View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6907_low_10 (Length: 304)

Name: NF6907_low_10
Description: NF6907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6907_low_10
NF6907_low_10
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-233)||(46274-46498)
[»] chr8 (53 HSPs)
chr8 (10-233)||(15961132-15961356)
chr8 (10-233)||(30473889-30474113)
chr8 (10-233)||(6299025-6299249)
chr8 (10-233)||(10477937-10478161)
chr8 (10-229)||(18997700-18997920)
chr8 (10-233)||(32110866-32111090)
chr8 (10-233)||(44832191-44832415)
chr8 (10-233)||(995820-996044)
chr8 (10-233)||(18175381-18175605)
chr8 (10-233)||(11725190-11725414)
chr8 (14-231)||(28582859-28583077)
chr8 (10-233)||(11142461-11142691)
chr8 (10-214)||(39257443-39257648)
chr8 (10-233)||(18568865-18569089)
chr8 (10-233)||(18841904-18842128)
chr8 (10-233)||(28274220-28274443)
chr8 (10-215)||(40026800-40027006)
chr8 (21-233)||(35122327-35122540)
chr8 (10-233)||(24408876-24409100)
chr8 (10-232)||(44836909-44837132)
chr8 (49-231)||(39997730-39997913)
chr8 (10-206)||(18210656-18210853)
chr8 (10-189)||(19240663-19240843)
chr8 (10-189)||(19313847-19314027)
chr8 (10-199)||(19412831-19413022)
chr8 (10-186)||(24004779-24004956)
chr8 (10-128)||(23353688-23353806)
chr8 (10-206)||(25875322-25875528)
chr8 (10-70)||(18481929-18481989)
chr8 (180-233)||(23353627-23353680)
chr8 (173-229)||(405363-405419)
chr8 (191-233)||(19241008-19241050)
chr8 (191-233)||(19314192-19314234)
chr8 (10-56)||(39997662-39997708)
chr8 (11-56)||(6299290-6299335)
chr8 (11-56)||(10477851-10477896)
chr8 (11-56)||(11142379-11142424)
chr8 (11-56)||(11725104-11725149)
chr8 (11-56)||(18175295-18175340)
chr8 (11-56)||(18997614-18997659)
chr8 (11-56)||(19240578-19240623)
chr8 (11-56)||(19313762-19313807)
chr8 (11-56)||(19412750-19412795)
chr8 (11-56)||(23353846-23353891)
chr8 (11-56)||(24408793-24408838)
chr8 (11-56)||(30474153-30474198)
chr8 (11-56)||(32111131-32111176)
chr8 (11-56)||(35122585-35122630)
chr8 (11-56)||(39997578-39997623)
chr8 (11-56)||(44832457-44832502)
chr8 (11-56)||(44836822-44836867)
chr8 (173-229)||(17695597-17695653)
chr8 (173-229)||(44831143-44831199)
[»] chr7 (35 HSPs)
chr7 (10-233)||(21804577-21804801)
chr7 (10-233)||(38163344-38163568)
chr7 (10-233)||(42242159-42242383)
chr7 (10-233)||(3840646-3840870)
chr7 (10-233)||(33916952-33917176)
chr7 (10-233)||(27138533-27138757)
chr7 (10-233)||(31373456-31373680)
chr7 (10-233)||(21341823-21342047)
chr7 (10-233)||(21669981-21670205)
chr7 (10-233)||(17178242-17178467)
chr7 (10-233)||(16376550-16376774)
chr7 (10-233)||(40968891-40969115)
chr7 (10-233)||(13786170-13786394)
chr7 (10-233)||(21656628-21656852)
chr7 (10-233)||(43933549-43933773)
chr7 (10-224)||(24924079-24924294)
chr7 (10-233)||(15109670-15109894)
chr7 (10-233)||(27903422-27903646)
chr7 (10-206)||(21753524-21753721)
chr7 (49-214)||(39030276-39030442)
chr7 (10-58)||(31096700-31096748)
chr7 (178-229)||(31097881-31097932)
chr7 (11-56)||(15109930-15109975)
chr7 (11-56)||(3840912-3840957)
chr7 (11-56)||(16376812-16376857)
chr7 (11-56)||(17178508-17178553)
chr7 (11-56)||(21341735-21341780)
chr7 (11-56)||(21656545-21656590)
chr7 (11-56)||(21669893-21669938)
chr7 (11-56)||(21804842-21804887)
chr7 (11-56)||(27138798-27138843)
chr7 (11-56)||(31373368-31373413)
chr7 (173-226)||(32661033-32661086)
chr7 (11-56)||(33917217-33917262)
chr7 (11-56)||(42242424-42242469)
[»] chr6 (31 HSPs)
chr6 (10-233)||(12597270-12597494)
chr6 (10-233)||(19997665-19997889)
chr6 (10-233)||(33645942-33646166)
chr6 (10-233)||(28099602-28099826)
chr6 (10-233)||(2266768-2267000)
chr6 (14-231)||(13533771-13533989)
chr6 (10-233)||(3592893-3593117)
chr6 (10-233)||(17202432-17202656)
chr6 (10-233)||(10584733-10584957)
chr6 (10-233)||(15044722-15044946)
chr6 (10-233)||(2005428-2005652)
chr6 (10-136)||(8539600-8539726)
chr6 (10-171)||(17594816-17594979)
chr6 (10-137)||(25448749-25448876)
chr6 (114-231)||(1405570-1405688)
chr6 (100-202)||(33035523-33035626)
chr6 (179-233)||(8539723-8539777)
chr6 (173-227)||(6300720-6300774)
chr6 (173-227)||(6307530-6307584)
chr6 (173-229)||(8657073-8657129)
chr6 (11-56)||(25448663-25448708)
chr6 (197-233)||(162674-162710)
chr6 (10-56)||(10584996-10585042)
chr6 (11-56)||(2266682-2266727)
chr6 (11-56)||(12597535-12597580)
chr6 (11-56)||(15044637-15044682)
chr6 (11-56)||(17202346-17202391)
chr6 (11-56)||(17594731-17594776)
chr6 (11-56)||(19997578-19997623)
chr6 (11-56)||(28099868-28099913)
chr6 (11-56)||(33645856-33645901)
[»] chr5 (42 HSPs)
chr5 (10-233)||(20874688-20874912)
chr5 (10-233)||(34107343-34107567)
chr5 (10-233)||(34110652-34110876)
chr5 (10-233)||(38246870-38247094)
chr5 (10-233)||(10729447-10729671)
chr5 (10-233)||(16526311-16526535)
chr5 (10-233)||(2398947-2399169)
chr5 (10-233)||(17373166-17373393)
chr5 (10-233)||(20655054-20655278)
chr5 (10-236)||(1395989-1396216)
chr5 (10-203)||(33570342-33570536)
chr5 (10-233)||(33375762-33375988)
chr5 (10-191)||(14141154-14141336)
chr5 (10-233)||(5479196-5479420)
chr5 (10-229)||(25099245-25099465)
chr5 (10-229)||(25158335-25158555)
chr5 (13-199)||(27647933-27648120)
chr5 (10-220)||(24223182-24223393)
chr5 (10-202)||(29275624-29275817)
chr5 (10-196)||(6940545-6940732)
chr5 (89-233)||(40177120-40177265)
chr5 (10-183)||(1394541-1394715)
chr5 (10-175)||(17913741-17913907)
chr5 (173-233)||(8179758-8179818)
chr5 (173-229)||(30096285-30096341)
chr5 (173-229)||(30088711-30088767)
chr5 (11-56)||(1395905-1395950)
chr5 (11-56)||(2399210-2399255)
chr5 (11-56)||(5479113-5479158)
chr5 (11-56)||(6940768-6940813)
chr5 (11-56)||(10729712-10729757)
chr5 (11-56)||(14141377-14141422)
chr5 (11-56)||(16526577-16526622)
chr5 (11-56)||(17373434-17373479)
