View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6907_low_1 (Length: 573)

Name: NF6907_low_1
Description: NF6907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6907_low_1
NF6907_low_1
[»] chr5 (42 HSPs)
chr5 (327-558)||(16635631-16635862)
chr5 (1-113)||(9596143-9596256)
chr5 (1-113)||(9737684-9737797)
chr5 (1-113)||(43348701-43348814)
chr5 (1-180)||(43358410-43358590)
chr5 (1-181)||(3631258-3631439)
chr5 (1-181)||(26525207-26525388)
chr5 (1-113)||(15374182-15374295)
chr5 (1-113)||(16823198-16823311)
chr5 (1-113)||(30772946-30773059)
chr5 (1-113)||(32304630-32304743)
chr5 (3-113)||(7440460-7440571)
chr5 (1-113)||(25701398-25701511)
chr5 (1-113)||(29390336-29390449)
chr5 (1-113)||(8074216-8074329)
chr5 (2-113)||(5844173-5844285)
chr5 (1-115)||(7440344-7440460)
chr5 (1-113)||(3631439-3631553)
chr5 (182-272)||(16635484-16635574)
chr5 (1-113)||(26296985-26297099)
chr5 (1-181)||(13013232-13013413)
chr5 (1-113)||(19577157-19577271)
chr5 (1-113)||(41084558-41084672)
chr5 (1-113)||(10925576-10925689)
chr5 (1-108)||(41817525-41817634)
chr5 (1-115)||(26785008-26785124)
chr5 (1-113)||(32304516-32304630)
chr5 (1-113)||(43348814-43348928)
chr5 (1-113)||(13084620-13084733)
chr5 (1-112)||(20487040-20487153)
chr5 (1-113)||(16823311-16823425)
chr5 (1-113)||(20656834-20656948)
chr5 (1-113)||(26525093-26525207)
chr5 (1-113)||(30773059-30773173)
chr5 (1-113)||(43358590-43358704)
chr5 (1-113)||(9596029-9596143)
chr5 (1-107)||(8074102-8074210)
chr5 (1-62)||(15374332-15374394)
chr5 (136-181)||(32379625-32379670)
chr5 (137-181)||(9737821-9737865)
chr5 (137-181)||(19577294-19577338)
chr5 (137-181)||(26784911-26784955)
[»] chr3 (49 HSPs)
chr3 (1-119)||(11232133-11232252)
chr3 (1-108)||(32270898-32271006)
chr3 (1-113)||(12251486-12251599)
chr3 (1-121)||(22729279-22729400)
chr3 (1-182)||(29126022-29126204)
chr3 (1-181)||(52571403-52571584)
chr3 (1-121)||(1092856-1092977)
chr3 (1-113)||(27742553-27742666)
chr3 (1-109)||(28952370-28952479)
chr3 (1-121)||(44254579-44254700)
chr3 (1-113)||(52202049-52202162)
chr3 (1-113)||(44205479-44205593)
chr3 (1-181)||(7160268-7160450)
chr3 (1-181)||(18163717-18163898)
chr3 (1-181)||(36633486-36633667)
chr3 (1-113)||(13594852-13594965)
chr3 (1-113)||(21259413-21259526)
chr3 (1-113)||(50527612-50527725)
chr3 (1-119)||(35083854-35083973)
chr3 (1-181)||(49169792-49169973)
chr3 (1-113)||(13594738-13594852)
chr3 (1-121)||(49657190-49657311)
chr3 (1-113)||(32270783-32270898)
chr3 (29-112)||(34660814-34660898)
chr3 (1-113)||(11232019-11232133)
chr3 (1-113)||(44254465-44254579)
chr3 (1-113)||(50527498-50527612)
chr3 (1-66)||(16908797-16908862)
chr3 (3-113)||(12251374-12251486)
chr3 (1-113)||(25246202-25246316)
chr3 (1-110)||(28952256-28952367)
chr3 (1-113)||(22729400-22729514)
chr3 (1-101)||(31174537-31174639)
chr3 (1-113)||(49657076-49657190)
chr3 (29-113)||(36633667-36633752)
chr3 (1-113)||(45045390-45045503)
chr3 (1-113)||(4618218-4618329)
chr3 (138-181)||(25246343-25246386)
chr3 (1-113)||(1092742-1092856)
chr3 (1-113)||(16908683-16908797)
chr3 (1-113)||(21259185-21259299)
chr3 (1-113)||(21259299-21259413)
chr3 (1-113)||(29125908-29126022)
chr3 (1-113)||(35083973-35084087)
chr3 (1-113)||(27742666-27742780)
chr3 (1-113)||(52202162-52202276)
chr3 (89-118)||(25911675-25911704)
chr3 (30-121)||(45045268-45045360)
chr3 (137-181)||(50527749-50527793)
[»] chr4 (55 HSPs)
chr4 (1-181)||(22647110-22647291)
chr4 (1-113)||(36954988-36955101)
chr4 (1-113)||(11650944-11651057)
chr4 (1-113)||(40228408-40228521)
chr4 (1-113)||(44745568-44745681)
chr4 (1-113)||(45670027-45670140)
chr4 (1-186)||(6755823-6756009)
chr4 (1-113)||(13233297-13233410)
chr4 (1-113)||(13613070-13613183)
chr4 (1-113)||(36584490-36584603)
chr4 (1-113)||(31581728-31581841)
chr4 (1-113)||(38141535-38141648)
chr4 (6-113)||(18491254-18491362)
chr4 (9-113)||(12700554-12700659)
chr4 (1-113)||(43564485-43564598)
chr4 (9-184)||(44817535-44817711)
chr4 (1-103)||(31664145-31664248)
chr4 (1-113)||(41832443-41832557)
chr4 (1-113)||(54795706-54795820)
chr4 (2-113)||(4632683-4632796)
chr4 (1-113)||(10096321-10096434)
chr4 (1-113)||(16925173-16925286)
chr4 (1-113)||(44134561-44134673)
chr4 (1-113)||(2654888-2655001)
chr4 (1-113)||(19653622-19653735)
chr4 (1-113)||(52581523-52581636)
chr4 (1-115)||(18491365-18491481)
chr4 (1-113)||(13612956-13613070)
chr4 (1-121)||(27270412-27270534)
chr4 (1-113)||(41832557-41832671)
chr4 (1-113)||(44134673-44134787)
chr4 (1-111)||(44745454-44745566)
chr4 (1-113)||(11650830-11650944)
chr4 (1-113)||(12700432-12700546)
chr4 (1-113)||(31664031-31664145)
chr4 (1-113)||(36584603-36584717)
chr4 (1-113)||(36954874-36954988)
chr4 (1-113)||(50767101-50767215)
chr4 (1-113)||(6756009-6756122)
chr4 (1-113)||(10096434-10096547)
chr4 (1-113)||(13233410-13233524)
chr4 (1-113)||(31581614-31581728)
chr4 (1-113)||(38141421-38141535)
chr4 (1-113)||(43564598-43564712)
chr4 (28-113)||(44817442-44817528)
chr4 (5-116)||(7638739-7638851)
chr4 (1-111)||(40228294-40228406)
chr4 (1-112)||(13857680-13857793)
chr4 (1-111)||(13869211-13869323)
chr4 (1-113)||(22647291-22647405)
chr4 (74-108)||(36801913-36801947)
chr4 (74-107)||(10393896-10393929)
chr4 (137-182)||(51001474-51001519)
chr4 (137-181)||(36584423-36584467)
chr4 (137-181)||(40228546-40228590)
[»] chr7 (45 HSPs)
chr7 (1-184)||(26873699-26873883)
chr7 (1-121)||(29075163-29075284)
chr7 (1-113)||(46027747-46027860)
chr7 (1-113)||(22723754-22723867)
chr7 (1-113)||(9624063-9624176)
chr7 (1-109)||(23469374-23469483)
chr7 (1-113)||(44467999-44468112)
chr7 (1-119)||(36675465-36675584)
chr7 (1-113)||(17166933-17167047)
chr7 (1-113)||(31065601-31065714)
chr7 (1-113)||(36358288-36358401)
chr7 (1-113)||(42241907-42242020)
chr7 (1-113)||(31428804-31428917)
chr7 (1-113)||(45350118-45350231)
chr7 (1-113)||(39976388-39976501)
chr7 (1-113)||(43859158-43859271)
chr7 (1-113)||(44724041-44724154)
chr7 (4-113)||(41367726-41367836)
chr7 (1-113)||(44142941-44143055)
chr7 (1-113)||(46027860-46027974)
chr7 (1-113)||(16834255-16834368)
chr7 (1-105)||(40055666-40055771)
chr7 (1-113)||(9624176-9624290)
chr7 (1-113)||(18104296-18104409)
chr7 (28-113)||(44142829-44142915)
chr7 (1-113)||(22723640-22723754)
chr7 (1-113)||(36675351-36675465)
chr7 (1-113)||(40055771-40055885)
chr7 (1-111)||(25174216-25174328)
chr7 (1-113)||(8461766-8461880)
chr7 (1-113)||(23469260-23469374)
chr7 (1-113)||(31065487-31065601)
chr7 (1-113)||(31931888-31932002)
chr7 (1-113)||(36358174-36358288)
chr7 (1-113)||(45350231-45350345)
chr7 (8-112)||(46828821-46828926)
chr7 (1-113)||(17167047-17167161)
chr7 (31-113)||(23562656-23562738)
chr7 (1-113)||(26873883-26873997)
chr7 (1-113)||(43859271-43859385)
chr7 (28-113)||(44723955-44724041)
chr7 (28-108)||(8727794-8727875)
chr7 (1-84)||(29663010-29663095)
chr7 (49-113)||(29075098-29075163)
chr7 (137-181)||(44724178-44724222)
[»] scaffold0014 (4 HSPs)
scaffold0014 (1-113)||(65001-65114)
scaffold0014 (1-113)||(65228-65342)
scaffold0014 (1-113)||(65114-65228)
scaffold0014 (137-181)||(64933-64977)
[»] chr8 (61 HSPs)
chr8 (1-113)||(3886759-3886872)
chr8 (1-113)||(6316944-6317057)
chr8 (1-113)||(28564952-28565065)
chr8 (1-113)||(28572575-28572688)
chr8 (1-121)||(5590152-5590273)
chr8 (1-113)||(22658325-22658438)
chr8 (1-113)||(24797032-24797145)
chr8 (1-113)||(41837933-41838046)
chr8 (1-113)||(42556072-42556185)
chr8 (1-113)||(4231287-4231400)
chr8 (1-113)||(21434907-21435020)
chr8 (1-113)||(2317129-2317242)
chr8 (1-121)||(7012397-7012518)
chr8 (1-113)||(10092322-10092435)
chr8 (1-113)||(36060425-36060538)
chr8 (1-113)||(43117416-43117530)
chr8 (1-113)||(3659801-3659914)
chr8 (2-113)||(9830675-9830787)
chr8 (1-113)||(7413099-7413213)
chr8 (4-113)||(41169879-41169989)
chr8 (1-113)||(1098125-1098238)
chr8 (1-113)||(4697874-4697987)
chr8 (5-113)||(38567197-38567306)
chr8 (29-112)||(25642739-25642823)
chr8 (1-113)||(1183890-1184003)
chr8 (1-113)||(7242614-7242726)
chr8 (1-113)||(4697987-4698101)
chr8 (1-113)||(7242500-7242614)
chr8 (1-113)||(21435020-21435134)
chr8 (1-113)||(42555958-42556072)
chr8 (1-113)||(43117530-43117644)
chr8 (1-113)||(41388073-41388186)
chr8 (4-113)||(2317242-2317353)
chr8 (1-113)||(5590038-5590152)
chr8 (35-116)||(25383051-25383132)
chr8 (1-113)||(28565065-28565179)
chr8 (1-113)||(28572688-28572802)
chr8 (1-113)||(36060538-36060652)
chr8 (1-113)||(41837819-41837933)
chr8 (1-113)||(197270-197384)
chr8 (1-113)||(312107-312221)
chr8 (1-113)||(1184003-1184117)
chr8 (1-113)||(22658211-22658325)
chr8 (28-113)||(38567310-38567396)
chr8 (30-113)||(7422056-7422140)
chr8 (1-113)||(1098238-1098352)
chr8 (1-113)||(3659687-3659801)
chr8 (1-113)||(3886645-3886759)
chr8 (1-113)||(4231400-4231514)
chr8 (1-113)||(7012518-7012632)
chr8 (1-113)||(10092435-10092549)
chr8 (1-121)||(11635819-11635941)
chr8 (1-113)||(41388186-41388300)
chr8 (137-180)||(6316877-6316920)
chr8 (1-105)||(6317065-6317171)
chr8 (1-113)||(41169765-41169879)
chr8 (74-119)||(8996410-8996455)
chr8 (145-185)||(7012333-7012373)
chr8 (137-181)||(9830607-9830651)
chr8 (137-181)||(11635758-11635802)
chr8 (137-181)||(34934371-34934415)
[»] chr2 (51 HSPs)
chr2 (1-113)||(23869730-23869843)
chr2 (1-113)||(26293227-26293340)
chr2 (1-113)||(34983343-34983456)
chr2 (1-113)||(44545707-44545820)
chr2 (1-181)||(2249580-2249761)
chr2 (1-181)||(38763713-38763894)
chr2 (1-121)||(7366210-7366331)
chr2 (1-113)||(28745471-28745583)
chr2 (1-113)||(1021046-1021159)
chr2 (1-113)||(26860640-26860753)
chr2 (1-181)||(13615941-13616122)
chr2 (1-113)||(16194319-16194432)
chr2 (1-113)||(34494453-34494566)
chr2 (1-113)||(36436160-36436273)
chr2 (1-113)||(11935353-11935467)
chr2 (1-181)||(38527173-38527354)
chr2 (1-113)||(1115016-1115129)
chr2 (1-113)||(11764861-11764974)
chr2 (1-113)||(12995033-12995146)
chr2 (1-113)||(42016570-42016683)
chr2 (1-107)||(19283908-19284015)
chr2 (1-113)||(31392614-31392726)
chr2 (1-113)||(1114902-1115016)
chr2 (1-113)||(22674717-22674831)
chr2 (1-113)||(28745357-28745471)
chr2 (31-113)||(43471462-43471545)
chr2 (1-113)||(6749870-6749984)
chr2 (1-113)||(13615827-13615941)
chr2 (1-113)||(36436046-36436160)
chr2 (1-113)||(42016683-42016797)
chr2 (1-181)||(6749984-6750165)
chr2 (1-113)||(11935239-11935353)
chr2 (1-113)||(16194432-16194546)
chr2 (1-113)||(23869843-23869957)
chr2 (1-113)||(26293340-26293454)
chr2 (1-113)||(31392726-31392840)
chr2 (1-113)||(34983456-34983570)
chr2 (30-121)||(3836347-3836439)
chr2 (1-113)||(2249761-2249875)
chr2 (1-113)||(11764974-11765088)
chr2 (44-113)||(38763894-38763964)
chr2 (48-113)||(41699251-41699317)
chr2 (1-113)||(44545593-44545707)
chr2 (1-107)||(7366337-7366445)
chr2 (1-113)||(26860526-26860640)
chr2 (140-182)||(7366149-7366191)
chr2 (1-113)||(3836205-3836317)
chr2 (1-112)||(29035377-29035490)
chr2 (136-181)||(36436296-36436341)
chr2 (29-105)||(38527361-38527438)
chr2 (137-181)||(28745609-28745653)
[»] chr1 (65 HSPs)
chr1 (1-121)||(40428758-40428879)
chr1 (1-113)||(51139753-51139866)
chr1 (1-113)||(8530150-8530263)
chr1 (1-113)||(23177409-23177522)
chr1 (1-113)||(24544695-24544808)
chr1 (1-113)||(33012034-33012147)
chr1 (1-119)||(25299065-25299184)
chr1 (1-181)||(16692926-16693107)
chr1 (1-181)||(24790434-24790615)
chr1 (1-121)||(42372029-42372150)
chr1 (1-181)||(17285271-17285452)
chr1 (1-113)||(919687-919800)
chr1 (1-121)||(8086289-8086410)
chr1 (1-113)||(29170009-29170122)
chr1 (1-113)||(44052436-44052549)
chr1 (1-113)||(44317634-44317747)
chr1 (1-107)||(46224737-46224844)
chr1 (1-113)||(48708394-48708507)
chr1 (1-181)||(37125692-37125873)
chr1 (1-113)||(29981684-29981797)
chr1 (1-104)||(40567042-40567146)
chr1 (1-181)||(6849752-6849933)
chr1 (1-113)||(40567146-40567260)
chr1 (1-113)||(48708280-48708394)
chr1 (1-113)||(9042396-9042508)
chr1 (1-113)||(45836911-45837024)
chr1 (1-113)||(47561794-47561907)
chr1 (1-113)||(8086410-8086524)
chr1 (1-113)||(25298951-25299065)
chr1 (1-113)||(33011920-33012034)
chr1 (1-113)||(42372150-42372264)
chr1 (1-113)||(44052322-44052436)
chr1 (1-113)||(46224623-46224737)
chr1 (1-113)||(24790615-24790730)
chr1 (1-113)||(9246877-9246991)
chr1 (1-113)||(16692812-16692926)
chr1 (1-113)||(37125873-37125987)
chr1 (1-113)||(45837024-45837138)
chr1 (1-113)||(23177522-23177636)
chr1 (1-113)||(24542643-24542757)
chr1 (1-113)||(24542757-24542871)
chr1 (1-113)||(24542871-24542985)
chr1 (1-113)||(24542985-24543099)
chr1 (1-113)||(24543099-24543213)
chr1 (1-113)||(24543213-24543327)
chr1 (1-113)||(24543327-24543441)
chr1 (1-113)||(24543441-24543555)
chr1 (1-113)||(24543555-24543669)
chr1 (1-113)||(24543669-24543783)
chr1 (1-113)||(24543783-24543897)
chr1 (1-113)||(24543897-24544011)
chr1 (1-113)||(24544011-24544125)
chr1 (1-113)||(24544125-24544239)
chr1 (1-113)||(24544239-24544353)
chr1 (1-113)||(24544353-24544467)
chr1 (1-113)||(24544467-24544581)
chr1 (1-113)||(24544581-24544695)
chr1 (1-113)||(40428644-40428758)
chr1 (1-113)||(47561907-47562021)
chr1 (1-113)||(51139866-51139980)
chr1 (28-112)||(21852069-21852154)
chr1 (1-113)||(29981570-29981684)
chr1 (1-116)||(32540570-32540687)
chr1 (137-182)||(8530081-8530126)
chr1 (137-181)||(9247014-9247058)
[»] chr6 (28 HSPs)
chr6 (1-119)||(7021879-7021998)
chr6 (1-181)||(2660816-2660997)
chr6 (1-113)||(9079033-9079146)
chr6 (1-113)||(12698562-12698675)
chr6 (1-113)||(26468516-26468629)
chr6 (1-113)||(15469157-15469270)
chr6 (1-113)||(34023520-34023633)
chr6 (1-104)||(24130222-24130326)
chr6 (1-107)||(11450482-11450589)
chr6 (1-106)||(16461387-16461493)
chr6 (1-113)||(8560493-8560606)
chr6 (1-113)||(24635448-24635561)
chr6 (1-113)||(34127565-34127678)
chr6 (1-113)||(7021998-7022111)
chr6 (1-113)||(2660702-2660816)
chr6 (1-113)||(26468629-26468743)
chr6 (1-113)||(34127678-34127792)
chr6 (1-109)||(11450369-11450478)
chr6 (1-101)||(23259046-23259147)
chr6 (4-113)||(14883142-14883253)
chr6 (1-113)||(23258818-23258932)
chr6 (1-113)||(23258932-23259046)
chr6 (1-113)||(12996466-12996579)
chr6 (1-109)||(12698678-12698788)
chr6 (1-113)||(15469270-15469383)
chr6 (74-113)||(13405415-13405454)
chr6 (30-108)||(31489894-31489973)
chr6 (1-113)||(34023406-34023520)
[»] scaffold0978 (2 HSPs)
scaffold0978 (1-121)||(1163-1284)
scaffold0978 (1-113)||(1284-1398)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-112)||(19114-19226)
scaffold0050 (1-113)||(19226-19340)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-105)||(11253-11358)
scaffold0131 (137-182)||(11165-11210)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-113)||(331839-331952)
scaffold0002 (3-113)||(331952-332064)


Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 327 - 558
Target Start/End: Original strand, 16635631 - 16635862
Alignment:
Q  327 tttaatagccttactcttaaatcggccttaatctttacctttatttttataaaatttgacaaacatgtggtcaagtgacaccttaatcggtatcacaaga 426  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16635631 tttagtagccttactcttaaatcggccttaatctctacctttatttttataaaatttgacaaacatgtggtcaagtgacaccttaatcggtatcacaaga 16635730  T
Q  427 gattttagattagaggacattctaatttatcttttaatttaaagtttaacggtcaaacttatacccattgaagtaggtattgcgagttcaaattattaaa 526  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16635731 gattttagataagaggacattctaatttatcttttaatttaaagtttaacggtcaaacttatacgcattgaagtaggtattgcgagttcaaattattaaa 16635830  T
Q  527 cctgcacttcatacaatttgagttgtatgtat 558  Q
    ||||||||||||||||||||||||||||||||    
T  16635831 cctgcacttcatacaatttgagttgtatgtat 16635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9596143 - 9596256
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||||||| |||||| |||| |||||||||||| |||||||||||||    
T  9596143 aattgaattatttaaatttttgggtgggccactacaccactttgcagaaatttggatcaactaaaatataaaaccgacacaaaattgcataaaatctcgc 9596242  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  9596243 aaaatagacatata 9596256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9737684 - 9737797
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | |||| |||||||||||| |||||||||||||    
T  9737684 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgacacaaaattgcataaaatctcgc 9737783  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  9737784 aaaatagacctata 9737797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43348814 - 43348701
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  43348814 aattgaattatttaaatttttgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 43348715  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  43348714 aaaataaacctata 43348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 43358590 - 43358410
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | |||||||| |||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  43358590 aattgaattatttaaattttcgggtgggtcactacactactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 43358491  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccact 180  Q
    |||||||||||||| || ||||             | ||||||| |||||||||||||||| |||||| ||||||||||||    
T  43358490 aaaatagacctataatcgttgattttttcatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccact 43358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 3631439 - 3631258
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | |||| | |||||||||| |||||||||||||    
T  3631439 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgc 3631340  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  3631339 aaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 3631258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 26525207 - 26525388
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| || ||||||||||    
T  26525207 aattgaattatttaaattttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcaaaaaatctcgc 26525306  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  26525307 aaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15374295 - 15374182
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||| || ||   ||| ||||||||||||||||||||| |||||||||||| | |||| |||||||||||| |||||||||||||    
T  15374295 aattgaattatttaaatttgtgggtggaccattacaccactttgcaagaatttcgatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 15374196  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  15374195 aaaatagacctata 15374182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16823311 - 16823198
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | ||||||||||||||||| |||||| |||||||||||| | |||| |||||||||||| |||||||||||||    
T  16823311 aattgaattatttaaattttcgggtgggtcactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 16823212  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  16823211 aaaatagacctata 16823198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30773059 - 30772946
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||| ||||||||||| | |||| ||| |||||||| |||||||||| ||    
T  30773059 aattgaattatttaaatttttgggtgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgc 30772960  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  30772959 aaaatagacctata 30772946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32304630 - 32304743
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||| |||||||| ||  |||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  32304630 aattgaattatttcaatttttgggtgggccaatacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgt 32304729  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  32304730 aaaatagacttata 32304743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 7440460 - 7440571
Alignment:
Q  3 ttgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaa 101  Q
    |||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||||    
T  7440460 ttgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaa 7440559  T
Q  102 aatagacctata 113  Q
    |||||| |||||    
T  7440560 aatagatctata 7440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25701398 - 25701511
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||| |||||||||||| | |||| ||| ||||||||||||||||||| ||    
T  25701398 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattacataaaatcttgc 25701497  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  25701498 aaaatagatctata 25701511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29390449 - 29390336
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| ||||||||||||     
T  29390449 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgt 29390350  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  29390349 aaaatacacctata 29390336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 8074216 - 8074329
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||   ||||||||| |||||||  |||||||||||||||||||   |||| ||||||||||||  ||||||||||||    
T  8074216 aattgaattatttaaatttttgggtggaccactacactactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgc 8074315  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  8074316 aaaatagacctata 8074329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 5844285 - 5844173
Alignment:
Q  2 attgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgca 100  Q
    ||||||||||||||||||| | ||  ||||| |||||| ||||||| |||||||||||||||||| | |||| |||||| ||||| |||||||||| | |    
T  5844285 attgaattatttaaattttcgggtgggccaccacaccattttgcaataatttggatcaaccaaaacataaaatcgacaccaaattgcataaaatctagta 5844186  T
Q  101 aaatagacctata 113  Q
