||| ||||||||||| | ||||||||||||||||||    
T  36624845 agaggggtgattcagggtcaatcatgacccaaaaatcacccatccgaattgtttttccttctatcctaactaaataagtgatttcacata 36624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 48400877 - 48400966
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||  | ||||||||| ||||| |||| || ||||||||||||||||||    
T  48400877 agaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatttcacata 48400966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 460 - 537
Target Start/End: Original strand, 53402614 - 53402691
Alignment:
Q  460 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgattt 537  Q
    |||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||| |||||| ||||||||||||    
T  53402614 gtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctattctaattcaataagtgattt 53402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 543
Target Start/End: Complemental strand, 24483813 - 24483740
Alignment:
Q  470 gtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| |||||| || ||||||||| ||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  24483813 gtcaattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgatttcacata 24483740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 38527241 - 38527330
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | ||||  |||| ||||||||||| | ||| | ||||||||| ||||||| ||||||||||| ||||||||||||    
T  38527241 agaggggtgatttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttccttctatcttaattgaataaatgatttcacata 38527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 40013421 - 40013334
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattcta---tcctaattgaataagtgatttcacata 543  Q
    |||||||||  ||||| ||||||||||||||||||| | | | ||||||||| |||||   |||||||||||||||||||||||||||    
T  40013421 ggtgatttagtgtcaattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttcacata 40013334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 22484965 - 22485032
Alignment:
Q  476 tttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||| | |||   ||||||||| ||||||||||||||||||||||||||| ||||    
T  22484965 tttgacccaaaaatcactcttccggattgtttttccttctatcctaattgaataagtgatttcgcata 22485032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 19645203 - 19645288
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||| ||||| || || ||| | ||||||||  |||| |||||||| ||||||||||||||||||    
T  19645203 gggtgatttagggtcaattttgacctaaaaaccatccatccgaattgttttttcttctgtcctaattaaataagtgatttcacata 19645288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 543
Target Start/End: Complemental strand, 41868394 - 41868356
Alignment:
Q  505 tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacata 41868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 4817949 - 4817892
Alignment:
Q  486 aaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||||| | ||||||||| || ||||||||||||||| |||||||||||||    
T  4817949 aaattacccctccaaattgtttttctttttatcctaattgaataggtgatttcacata 4817892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 383
Target Start/End: Complemental strand, 4512893 - 4512853
Alignment:
Q  343 aatgggtcaaacataatttaaagtgaagcgaccaaataact 383  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  4512893 aatgggttagacataatttaaagtgaagcgaccaaataact 4512853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 48854889 - 48854939
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt 509  Q
    ||||||||  |||||| ||| ||||||||||||||||||| ||||||||||    
T  48854889 ggtgattttgggtcaattttaacccaaaaatcacccctccgatttgttttt 48854939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 2147756 - 2147788
Alignment:
Q  506 ttttcattctatcctaattgaataagtgatttc 538  Q
    ||||| |||||||||||||||||||||||||||    
T  2147756 ttttcgttctatcctaattgaataagtgatttc 2147788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 49628194 - 49628238
Alignment:
Q  454 agaggggtgatttat-ggtcaaatttgacccaaaaatcacccctc 497  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||    
T  49628194 agaggggtgatttttaggtcaaaattgacccaaaaatcacccctc 49628238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 7e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 9690116 - 9690027
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||| |||||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatctcacata 9690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 17268267 - 17268178
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | | ||||||||| ||||||||||||||||||||||||||||||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacata 17268178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 44942267 - 44942352
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttcttctatcctaattgaataagtgatttcacata 44942352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 541
Target Start/End: Complemental strand, 43474271 - 43474184
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcaca 541  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||    
T  43474271 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcaca 43474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 11938002 - 11937912
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt-cattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacata 11937912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 12704665 - 12704754
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || |||||||||||||||||||||||||||||    
T  12704665 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttcacata 12704754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 15919852 - 15919941
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||    
