View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6905_low_7 (Length: 346)
Name: NF6905_low_7
Description: NF6905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6905_low_7 |
 |  |
|
| [»] scaffold0009 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 26677300 - 26677636
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccactcaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26677300 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccataaaatccgaaactagattatccaagcctaccctgtccataccaccactcaaat |
26677399 |
T |
 |
| Q |
101 |
accacacttccnnnnnnnnntc-aaccatcacgcacgcaactatctccatcacaccaatcaaacaccaataacttcgctacccttcccgttggccaccac |
199 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26677400 |
accacacttccaaaaaaaaaaccaaccatcacgcacgcaactatctccatcacaccaagcaaacaccaataacctcgctacccttcccgttggccaccac |
26677499 |
T |
 |
| Q |
200 |
ctattttgccaccatttagacatcactgaaaacaccgtaagaaacgattttgatgctctgtctccctgctacatcaccgccgccacataccacaaaaccg |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||| |
|
|
| T |
26677500 |
ctattttgccaccatttagacatcactgaaaacaccgtaagaaacgattttgatgctccgtctccctactacatcaccgccaccacacaccacaaaaccg |
26677599 |
T |
 |
| Q |
300 |
ccaccacacaca-aacccgaaacccggttcttctcac |
335 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26677600 |
ccaccacacacacaacccgaaacccggttcttctcac |
26677636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13980622 - 13980936
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaa-ctagattatccaagcctaccccgtccataccaccactcaaa |
99 |
Q |
| |
|
||||||||||||| |||||| ||||||| || |||||||| |||||| |||| |||| |||||||||||||||||||||| |||||| ||||| |||| |
|
|
| T |
13980622 |
aaacaaaagttgtgtcaaatcactcaaacgtcctcacaagccgccacagaatctgaaaactagattatccaagcctaccccatccatatcaccatgcaaa |
13980721 |
T |
 |
| Q |
100 |
aaccaca-cttccnnnnnnnnntcaaccatcacgcacgcaactatct----ccatcacaccaatcaaacaccaataacttcgctacccttcccgttggcc |
194 |
Q |
| |
|
||||||| |||| |||||| ||||||| ||| ||| || ||||||||||| ||||||||||||| |||||| || ||||||||||| |
|
|
| T |
13980722 |
aaccacaacttc--aaaaaccctcaaccgtcacgcaagcagctagctacctccatcacaccacgcaaacaccaataatctcgctaaccctcccgttggcc |
13980819 |
T |
 |
| Q |
195 |
accacctattttgccaccatttagacatcactgaaaac-accgtaagaaacgattttgatgctctgtctccctgctacatcaccgccgccacataccaca |
293 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||| |||||| | |||||||||||||| ||||||| ||| ||| || |||||| || ||||| |||||| |
|
|
| T |
13980820 |
accacccattttgccaccgtttaaacatcaccgaaaacaaacgtaagaaacgattccgatgctccatcttcctactgaatcaccaccaccacacaccaca |
13980919 |
T |
 |
| Q |
294 |
aaaccgccaccacacac |
310 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
13980920 |
aaaccaccaccacacac |
13980936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 19657914 - 19657960
Alignment:
| Q |
5 |
aaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
19657914 |
aaaagttgtaccaaattcctcaaacatcatcacaagctgccacaaaa |
19657960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54230287 - 54230353
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattat |
67 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| ||||| |
|
|
| T |
54230287 |
aaacaaaagttgtattaaatccttcaaacatcatcacaagctgccataaaatctgaatctaaattat |
54230353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6409579 - 6409628
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
6409579 |
aaacaaaagttgcaccaaaatcctcaaacatcatcacaa-ctgccacaaaa |
6409628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 51266977 - 51267309
Alignment:
| Q |
5 |
aaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccactcaaaaacca |
104 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
51266977 |
aaaagttgtaccaaattcctcaaatatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccgcgcaaaaacca |
51267076 |
T |
 |
| Q |
105 |
cacttccnnnnnnnnntc-aaccatcacgcacgcaactatctccatcacaccaatcaaacaccaataacttcgctacccttcccgttggccaccacctat |
203 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| || |
|
|
| T |
51267077 |