    |||||||||||||    
T  5844185 aaatagacctata 5844173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7440344 - 7440460
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||| |||| | ||  |||||||||||| |||||| |||||||||||||||||||   |||| ||||| ||||||  |||||||||||    
T  7440344 aattgaattatttaaaattttcgggtgggccactacaccaatttgcaggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 7440443  T
Q  99 caaaatagacctatagt 115  Q
    |||||||||||||||||    
T  7440444 caaaatagacctatagt 7440460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 3631553 - 3631439
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  |||||||||||    
T  3631553 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacttaaaatcgacataaaattgtataaaatctcg 3631454  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  3631453 caaaatagacctata 3631439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 16635484 - 16635574
Alignment:
Q  182 tatgtcggggtcggcccaataatcttcaaaaacaagtcaggtttaaaacaaattttgttgtatgacctttttcatttgcatgaagcatttt 272  Q
    |||||||||||||| ||||||||||| ||||| |||| || ||||||| |||||||| | || ||||||||| ||||||||||||||||||    
T  16635484 tatgtcggggtcggtccaataatctttaaaaataagttagatttaaaagaaattttgatatacgacctttttaatttgcatgaagcatttt 16635574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26296985 - 26297099
Alignment:
Q  1 aattgaattatttaaat-ttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||| |||||  |  ||||||||||||||||||  |||||||||||||||||||   |||| ||||||||||||| |||| |||| |    
T  26296985 aattgaattatttaaatattttggatgggccactacaccactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattatataagatcttg 26297084  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  26297085 caaaatagacctata 26297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 13013232 - 13013413
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  | |||||||||  |||| |  |||||||||||||||||| | ||||| || |||||||| | |||||||||||    
T  13013232 aattgaattatttaaattttcgagtgggacactacacctttttgtagaaatttggatcaaccaaaacataaaactgatacaaaattgcttaaaatctcgc 13013331  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||| |||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  13013332 aaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 13013413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19577157 - 19577271
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaataca-aaacgacacaaaattacataaaatctcg 98  Q
    |||| |||||||||||||||| ||||  ||||||||||||||||||  ||||||||||||||||||||  | || ||||||||||||  ||||||| | |    
T  19577157 aattaaattatttaaatttttcgagtgggccactacaccactttgcgggaatttggatcaaccaaaatctagaaccgacacaaaattgtataaaatgttg 19577256  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  19577257 caaaatagatctata 19577271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41084558 - 41084672
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  ||||||||||||||||||   |||||||||||| |||||   |||| ||||||||||||  |||||||||||    
T  41084558 aattgaattatttaaattttttggatgggccactacaccactttgcggaaatttggatcaatcaaaacctaaaatcgacacaaaattctataaaatctcg 41084657  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  41084658 caaaatagacctata 41084672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10925689 - 10925576
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||   |||||||||||||||| | ||||||| |||||| |||| | ||||| || ||||||||||||||||||||||    
T  10925689 aattgaattatttaaattttcaggtggaccactacaccactttgtaggaatttgaatcaactaaaacataaaaccgatacaaaattacataaaatctcgc 10925590  T
Q  100 aaaatagacctata 113  Q
    ||| ||||| ||||    
T  10925589 aaattagacatata 10925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41817634 - 41817525
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||||  |||||||||||||||||||  ||||| ||||| |||||  ||||||| |||    
T  41817634 aattgaattatttaaatttttcgggtgggccactacaccactttgcagaaatttggatcaaccaaaatctaaaactgacactaaattgtataaaatatcg 41817535  T
Q  99 caaaatagac 108  Q
    |||| |||||    
T  41817534 caaagtagac 41817525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26785124 - 26785008
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||| |||| |||| ||||||||||||| |||||  ||||||||||||||  |||   ||||| |||| ||||||  ||||||||||     
T  26785124 aattgaattatttaaacttttcgagtgagccactacaccaatttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctca 26785025  T
Q  99 caaaatagacctatagt 115  Q
    |||||||||||||||||    
T  26785024 caaaatagacctatagt 26785008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32304516 - 32304630
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||| |  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  32304516 aattgaattatttaaatttttcgggtgggccactacaccaatttccgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 32304615  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  32304616 caaaatagacctata 32304630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43348928 - 43348814
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  43348928 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcg 43348829  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  43348828 caaaatagacctata 43348814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13084620 - 13084733
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | |||| ||||  |||| |  |||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  13084620 aattgaattatttaaattttcgggtgggacactgcacctttttgtagaaatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgc 13084719  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  13084720 aaattagacctata 13084733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20487153 - 20487040
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||| |||||||||||  | | |||||||||||||||||||| |||||||||||| || |||   |||| ||||||||||||  ||||||||| |    
T  20487153 aattgaattttttaaatttttcggatgagccactacaccactttgcaggaatttggatcagccgaaacctaaaaccgacacaaaattgtataaaatcttg 20487054  T
Q  99 caaaatagacctat 112  Q
    ||||||| ||||||    
T  20487053 caaaatatacctat 20487040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16823425 - 16823311
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||| | |||||||||||    
T  16823425 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcatataaaatctcg 16823326  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  16823325 caaaatagatctata 16823311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 20656834 - 20656948
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  |   | ||||||||||| |||||   |||||||||||||||||| | ||||| || |||||||| ||||||||||||    
T  20656834 aattgaattatttaaatttttcggatggaccactacaccaatttgcggaaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcg 20656933  T
Q  99 caaaatagacctata 113  Q
     ||| ||||||||||    
T  20656934 taaattagacctata 20656948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26525093 - 26525207
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaac-caaaatacaaaacgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||  |||    ||| ||||| ||||||  |||||||||||    
T  26525093 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaactgaaaccttaaaccgacataaaattgtataaaatctcg 26525192  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  26525193 caaaatagacctata 26525207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30773173 - 30773059
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  30773173 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 30773074  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  30773073 caaaatagatctata 30773059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43358704 - 43358590
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||  ||   ||||| |||| ||||||  |||||||||||    
T  43358704 aattgaattatttaaattttttgggtgggccactacaccaatttgcgggaatttggatcaaccgtaacctaaaacagacataaaattgtataaaatctcg 43358605  T
Q  99 caaaatagacctata 113  Q
    ||||||| |||||||    
T  43358604 caaaataaacctata 43358590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9596029 - 9596143
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaac-caaaatacaaaacgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||| ||||||| |||||| ||||    ||| ||||| ||||||  ||||||||||     
T  9596029 aattgaattatttaaatttttcgggtgggccactacaccaatttgcaggaatttgaatcaacacaaacctaaaaccgacataaaattgtataaaatctca 9596128  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  9596129 caaaatagatctata 9596143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8074102 - 8074210
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  ||||||||||||||||||  ||||||| ||||||| |||   |||| |||||  |||||  |||||||||||    
T  8074102 aattgaattatttaaatttttcggatgggccactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacattaaattgtataaaatctcg 8074201  T
Q  99 caaaataga 107  Q
    |||||||||    
T  8074202 caaaataga 8074210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15374394 - 15374332
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaacc 62  Q
    ||||||||||||||||||||| |||  | ||||||||||| |||||  |||||||||||||||    
T  15374394 aattgaattatttaaatttttcagttgggccactacaccaatttgcgggaatttggatcaacc 15374332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 32379625 - 32379670
Alignment:
Q  136 tgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||||||||||||||||||||| |||  ||| |||||||||||    
T  32379625 tgggtgggtcgtggcccacctcagcccatataagcctccgccactg 32379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 9737821 - 9737865
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  9737821 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 9737865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 19577294 - 19577338
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| |||||||||||| ||| |||||| |||||||||||||    
T  19577294 gggtgggccgtggcccaccttagcccatgaagggctccgccactg 19577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 26784955 - 26784911
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| |||||||||||| ||| |||||| |||||||||||||    
T  26784955 gggtgggccgtggcccacctaagcccatgaagggctccgccactg 26784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 11232133 - 11232252
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  11232133 aattgaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 11232232  T
Q  100 aaaatagacctatagtcatt 119  Q
    |||||||||||||| |||||    
T  11232233 aaaatagacctataatcatt 11232252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32270898 - 32271006
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  32270898 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgc 32270997  T
Q  100 aaaatagac 108  Q
    |||||||||    
T  32270998 aaaatagac 32271006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12251486 - 12251599
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||| |||||||||| |    
T  12251486 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattatataaaatctcac 12251585  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  12251586 aaaatagacctata 12251599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22729400 - 22729279
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||| ||||||||||||     
T  22729400 aattgaattatttaaattttggggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcga 22729301  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  22729300 aaaatagacctatagtcgttga 22729279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 29126022 - 29126204
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  ||||||||||||||||||| |||||| |||||||||||| | ||||| ||||||||||| |||||||||||||    
T  29126022 aattgaattatttaaattttcggatgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 29126121  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactgt 182  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  29126122 aaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgt 29126204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 52571403 - 52571584
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||| | |||| ||| |||||||| |||||||| ||||    
T  52571403 aattgaattatttaaatttttgagtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgc 52571502  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||| |||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  52571503 aaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 52571584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1092856 - 1092977
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||||||| || ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  1092856 aattgaattatttaaattttcgggtgggccactacaccactttacaggaatttggatcaaccaaaacataaaacccacacaaaattgcataaaatctcgc 1092955  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||| ||||||| ||||    
T  1092956 aaaatagacttatagtcgttga 1092977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 27742666 - 27742553
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  || |||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||| ||||||||||| |    
T  27742666 aattgaattatttaaattttcggataggccactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctctc 27742567  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  27742566 aaaatagacctata 27742553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 28952370 - 28952479
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||| |||||||| |||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  28952370 aattgaattatttaaattttcgggtgggccactacacccctttgcaaaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 28952469  T
Q  100 aaaatagacc 109  Q
    ||||||||||    
T  28952470 aaaatagacc 28952479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44254579 - 44254700
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||||| |||||||||||||    
T  44254579 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 44254678  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||  |||| |||||||    
T  44254679 aaaatagatatataatcattga 44254700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 52202162 - 52202049
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  | |||||||||||||||||  |||||||||||||||||| | |||| ||||||||||||  ||||||||||||    
T  52202162 aattgaattatttaaatttttgggtgggtcactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgc 52202063  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  52202062 aaaatagacctata 52202049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44205593 - 44205479
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacac-aaaattacataaaatctcg 98  Q
    |||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||||||| | | |||| |||||| |||||| ||||||||||||    
T  44205593 aattgaattatttaaattttcgggtgagccactacatcactttgcaagaatttggatcaaccaacacataaaaccgacacaaaaattgcataaaatctcg 44205494  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  44205493 caaaatagatctata 44205479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 7160268 - 7160450
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||| |||| |||   ||||| ||||||||||||||||||||||||    
T  7160268 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggattaaccgaaacctaaaactgacacaaaattacataaaatctcg 7160367  T
Q  99 caaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||||||||||| || ||||             | ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  7160368 caaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaaaggctccgccactg 7160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 18163898 - 18163717
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   | |||||||||||||||| ||||||||||||||||||| | |||| ||| ||||||||  ||||||||||||    
T  18163898 aattgaattatttaaattttcgggtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgaataaaatctcgc 18163799  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  18163798 aaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 18163717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 36633667 - 36633486
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||| ||||||||||||||| ||||||||||||||||||| | |||| ||| ||||||||  |||||||||| |    
T  36633667 aattgaattatttaaattttcgggtgggccgctacaccactttgcaggaatttggatcaaccaaaacataaaatcgatacaaaattgtataaaatctcac 36633568  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | || |||||||||||||||| |||| |||||| |||||||||||||    
T  36633567 aaaatagacctataatcgttgattttttaatttttccggatgggtcgtggcccaccccagcccatgaagggctccgccactg 36633486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13594852 - 13594965
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||| |||| |||||| | |||| |||||||||||| |||||||||||||    
T  13594852 aattgaattatttaaattttcgggtgggccactacaccactttgtaggaatttgaatcagccaaaacataaaaccgacacaaaattgcataaaatctcgc 13594951  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  13594952 aaaatagatctata 13594965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21259413 - 21259526
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||    ||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||||| ||||||||||| |    
T  21259413 aattgaattatttaaattttcgggtggatcactacaccactttgcaggaatttgaatcaaccaaaacataaaatcgacacaaaattgcataaaatctcac 21259512  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  21259513 aaaatagacctata 21259526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50527612 - 50527725
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |   |||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  50527612 aattgaattatttaaattttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 50527711  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  50527712 aaaatagaactata 50527725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35083973 - 35083854
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||| |||| | ||   ||||||||||||||| || ||||||||||||||||||| | ||||| ||||||||||| ||||||||||||     
T  35083973 aattgaattatttaacttttcgggtggaccactacaccactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgt 35083874  T
Q  100 aaaatagacctatagtcatt 119  Q
    ||||| |||||||| |||||    
T  35083873 aaaattgacctataatcatt 35083854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 49169973 - 49169792
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||| ||||||||||||||  |||| ||||||||||||| | |||| ||||||||||||  ||||||| ||||    
T  49169973 aattgaattatttaaattttcgggtgggccattacaccactttgcagaaattcggatcaaccaaaacataaaaccgacacaaaattgtataaaatttcgc 49169874  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             |||||||||| |||||||||| |||| ||| || |||||||||||||    
T  49169873 aaaatagacctataatcgttgatttttttacttttctgggtgggttgtggcccaccccagcccataaagggctccgccactg 49169792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13594738 - 13594852
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| ||| | ||||| |||| ||||||  |||||||||||    
T  13594738 aattgaattatttaaatttttcgggttggccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaattgtataaaatctcg 13594837  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  13594838 caaaatagacctata 13594852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 49657190 - 49657311
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||   |||||||||||||||||| ||||||||||||||||||| | |||| ||||  |||||| |||||||| ||      
T  49657190 aattgaattatttaaattttcaggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacgtaaaattgcataaaatttcaa 49657289  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  49657290 aaaatagacctatagtcgttga 49657311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32270783 - 32270898
Alignment:
Q  1 aattgaattatttaaattttt--gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctc 97  Q
    |||||||||||||||||||||  | ||  |||||||||||| |||||| ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||    
T  32270783 aattgaattatttaaatttttcggggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctc 32270882  T
Q  98 gcaaaatagacctata 113  Q
    ||||||||||||||||    
T  32270883 gcaaaatagacctata 32270898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 34660898 - 34660814
Alignment:
Q  29 ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctat 112  Q
    ||||||||||||||||||| ||||||||||| ||||||   ||||| |||||||||||| ||||||||||| |||||||||||||    
T  34660898 ccactacaccactttgcaaaaatttggatcagccaaaacctaaaaccgacacaaaattatataaaatctcgtaaaatagacctat 34660814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11232019 - 11232133
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  11232019 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 11232118  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  11232119 caaaatagacctata 11232133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44254465 - 44254579
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  44254465 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 44254564  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  44254565 caaaatagacctata 44254579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50527498 - 50527612
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| ||||| |||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  50527498 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 50527597  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  50527598 caaaatagacctata 50527612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16908797 - 16908862
