View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6905_low_9 (Length: 252)
Name: NF6905_low_9
Description: NF6905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6905_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 26332085 - 26331854
Alignment:
| Q |
7 |
gctctcttacaaccaaattgggatcaagcccctaacctccaattcgaagctgtgtttatcatatcagttgactaatggttttaatttaactttttaaact |
106 |
Q |
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| T |
26332085 |
gctctcttacaaccaaattgggatctagaccctaacctccaattcgaagctgtgtttatcatatcagttgactaatggttttaatttaactttttaaact |
26331986 |
T |
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| Q |
107 |
tagtttaaagtcctttgaatttgacttacaccactgcattatgcataaaacagaatttctccatgcagaaaatctcattcctaggccctatcatgctcat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26331985 |
tagtttaaagtcctttgaatttgacttacaccactgcattatgcatcaaacagaatttctccatgcagaaaatctcattcctaggccctatcatgctcat |
26331886 |
T |
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| Q |
207 |
gtctttgtggggcttcataacttgtaataatt |
238 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
26331885 |
gtctttgtggggcttcataacttgtaataatt |
26331854 |
T |
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