T  15919852 agaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttcacata 15919941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 22597113 - 22597202
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttgtttttccttctatcctaattaaataagtgatttcacata 22597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 25067830 - 25067919
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  25067830 agagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttcacata 25067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 27095687 - 27095772
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 27095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 5754266 - 5754355
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||| |||||||||| |||||||| ||||||||||||    
T  5754266 agaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttccttctatcctagttgaataaatgatttcacata 5754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 20561275 - 20561186
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| |||||||| ||| ||||||||| |||||||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacata 20561186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 9978812 - 9978723
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| || |||| ||||||||||| ||||||||||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttcacata 9978723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 18089535 - 18089446
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| ||||||||||| ||||| | ||||||||  || |||||||||||||||||||||||||||||    
T  18089535 agaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacata 18089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 543
Target Start/End: Original strand, 33012059 - 33012144
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatttcacata 33012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 539
Target Start/End: Complemental strand, 13740801 - 13740718
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttca 539  Q
    ||||| |||||||||||||  |||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||    
T  13740801 gagggatgatttatggtcat-tttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttca 13740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 38384585 - 38384497
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||||||||||||  |||||| |||||||||||||||||  |||| ||||||||||| || || |||||||||||||||||||||||||    
T  38384585 agaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttgtttttccttataccctaattgaataagtgatttcacat 38384497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 34416904 - 34416815
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| |||| || |||||| ||||||| |||||||| |||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  34416904 agagggatgatctaaggtcaattttgaccaaaaaatcatccctccgaattgtttttccttatatcctaattgaataagtgatttcacata 34416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 36867986 - 36868075
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||| |||||||||||||||  | ||||||||| |||||| |||||| |||||| |||||||||||    
T  36867986 agaggggtgatttagggtcaattttgactcaaaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttcacata 36868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 38535448 - 38535359
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||| |||||||   | || |||||| ||||||| ||||||||||||||||||||||||    
T  38535448 agaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttcacata 38535359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 35333490 - 35333572
Alignment:
Q  461 tgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| | |||| |||||||||||||||||||||   | ||||||||| | ||||||||||||||||||||||||||||||    
T  35333490 tgatttaggatcaattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaataagtgatttcacata 35333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 4604446 - 4604361
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||| |||||||||||||| || | | | | ||||||||| |||||| |||||||||||||||||||||||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttcacata 4604361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 543
Target Start/End: Original strand, 4739310 - 4739396
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||| | ||||||||| ||| ||||||||| ||||||| ||||||||||    
T  4739310 gaggggtgatttagggtcaa--ttgaccccaaaatcacccctccgagttgtttttccttccatcctaattaaataagtaatttcacata 4739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 32015198 - 32015291
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaata----agtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||| || |||| ||||| ||||    ||||||||||||||    
T  32015198 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttatatcataattcaataaataagtgatttcacata 32015291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 34963208 - 34963121
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||||||| ||||  |||||| ||||||| ||||||||||| ||  ||||||||||| ||||| |||||||||||||||||||||||||    
T  34963208 agaggggtaattttgggtcaattttgacctaaaaatcaccc-tctgatttgtttttccttctaccctaattgaataagtgatttcacat 34963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 454 - 541
Target Start/End: Complemental strand, 7073091 - 7073004
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcaca 541  Q
    |||||||||||||| |||||| ||||||||||||||| ||| | | | ||| ||||| ||||||||||||||||||||| | ||||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaacttcaca 7073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 31908959 - 31908870
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| |||||||  ||||| ||||| ||||||||||||| ||| | ||||||||  || ||||||| |||||||||||||||||||||    