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaa 66  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||||||||    
T  16908797 aattgaattatttaaatttttgggtgggccactacaccactttgctggaatttggatcaaccaaaa 16908862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 12251374 - 12251486
Alignment:
Q  3 ttgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgca 100  Q
    ||||||||||||||||||| ||||  |||| ||||||| |||||  ||||||||||||||| ||||  |||| ||||| ||||||  ||||| |||||||    
T  12251374 ttgaattatttaaatttttcgagtgggccattacaccaatttgctggaatttggatcaaccgaaatctaaaatcgacataaaattgtataaattctcgca 12251473  T
Q  101 aaatagacctata 113  Q
    |||||||||||||    
T  12251474 aaatagacctata 12251486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25246202 - 25246316
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaa--tacaaaacgacacaaaattacataaaatctc 97  Q
    ||||||||||||||||||||| | |||  ||||||||||| |||||  ||||||||||||||| |||  || |||| |||| ||||||  ||||||||||    
T  25246202 aattgaattatttaaatttttcgggtagaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaaa-gacataaaattgtataaaatctc 25246300  T
Q  98 gcaaaatagacctata 113  Q
    ||||||||||||||||    
T  25246301 gcaaaatagacctata 25246316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28952256 - 28952367
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  28952256 aattgaattatttaaattttttgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 28952355  T
Q  99 caaaatagacct 110  Q
    ||||||||||||    
T  28952356 caaaatagacct 28952367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22729514 - 22729400
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  22729514 aattgaattatttaaatttttcggttggtccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 22729415  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  22729414 caaaatagacctata 22729400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31174537 - 31174639
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | | | ||||||||||||||||| ||||||||||||||||||||   |||| ||||||||||||  ||||||| |||    
T  31174537 aattgaattatttaaatttttcggatgaaccactacaccactttgctagaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatatcg 31174636  T
Q  99 caa 101  Q
    |||    
T  31174637 caa 31174639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 49657076 - 49657190
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  49657076 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 49657175  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  49657176 caaaatagatctata 49657190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 36633752 - 36633667
Alignment:
Q  29 ccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||||||| |||||| ||||||||||||||| ||||  |||| ||||| ||||||  |||| |||||||||||||||||||||    
T  36633752 ccactacaccaatttgcaggaatttggatcaaccgaaatctaaaaccgacataaaattgtataatatctcgcaaaatagacctata 36633667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45045503 - 45045390
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||| |||||||| ||   |||||||||||||||||| |||||||||| || | |||   |||| | ||| ||||||  ||||||||||||    
T  45045503 aattgaattatttgaatttttgggtggaccactacaccactttgcaggaatttggattaatcgaaacctaaaaccaacataaaattgtataaaatctcgc 45045404  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  45045403 aaaatagacctata 45045390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4618329 - 4618218
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacgacacaaaattacataaaatctcgca 100  Q
    |||||||||||||||||||| | ||   ||||||||| |||||| |||| ||||||||||| ||||   ||| ||||||||||||  ||||||||| |||    
T  4618329 aattgaattatttaaattttcgggtggaccactacac-actttgaaagagtttggatcaacaaaaaataaaaccgacacaaaattgtataaaatcttgca 4618231  T
Q  101 aaatagacctata 113  Q
    ||||||| |||||    
T  4618230 aaatagatctata 4618218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 25246343 - 25246386
Alignment:
Q  138 ggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  25246343 ggtgggtcgtggcccaccccagctcatgaaaggctccgccactg 25246386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1092742 - 1092856
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||  ||||||  |||||||||||    
T  1092742 aattgaattatttaaatttttcgcgtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcg 1092841  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  1092842 caaaatagatctata 1092856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16908683 - 16908797
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||| | |||   ||||| |||| ||||||  ||||||||| |    
T  16908683 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctag 16908782  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  16908783 caaaatagacctata 16908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21259185 - 21259299
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| ||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||| ||||||||| |    
T  21259185 aattgaattatttaaatttttcggatgggccattacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctag 21259284  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  21259285 caaaatagacctata 21259299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21259299 - 21259413
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| ||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||| ||||||||| |    
T  21259299 aattgaattatttaaatttttcggatgggccattacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctag 21259398  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  21259399 caaaatagacctata 21259413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29125908 - 29126022
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  29125908 aattgaattatttaaatttttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcg 29126007  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  29126008 caaaatagacctata 29126022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 35084087 - 35083973
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||| || |||||  ||||||||||||||| |||   ||||| | || ||||||  |||||||||||    
T  35084087 aattgaattatttaaatttttcgggtgggccactacatcaatttgcgggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcg 35083988  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  35083987 caaaatagacctata 35083973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 27742780 - 27742666
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaa--tacaaaacgacacaaaattacataaaatctc 97  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||| |  ||||| ||||||||| |||  || ||||||||| ||||||  |||||||||     
T  27742780 aattgaattatttaaatttttcgggtgggccactacaccaatttacgggaattgggatcaaccgaaaccta-aaaacgacataaaattgtataaaatctt 27742682  T
Q  98 gcaaaatagacctata 113  Q
    ||||||||||||||||    
T  27742681 gcaaaatagacctata 27742666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 52202276 - 52202162
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||  ||||| ||||||||  |||   |||| ||||| ||||||  |||||||||||    
T  52202276 aattgaattatttaaattttttgagtgggccactacaccaatttgcgggaattgggatcaactgaaacctaaaaccgacataaaattgtataaaatctcg 52202177  T
Q  99 caaaatagacctata 113  Q
     |||||||| |||||    
T  52202176 taaaatagatctata 52202162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 25911675 - 25911704
Alignment:
Q  89 taaaatctcgcaaaatagacctatagtcat 118  Q
    ||||||||||||||||||||||||||||||    
T  25911675 taaaatctcgcaaaatagacctatagtcat 25911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 45045360 - 45045268
Alignment:
Q  30 cactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgcaaaatagacctatagtcattga 121  Q
    |||||||| | |||||  ||||||||||||||| ||||  ||||| | || |||||||  ||||||||||||||||| | ||||| |||||||    
T  45045360 cactacactagtttgcgggaatttggatcaaccgaaatctaaaaccaacaaaaaattatttaaaatctcgcaaaataaatctataatcattga 45045268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 50527749 - 50527793
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  50527749 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 50527793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 22647291 - 22647110
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacgacacaaaattacataaaatctcgc- 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||     
T  22647291 aattgaattatttaaatttttgggtgggccactacaccactttgcatgaatttggatcaacaaaaatataaaacgacacaaaattgcataaaatctcgca 22647192  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||| | |||||||||| ||||             |||| |||| |||||||||||||||| |||||| |||||||||||||    
T  22647191 aaaaaaaacctatagtcgttgatttttttatttttctggatgggccgtggcccacctcagcccatgaagggctccgccactg 22647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36954988 - 36955101
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  36954988 aattgaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 36955087  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  36955088 aaaatagacctata 36955101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11650944 - 11651057
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  11650944 aattgaattatttaaattttcgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 11651043  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  11651044 aaaatagacctata 11651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40228408 - 40228521
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||||||||  | |||| |||||||||||| |||||||||||||    
T  40228408 aattgaattatttaaattttcgagtgggccactacaacactttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgc 40228507  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  40228508 aaaatagacctata 40228521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44745568 - 44745681
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  |||||| |||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||| ||    
T  44745568 aattgaattatttaaattttcgagtgggccactgcaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgc 44745667  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  44745668 aaaatagacctata 44745681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45670140 - 45670027
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  45670140 aattgaattatttaaattttcgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattacataaaatctcgc 45670041  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  45670040 aaaataaacctata 45670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 6756009 - 6755823
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaata-caaaacgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| |  ||||| |||||||||| |||||||||||||    
T  6756009 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaacaacacaaaattgcataaaatctcgc 6755910  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactgtatgt 186  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| ||||||||||||| ||||    
T  6755909 aaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactggatgt 6755823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13233410 - 13233297
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||| ||||    
T  13233410 aattgaattatttaaatttttgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgc 13233311  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  13233310 aaaatagatctata 13233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13613070 - 13613183
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||||| ||  ||||| ||||||||||| | ||||||||||||||||||||| |||| | |||||||||| |||||||||||||    
T  13613070 aattaaattatttaaatttttgggtgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgc 13613169  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  13613170 aaaatagacctata 13613183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36584603 - 36584490
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||||  |||||||||| |||||||||||||    
T  36584603 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaactaacacaaaattgcataaaatctcgc 36584504  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  36584503 aaaatatacctata 36584490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31581728 - 31581841
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  |||| ||||| ||||| || ||||||||||||||||||| | |||| |||||||||||| |||||||||| ||    
T  31581728 aattgaattatttaaattttcgagtgggccattacactactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctagc 31581827  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  31581828 aaaatagacctata 31581841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 38141535 - 38141648
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | ||||  || |||||||| |||||||||||||    
T  38141535 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaattgatacaaaattgcataaaatctcgc 38141634  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  38141635 aaaatagacctata 38141648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 18491362 - 18491254
Alignment:
Q  6 aattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaat 104  Q
    ||||||||||||||| | ||  | ||||||||||||||||| ||||||||||||||||||| | |||| ||||| |||||||||||||||||| ||||||    
T  18491362 aattatttaaattttcgggtggggcactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattacataaaatctcacaaaat 18491263  T
Q  105 agacctata 113  Q
    |||||||||    
T  18491262 agacctata 18491254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 12700554 - 12700659
Alignment:
Q  9 tatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaataga 107  Q
    |||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||| |||||||||||| |    
T  12700554 tatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaagtctcgcaaaataaa 12700653  T
Q  108 cctata 113  Q
    ||||||    
T  12700654 cctata 12700659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43564598 - 43564485
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |  | ||||||| ||||||||| ||||||||||||||||||| | ||||| | ||||||||| |||||||| ||||    
T  43564598 aattgaattatttaaatttttggatggggcactacaacactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatatcgc 43564499  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  43564498 aaaatagacctata 43564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 44817535 - 44817711
Alignment:
Q  9 tatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaataga 107  Q
    ||||||||||||||  |  ||||||| |||||||||||  |||||||||||||||||| | ||||| ||||||||||| |||||||| ||| ||||||||    
T  44817535 tatttaaatttttggatgggccactataccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatttcgaaaaataga 44817634  T
Q  108 cctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactgtat 184  Q
    ||||||||| ||||             | ||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  44817635 cctatagtcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgtat 44817711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31664145 - 31664248
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||  | |||| |||| ||||||| |||||||||||||    
T  31664145 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgactcaaaattgcataaaatctcgc 31664244  T
Q  100 aaaa 103  Q
    ||||    
T  31664245 aaaa 31664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41832557 - 41832443
Alignment:
Q  1 aattgaattatttaaat-ttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||  ||||| ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||| |||||| |||||||||| |    
T  41832557 aattgaattatttaaaagttttgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattgcataaaatcttg 41832458  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  41832457 caaaatagacatata 41832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 54795706 - 54795820
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||||||||||||  ||||||||||||| ||||||  |||| ||||||||||||  ||||||||| |    
T  54795706 aattgaattatttaaattttttgggtgggccactacaccactttgcgggaatttggatcaatcaaaatctaaaaccgacacaaaattgtataaaatcttg 54795805  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  54795806 caaaatagacctata 54795820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 4632683 - 4632796
Alignment:
Q  2 attgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | || |||||||||||||||||||  ||||||||||||||| ||||  |||||  ||||||||||  ||||||||||||    
T  4632683 attgaattatttaaatttttcgcgtgagccactacaccactttgcgggaatttggatcaaccgaaatctaaaactaacacaaaattgtataaaatctcgc 4632782  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  4632783 aaaatagacttata 4632796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10096321 - 10096434
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaa-ccaaaatacaaaacgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  |||||||||||| |||||| ||||||||||||| | ||| |  ||| ||||| ||||||  ||||||||||||    
T  10096321 aattgaattatttaaattttcgagtgggccactacaccattttgcaggaatttggatcaatcgaaacttaaaaccgacataaaattgtataaaatctcgc 10096420  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  10096421 aaaatagacctata 10096434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16925286 - 16925173
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||| | ||||||||||||||||||| | |||| ||| |||||||| |||||| ||||||    
T  16925286 aattgaattatttaaattttcgggtggaccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaagtctcgc 16925187  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  16925186 aaattagacctata 16925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44134673 - 44134561
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacgacacaaaattacataaaatctcgca 100  Q
    |||||||||||||||||||| | ||    ||||||||||||||||| ||||||||||||||||||| | ||||| |   |||||| ||||||||||| ||    
T  44134673 aattgaattatttaaattttcgggtggatcactacaccactttgcaggaatttggatcaaccaaaacataaaaccaataaaaattgcataaaatctcaca 44134574  T
Q  101 aaatagacctata 113  Q
    |||||||||||||    
T  44134573 aaatagacctata 44134561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2654888 - 2655001
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||| |||||||||||| |  |  | ||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  2654888 aattgaactatttaaattttcggatgggtcactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 2654987  T
Q  100 aaaatagacctata 113  Q
    ||| |||| |||||    
T  2654988 aaactagatctata 2655001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19653622 - 19653735
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||  |||  |||| ||||| | ||| || ||||||||||||||||||| | |||| |||||||||||| ||||||||||  |    
T  19653622 aattgaattatttaaattttcaagtgggccattacactattttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaac 19653721  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  19653722 aaaatagacctata 19653735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 52581636 - 52581523
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaata-caaaacgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |  || |||||||||||||||| |||||||||||||| |||| |  ||| |||||||||| | |||||||| | ||    
T  52581636 aattgaattatttaaatttttggatgggcgactacaccactttgcaggaatttggatcaactaaaacatgaaaccgacacaaaactccataaaatattgc 52581537  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  52581536 aaaatagacctata 52581523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18491481 - 18491365
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  18491481 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 18491382  T
Q  99 caaaatagacctatagt 115  Q
    |||||||||||||||||    
T  18491381 caaaatagacctatagt 18491365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13612956 - 13613070
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  |||||||||||    
T  13612956 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 13613055  T
Q  99 caaaatagacctata 113  Q
     ||||||||||||||    
T  13613056 gaaaatagacctata 13613070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27270534 - 27270412
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||||||| |  |||||| |||||| |||||   ||||| |||||||||||  |||||||||||    
T  27270534 aattgaattatttaaattttttgggtgggccactacaccactttacgggaattttgatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcg 27270435  T
Q  99 caaaatagacctatagtcattga 121  Q
    |||||||||| |||| |||||||    
T  27270434 caaaatagacttataatcattga 27270412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41832671 - 41832557
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||||| |||||| ||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  41832671 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgagaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 41832572  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  41832571 caaaatagacctata 41832557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44134787 - 44134673
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  |||||||||| | |||||  |||||||||||||||||||   ||||| |||| ||||||  |||||||||||    
T  44134787 aattgaattatttaaatttttcaggtgggccactacactaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 44134688  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  44134687 caaaatagacctata 44134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44745454 - 44745566
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| ||||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  44745454 aattgaattatttaaattttttgagtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 44745553  T
