View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6904_low_6 (Length: 209)
Name: NF6904_low_6
Description: NF6904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6904_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 29146204 - 29146345
Alignment:
| Q |
50 |
aaaatctggccttaattaactagaacttttgattattgaatcttagctgttttcttttgattagcaccatttctaatttctaattacagtaaagaagtgt |
149 |
Q |
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| T |
29146204 |
aaaatctggccttaattaactagatcttttgattattgaatcttagctgttttcttttgattagcaccatttctaatttctaattacagtaaagaagtgt |
29146303 |
T |
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| Q |
150 |
gagaaagtaaagctagccaatgccataatctagtttgtggac |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
29146304 |
gagaaagtaaagctagccaatgccataatctagtttgtggac |
29146345 |
T |
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