T  31908959 agagggatgatttagagtcaattttgatccaaaaatcacccttccgaattgttttttcttttatcctagttgaataagtgatttcacata 31908870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 13879157 - 13879060
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--------cattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| |||||||||| |||||||||||| | ||||||||        | ||||||||||||||||||||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 13879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 14019282 - 14019185
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--------cattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| |||||||||| |||||||||||| | ||||||||        | ||||||||||||||||||||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 14019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 543
Target Start/End: Original strand, 4732059 - 4732138
Alignment:
Q  464 tttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||| |||||| |||||||||||| |  || |||  |||| ||||||||||||||||||||||||||||||||    
T  4732059 tttagggtcaattttgactcaaaaatcacccttgttagttgcatttccttctatcctaattgaataagtgatttcacata 4732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 464 - 543
Target Start/End: Original strand, 34470952 - 34471033
Alignment:
Q  464 tttatggtcaaatttgacccaaaaatcac--ccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| |||||| |||||||||||||||||  |||||| | |||||| || ||||||| ||||||||| ||||||||||||||    
T  34470952 tttagggtcaattttgacccaaaaatcacacccctccgaattgtttatctttctatcttaattgaatcagtgatttcacata 34471033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 12891232 - 12891188
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcc 498  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcacccctcc 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 543
Target Start/End: Complemental strand, 4426755 - 4426712
Alignment:
Q  500 atttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  4426755 atttgtttttccttctatcctaattgaataaatgatttcacata 4426712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 10287133 - 10287060
Alignment:
Q  469 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||  ||||||||||||||| | |||  |||| || |||||||||||||||||||||||||||||    
T  10287133 ggtcaattttgacataaaaatcacccctccgaattgcatttcttt-tatcctaattgaataagtgatttcacata 10287060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 538
Target Start/End: Complemental strand, 11798653 - 11798576
Alignment:
Q  460 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    ||||||||||||||| |||||||| ||||||||||||||   ||| ||||| || |||||||||| ||||||| |||||    
T  11798653 gtgatttatggtcaattttgaccc-aaaatcacccctccatgttgcttttccttatatcctaattaaataagtaatttc 11798576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 28262032 - 28261966
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaatt 524  Q
    |||||||||| |||||| ||||||||||||||||| | ||| | ||||||||| ||||||| |||||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctatcataatt 28261966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 17767690 - 17767611
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttc 538  Q
    ||||||||||  ||||| ||||||||| || |||||||| | | ||||||||| || |||||||||| |||||||||||||    
T  17767690 gggtgatttagagtcaattttgacccagaa-tcaccccttcgagttgtttttccttatatcctaattaaataagtgatttc 17767611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 8799510 - 8799548
Alignment:
Q  353 acataatttaaagtgaagcgaccaaataactcattataa 391  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  8799510 acataatttaaaatgaagtgaccaaataactcattataa 8799548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 28231240 - 28231151
Alignment:
Q  454 agaggggtgatttatgg-tcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||| ||| | ||| ||||||| ||| |||||| ||| | ||||||||| ||||||| |  |||||||||||||||||||||    
T  28231240 agaggggtgatttttgggttaaaattgaccctaaa-tcacccatccgaattgtttttccttctatcttggttgaataagtgatttcacata 28231151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 32314468 - 32314509
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||  ||||||||||||||||||| ||||||||||||    
T  32314468 ttgttttttcttctatcctaattgaataaatgatttcacata 32314509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 1229 - 1140
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||| ||||| ||||||||||||||||||||||||||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacata 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 1 - 42
Alignment:
Q  502 ttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacata 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 6420001 - 6419912
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatttcacata 6419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 12481513 - 12481424
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | |||| ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 12481424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 15590222 - 15590133
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||  ||||||||||||||||||||||||||||||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgatttcacata 15590133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 21507951 - 21507862
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||| | ||||||||| |||||||||| |||||||||||||||||||||    
T  21507951 agaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttcacata 21507862  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 14783314 - 14783225
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||| ||||||| |||||| ||||||||||||||||| ||||| | ||||||||| |||||||||| |||||||||||||||||||||    
T  14783314 agagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacata 14783225  T