chr5 (11-56)||(20874602-20874647)
chr5 (11-56)||(24223434-24223479)
chr5 (11-56)||(27647843-27647888)
chr5 (11-56)||(33570578-33570623)
chr5 (11-56)||(34107608-34107653)
chr5 (11-56)||(34110564-34110609)
chr5 (11-56)||(38247135-38247180)
chr5 (11-56)||(40177031-40177076)
[»] chr4 (42 HSPs)
chr4 (10-233)||(52434624-52434848)
chr4 (10-233)||(16917893-16918117)
chr4 (10-233)||(30824927-30825151)
chr4 (10-227)||(53143273-53143491)
chr4 (10-233)||(37651666-37651890)
chr4 (10-233)||(12090464-12090689)
chr4 (14-233)||(16904957-16905177)
chr4 (10-233)||(31965974-31966198)
chr4 (10-233)||(33139476-33139700)
chr4 (10-233)||(46256034-46256258)
chr4 (10-229)||(44376088-44376308)
chr4 (10-233)||(37590809-37591033)
chr4 (14-231)||(35760585-35760803)
chr4 (10-233)||(41387126-41387350)
chr4 (10-233)||(48118539-48118760)
chr4 (10-233)||(45976995-45977219)
chr4 (10-233)||(47142805-47143029)
chr4 (10-231)||(39058364-39058586)
chr4 (10-215)||(31628510-31628716)
chr4 (10-214)||(52098214-52098420)
chr4 (10-189)||(45782478-45782658)
chr4 (10-215)||(54624957-54625156)
chr4 (10-176)||(50229768-50229936)
chr4 (145-198)||(50229712-50229766)
chr4 (85-132)||(34684603-34684650)
chr4 (197-233)||(18209699-18209735)
chr4 (173-233)||(35903633-35903693)
chr4 (179-229)||(19745228-19745278)
chr4 (179-229)||(19794528-19794578)
chr4 (11-56)||(12090730-12090775)
chr4 (11-56)||(16905218-16905263)
chr4 (11-56)||(16918158-16918203)
chr4 (11-56)||(30825192-30825237)
chr4 (11-56)||(31966239-31966284)
chr4 (11-56)||(39058622-39058667)
chr4 (11-56)||(45977264-45977309)
chr4 (11-56)||(47143070-47143115)
chr4 (11-56)||(48118802-48118847)
chr4 (11-56)||(52098460-52098505)
chr4 (11-56)||(52434538-52434583)
chr4 (11-56)||(53143534-53143579)
chr4 (11-56)||(54624877-54624922)
[»] chr3 (39 HSPs)
chr3 (10-233)||(12264200-12264424)
chr3 (10-233)||(38653932-38654156)
chr3 (10-233)||(43363616-43363840)
chr3 (10-233)||(49672562-49672786)
chr3 (10-233)||(1941725-1941949)
chr3 (10-233)||(21098304-21098528)
chr3 (10-233)||(34121355-34121579)
chr3 (10-233)||(3898422-3898646)
chr3 (10-233)||(49506354-49506578)
chr3 (10-233)||(54073027-54073254)
chr3 (10-233)||(26948798-26949022)
chr3 (10-233)||(4584439-4584663)
chr3 (10-233)||(20671249-20671473)
chr3 (10-233)||(31488411-31488635)
chr3 (10-233)||(36076459-36076683)
chr3 (10-233)||(39146440-39146664)
chr3 (10-233)||(45557889-45558113)
chr3 (10-233)||(49478208-49478432)
chr3 (10-233)||(55041588-55041818)
chr3 (55-233)||(40014658-40014837)
chr3 (10-196)||(24119207-24119394)
chr3 (85-206)||(26051334-26051457)
chr3 (133-233)||(6460173-6460273)
chr3 (10-77)||(26052240-26052307)
chr3 (178-229)||(37099713-37099764)
chr3 (11-56)||(1941990-1942035)
chr3 (11-56)||(3898336-3898381)
chr3 (11-56)||(12264113-12264158)
chr3 (11-56)||(20671164-20671209)
chr3 (11-56)||(21098217-21098262)
chr3 (11-56)||(26052349-26052394)
chr3 (11-56)||(26948687-26948732)
chr3 (11-56)||(31488327-31488372)
chr3 (11-56)||(34121269-34121314)
chr3 (11-56)||(38654198-38654243)
chr3 (11-56)||(43363881-43363926)
chr3 (11-56)||(49478122-49478167)
chr3 (11-56)||(49672476-49672521)
chr3 (11-56)||(55041858-55041903)
[»] chr2 (29 HSPs)
chr2 (10-233)||(41664510-41664734)
chr2 (10-233)||(6120552-6120776)
chr2 (10-233)||(18351551-18351775)
chr2 (10-233)||(41663237-41663461)
chr2 (10-233)||(44902082-44902305)
chr2 (10-233)||(19596368-19596592)
chr2 (12-233)||(20544827-20545049)
chr2 (10-233)||(8700261-8700485)
chr2 (10-233)||(31424009-31424233)
chr2 (10-233)||(42441960-42442188)
chr2 (10-233)||(26231264-26231488)
chr2 (10-233)||(36279460-36279683)
chr2 (10-233)||(42055199-42055423)
chr2 (86-233)||(27944801-27944949)
chr2 (10-205)||(34007742-34007938)
chr2 (10-207)||(999262-999460)
chr2 (10-197)||(16214824-16215012)
chr2 (85-213)||(692227-692356)
chr2 (178-229)||(31572450-31572501)
chr2 (11-56)||(19596634-19596679)
chr2 (179-233)||(25889044-25889097)
chr2 (11-56)||(6120465-6120510)
chr2 (11-56)||(16214739-16214784)
chr2 (11-56)||(18351465-18351510)
chr2 (11-56)||(26231527-26231572)
chr2 (11-56)||(31423922-31423967)
chr2 (11-56)||(34007980-34008025)
chr2 (11-56)||(41663150-41663195)
chr2 (11-56)||(42441874-42441919)
[»] chr1 (41 HSPs)
chr1 (10-233)||(4266381-4266605)
chr1 (10-233)||(34888691-34888915)
chr1 (10-233)||(38913752-38913976)
chr1 (10-233)||(2951371-2951595)
chr1 (10-214)||(50151060-50151265)
chr1 (27-233)||(1231813-1232020)
chr1 (10-233)||(9216031-9216255)
chr1 (10-236)||(35614067-35614294)
chr1 (10-233)||(23482712-23482936)
chr1 (10-233)||(7333944-7334168)
chr1 (10-233)||(18706514-18706737)
chr1 (10-233)||(38444631-38444855)
chr1 (85-233)||(31018205-31018354)
chr1 (85-233)||(50326076-50326225)
chr1 (12-233)||(52687119-52687340)
chr1 (10-233)||(18855238-18855461)
chr1 (10-198)||(39727980-39728169)
chr1 (12-199)||(35614818-35615005)
chr1 (21-195)||(19764593-19764768)
chr1 (10-144)||(2590335-2590468)
chr1 (10-148)||(19768464-19768602)
chr1 (145-233)||(29942153-29942242)
chr1 (122-205)||(5061335-5061419)
chr1 (233-289)||(32360504-32360560)
chr1 (233-286)||(32360317-32360370)
chr1 (173-229)||(29387896-29387952)
chr1 (191-229)||(52957058-52957096)
chr1 (173-229)||(28947463-28947519)
chr1 (195-233)||(2590466-2590504)
chr1 (177-223)||(14009849-14009895)
chr1 (11-56)||(1231723-1231768)
chr1 (11-56)||(2951636-2951681)
chr1 (11-56)||(4266295-4266340)
chr1 (11-56)||(18706773-18706818)
chr1 (11-56)||(19764814-19764859)
chr1 (11-56)||(19768380-19768425)
chr1 (11-56)||(23482972-23483017)
chr1 (11-56)||(35613982-35614027)
chr1 (11-56)||(35614732-35614777)
chr1 (11-56)||(38914017-38914062)
chr1 (11-56)||(52036310-52036355)
[»] scaffold0022 (2 HSPs)