cacttccaaaaaaaaccccaaccatcacgcacgcaactatctccatcacaccacacaaacactaataacctcgctacccttcccgttggccaccacccat |
51267176 |
T |
 |
| Q |
204 |
tttgccaccatttagacatcactgaaaacaccgtaagaaacgattttgatgctctgtctccctgctacatcaccgccgccacataccacaaaaccgccac |
303 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
51267177 |
tttgccaccatttagacatcaccgaaaacaccgtaagaaacgattatgatgcttcgtctccctactacatcaccgccaccacacaccacaaaaccgccac |
51267276 |
T |
 |
| Q |
304 |
cacacaca-aacccgaaacccggttcttctcac |
335 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |
|
|
| T |
51267277 |
cacacacacaacccgaaatccggttcttctcac |
51267309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 66 - 292
Target Start/End: Original strand, 27261146 - 27261370
Alignment:
| Q |
66 |
atccaagcctaccccgtccataccaccactcaaaaaccacacttccnnnnnnnnntcaaccatcacgcacgcaactatctccatcacaccaatcaaacac |
165 |
Q |
| |
|
||||||||||||||| |||| | |||||| |||||||||||| ||| ||||||||||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
27261146 |
atccaagcctaccccatccaaaacaccacgcaaaaaccacacctccaaaaaaccc-caaccatcacgcaagcaactatttccatcacaccacgcaaacac |
27261244 |
T |
 |
| Q |
166 |
caataacttcgctacccttcccgttggccaccacctattttgccaccatttagacatcactgaaaac-accgtaagaaacgattttgatgctctgtctcc |
264 |
Q |
| |
|
||||||| |||||| || |||||||| |||||| | ||||||| |||||||||||||||| ||||| ||||||| |||| || |||||||| |||| | |
|
|
| T |
27261245 |
caataacctcgctaaccctcccgttgaccaccatccattttgctaccatttagacatcaccaaaaacaaccgtaaaaaac--ttatgatgctccgtctgc |
27261342 |
T |
 |
| Q |
265 |
ctgctacatcaccgccgccacataccac |
292 |
Q |
| |
|
|| ||||||||||||| ||||| ||||| |
|
|
| T |
27261343 |
ctactacatcaccgccaccacacaccac |
27261370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14993536 - 14993586
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
14993536 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagccgtcacaaaa |
14993586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27741700 - 27741650
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
27741700 |
aaacaaaagttgtactaaatccctcaaacatcatcacaagttgccacaaaa |
27741650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 27262041 - 27262096
Alignment:
| Q |
281 |
gccacataccacaaaaccgccaccacacaca-aacccgaaacccggttcttctcac |
335 |
Q |
| |
|
|||||| ||||||||||| ||||||||| | |||||||||||||||||||||||| |
|
|
| T |
27262041 |
gccacacaccacaaaaccttcaccacacatacaacccgaaacccggttcttctcac |
27262096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 19289933 - 19290193
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccactcaaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
19289933 |
aaacaaaagttgtaccagatccctcaaacatcatcacaagttgccacaaaatccgaaactagattatccaagcctaccccatccataccaccatgcaaaa |
19290032 |
T |
 |
| Q |
101 |
accacacttccnnnnnnnnntcaaccatcacgcacgcaactatctccatcacaccaatcaaacaccaataacttcgct-acccttcccgttggccaccac |
199 |
Q |
| |
|
| ||||| ||| ||||||||||||| ||| ||||||||||||||||| ||||||| |||||| ||||| | || |||||||||||||||| |
|
|
| T |
19290033 |
atcacacctccaaaacccccccaaccatcacgcaagcagctatctccatcacaccacgcaaacactaataacctcgctaaaccctcccgttggccaccac |
19290132 |
T |
 |
| Q |
200 |
ctattttgccaccatttagacatcactgaaaac-accgtaagaaacgattttgatgctctg |
259 |
Q |
| |
|
| ||||| ||||| |||| ||||||| ||| | |||||||||||| ||| |||||||||| |
|
|
| T |
19290133 |
ccattttaccaccgtttaaacatcaccaaaagcaaccgtaagaaacaattatgatgctctg |
19290193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3958919 - 3958813
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccactcaaaa |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||| |
|
|
| T |
3958919 |
aaacaaaagttgcaccaaatccctcaaatatcgtcacaagctgccacaaaatccgaaactagattatccacgcctaccccatccatacccccacgcaaaa |
3958820 |
T |
 |
| Q |
101 |
accacac |
107 |
Q |
| |
|
||||||| |
|
|
| T |
3958819 |
accacac |
3958813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 27844566 - 27844699
Alignment:
| Q |
125 |
ccatcacgcacgcaactatctccatcacaccaatcaaacaccaataacttcgct-acccttcccgttggccaccacctattttgccaccatttagacatc |
223 |
Q |
| |
|