Q  99 caaaatagaccta 111  Q
    |||||||||||||    
T  44745554 caaaatagaccta 44745566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11650830 - 11650944
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  ||||||||||     
T  11650830 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcc 11650929  T
Q  99 caaaatagacctata 113  Q
    ||||||| |||||||    
T  11650930 caaaataaacctata 11650944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12700432 - 12700546
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | | | ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  12700432 aattgaattatttaaatttttcggatgaaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 12700531  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  12700532 caaaatagacctata 12700546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31664031 - 31664145
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||| |    
T  31664031 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattttataaaatcttg 31664130  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  31664131 caaaatagacctata 31664145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36584717 - 36584603
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||| ||||||||||||| | || ||||||||||||| || ||  |||||||||||||| ||||   ||||| |||| ||||||  |||||||||||    
T  36584717 aattgaaatatttaaatttttcgggtgagccactacaccaattagcgggaatttggatcaactaaaacttaaaaccgacataaaattgtataaaatctcg 36584618  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  36584617 caaaatagacctata 36584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36954874 - 36954988
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  | ||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  36954874 aattgaattatttaaatttttcgggtgggccactacaccaatttgcggggatttggatcaaccgaaacgtaaaatcgacataaaattgtataaaatctcg 36954973  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  36954974 caaaatagacctata 36954988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 50767215 - 50767101
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||| |||||||||| | ||  ||||||||||||||||||   |||||||||||| |||||   ||||| |||| ||||||  |||||||||||    
T  50767215 aattgaattaattaaattttttgggtgggccactacaccactttgcggaaatttggatcaatcaaaacctaaaaccgacataaaattgtataaaatctcg 50767116  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  50767115 caaaatagacctata 50767101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6756122 - 6756009
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||| ||||||||||||  |   |||||||||||| |||||  ||||||||||||||| ||| | ||||| |||| |||||   ||||||||||||    
T  6756122 aattgaatcatttaaatttttcgggtggccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaatagtataaaatctcgc 6756023  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  6756022 aaaatagacctata 6756009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10096434 - 10096547
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  | ||||||||||||||||   |||||||||||||| |||   ||||| |||||||||||| |||||||||||    
T  10096434 aattgaattatttaaattttttgaatg-gacactacaccactttgcggaaatttggatcaaccgaaacttaaaaccgacacaaaattatataaaatctcg 10096532  T
Q  99 caaaatagacctata 113  Q
    ||||||  |||||||    
T  10096533 caaaatgaacctata 10096547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13233524 - 13233410
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||  |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  13233524 aattgaattatttaaatttttcgggtggaccactacaccgatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 13233425  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  13233424 caaaatagacctata 13233410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31581614 - 31581728
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||| ||||||||||||||  | | ||||| ||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  31581614 aattgagttatttaaatttttcggatgagccagtacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 31581713  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  31581714 caaaatagacctata 31581728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 38141421 - 38141535
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||     
T  38141421 aattgaattatttaaatttttcggttgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 38141520  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  38141521 caaaatagacctata 38141535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43564712 - 43564598
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  43564712 aattgaattatttaaatttttcgggtgttccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 43564613  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  43564612 caaaatagacttata 43564598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 44817442 - 44817528
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||| |||||| ||||||||||||| | ||||  |||| ||||| ||||||  ||||||||||||| ||||||||||||    
T  44817442 gccactacaccaatttgcaggaatttggatcaatcgaaatctaaaaccgacataaaattgtataaaatctcgcagaatagacctata 44817528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 7638739 - 7638851
Alignment:
Q  5 gaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaa 103  Q
    |||||||| ||||||| | ||  |||||||||||||||||| ||||||||| ||| || |||   |||| ||||||||||||  ||||||||| ||||||    
T  7638739 gaattattaaaattttcgggtgggccactacaccactttgcgagaatttgggtcagccgaaacgtaaaatcgacacaaaattgtataaaatcttgcaaaa 7638838  T
Q  104 tagacctatagtc 116  Q
    ||||  |||||||    
T  7638839 tagatttatagtc 7638851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40228294 - 40228406
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||| || ||||| |||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  40228294 aattgaattatttaaatttttcgggtgggccactacaacaatttgcgagaatttggatcaaccgaaacctaaaactgacataaaatcgtataaaatctcg 40228393  T
Q  99 caaaatagaccta 111  Q
    | |||||||||||    
T  40228394 ccaaatagaccta 40228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 13857793 - 13857680
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaacc-aaaatacaaaacgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||||||| ||  ||||||||||| || ||| |  ||| | ||||||||||  ||||||||||     
T  13857793 aattgaattatttaaatttttcgggtgggccactacaccactttacagaaatttggatcagccgaaacttaaaaccaacacaaaattgtataaaatctca 13857694  T
Q  99 caaaatagacctat 112  Q
    ||||||| ||||||    
T  13857693 caaaatacacctat 13857680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13869323 - 13869211
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||| || |||||||||  ||||||||||| || |||   ||||| |||||||||| | ||||||||||     
T  13869323 aattgaattatttaaatttttcgggtggaccactgcatcactttgcagaaatttggatcagccgaaacctaaaaccgacacaaaatgatataaaatctca 13869224  T
Q  99 caaaatagaccta 111  Q
    |||||||||||||    
T  13869223 caaaatagaccta 13869211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22647405 - 22647291
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcg 98  Q
    ||||||||||||||| ||||| | ||  |||||||||||| ||| |  ||||||| ||||||| |||   ||||| | || ||||||  |||||||||||    
T  22647405 aattgaattatttaatttttttgggtgggccactacaccaatttccgggaatttgaatcaaccgaaacctaaaacaaacataaaattgtataaaatctcg 22647306  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  22647305 caaaatagacctata 22647291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 36801913 - 36801947
Alignment:
Q  74 cgacacaaaattacataaaatctcgcaaaatagac 108  Q
    ||||||||||||| |||||||||||||||||||||    
T  36801913 cgacacaaaattatataaaatctcgcaaaatagac 36801947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 10393929 - 10393896
Alignment:
Q  74 cgacacaaaattacataaaatctcgcaaaataga 107  Q
    ||||||||||||| ||||||||||||||||||||    
T  10393929 cgacacaaaattatataaaatctcgcaaaataga 10393896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 51001519 - 51001474
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactgt 182  Q
    ||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  51001519 gggtgggccgtggcccaccccagcccatgaagggctccgccactgt 51001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 36584467 - 36584423
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  36584467 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 36584423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 40228546 - 40228590
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  40228546 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 40228590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 26873883 - 26873699
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||  ||||||||||||    
T  26873883 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgc 26873784  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactgtat 184  Q
    |||||||||||||| |||||||             | ||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  26873783 aaaatagacctataatcattgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgtat 26873699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29075163 - 29075284
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||| ||||    
T  29075163 aattgaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatatcgc 29075262  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  29075263 aaaatagacctatagtcgttga 29075284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46027860 - 46027747
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  46027860 aatttaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 46027761  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  46027760 aaaatagacctata 46027747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22723754 - 22723867
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  22723754 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 22723853  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  22723854 aaagtagacctata 22723867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9624176 - 9624063
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||||| ||  ||||| ||||||||||| | ||||||||||||||||||||| |||| | |||||||||| |||||||||||||    
T  9624176 aattaaattatttaaatttttgggtgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgc 9624077  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  9624076 aaaatagacctata 9624063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23469374 - 23469483
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   | |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  23469374 aattgaattatttaaattttcgggtggacaactacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgc 23469473  T
Q  100 aaaatagacc 109  Q
    ||||||||||    
T  23469474 aaaatagacc 23469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44467999 - 44468112
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  44467999 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 44468098  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  44468099 aaaatagatctata 44468112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36675465 - 36675584
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||| ||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||||||||| |    
T  36675465 aattgaattatttaaattttcgggtgggccactacatcactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcac 36675564  T
Q  100 aaaatagacctatagtcatt 119  Q
    |||||||| ||||| |||||    
T  36675565 aaaatagatctataatcatt 36675584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17167047 - 17166933
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| ||||||||||||    
T  17167047 aattgaattatttaaattttttgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcg 17166948  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  17166947 caaaatagaactata 17166933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31065601 - 31065714
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| |||||||||| |||||||| | ||||| ||||||||||| ||||||||||||     
T  31065601 aattgaattatttaaattttcgggtggaccactacaccactttgcaggaatttggattaaccaaaacataaaaccgacacaaaattgcataaaatctcgt 31065700  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  31065701 aaaatagacctata 31065714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36358288 - 36358401
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||   |||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||| ||||    
T  36358288 aattgaattatttaaatttttgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatgtcgc 36358387  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  36358388 aaaatagatctata 36358401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42241907 - 42242020
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | || || ||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||||||||| |    
T  42241907 aattgaattatttaaattttcgggtgagtcactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcac 42242006  T
Q  100 aaaatagacctata 113  Q
    ||| || |||||||    
T  42242007 aaattaaacctata 42242020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31428917 - 31428804
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||   |||||||||||||||||| ||||||||||||| ||||| | ||||| ||||||||||| |||||||||| ||    
T  31428917 aattaaattatttaaattttcgggtggaccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgc 31428818  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  31428817 aaaatagacctata 31428804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45350231 - 45350118
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  |||| ||||||||||||||  |||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  45350231 aattgaattatttaaattttcggatgggccattacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 45350132  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  45350131 aaaatagacttata 45350118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39976501 - 39976388
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | ||||||||||||||| | ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  39976501 aattgaattatttaaattttcgggtgggtcactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 39976402  T
Q  100 aaaatagacctata 113  Q
    ||| ||||| ||||    
T  39976401 aaattagacatata 39976388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43859271 - 43859158
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |   |||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  43859271 aattgaattatttaaattttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 43859172  T
Q  100 aaaatagacctata 113  Q
    ||| | ||||||||    
T  43859171 aaattcgacctata 43859158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44724041 - 44724154
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||| ||||||||||||||| |||||| |||||||||||| | |||| ||||||||||||  |||||||||| |    
T  44724041 aattgaattatttaaattttcgggtgggcctctacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgtataaaatctctc 44724140  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  44724141 aaaataaacctata 44724154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 41367836 - 41367726
Alignment:
Q  4 tgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaa 102  Q
    ||||||||||||||||| |  |   |||||||||||||||| |  |||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  41367836 tgaattatttaaattttcggatggaccactacaccactttgtagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaa 41367737  T
Q  103 atagacctata 113  Q
     ||||||||||    
T  41367736 ttagacctata 41367726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44143055 - 44142941
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||| ||||||  ||||| |||| ||||||  |||||||||||    
T  44143055 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaatcaaaatctaaaaccgacataaaattgtataaaatctcg 44142956  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  44142955 caaaatagacctata 44142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46027974 - 46027860
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| ||||  ||||| |||| ||||||  |||||||||||    
T  46027974 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaacctaaatctaaaactgacataaaattgtataaaatctcg 46027875  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  46027874 caaaatagacctata 46027860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16834255 - 16834368
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  |||||||||||||||||||  |||||||||||||||||| | ||||| ||||||||||| |||||||| |  |    
T  16834255 aattgaattatttaaattttcggatgggccactacaccactttgcagaaatttggatcaaccaaaacataaaactgacacaaaattgcataaaattttac 16834354  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  16834355 aaaataaacctata 16834368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40055771 - 40055666
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaataca-aaacgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  |||||||||||||||  |||||||||||||||||||||| | | || ||| |||||||| |||||||||||||    
T  40055771 aattgaattatttaaattttcggatgggccactacaccacttatcaagaatttggatcaaccaaaacatacaaccgatacaaaattgcataaaatctcgc 40055672  T
Q  100 aaaata 105  Q
    ||||||    
T  40055671 aaaata 40055666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9624290 - 9624176
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  |||||||||||    
T  9624290 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 9624191  T
Q  99 caaaatagacctata 113  Q
     ||||||||||||||    
T  9624190 gaaaatagacctata 9624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 18104296 - 18104409
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaata-caaaacgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||||||||||| |||||  ||||||||||||||||||| |  ||| |||||||||||| ||| ||||||||    
T  18104296 aattgaattatttaaatttttcggatgggccactacaccaatttgcgggaatttggatcaaccaaaacatgaaaccgacacaaaattgcat-aaatctcg 18104394  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  18104395 caaaatagacctata 18104409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 44142915 - 44142829
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||||||||||||||| |||||||||||||  |||| | ||||| | ||||||||| ||||||||||||||||||| |||||||    
T  44142915 gccactacaccactttgcaggaatttggatcaaagaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctata 44142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22723640 - 22723754
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||  | ||  |||||||||||| |||||  ||| ||||||||||| ||||  ||||| |||| ||||||  |||||||||||    
T  22723640 aattgaattatttaaattttgcgggtgggccactacaccaatttgcgggaaattggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcg 22723739  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  22723740 caaaatagacctata 22723754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36675351 - 36675465
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||||   ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  36675351 aattgaattatttaaatttttcgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcg 36675450  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  36675451 caaaatagacctata 36675465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40055885 - 40055771
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||| ||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  40055885 aattgaattatttaaattttttgggtgggccactgcaccaatttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcg 40055786  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  40055785 caaaatagacctata 40055771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25174328 - 25174216
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||||||||  |||||||||||||||| |||   |||| | ||||| ||||| |||||||||||    
T  25174328 aattgaattatttaaatttttcgggtggaccactacaccactttgtgagaatttggatcaaccgaaacctaaaaccaacacataattatataaaatctcg 25174229  T
Q  99 caaaatagaccta 111  Q
    |||||| ||||||    
T  25174228 caaaattgaccta 25174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8461880 - 8461766
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||| |||    
T  8461880 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaacagacataaaattgtataaaatatcg 8461781  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  8461780 caaaatagacctata 8461766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23469260 - 23469374
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  |||||||||||| |||||  ||||| ||||||||  |||   ||||| |||| ||||||  |||||||||||    
T  23469260 aattgaattatttaaatttttcagatgggccactacaccaatttgcgggaattgggatcaacagaaacctaaaaccgacataaaattgtataaaatctcg 23469359  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  23469360 caaaatagacctata 23469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31065487 - 31065601
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||| |||||||||||||| | ||  |||||| ||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  31065487 aattgatttatttaaatttttcgggtgggccactgcaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 31065586  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  31065587 caaaatagacctata 31065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31931888 - 31932002
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  31931888 aattgaattatttaaattttttgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcg 31931987  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  31931988 caaaatagacctata 31932002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36358174 - 36358288