scaffold0022 (10-233)||(149055-149279)
scaffold0022 (11-56)||(149318-149363)
[»] scaffold0173 (1 HSPs)
scaffold0173 (10-233)||(19347-19571)
[»] scaffold0836 (1 HSPs)
scaffold0836 (87-233)||(5283-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (87-231)||(6068-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (87-231)||(6078-6223)
[»] scaffold0896 (1 HSPs)
scaffold0896 (173-229)||(1081-1137)


Alignment Details
Target: scaffold0031 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 46274 - 46498
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  46274 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 46373  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46374 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 46473  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  46474 ccgtgcggcagcacgggtggaaagt 46498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 15961132 - 15961356
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  15961132 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 15961231  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15961232 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 15961331  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  15961332 ccgtgcggcagcacgggtggaaagt 15961356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 30474113 - 30473889
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  30474113 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 30474014  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30474013 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 30473914  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  30473913 ccgtgcggcagcacgggtggaaagt 30473889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 6299249 - 6299025
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  6299249 aataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 6299150  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6299149 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 6299050  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  6299049 ccgtgcggcagcacgggtggaaagt 6299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 10477937 - 10478161
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  10477937 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 10478036  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  10478037 tcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 10478136  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  10478137 ccgtgcggcagcacgggtggaaagt 10478161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 18997700 - 18997920
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  18997700 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 18997799  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18997800 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 18997899  T
Q  209 ccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||    
T  18997900 ccgtgcggcagcacgggtgga 18997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 32111090 - 32110866
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  32111090 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 32110991  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  32110990 tcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 32110891  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  32110890 ccgtgcggcagcacgggtggaaagt 32110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 44832415 - 44832191
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  44832415 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 44832316  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44832315 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 44832216  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||| ||||||||||||||    
T  44832215 ccgtgcggcaacacgggtggaaagt 44832191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 996044 - 995820
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||       |||||||||||||||||||||||||    
T  996044 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgaggt 995945  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  995944 tcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 995845  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  995844 ccgtgcggcagcacgggtggaaagt 995820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 18175381 - 18175605
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||       |||||||||| ||||||||||||||    
T  18175381 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgaggt 18175480  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  18175481 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 18175580  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  18175581 ccgtgcggcagcacgggtggaaagt 18175605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 11725190 - 11725414
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  11725190 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 11725289  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  11725290 tcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 11725389  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||| ||||||||||||||||||    
T  11725390 ccgtgcagcagcacgggtggaaagt 11725414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 28582859 - 28583077
Alignment:
Q  14 atataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 28583058  T
Q  213 gcggcagcacgggtggaaa 231  Q
    |||||||||||||||||||    
T  28583059 gcggcagcacgggtggaaa 28583077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 11142461 - 11142691