||||||| || ||| ||||||||||||||||| |||||||||||||| ||| | | || ||| ||||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
27844566 |
ccatcacacaagcagctatctccatcacaccacgcaaacaccaataacctcgttaaaccctcctgttggcc-ccacccattttgccaccatttaaacatc |
27844664 |
T |
 |
| Q |
224 |
actgaaaac-accgtaagaaacgattttgatgctc |
257 |
Q |
| |
|
|| ||| | ||||||| ||||||||||||||||| |
|
|
| T |
27844665 |
accaaaagcaaccgtaaaaaacgattttgatgctc |
27844699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 331
Target Start/End: Original strand, 27844699 - 27844755
Alignment:
| Q |
276 |
ccgccgccacataccacaaaaccgccaccacacaca-aacccgaaacccggttcttc |
331 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
27844699 |
ccgccaccacaaaccacaagaccgccaccacacacacaacccgaaacccgtttcttc |
27844755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13995324 - 13995217
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaatccgaaactagattatccaagcctaccccgtccataccaccactcaaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||| |
|
|
| T |
13995324 |
aaacaaaagttgtaccaaatccctcaaacattctcacaagctgccacaaaatccgaaactagattattcaagcctacctcatccataccaccacgcaaaa |
13995225 |
T |
 |
| Q |
101 |
accacact |
108 |
Q |
| |
|
|||||||| |
|
|
| T |
13995224 |
accacact |
13995217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 13995184 - 13995006
Alignment:
| Q |
159 |
caaacaccaataacttcgctacccttcccgttggccaccacctattttgccaccatttagacatcactgaaaaca-ccgtaagaaacgattttgatgctc |
257 |
Q |
| |
|
|||||||||||||| |||||| || |||| |||||||||||| ||||||| ||| |||| ||||||| |||||| ||||||||||||||| | |||||| |
|
|
| T |
13995184 |
caaacaccaataacctcgctaaccctcccattggccaccacccattttgcaaccgtttaaacatcaccaaaaacaaccgtaagaaacgattctaatgctc |
13995085 |
T |
 |
| Q |
258 |
tgtctccctgctacatcaccgccgccacataccacaaaaccgccaccacacaca-aacccgaaacccggttcttctcac |
335 |
Q |
| |
|
||||| ||| || |||||||||| ||||| |||||||||||||||||| ||||| |||| ||||| | |||||||||| |
|
|
| T |
13995084 |
tgtcttcctactgcatcaccgccaccacacaccacaaaaccgccaccatacacacaacctaaaacctgtttcttctcac |
13995006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 6443585 - 6443630
Alignment:
| Q |
5 |
aaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
6443585 |
aaaagttgtaccaaaatcctcaaacatcatcacaa-ctgccacaaaa |
6443630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22577402 - 22577452
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22577402 |
aaacaaaggttgtaccaaatccctcaaacatcatcacaagcagccacaaaa |
22577452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3524113 - 3524064
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
3524113 |
aaacaaaagttgtaccaaaatcctcaaacatcatcacaa-ctgccacaaaa |
3524064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21880981 - 21881030
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
21880981 |
aaacaaaagttgtaccaaaatcctcaaacatcgtcacaa-ctgccacaaaa |
21881030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 15150435 - 15150483
Alignment:
| Q |
260 |
tctccctgctacatcaccgccgccacataccacaaaaccgccaccacac |
308 |
Q |
| |
|
||||||| || ||||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
15150435 |
tctccctactgcatcaccaccgccacacaccacaaaaccgctaccacac |
15150483 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 54030 - 54067
Alignment:
| Q |
6 |
aaagttgtaccaaatccctcaaacatcatcacaagctg |
43 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
54030 |
aaagttgtaccaaaaccctcaaacatcatcacaagctg |
54067 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25444603 - 25444553
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
|||||||||||| | |||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
25444603 |
aaacaaaagttggatcaaaaccctcaaacatcatcgcaagctgctacaaaa |
25444553 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27170669 - 27170620
Alignment:
| Q |
1 |
aaacaaaagttgtaccaaatccctcaaacatcatcacaagctgccacaaaa |
51 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
27170669 |
aaacaaaagttgtaccaaaatcctcaaacatcgtcacaa-ctgccacaaaa |
27170620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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