View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6906_low_10 (Length: 247)
Name: NF6906_low_10
Description: NF6906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6906_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 39596103 - 39595896
Alignment:
| Q |
17 |
gagaagaaggaaatcagacatctcttcctctttttaattgattttccataatttgaatcagttagagacaatgttgtgttgcggttgcttgaattcaagt |
116 |
Q |
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| T |
39596103 |
gagaagaaggaaatcagacatctcttcctctttttaattgattttccataatttgaatcagttagagacaatgttgtgttgcggttgcttgaattcaagt |
39596004 |
T |
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| Q |
117 |
tcagctcataaccacacgaaccacagctgcatcaatatcacaacacaattcaaattaaaacattcataaataataataatctacacaaacattacataga |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39596003 |
tcagctcataaccacacgaaccacagctgcatcaatatcacaacacaattcaaattaaaacattcataaataataataatctacacaaacattacataga |
39595904 |
T |
|
| Q |
217 |
gaccgaga |
224 |
Q |
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|||||||| |
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| T |
39595903 |
gaccgaga |
39595896 |
T |
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