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtc 103  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||      |||||       |||||||||| ||||||||    
T  11142461 aataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtc 11142560  T
Q  104 tgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgta 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  11142561 tgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgta 11142660  T
Q  203 tatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||||||||    
T  11142661 tatgatccgtgcggcagcacgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 39257443 - 39257648
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  39257443 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 39257542  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  39257543 tcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 39257642  T
Q  209 ccgtgc 214  Q
    ||||||    
T  39257643 ccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 18568865 - 18569089
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       | |||||||| ||||||| ||||||    
T  18568865 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggt 18568964  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||     
T  18568965 tcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgac 18569064  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||| ||||||||||||||||    
T  18569065 ccgtgcggtagcacgggtggaaagt 18569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 18841904 - 18842128
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||       |||||||||| |||||||||||| |    
T  18841904 aataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagat 18842003  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||     
T  18842004 tcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgac 18842103  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||| |||||||||||||    
T  18842104 ccgtgcggcagaacgggtggaaagt 18842128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 28274443 - 28274220
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||    
T  28274443 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggt 28274344  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  28274343 tcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatgat 28274244  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||| || |||||| ||||||||    
T  28274243 ccgtgc-gccgcacggatggaaagt 28274220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 215
Target Start/End: Original strand, 40026800 - 40027006
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  40026800 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 40026899  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  40026900 tcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 40026999  T
Q  209 ccgtgcg 215  Q
    |||||||    
T  40027000 ccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 35122540 - 35122327
Alignment:
Q  21 attgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       |||||||||| |||||||||||| ||||||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  121 catctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 219  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcgacag 35122341  T
Q  220 cacgggtggaaagt 233  Q
    || |||||||||||    
T  35122340 caggggtggaaagt 35122327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 24408876 - 24409100
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||| ||| ||    
T  24408876 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgt 24408975  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||| ||||||| |||||||||||||||||     
T  24408976 tcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatgac 24409075  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||| ||||||| ||||||    
T  24409076 ccgtgcggcaacacgggtagaaagt 24409100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 44836909 - 44837132
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||| ||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||||||||||||||||||    
T  44836909 aataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggt 44837008  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||||||| ||||||||||||| ||||||||||||||| |     
T  44837009 tcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatataac 44837108  T
Q  209 ccgtgcggcagcacgggtggaaag 232  Q
    ||||||||||||||||||||||||    
T  44837109 ccgtgcggcagcacgggtggaaag 44837132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 39997730 - 39997913
Alignment:
Q  49 aagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatt 148  Q
    |||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39997730 aagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccacatatt 39997829  T
Q  149 tcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaa 231  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39997830 tcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 39997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 18210853 - 18210656
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||||| |||||||||||||  || ||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  18210853 aataatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 18210754  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 206  Q
    || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18210753 tcaaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 19240663 - 19240843
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||        ||||||||| ||||||||||||||    