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Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 31937557 - 31937473
Alignment:
Q  458 gggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||| |||||  ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccctccgaattgtttttc-ttctatcctaattgaataagtgatttcacata 31937473  T

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Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 8693803 - 8693711
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattcta---tcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| |||||   |||||||||||||||||||||||||||    
T  8693803 agaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttcacata 8693711  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 23654228 - 23654317
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||| |||||| ||||||||||||||||||| ||| ||||||||||| ||||| | ||| ||||||||||||||||||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttccttctaccttaactgaataagtgatttcacata 23654317  T

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Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 29927516 - 29927447
Alignment:
Q  460 gtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaata 529  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatcactcctccaagttgtttttccttctatcctaattgaata 29927447  T

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Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 455 - 543
Target Start/End: Complemental strand, 35220045 - 35219958
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||| |||||| |||||| |||||||||||||||| | ||| ||||| |||||||| ||| ||||||||||| |||||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttg-ttttccttctatccgaatcgaataagtgatatcacata 35219958  T

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Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 543
Target Start/End: Complemental strand, 4922023 - 4921935
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgttttt--cattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||| |||||||||||||| |||||||| | | ||||||  | ||||||| ||||||||||||||||||||||||    
T  4922023 aggggtgatttagggtcaattttgacccaaaaat-acccctcccagtagtttttttccttctatcttaattgaataagtgatttcacata 4921935  T

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Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 2304953 - 2304864
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| | || | |||||||||||||||| |||||  | ||||||| | |||| || ||||||||||||||||||||||||    
T  2304953 agaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagttgttttcccttctgtcataattgaataagtgatttcacata 2304864  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 543
Target Start/End: Complemental strand, 19402950 - 19402862
Alignment:
Q  455 gaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||||||  |||||  ||||| |||||||||||||||   | ||||||||| || |||| |||||||| |||||||||||||||    
T  19402950 gaggggtgatttcgggtcacttttgatccaaaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatttcacata 19402862  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 518
Target Start/End: Original strand, 4084996 - 4085060
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatc 518  Q
    |||||||||||||| |||||| ||||||| |||||||| || ||| | ||||||||| |||||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatcatccttccgaattgtttttccttctatc 4085060  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 543
Target Start/End: Original strand, 4393777 - 4393837
Alignment:
Q  483 caaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||||  | ||||||| | |||||||||||| ||| |||||||||||||||    
T  4393777 caaaaatcacccctctgagttgttttaccttctatcctaatagaacaagtgatttcacata 4393837  T

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Target: scaffold0155 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 35065 - 35149
Alignment:
Q  459 ggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||||| |||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacata 35149  T

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Target: scaffold0536 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 2878 - 2969
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttg--tttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | |||  |||||| ||||||||||||||||||||||||||||||||    
T  2878 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttccttctatcctaattgaataagtgatttcacata 2969  T

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Target: scaffold0321 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 7252 - 7178
Alignment:
Q  469 ggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||    
T  7252 ggtccaatttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 7178  T

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Target: scaffold0056 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 74142 - 74231
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||| ||||||||   |||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  74142 agaggagtgatttagaatcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacata 74231  T

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Target: scaffold0001 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 404401 - 404312
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    ||||||| |||||| |||||| ||||| ||||||||||||| ||| | | ||||||| | ||||||||||||||||||||||||||||||    
T  404401 agaggggcgatttaaggtcaattttgatccaaaaatcacccatccgaatagtttttcttgctatcctaattgaataagtgatttcacata 404312  T

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Target: scaffold0432 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 543
Target Start/End: Complemental strand, 2557 - 2471
Alignment:
Q  456 aggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||||||| |||||  ||||||||||||||||||| ||  | ||||||||| ||||||| |||| |||||||||||||||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcaccc-tctgagttgtttttccttctatcataatcgaataagtgatttcacata 2471  T

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Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 13392 - 13300
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcc----tatttgtttttcattctatcctaattgaataagtgatttcacat 542  Q
    |||| ||||||||| |||||| ||||| |||||||||||||||||    | ||| |||||  || ||||||||||||||||||||||||||||    
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataagtgatttcacat 13300  T

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Target: scaffold1350 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 1553 - 1641
Alignment:
Q  454 agaggggtgatttatggtcaaatttgacccaaaaatcacccctcctatttgtttttcattctatcctaattgaataagtgatttcacata 543  Q
    |||||||| ||||| | || | |||||||||||||||||| |||  |||| | |||| ||||| | ||||||||||||||||||||||||    
T  1553 agaggggtaatttaggttccattttgacccaaaaatcacctctctgattt-tgtttccttctaccataattgaataagtgatttcacata 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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