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  36358174 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 36358273  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  36358274 caaaatagatctata 36358288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45350345 - 45350231
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  | |||||||||| |||||  ||||||| ||||||| |||   |||| ||||| ||||||  |||||||||||    
T  45350345 aattgaattatttaaatttttcgggtgggacactacaccaatttgcgggaatttgaatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 45350246  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  45350245 caaaatagacctata 45350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 46828821 - 46828926
Alignment:
Q  8 ttatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaa-aacgacacaaaattacataaaatctcgcaaaatag 106  Q
    ||||||||||||| ||||   |||||||||||||||||  ||||||||||||||| |||   || | ||||| ||||||  | |||||||||||||||||    
T  46828821 ttatttaaattttcgagtggaccactacaccactttgcgggaatttggatcaaccgaaacctaataccgacataaaattgtacaaaatctcgcaaaatag 46828920  T
Q  107 acctat 112  Q
    ||||||    
T  46828921 acctat 46828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17167161 - 17167047
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   |||||||| || |||||  ||||| ||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  17167161 aattgaattatttaaatttttcgggtggaccactacatcaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 17167062  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  17167061 caaaatagacctata 17167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 23562656 - 23562738
Alignment:
Q  31 actacaccactttgcaagaatttggatcaaccaaaatacaaaacgacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||||||   |||||||||||| |||||   ||  ||||||||||||  |||||||||||||||||||| |||||    
T  23562656 actacaccactttgcggaaatttggatcaatcaaaacttaattcgacacaaaattgtataaaatctcgcaaaatagatctata 23562738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26873997 - 26873883
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||| | ||||  ||||| |||| ||||||  |||||| ||||    
T  26873997 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaatcgaaatctaaaactgacataaaattgtataaaacctcg 26873898  T
Q  99 caaaatagacctata 113  Q
    |||| ||||||||||    
T  26873897 caaattagacctata 26873883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43859385 - 43859271
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| ||||||  |||||||||||||| |||   ||||| |||  ||||||  ||||||||||     
T  43859385 aattgaattatttaaatttttcgggtggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctca 43859286  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  43859285 caaaatagacctata 43859271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 44723955 - 44724041
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||| ||||   ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||||||||||||||||||    
T  44723955 gccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 44724041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 8727875 - 8727794
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaatagac 108  Q
    ||||||| ||||||||| |||||||||||||| || ||| | |||| | ||||||||| ||||||||||| | |||||||||    
T  8727875 gccactataccactttgtaagaatttggatcagccgaaacataaaatcaacacaaaatgacataaaatcttgtaaaatagac 8727794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29663095 - 29663010
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaat 84  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||  ||||||||||||| || ||||  |||| |||||||||||    
T  29663095 aattgaattatttaaatttttcgggtgggccactacaccactttgtgagaatttggatcagccgaaatctaaaaccgacacaaaat 29663010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 29075098 - 29075163
Alignment:
Q  49 aatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||||| |||   ||||| |||| ||||||  ||||||||||||||||||||||||||    
T  29075098 aatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 29075163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 44724178 - 44724222
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  44724178 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 44724222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 65114 - 65001
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  65114 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 65015  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  65014 aaaatagacctata 65001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 65342 - 65228
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||| ||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  65342 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 65243  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  65242 caaaatagacctata 65228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 65228 - 65114
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||| ||||||||| |||   ||||| |||| ||||||  ||||||||||     
T  65228 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 65129  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  65128 caaaatagacctata 65114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 64977 - 64933
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  64977 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 64933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3886759 - 3886872
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  3886759 aattgaattatttaaatttttggttgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgc 3886858  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  3886859 aaaatagacctata 3886872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6317057 - 6316944
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||||| |    
T  6317057 aattgaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcac 6316958  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  6316957 aaaatagacctata 6316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28565065 - 28564952
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  28565065 aattgaatcatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgc 28564966  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  28564965 aaaatagacctata 28564952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28572688 - 28572575
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  28572688 aattgaatcatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgc 28572589  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  28572588 aaaatagacctata 28572575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5590152 - 5590273
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||| ||||||||||||     
T  5590152 aattgaattatttaaattttggggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcga 5590251  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  5590252 aaaatagacctatagtcgttga 5590273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22658325 - 22658438
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||| ||||| | |||| |||||||||||| |||||||||||||    
T  22658325 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatctcgc 22658424  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  22658425 aaaatagacctata 22658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24797032 - 24797145
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||| ||    
T  24797032 aattgaattatttaaatttttgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgc 24797131  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  24797132 aaaatagacctata 24797145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41837933 - 41838046
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  41837933 aattgaattatttaaattttcgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 41838032  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  41838033 aaaatagacctata 41838046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42556072 - 42556185
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||| |||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  42556072 aattgaattatttaaattttcgggtgggccactgcaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 42556171  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  42556172 aaaatagacctata 42556185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4231400 - 4231287
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||| |||||||||||| | |||| |||||||||||| ||||||||||||     
T  4231400 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgt 4231301  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  4231300 aaaatagacctata 4231287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21435020 - 21434907
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| ||||||| |||||    
T  21435020 aattgaattatttaaattttcgagtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaacctcgc 21434921  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  21434920 aaaataaacctata 21434907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2317242 - 2317129
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||| |||||||||||||| ||||||||||||||||||| | |||| | ||||||||||  ||||||||||||    
T  2317242 aattgaattatttaaattttcgggtgggccattacaccactttgcatgaatttggatcaaccaaaacataaaaccaacacaaaattgtataaaatctcgc 2317143  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  2317142 aaaatagacctata 2317129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7012518 - 7012397
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| ||||| || ||||    
T  7012518 aattgaattatttaaattttagggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataagatatcgc 7012419  T
Q  100 aaaatagacctatagtcattga 121  Q
    |||||||||||||| |||||||    
T  7012418 aaaatagacctataatcattga 7012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10092435 - 10092322
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||| |||||| |||||||||||||| |||| | |||| | |||||||||| |||||||||||||    
T  10092435 aattgaattatttaaattttcgggtgggccactacaccattttgcaggaatttggatcaactaaaacaaaaaaccaacacaaaattgcataaaatctcgc 10092336  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  10092335 aaaatagacctata 10092322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36060538 - 36060425
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||||||| || ||||||||||||||||||| | ||||  ||||||||||| |||||||||||||    
T  36060538 aattgaattatttaaattttcgggtgtgccactacaccactttccaggaatttggatcaaccaaaacataaaattgacacaaaattgcataaaatctcgc 36060439  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  36060438 aaaatatacctata 36060425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43117530 - 43117416
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| |||||||||||||| ||||||||||||||||||| | ||||| |||||||||||  |||||||||||    
T  43117530 aattgaattatttaaatttttcggatgggccattacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcg 43117431  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  43117430 caaaatagacctata 43117416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3659801 - 3659914
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||  | ||  ||||||||||||||||||| |||||||||||||||||||   ||| | ||||||||||| |||||||||||||    
T  3659801 aattgaattatttaaatttccgggtgggccactacaccactttgcaggaatttggatcaaccaaaacgtaaacctgacacaaaattgcataaaatctcgc 3659900  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  3659901 aaaatagacttata 3659914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 9830787 - 9830675
Alignment:
Q  2 attgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgca 100  Q
    |||||||||||||||||||    |  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| || ||||||||||||||    
T  9830787 attgaattatttaaattttcagatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaagttgcataaaatctcgca 9830688  T
Q  101 aaatagacctata 113  Q
    ||||| |||||||    
T  9830687 aaataaacctata 9830675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7413213 - 7413099
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||||||||||||  ||||||||||||| |||||   ||||| |||||||||||  |||||||||||    
T  7413213 aattgaattatttaaattttttgggtgggccactacaccactttgcgggaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcg 7413114  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  7413113 caaaatagacctata 7413099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 41169989 - 41169879
Alignment:
Q  4 tgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaataca-aaacgacacaaaattacataaaatctcgcaaa 102  Q
    ||||||||||||||||| ||||  ||||||||||||||||||  |||||||||| ||||||||   | || ||||| ||||||| |||||||||||||||    
T  41169989 tgaattatttaaattttcgagtgggccactacaccactttgcgggaatttggattaaccaaaacctagaaccgacataaaattatataaaatctcgcaaa 41169890  T
Q  103 atagacctata 113  Q
    |||||||||||    
T  41169889 atagacctata 41169879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1098238 - 1098125
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||  | ||||||||||||||||||| | ||||| || |||||||| |||||||| ||||    
T  1098238 aattgaattatttaaattttcgggtgggccactacaccactttataggaatttggatcaaccaaaacataaaactgatacaaaattgcataaaatatcgc 1098139  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  1098138 aaattagacctata 1098125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4697987 - 4697874
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||| |     
T  4697987 aattgaattatttaaattttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgt 4697888  T
Q  100 aaaatagacctata 113  Q
    ||| || |||||||    
T  4697887 aaagtaaacctata 4697874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 38567306 - 38567197
Alignment:
Q  5 gaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaa 103  Q
    |||||||||||||||| | ||  |||||||||| |||||||| |||||||||||||| |||| | |||| | |||||||||| |||||||||||||||||    
T  38567306 gaattatttaaattttcgggtgggccactacacaactttgcaggaatttggatcaacaaaaacataaaatcaacacaaaattgcataaaatctcgcaaaa 38567207  T
Q  104 tagacctata 113  Q
    || |||||||    
T  38567206 tatacctata 38567197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 25642739 - 25642823
Alignment:
Q  29 ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctat 112  Q
    ||||| ||||||||||| ||||||||||||||||||||   ||||| |||||||||||| |||||||||||||||||||||||||    
T  25642739 ccacttcaccactttgcgagaatttggatcaaccaaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacctat 25642823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1184003 - 1183890
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||   ||||||||| |||||  | ||||||| ||||||||||| | |||| ||| |||||||| |||||||||||||    
T  1184003 aattgaattatttaaatttttgggtggtccactacactactttttaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 1183904  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  1183903 aaaatagatctata 1183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7242614 - 7242726
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||  | ||  ||||||| |||| |||||| ||||||||||||||||||| | ||||| | ||||||||| |||||||||||||    
T  7242614 aattgaattatttaaatttcgg-gtgggccactataccattttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 7242712  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  7242713 aaaataaacctata 7242726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4698101 - 4697987
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||  |||||||||| |||| ||||  ||||| |||| ||||||  |||||||||||    
T  4698101 aattgaattatttaaatttttcgggtgagccactacaccaatttgcgggaatttggataaaccgaaatctaaaaccgacataaaattgtataaaatctcg 4698002  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  4698001 caaaatagatctata 4697987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7242500 - 7242614
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  |||||||||||    
T  7242500 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 7242599  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  7242600 caaaatagacatata 7242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21435134 - 21435020
Alignment:
Q  1 aattgaattatttaaa-tttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||| |||||| ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  ||||||||| |    
T  21435134 aattgaattatttaaactttttgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctag 21435035  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  21435034 caaaatagacctata 21435020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42555958 - 42556072
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||||||  ||||  ||||||||||||||| ||||  ||||| |||| ||||||  |||||||||||    
T  42555958 aattgaattatttaaatttttcgggtgggccactacaccaaattgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcg 42556057  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  42556058 caaaatagacctata 42556072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43117644 - 43117530
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||| |||| |||||| ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  43117644 aattgaattatttaaatttttcgggtgggccactaaaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 43117545  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  43117544 caaaatagacctata 43117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41388186 - 41388073
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||    ||||||||||||||||| |||||||||| |||||||  | |||| ||||||||||||  ||||||||| ||    
T  41388186 aattgaattatttaaattttcgggtggatcactacaccactttgcaggaatttggataaaccaaatcataaaaccgacacaaaattgtataaaatcttgc 41388087  T
Q  100 aaaatagacctata 113  Q
    |||||| |||||||    
T  41388086 aaaataaacctata 41388073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 2317353 - 2317242
Alignment:
Q  4 tgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaa 101  Q
    |||||||||||||||||| | || | ||||||||||| |||||  ||||||||||||||| ||||  ||||| |||| ||||||  ||||||| ||||||    
T  2317353 tgaattatttaaatttttcgggtgaaccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatatcgcaa 2317254  T
Q  102 aatagacctata 113  Q
    ||||||||||||    
T  2317253 aatagacctata 2317242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5590038 - 5590152
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  5590038 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 5590137  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  5590138 caaaatagacctata 5590152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 25383051 - 25383132
Alignment:
Q  35 caccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctatagtc 116  Q
    ||||||||||| ||||||||||||||| ||||   ||||| |||||||||| | |||||||||||||||||||||||||||||    
T  25383051 caccactttgcgagaatttggatcaactaaaacctaaaaccgacacaaaat-atataaaatctcgcaaaatagacctatagtc 25383132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28565179 - 28565065
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||     
T  28565179 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 28565080  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  28565079 caaaatagacctata 28565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28572802 - 28572688
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||     
T  28572802 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 28572703  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  28572702 caaaatagacctata 28572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36060652 - 36060538
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  36060652 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcg 36060553  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  36060552 caaaatagacctata 36060538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41837819 - 41837933
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  ||||||||||     
T  41837819 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcc 41837918  T
Q  99 caaaatagacctata 113  Q
    ||||||| |||||||    
T  41837919 caaaataaacctata 41837933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 197384 - 197270
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| ||||||| ||||||  |||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  197384 aattgaattatttaaattttttggatgggccattacaccaatttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcg 197285  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  197284 caaaatagacctata 197270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 312221 - 312107
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| ||||||| ||||||  |||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  312221 aattgaattatttaaattttttggatgggccattacaccaatttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcg 312122  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  312121 caaaatagacctata 312107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1184117 - 1184003
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  1184117 aattgaattatttaaatttttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 1184018  T
Q  99 caaaatagacctata 113  Q
    |||| ||||||||||    
T  1184017 caaattagacctata 1184003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22658211 - 22658325