T  19240663 aataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggt 19240762  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctacta 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19240763 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 19313847 - 19314027
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||        ||||||||| ||||||||||||||    
T  19313847 aataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggt 19313946  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctacta 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19313947 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 19412831 - 19413022
Alignment:
Q  10 aataatataatattgacatataattttaacaaaa-gaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgagg 108  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||       |||||||||  |||||||||||||    
T  19412831 aataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgagg 19412930  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  19412931 ttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 24004956 - 24004779
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||    
T  24004956 aataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 24004857  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtcta 186  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||    
T  24004856 tcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 23353806 - 23353688
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||| | ||||||||||||    
T  23353806 aataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggt 23353707  T
Q  110 tcgaattccaacatctgca 128  Q
    |||||||||||||||||||    
T  23353706 tcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 25875528 - 25875322
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggt--------- 100  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||  |             
T  25875528 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctcttt 25875429  T
Q  101 -----gtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttga-tatgcattgagatttgtttttgtctactatatct 194  Q
         ||||||||||||||||||| ||||||||||     |||| ||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  25875428 aatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatatct 25875334  T
Q  195 acaatgtatatg 206  Q
    || |||||||||    
T  25875333 acgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 18481989 - 18481929
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaa 70  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18481989 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 23353680 - 23353627
Alignment:
Q  180 ttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  23353680 ttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 23353627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 405419 - 405363
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| ||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  405419 tttgcttttgtctactatacttacaatgtatatgacccgtgcggcagcacgggtgga 405363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 19241008 - 19241050
Alignment:
Q  191 atctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  19241008 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagt 19241050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 19314192 - 19314234
Alignment:
Q  191 atctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  19314192 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagt 19314234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 39997662 - 39997708
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||    
T  39997662 aataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6299335 - 6299290
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  6299335 ataatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 10477851 - 10477896
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  10477851 ataatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 11142379 - 11142424
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  11142379 ataatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 11725104 - 11725149
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  11725104 ataatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 18175295 - 18175340
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  18175295 ataatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 18997614 - 18997659
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  18997614 ataatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19240578 - 19240623
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19240578 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19313762 - 19313807
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19313762 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19412750 - 19412795
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19412750 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23353891 - 23353846
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  23353891 ataatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 24408793 - 24408838
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  24408793 ataatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30474198 - 30474153
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  30474198 ataatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 32111176 - 32111131
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  32111176 ataatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35122630 - 35122585
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  35122630 ataatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 39997578 - 39997623
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  39997578 ataatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 44832502 - 44832457
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  44832502 ataatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 44836822 - 44836867
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  44836822 ataatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 17695597 - 17695653
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||| ||||||| |  |||||||||||| | |||||||||||||||||||||    
T  17695597 tttgcttttatctactacacttacaatgtatattacccgtgcggcagcacgggtgga 17695653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 44831199 - 44831143
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||| ||||||| |  |||||||||||||| ||| |||||||||||||||||    
T  44831199 tttgcttttatctactacacttacaatgtatatgacccgagcggcagcacgggtgga 44831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 21804801 - 21804577
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  21804801 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 21804702  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21804701 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 21804602  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  21804601 ccgtgcggcagcacgggtggaaagt 21804577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 38163568 - 38163344
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  38163568 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 38163469  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38163468 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 38163369  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  38163368 ccgtgcggcagcacgggtggaaagt 38163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 42242383 - 42242159
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  42242383 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 42242284  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42242283 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 42242184  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  42242183 ccgtgcggcagcacgggtggaaagt 42242159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 3840870 - 3840646
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  3840870 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 3840771  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3840770 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 3840671  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  3840670 tcgtgcggcagcacgggtggaaagt 3840646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 33917176 - 33916952
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  33917176 aataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 33917077  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33917076 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 33916977  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  33916976 ccgtgcggcagcacgggtggaaagt 33916952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 27138757 - 27138533
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  27138757 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 27138658  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  27138657 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatgac 27138558  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||||||    
T  27138557 ctgtgcggcagcacgggtggaaagt 27138533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 31373456 - 31373680
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||    
T  31373456 aataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 31373555  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  31373556 tcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgac 31373655  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  31373656 ccgtgcggcagcacgggtggaaagt 31373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 21341823 - 21342047
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  21341823 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 21341922  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  21341923 tcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatgac 21342022  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  21342023 ccgtgcggcagcacgggtggaaagt 21342047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 21669981 - 21670205
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  21669981 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 21670080  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  21670081 tcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 21670180  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||||||    
T  21670181 ctgtgcggcagcacgggtggaaagt 21670205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 17178467 - 17178242
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnn-ggtgaataagcgtggtgtctgagg 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        |||||||||| |||||||||||||    
T  17178467 aataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctgagg 17178368  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17178367 ttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatatga 17178268  T
Q  208 tccgtgcggcagcacgggtggaaagt 233  Q
     || ||||||||||||||||||||||    
T  17178267 cccatgcggcagcacgggtggaaagt 17178242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 16376774 - 16376550
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  16376774 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 16376675  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  16376674 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 16376575  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  16376574 ccgtgcggcagcacgggtggaaagt 16376550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 40968891 - 40969115