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||||   ||||| ||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  22658211 aattgaattatttaaatttttcgggtgggccactacaccaatttgtgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 22658310  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  22658311 caaaatagacctata 22658325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 38567396 - 38567310
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||||||||||||||||||    
T  38567396 gccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 38567310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 7422056 - 7422140
Alignment:
Q  30 cactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||| |||||| |  ||||||||||||||| ||||  ||||| |||||||||||  |||||||||||||||||| |||||||    
T  7422056 cactacatcacttttcgggaatttggatcaaccgaaatctaaaaccgacacaaaattgtataaaatctcgcaaaataaacctata 7422140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1098352 - 1098238
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| ||||||  |||||||||||||| |||   ||||| |||| ||| ||  ||||||||||     
T  1098352 aattgaattatttaaatttttcggttggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaactgacataaatttgtataaaatctca 1098253  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  1098252 caaaatagacctata 1098238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3659687 - 3659801
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||   ||||| |||||||| |||   ||||| || | ||||||  |||||||||||    
T  3659687 aattgaattatttaaatttttcgggtgagccactacaccaatttgcggaaattttgatcaaccgaaacctaaaaccgatataaaattgtataaaatctcg 3659786  T
Q  99 caaaatagacctata 113  Q
    ||||| |||||||||    
T  3659787 caaaacagacctata 3659801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3886645 - 3886759
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||| |||||||||||||||| | ||  | || ||||||| |||||  ||||| |||||||||||||   ||||| |||| ||||||  |||||||||||    
T  3886645 aattaaattatttaaatttttcgggtgggtcagtacaccaatttgcgggaattgggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 3886744  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  3886745 caaaatagacctata 3886759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4231514 - 4231400
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  | |||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  4231514 aattgaattatttaaatttttcggatggggcactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 4231415  T
Q  99 caaaatagacctata 113  Q
     ||||||||||||||    
T  4231414 taaaatagacctata 4231400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7012632 - 7012518
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||| ||| |||||  ||||||||||||||  |||   ||||| |||| ||||||  |||||||||||    
T  7012632 aattgaattatttaaatttttcgggtggaccactactccaatttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcg 7012533  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  7012532 caaaatagacctata 7012518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10092549 - 10092435
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  ||||||| |||| |||||  ||||||||||| |||||||   |||| ||||| ||||||  |||||||||||    
T  10092549 aattgaattatttaaatttttcggatgggccactataccaatttgcgggaatttggatctaccaaaacctaaaatcgacataaaattgtataaaatctcg 10092450  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  10092449 caaaatagatctata 10092435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11635941 - 11635819
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  | ||||| ||||||||||   |||||||||||  | |||   ||||| |||||||||||| ||||||| |||    
T  11635941 aattgaattatttaaatttttcgggtgggtcactagaccactttgcggaaatttggatcagtcgaaacctaaaaccgacacaaaattatataaaatttcg 11635842  T
Q  99 caaaatagacctatagtcattga 121  Q
    ||||||||||||||  |||||||    
T  11635841 caaaatagacctatgatcattga 11635819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41388300 - 41388186
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||  ||||||| ||||||| |||   ||||| |||| ||||||  ||||||||||     
T  41388300 aattgaattatttaaatttttcgggtgggctactacaccaatttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 41388201  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  41388200 caaaatagacctata 41388186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 6316920 - 6316877
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccact 180  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||    
T  6316920 gggtgggccgtggcccaccccagcccatgaaaggctccgccact 6316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6317171 - 6317065
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||| || |||   |||| ||||| ||||||  ||||| |||||    
T  6317171 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcatccgaaacctaaaatcgacataaaattgtataaattctcg 6317072  T
Q  99 caaaata 105  Q
    |||||||    
T  6317071 caaaata 6317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41169879 - 41169765
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  | ||||||||||||||||  |||||| |||||||| |||   |||| |||||||||||||  |||||| |||    
T  41169879 aattgaattatttaaattttttggatgggtcactacaccactttgcgtgaatttagatcaacctaaacctaaaaccgacacaaaattatttaaaatatcg 41169780  T
Q  99 caaaatagacctata 113  Q
     ||||||||| ||||    
T  41169779 taaaatagacgtata 41169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 8996455 - 8996410
Alignment:
Q  74 cgacacaaaattacataaaatctcgcaaaatagacctatagtcatt 119  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||    
T  8996455 cgacacaaaattgcataaaatctcgtaaaataaacctatggtcatt 8996410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 7012373 - 7012333
Alignment:
Q  145 cgtggcccacctcagctcatgaaaggctccgccactgtatg 185  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  7012373 cgtggcccaccccagcccatgaagggctccgccactgtatg 7012333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 9830651 - 9830607
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  9830651 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 9830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 11635802 - 11635758
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||||||||  ||| |||||| |||||||||||||    
T  11635802 gggtgggtcgtggcccaccctagcccatgaagggctccgccactg 11635758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 34934371 - 34934415
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  34934371 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 34934415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23869843 - 23869730
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  23869843 aattgaattatttaaattttcgggtgggccactacactactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 23869744  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  23869743 aaaatagacctata 23869730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26293340 - 26293227
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  26293340 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 26293241  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  26293240 aaaatagacctata 26293227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34983456 - 34983343
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  34983456 aattgaattatttaaatttttggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 34983357  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  34983356 aaaatagacctata 34983343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44545707 - 44545820
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||| ||||    
T  44545707 aattgaattatttaaattttcgagtgggccattacaccactttgcaagaatttggatcaaccaaaatataaaaccgacacaaaattgtataaaatatcgc 44545806  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  44545807 aaaatagacctata 44545820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 2249761 - 2249580
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||| |||||||||||| | |||| |||||||||||| |||||||||||||    
T  2249761 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 2249662  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||| ||||| |||||||               ||||||||||||||||||| |||| |||||| |||||||||||||    
T  2249661 aaaatagatctataatcattgattttttaattttttcgggtgggtcgtggcccaccccagcccatgaagggctccgccactg 2249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 38763894 - 38763713
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  38763894 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 38763795  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
     ||||||||||||| || ||||             | ||||||| |||||||||||||||| |||||| |||||||||||||    
T  38763794 taaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactg 38763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7366331 - 7366210
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||| ||||| | |||||  |||||||||| |||||||||||||    
T  7366331 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaagcaaaacataaaactcacacaaaattgcataaaatctcgc 7366232  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  7366231 aaaatagacctatagtcgttga 7366210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28745471 - 28745583
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | || |||||||||||||||||||| |||||||||| |||||||| | |||| |||||||||||| |||||||||||||    
T  28745471 aattgaattatttaaattttcgggtgagccactacaccactttgcaggaatttggat-aaccaaaacataaaatcgacacaaaattgcataaaatctcgc 28745569  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  28745570 aaaatagacctata 28745583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1021046 - 1021159
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||  | |||| ||||||||||||  ||||||||||||    
T  1021046 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgc 1021145  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  1021146 aaaatagacctata 1021159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26860640 - 26860753
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| |  |||||||||||||||||| | |||| |||||| ||||| |||||||||||||    
T  26860640 aattgaattatttaaatttttgggtgggccactacaccactttgtagaaatttggatcaaccaaaacataaaaccgacacgaaattgcataaaatctcgc 26860739  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  26860740 aaaatagacctata 26860753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 13615941 - 13616122
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaata-caaaacgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||  |||||||||||| |||||| ||||||||||||||||||| |  ||||| |||||||||| |||||||||||||    
T  13615941 aattaaattatttaaattttcgggtgggccactacaccattttgcaggaatttggatcaaccaaaacataaaaacaacacaaaattgcataaaatctcgc 13616040  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||||| |||||||||||    
T  13616041 aaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaaagactccgccactg 13616122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16194432 - 16194319
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||||| |||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  16194432 aattgaattatttaaattttcgggtgggccactacaccactctgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 16194333  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  16194332 aaaatagacttata 16194319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34494453 - 34494566
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | |||| ||| |||||||| |||||||||||||    
T  34494453 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgatacaaaattgcataaaatctcgc 34494552  T
Q  100 aaaatagacctata 113  Q
    |||| |||||||||    
T  34494553 aaaagagacctata 34494566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36436160 - 36436273
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||| ||||| | |||| |||||||||||| |||||||| ||||    
T  36436160 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaagcaaaacataaaaccgacacaaaattgcataaaatatcgc 36436259  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  36436260 aaaatagacttata 36436273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11935353 - 11935467
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||||||| | |||||||||||||||||||||  |||| ||||||||||||  |||||||||||    
T  11935353 aattgaattatttaaattttttgggtgggccactacaccactttacgagaatttggatcaaccaaaatctaaaaccgacacaaaattgtataaaatctcg 11935452  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  11935453 caaaatagacttata 11935467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 38527354 - 38527173
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  || |||||||||||||||| ||||||||||||||||| | | |||| ||| |||||||| ||||||||||| |    
T  38527354 aattgaattatttaaattttcgggtgggctactacaccactttgcaggaatttggatcaaccaagacataaaaccgatacaaaattgcataaaatctcac 38527255  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  38527254 aaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 38527173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1115016 - 1115129
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||  |||||||||||||||||||  |||||||||||||||||  | |||| ||||||||||||  ||||||||||||    
T  1115016 aattaaattatttaaattttcgggtgggccactacaccactttgcagaaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgc 1115115  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  1115116 aaaatagacctata 1115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11764974 - 11764861
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||   |||||||||||||||||| ||||||| ||||||||||| | |||| ||||||||| ||  ||||||||| ||    
T  11764974 aattgaattatttaaatttttgtgtggaccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaagttgtataaaatcttgc 11764875  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  11764874 aaaatagacctata 11764861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12995146 - 12995033
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||| |||| | ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  12995146 aattgaattatttaaattttcgggtgggccactacaccaatttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 12995047  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  12995046 aaattagacctata 12995033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42016683 - 42016570
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  |||||| || || |||||| ||||||||||||||||||| | |||| | |||||||||| ||||||||||| |    
T  42016683 aattgaattatttaaatttttgggtgggccactgcatcaatttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcac 42016584  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  42016583 aaaatagacctata 42016570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19283908 - 19284015
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | ||||||||||||||||| |||||| |||||||||||| | |||| ||| |||||||| |||||||||||||    
T  19283908 aattgaattatttaaattttcgggtgggacactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 19284007  T
Q  100 aaaataga 107  Q
    ||||||||    
T  19284008 aaaataga 19284015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31392726 - 31392614
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||| ||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||||||||  |    
T  31392726 aattgaattacttaaattttgg-gtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaac 31392628  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  31392627 aaaatagacttata 31392614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1114902 - 1115016
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||| |||||||||||| |||||| ||||||||||||||| |||   |||| | ||| ||||||  |||||||||||    
T  1114902 aattgaattatttaaatttttcgggtaggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaatcaacataaaattgtataaaatctcg 1115001  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  1115002 caaaatagacctata 1115016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22674717 - 22674831
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||| || |||   ||||| ||||||||||| ||||||||||||    
T  22674717 aattgaattatttaaattttttgggtgggccactacaccaatttgcgggaatttggatcagccgaaacctaaaaccgacacaaaattgcataaaatctcg 22674816  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  22674817 caaaatagacctata 22674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28745357 - 28745471
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  |||||||||||| |||||  |||||| |||||||||||||  ||||| | || ||||||| |||||||||||    
T  28745357 aattgaattatttaaatttttcaggtgggccactacaccaatttgcgggaatttagatcaaccaaaatctaaaaccggcataaaattatataaaatctcg 28745456  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  28745457 caaaatagacctata 28745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 43471462 - 43471545
Alignment:
Q  31 actacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||||||||||| |||||||||||||| |||||   ||||| |||||||||||  ||||||||||||||||||||||||||    
T  43471462 actacaccactttgcgagaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctata 43471545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6749870 - 6749984
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   |||| ||||| ||||||  ||||||| |||    
T  6749870 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatatcg 6749969  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  6749970 caaaatagacctata 6749984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13615827 - 13615941
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  |||||||||||| |||||   ||||||||||||||||||   ||||| |||| ||||||  |||||||||||    
T  13615827 aattgaattatttaaatttttcaggtgggccactacaccaatttgcggaaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 13615926  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  13615927 caaaatagacctata 13615941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36436046 - 36436160
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  36436046 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 36436145  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  36436146 caaaatagacctata 36436160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42016797 - 42016683
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||| |||||||| |||||  |||||||||||||||||||   ||||| |||| ||||||  |||||||||||    
T  42016797 aattgaattatttaaattttttgggtgggccgctacaccaatttgcgggaatttggatcaaccaaaacttaaaaccgacataaaattgtataaaatctcg 42016698  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  42016697 caaaatagacctata 42016683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 6749984 - 6750165
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||    |||||||||||||||||  |||||||||||| ||||| | |||| | |||||||||| |||||||||||      
T  6749984 aattgaattatttaaattttcgggtggatcactacaccactttgcagaaatttggatcaatcaaaacataaaaccaacacaaaattgcataaaatctcaa 6750083  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
     ||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  6750084 taaatagacctataatcgttgatttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6750165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11935239 - 11935353
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||| |||||||||||||  ||||||||||||||| ||||  |||| ||||| ||||||  |||||| ||||    
T  11935239 aattgaattatttaaatttttctggtgggccaatacaccactttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaacctcg 11935338  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  11935339 caaaatagacctata 11935353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16194546 - 16194432
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  16194546 aattgaattatttaaatttttcgggtgggctactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 16194447  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  16194446 caaaatagacctata 16194432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23869957 - 23869843
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  23869957 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 23869858  T
Q  99 caaaatagacctata 113  Q
    ||||||| |||||||    
T  23869857 caaaatatacctata 23869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26293454 - 26293340
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  26293454 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcg 26293355  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  26293354 caaaatagacctata 26293340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31392840 - 31392726
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||||| |||||| ||||||| | |||   ||||| |||| ||||||  |||||||||||    
T  31392840 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgagaattgggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcg 31392741  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  31392740 caaaatagacctata 31392726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34983570 - 34983456
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  | |||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  34983570 aattgaattatttaaattttttgggtgggtcactacaccaatttgctggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 34983471  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  34983470 caaaatagacctata 34983456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 3836347 - 3836439
Alignment:
Q  30 cactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctatagtcattga 121  Q
    ||||||||||||| ||  |||||||||||||||||||   ||||| |||||||||||  ||||||||||| |||||||| |||||||| ||||    
T  3836347 cactacaccacttcgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagatctatagtccttga 3836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2249875 - 2249761
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||   |||||||||||    
T  2249875 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcg 2249776  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  2249775 caaaatagacctata 2249761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11765088 - 11764974
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  |||||||||||| |  ||| | ||||| |||| ||||||  |||||||||||    
T  11765088 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcagctgaaacataaaaccgacataaaattgtataaaatctcg 11764989  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  11764988 caaaatagacctata 11764974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 38763964 - 38763894
Alignment:
Q  44 gcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    |||||||||||||||||||||||   ||||| |||| ||||||  ||||||||||||||||||||||||||    
T  38763964 gcaagaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 38763894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 41699317 - 41699251
Alignment:
Q  48 gaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||||||||||||||| | ||||| | ||||||||| ||||||||||||||||||| |||||||    
T  41699317 gaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctata 41699251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44545593 - 44545707
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| ||   | ||||||||||| |||||  ||||||||||||||| |||   ||||| | || ||||||  |||||||||||    
T  44545593 aattgaattatttaaatttttcaggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccaacataaaattgtataaaatctcg 44545692  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  44545693 caaaatagacctata 44545707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7366445 - 7366337
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||| | |||   ||||| |||| ||||||  |||||||||||    
T  7366445 aattgaattatttaaatttttcgcgtgggccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcg 7366346  T
Q  99 caaaataga 107  Q
    |||||||||    
T  7366345 caaaataga 7366337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26860526 - 26860640
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  ||||||||| || |||||   |||| ||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  26860526 aattgaattatttaaatttttcgggtgggccactacatcaatttgcggaaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 26860625  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  26860626 caaaatagacctata 26860640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 7366191 - 7366149
Alignment:
Q  140 tgggtcgtggcccacctcagctcatgaaaggctccgccactgt 182  Q
    |||| |||||||||||||||| ||| |||||||||||||||||    
T  7366191 tgggccgtggcccacctcagcccataaaaggctccgccactgt 7366149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3836205 - 3836317
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||| ||||||||  |||||| |||||||  |||   ||||| |||| ||||||  |||||||||| |    
T  3836205 aattgaattatttaaattttcgggt-ggccactacatcactttgcgggaattttgatcaactgaaacctaaaacagacataaaattgtataaaatctcac 3836303  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  3836304 aaaatagatctata 3836317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29035377 - 29035490
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| ||||  |  ||||||||||||||| | ||||| |||||||| |||   |||| ||||||||| ||  | ||||||||     
T  29035377 aattgaattatttaaatttttcgagtgggaaactacaccactttgcgaaaatttagatcaaccgaaacctaaaatcgacacaaagttgtagaaaatctca 29035476  T
Q  99 caaaatagacctat 112  Q
    |||| |||||||||    
T  29035477 caaagtagacctat 29035490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 36436296 - 36436341
Alignment:
Q  136 tgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||| ||||||||||| |||| |||||| |||||||||||||    
T  36436296 tgggtgggccgtggcccaccccagcccatgaagggctccgccactg 36436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 38527438 - 38527361
Alignment:
Q  29 ccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgcaaaata 105  Q
    ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||||||||||||||    
T  38527438 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 38527361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28745609 - 28745653
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  28745609 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 28745653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 40428758 - 40428879
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||   | |||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  40428758 aattgaattatttaaattttcgagtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 40428857  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||||||||||||||||| ||||    
T  40428858 aaaatagacctatagtcgttga 40428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 51139866 - 51139753
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||  ||||||||||||    
T  51139866 aattgaattatttaaattttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgc 51139767  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  51139766 aaaatagacctata 51139753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8530263 - 8530150
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||  |||||||||||||||||||||||||||||||||||| || | |||| |||||||||||| |||||||||||||    
T  8530263 aattgaattatttaaattttcaggtgggccactacaccactttgcaagaatttggatcaaccagaacataaaatcgacacaaaattgcataaaatctcgc 8530164  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  8530163 aaaatagacctata 8530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23177522 - 23177409
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||  |||||||||||||||||||| |||| ||| |||||||| |||||||||||||    
T  23177522 aattgaattatttaaatttttgggtgggccactacaccactttgcagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgc 23177423  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  23177422 aaaatagacttata 23177409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544695 - 24544808
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||  | |||| |||||||||||| |||||||||||||    
T  24544695 aattgaattatttaaattttcgagtgggccactacaccactttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgc 24544794  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  24544795 aaaatagacttata 24544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33012034 - 33012147
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||||||||| |    
T  33012034 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcac 33012133  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  33012134 aaaatagacctata 33012147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25299065 - 25299184
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| || |||||||||||||    
T  25299065 aattgaattatttaaattttccggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaagttgcataaaatctcgc 25299164  T
Q  100 aaaatagacctatagtcatt 119  Q
    |||||||||||||| |||||    
T  25299165 aaaatagacctataatcatt 25299184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16692926 - 16693107
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||| ||||||||||||     
T  16692926 aattgaattatttaaattttcgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgt 16693025  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  16693026 aaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 16693107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 24790615 - 24790434
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  24790615 aattgaattatttaaattttcgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 24790516  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||| |||| ||||||| ||||             ||||||||||||||||||||  |||| |||||| |||||| ||||||    
T  24790515 aaaacagacttatagtcgttgatttttttatttttctgggtgggtcgtggcccactccagcccatgaagggctccaccactg 24790434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 42372150 - 42372029
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| |||||| |||||||||||| | ||||| ||||||||||| ||||||||||| |    
T  42372150 aattgaattatttaaattttcgggtggaccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcac 42372051  T
Q  100 aaaatagacctatagtcattga 121  Q
    |||||||||||||| |||||||    
T  42372050 aaaatagacctataatcattga 42372029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 17285271 - 17285452
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||| | |||||| |||||||||||||    
T  17285271 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatataaaattgcataaaatctcgc 17285370  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||| |||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  17285371 aaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 17285452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 919687 - 919800
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  919687 aattgaattatttaaattttcaggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgc 919786  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  919787 aaaatagatctata 919800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 8086410 - 8086289
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | ||| |||||| |||||||||| ||    
T  8086410 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaacctacataaaattgcataaaatctagc 8086311  T
Q  100 aaaatagacctatagtcattga 121  Q
    |||||||| |||||||| ||||    
T  8086310 aaaatagatctatagtcgttga 8086289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29170122 - 29170009
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  || |||||||||||||| | ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  29170122 aattgaattatttaaatttttgggtgggctactacaccactttgtaggaatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgc 29170023  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  29170022 aaattagacctata 29170009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44052436 - 44052549
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacga-cacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | ||||||||||||||| | ||||||||||||| ||||| | ||||| | |||||||||||||||||||||||    
T  44052436 aattgaattatttaaattttcgggtgggtcactacaccactttgtaggaatttggatcaatcaaaacataaaaccaacacaaaattacataaaatctcgc 44052535  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  44052536 aaaatagacctata 44052549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44317747 - 44317634
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||  |||||||||||||||| || |||||| |||||||||||| | |||| | ||||||||||||||||||||||||    
T  44317747 aattaaattatttaaattttcgggtgggccactacaccactttacaggaatttagatcaaccaaaacataaaatcaacacaaaattacataaaatctcgc 44317648  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  44317647 aaaatagacctata 44317634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46224737 - 46224844
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | |||| ||| |||||||| |||||||||||||    
T  46224737 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatacaaaattgcataaaatctcgc 46224836  T
Q  100 aaaataga 107  Q
    ||||||||    
T  46224837 aaaataga 46224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 48708394 - 48708507
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||   ||  ||||||||||||||||||| |||||||||||||| |||| | |||| ||| | |||||| |||||||||||||    
T  48708394 aattgaattatttaaattttcaggtgggccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatataaaattgcataaaatctcgc 48708493  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  48708494 aaaatagacctata 48708507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 37125873 - 37125692
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  | ||||  ||||||||||| |||||||||||||||||||   ||||| ||| ||||||| |||||||| ||||    
T  37125873 aattgaattatttaaattttcgggtgggtcactgtaccactttgcaggaatttggatcaaccaaaacgtaaaactgacgcaaaattgcataaaatatcgc 37125774  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||| |||||||||||||||| |||||| |||||||||||||    
T  37125773 aaaatagacctataatcgttgattttataatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactg 37125692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29981684 - 29981797
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaa-tacaaaacgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||| |||||||| |  ||| |||||||||||| |||||||| || |    
T  29981684 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggataaaccaaaacttaaaaccgacacaaaattgcataaaatatcac 29981783  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  29981784 aaagtagacctata 29981797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40567146 - 40567042
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||| |||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||| | |||| | |||||||||| |||||||||||||    
T  40567146 aattgaactatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgc 40567047  T
Q  100 aaaat 104  Q
    |||||    
T  40567046 aaaat 40567042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 6849933 - 6849752
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| |  |||||| ||||||||||| | |||| ||| ||||||||  ||||||||||||    
T  6849933 aattgaattatttaaattttcgggtgggccactacaccactttgtagaaatttgaatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgc 6849834  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    ||| |||||||||| || ||||             | ||||||| ||||||||||| |||| |||||| |||||||||||||    
T  6849833 aaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6849752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40567260 - 40567146
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  |||||||||||||||||||   ||||| |||| ||||||  |||||||||||    
T  40567260 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 40567161  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  40567160 caaaatagacctata 40567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 48708280 - 48708394
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | || || |||||||||| |||||  |||||||||||||||||||   ||||| |||| ||||||  |||||||||||    
T  48708280 aattgaattatttaaatttttcgggtgagacactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcg 48708379  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  48708380 caaaatagacctata 48708394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9042396 - 9042508
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||| | |||| ||| || ||||| ||||||||||||     
T  9042396 aattgaattatttaaattttcgggtgtgccactacaccactttgtaggaatttggatcaaccaaaacataaaatcgatac-aaattgcataaaatctcgt 9042494  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  9042495 aaattagacctata 9042508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45837024 - 45836911
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||| ||||||||||||||| | ||   |||||||||||||||||| |||||| |||||||||||| | |||| ||| ||||||||  ||||||||||||    
T  45837024 aattaaattatttaaattttcgggtggaccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgc 45836925  T
Q  100 aaaatagacctata 113  Q
    || |||||||||||    
T  45836924 aatatagacctata 45836911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 47561907 - 47561794
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaacg-acacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |    ||||||| |||||||||  |||||||||||||||||| | |||||  |||||||||| |||||||| ||||    
T  47561907 aattgaattatttaaatttttggttggttcactacatcactttgcagtaatttggatcaaccaaaacataaaacctacacaaaattgcataaaatatcgc 47561808  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  47561807 aaaatagacctata 47561794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8086524 - 8086410
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  8086524 aattgaattatttaaatttttcgtgtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 8086425  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  8086424 caaaatagacctata 8086410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25298951 - 25299065
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||| | |||||  ||||||||||||||| ||||  ||||| |||| ||||||  |||||||||||    
T  25298951 aattgaattatttaaatttttcgggtgggccactacactaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcg 25299050  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  25299051 caaaatagacctata 25299065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33011920 - 33012034
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  | |  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| |||||| ||||||||||||    
T  33011920 aattgaattatttaaatttttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgcataaaatctcg 33012019  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  33012020 caaaatagacctata 33012034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42372264 - 42372150
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||| ||||||||||||||| |||   |||| | ||| ||||||  |||||||||||    
T  42372264 aattgaattatttaaattttttgggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcg 42372165  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  42372164 caaaatagacctata 42372150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44052322 - 44052436
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| ||||| |||||||| |||||||||||   |||| ||||| ||||||  ||||||||||     
T  44052322 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgagaatttgaatcaaccaaaacctaaaaccgacataaaattctataaaatctca 44052421  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  44052422 caaaatagacctata 44052436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46224623 - 46224737
Alignment:
Q  1 aattgaattatttaaatttttgag-taagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| || |  |||||||||||| |||||  ||||||||||||||| ||||  |||| ||||| ||||||  |||||||||||    
T  46224623 aattgaattatttaaatttttcaggtgggccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcg 46224722  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  46224723 caaaatagatctata 46224737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24790730 - 24790615
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaacc-aaaatacaaaac-gacacaaaattacataaaatctc 97  Q
    ||||||||||||||||||||| |  | ||||||||||||| |||||  ||||||||||||||| ||||   ||||| |||| ||||||  ||||||||||    
T  24790730 aattgaattatttaaatttttcgcttgagccactacaccaatttgcgggaatttggatcaacccaaaacgtaaaaccgacataaaattgtataaaatctc 24790631  T
Q  98 gcaaaatagacctata 113  Q
    ||||||||||||||||    
T  24790630 gcaaaatagacctata 24790615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9246877 - 9246991
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||  ||||||||||| | || |||   ||||| || ||||||||  |||||||||||    
T  9246877 aattgaattatttaaatttttcgagtgggccactacaccactttgtgagaatttggataagccgaaacctaaaaccgatacaaaattgtataaaatctcg 9246976  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  9246977 caaaatagatctata 9246991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16692812 - 16692926
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||||||     
T  16692812 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctca 16692911  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  16692912 caaaatagacctata 16692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37125987 - 37125873
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||  |||||| |||||||| |||   ||||| || | ||||||  |||||||||||    
T  37125987 aattgaattatttaaatttttcgggtgagccactacaccaatttgcgggaattttgatcaaccgaaacctaaaactgatataaaattgtataaaatctcg 37125888  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  37125887 caaaatagacctata 37125873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45837138 - 45837024
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||| ||||||| ||||||| |||   ||||| |||| ||||||  |||||||||||    
T  45837138 aattgaattatttaaatttttcgggtggaccactacaccaatttgcaggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 45837039  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  45837038 caaaatagacctata 45837024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23177636 - 23177522
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  |   | ||||||||||| |||||  ||||||||||||||| ||||  ||||| |||| ||||||  |||||||||||    
T  23177636 aattgaattatttaaatttttcggatggaccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcg 23177537  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  23177536 caaaatagacatata 23177522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24542643 - 24542757
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24542643 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24542742  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24542743 caaaatagacctata 24542757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24542757 - 24542871
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24542757 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24542856  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24542857 caaaatagacctata 24542871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24542871 - 24542985
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24542871 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24542970  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24542971 caaaatagacctata 24542985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24542985 - 24543099
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24542985 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543084  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543085 caaaatagacctata 24543099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543099 - 24543213
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543099 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543198  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543199 caaaatagacctata 24543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543213 - 24543327
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543213 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543312  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543313 caaaatagacctata 24543327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543327 - 24543441
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543327 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543426  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543427 caaaatagacctata 24543441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543441 - 24543555
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543441 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543540  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543541 caaaatagacctata 24543555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543555 - 24543669
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543555 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543654  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543655 caaaatagacctata 24543669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543669 - 24543783
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543669 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543768  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543769 caaaatagacctata 24543783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543783 - 24543897
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543783 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543882  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543883 caaaatagacctata 24543897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24543897 - 24544011
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24543897 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24543996  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24543997 caaaatagacctata 24544011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544011 - 24544125
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544011 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544110  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544111 caaaatagacctata 24544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544125 - 24544239
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544125 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544224  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544225 caaaatagacctata 24544239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544239 - 24544353
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544239 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544338  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544339 caaaatagacctata 24544353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544353 - 24544467
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544353 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544452  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544453 caaaatagacctata 24544467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544467 - 24544581
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544467 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544566  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544567 caaaatagacctata 24544581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24544581 - 24544695
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||| ||     
T  24544581 aattgaattatttaaatttttcgggtgtgccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttca 24544680  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  24544681 caaaatagacctata 24544695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40428644 - 40428758
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||| ||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  40428644 aattgaattattttaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 40428743  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  40428744 caaaatagaactata 40428758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 47562021 - 47561907
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  ||||||| |||    
T  47562021 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcg 47561922  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  47561921 caaaatagacctata 47561907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 51139980 - 51139866
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  | |||||||||    
T  51139980 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtaaaaaatctcg 51139881  T
Q  99 caaaatagacctata 113  Q
    ||||||| |||||||    
T  51139880 caaaataaacctata 51139866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 21852154 - 21852069
Alignment:
Q  28 gccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgcaaaatagacctat 112  Q
    |||||||||||||||| ||| |||||||||||| | ||||  ||||| |||||||||||  ||||||||||||||| || ||||||    
T  21852154 gccactacaccactttacaaaaatttggatcaatcgaaatctaaaacggacacaaaattgtataaaatctcgcaaagtatacctat 21852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29981570 - 29981684
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||| ||||||||||| | ||   |||||| |||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  29981570 aattgaattgtttaaatttttcgggtggaccactataccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcg 29981669  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  29981670 caaaatagacctata 29981684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32540570 - 32540687
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||| ||||||||||||     |||||||| |||| |||   ||||| |||||||||||  |||||||||||    
T  32540570 aattgaattatttaaatttttcgggtgggccattacaccactttgtggatatttggataaaccgaaacctaaaaccgacacaaaattgtataaaatctcg 32540669  T
Q  99 caaaatagacctatagtc 116  Q
     |||||||||||||||||    
T  32540670 taaaatagacctatagtc 32540687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 8530126 - 8530081
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactgt 182  Q
    ||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  8530126 gggtgggccgtggcccaccccagcccatgaagggctccgccactgt 8530081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 9247014 - 9247058
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||| ||||||||||||||| |||||| |||||| ||||||    
T  9247014 gggtgggttgtggcccacctcagcccatgaagggctccaccactg 9247058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7021998 - 7021879
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  7021998 aattgaattatttaaattttcgggtgggccactacatcactttgcaggaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgc 7021899  T
Q  100 aaaatagacctatagtcatt 119  Q
    |||||||||||||| |||||    
T  7021898 aaaatagacctataatcatt 7021879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 2660816 - 2660997
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||| |||||| | |||| ||| |||||||| |||||||||||||    
T  2660816 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcatccaaaacataaaaccgatacaaaattgcataaaatctcgc 2660915  T
Q  100 aaaatagacctatagtcattgannnnnnnnnnnnnctgggtgggtcgtggcccacctcagctcatgaaaggctccgccactg 181  Q
    |||||||||||||| || ||||             | ||||||||||||||||| | |||| |||||| |||||||||||||    
T  2660916 aaaatagacctataatcgttgattttttaatttttccgggtgggtcgtggcccatcccagcccatgaagggctccgccactg 2660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9079033 - 9079146
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  9079033 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 9079132  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  9079133 aaattagacctata 9079146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12698675 - 12698562
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||  ||||||||||||    
T  12698675 aattgaattatttaaattttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgc 12698576  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  12698575 aaaatagacctata 12698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26468629 - 26468516
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||| |||| || |||| ||||||||||||  ||||||||||||    
T  26468629 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaagcaaattataaaaccgacacaaaattgtataaaatctcgc 26468530  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  26468529 aaaatagacctata 26468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15469270 - 15469157
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||| ||||| | ||||| ||||||||||| |||||||||| ||    
T  15469270 aattgaattatttaaattttcgggtggaccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgc 15469171  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  15469170 aaaatagacctata 15469157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34023520 - 34023633
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  | |||||||||||||||||  ||||| |||||||||||| | |||| ||||||||||||| |||||||||||     
T  34023520 aattgaattatttaaatttttgggtgggacactacaccactttgcagaaatttagatcaaccaaaacataaaaccgacacaaaattatataaaatctcgt 34023619  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  34023620 aaaatagacctata 34023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24130222 - 24130326
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  24130222 aattgaattatttaaattttcgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 24130321  T
Q  100 aaaat 104  Q
    |||||    
T  24130322 aaaat 24130326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11450482 - 11450589
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||| |||||||    
T  11450482 aattgaattatttaaattttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataagatctcgc 11450581  T
Q  100 aaaataga 107  Q
    ||||||||    
T  11450582 aaaataga 11450589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16461387 - 16461493
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| ||||   ||||||||| |||||| | ||||||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  16461387 aattgaattatttaaattttcgagtggaccactacacaactttgaaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 16461486  T
Q  100 aaaatag 106  Q
    |||||||    
T  16461487 aaaatag 16461493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8560606 - 8560493
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| | | |||||||| |||||||||||||    
T  8560606 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgc 8560507  T
Q  100 aaaatagacctata 113  Q
    ||  ||||||||||    
T  8560506 aatttagacctata 8560493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24635448 - 24635561
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |   |||||||||||||||||| ||||||||||||||||||| | |||| | | |||||||| |||||||||||||    
T  24635448 aattgaattatttaaattttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgc 24635547  T
Q  100 aaaatagacctata 113  Q
    ||| ||||||||||    
T  24635548 aaattagacctata 24635561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34127678 - 34127565
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  | || |||||||||||||| ||||||||||||||||||  | |||| ||| ||||||||  ||||||||||||    
T  34127678 aattgaattatttaaatttttgggtggggcattacaccactttgcaggaatttggatcaaccaaatcataaaaccgatacaaaattgtataaaatctcgc 34127579  T
Q  100 aaaatagacctata 113  Q
    ||||||||| ||||    
T  34127578 aaaatagacttata 34127565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7022111 - 7021998
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||| ||||   ||||||||||||||| |||   |||| ||||| ||||||  ||||||||||||    
T  7022111 aattgaattatttaaattttcgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgc 7022012  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  7022011 aaaatagacctata 7021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2660702 - 2660816
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  2660702 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcg 2660801  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  2660802 caaaatagacctata 2660816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26468743 - 26468629
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| |||||  ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  26468743 aattgaattatttaaatttttcggtttgtccactacaccaatttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcg 26468644  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  26468643 caaaatagacctata 26468629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34127792 - 34127678
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||  | ||  |||||||||||| |||||| ||||||||||||||| |||   |||| ||||| ||||||  ||||||||| |    
T  34127792 aattgaattatttaaattttccgggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatcttg 34127693  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  34127692 caaaatagacctata 34127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11450369 - 11450478
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  |||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||     
T  11450369 aattgaattatttaaattttcgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgt 11450468  T
Q  100 aaaatagacc 109  Q
    ||||||||||    
T  11450469 aaaatagacc 11450478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23259046 - 23259147
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||||| ||  ||||||||| || ||||||  |||||| ||||||||||| | |||| ||| | |||||| |||||||||||||    
T  23259046 aattgaattatttaaatttttgggtgggccactacaacattttgcagaaatttgaatcaaccaaaacataaaaccgatagaaaattgcataaaatctcgc 23259145  T
Q  100 aa 101  Q
    ||    
T  23259146 aa 23259147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 14883142 - 14883253
Alignment:
Q  4 tgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgaca-caaaattacataaaatctcgcaa 101  Q
    ||||||||||||||||||  ||  ||||||||||||||||||  ||||||||||||||| |||   |||| ||||| |||||||  |||||||||||| |    
T  14883142 tgaattatttaaattttttggtgggccactacaccactttgcgggaatttggatcaaccgaaacctaaaatcgacaccaaaattgtataaaatctcgcga 14883241  T
Q  102 aatagacctata 113  Q
    ||||||| ||||    
T  14883242 aatagacttata 14883253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23258818 - 23258932
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| ||||||  ||||||||||||||||||   |||| ||||  ||||||  ||||||||||     
T  23258818 aattgaattatttaaatttttcggttggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctca 23258917  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  23258918 caaaatagacctata 23258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23258932 - 23259046
Alignment:
Q  1 aattgaattatttaaatttttgagtaag-ccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    |||||||||||||||||||||  ||  | ||||||||||| ||||||  ||||||||||||||||||   |||| ||||  ||||||  ||||||||||     
T  23258932 aattgaattatttaaatttttcggttggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctca 23259031  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  23259032 caaaatagacctata 23259046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12996579 - 12996466
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| |  |   |||||||||||||||||  |||||||||| |||| |||   ||||| |||| ||||||  ||||||||||||    
T  12996579 aattgaattatttaaattttcggatggaccactacaccactttgcgggaatttggattaaccgaaacctaaaaccgacataaaattgtataaaatctcgc 12996480  T
Q  100 aaaatagacctata 113  Q
    |||||||| |||||    
T  12996479 aaaatagatctata 12996466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12698788 - 12698678
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  ||||||||||     
T  12698788 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaagcgacataaaattgtataaaatctca 12698689  T
Q  99 caaaatagacc 109  Q
    |||||||||||    
T  12698688 caaaatagacc 12698678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15469383 - 15469270
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||||  ||||| |||| |||| |||   ||||| |||| ||||||  |||||||||||    
T  15469383 aattgaattatttaaatttttcgggtgggccactacaccaatttgcgggaattgggat-aaccgaaacctaaaaccgacataaaattgtataaaatctcg 15469285  T
Q  99 caaaatagacctata 113  Q
    |||||||||||||||    
T  15469284 caaaatagacctata 15469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 13405415 - 13405454
Alignment:
Q  74 cgacacaaaattacataaaatctcgcaaaatagacctata 113  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  13405415 cgacacaaaattgtataaaatctcgcaaaatagacctata 13405454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 31489973 - 31489894
Alignment:
Q  30 cactacaccactttgcaagaatttggatcaaccaaaa-tacaaaacgacacaaaattacataaaatctcgcaaaatagac 108  Q
    |||||||||||||||  ||||||||||| ||| |||| |  ||| ||| ||||||||| |||||||||| ||||||||||    
T  31489973 cactacaccactttgtgagaatttggattaactaaaacttaaaatcgatacaaaattatataaaatctcacaaaatagac 31489894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34023406 - 34023520
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||    |||||||||| |||||  ||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  34023406 aattgaattatttaaatttttcgggtggttcactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 34023505  T
Q  99 caaaatagacctata 113  Q
     |||||||| |||||    
T  34023506 taaaatagatctata 34023520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1284 - 1163
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||||||||||     
T  1284 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcga 1185  T
Q  100 aaaatagacctatagtcattga 121  Q
    ||| ||||||||||||| ||||    
T  1184 aaagtagacctatagtcgttga 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1398 - 1284
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||   ||||||||||| ||||| |||||||||||||||| |||   |||| ||||| ||||||  |||||||||||    
T  1398 aattgaattatttaaatttttcgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 1299  T
Q  99 caaaatagacctata 113  Q
    |||||||||| ||||    
T  1298 caaaatagacatata 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19226 - 19114
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||| |||||||| | |||| |||||||||||| |||||||||||||    
T  19226 aattgaattatttaaattttcgggtgggccactacaccactttgcaggaatttggataaaccaaaacataaaaccgacacaaaattgcataaaatctcgc 19127  T
Q  100 aaaatagacctat 112  Q
    |||||||||||||    
T  19126 aaaatagacctat 19114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19340 - 19226
Alignment:
Q  1 aattgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaac-gacacaaaattacataaaatctcg 98  Q
    ||||||||||||||||||||| | ||  |||||||||||| |||    ||||||||||||||| |||   ||||| |||| ||||||  |||||||||||    
T  19340 aattgaattatttaaatttttcgggtgggccactacaccaattttttggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcg 19241  T
Q  99 caaaatagacctata 113  Q
    ||||||||| |||||    
T  19240 caaaatagatctata 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11358 - 11253
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    ||||||||||||||||||||||  |  ||||||| ||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||||||    
T  11358 aattgaattatttaaatttttggatgggccactataccactttgcacgaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgc 11259  T
Q  100 aaaata 105  Q
    ||||||    
T  11258 aaaata 11253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 11210 - 11165
Alignment:
Q  137 gggtgggtcgtggcccacctcagctcatgaaaggctccgccactgt 182  Q
    ||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  11210 gggtgggccgtggcccaccccagcccatgaagggctccgccactgt 11165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 331952 - 331839
Alignment:
Q  1 aattgaattatttaaatttttgagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgc 99  Q
    |||||||||||||||||||| | ||   | |||||||||||||||| ||||||||||||||||||| | |||| ||| |||||||| |||||||||| ||    
T  331952 aattgaattatttaaattttcgggtggactactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgc 331853  T
Q  100 aaaatagacctata 113  Q
    ||||||||||||||    
T  331852 aaaatagacctata 331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 332064 - 331952
Alignment:
Q  3 ttgaattatttaaattttt-gagtaagccactacaccactttgcaagaatttggatcaaccaaaatacaaaa-cgacacaaaattacataaaatctcgca 100  Q
    ||||||||||||||||||| | ||   ||||||||||| ||||| |||||||||||||||| |||   |||| ||||| ||||||  |||||||||||||    
T  332064 ttgaattatttaaattttttgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgca 331965  T
Q  101 aaatagacctata 113  Q
    ||||||| |||||    
T  331964 aaatagatctata 331952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University