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  40968891 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 40968990  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||     
T  40968991 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatgac 40969090  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  40969091 ccgtgcggcagcacgggtggaaagt 40969115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 13786170 - 13786394
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||       |||||||||| ||||||||||||||    
T  13786170 aataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 13786269  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  13786270 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 13786369  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  13786370 ccgtgcggcagcacgggtggaaagt 13786394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 21656628 - 21656852
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  21656628 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 21656727  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||     
T  21656728 tcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatgac 21656827  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    ||||| || ||||||||||||||||    
T  21656828 ccgtgtggtagcacgggtggaaagt 21656852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 43933773 - 43933549
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  43933773 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 43933674  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||     
T  43933673 tcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatgac 43933574  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    || ||||| ||||||||||||||||    
T  43933573 ccttgcggtagcacgggtggaaagt 43933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 24924079 - 24924294
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||    
T  24924079 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggt 24924178  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24924179 tcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 24924278  T
Q  209 ccgtgcggcagcacgg 224  Q
    ||||||||||||||||    
T  24924279 ccgtgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 15109894 - 15109670
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       | |||||||| ||||||||||||||    
T  15109894 aataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggt 15109795  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  15109794 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgtc 15109695  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||  ||||||||||||||||    
T  15109694 cggtgcgatagcacgggtggaaagt 15109670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 27903646 - 27903422
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||       |||||||||| ||||||| ||||||    
T  27903646 aataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggt 27903547  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  27903546 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgac 27903447  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  27903446 ccgtgcggcagcacgggtggaaagt 27903422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 21753721 - 21753524
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||| ||||    
T  21753721 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggt 21753622  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 206  Q
    |||||||  |||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21753621 tcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 39030442 - 39030276
Alignment:
Q  49 aagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatt 148  Q
    |||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39030442 aagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatgtt 39030343  T
Q  149 tcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgc 214  Q
    | |||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  39030342 ttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 31096700 - 31096748
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacaca 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31096700 aataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 31097881 - 31097932
Alignment:
Q  178 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||||    
T  31097881 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 31097932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 15109975 - 15109930
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||    
T  15109975 ataatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 3840957 - 3840912
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  3840957 ataatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 16376857 - 16376812
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| |||||||||||||||| |||||| ||| ||||||||    
T  16376857 ataatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17178553 - 17178508
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  17178553 ataatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21341735 - 21341780
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  21341735 ataatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21656545 - 21656590
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  21656545 ataatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21669893 - 21669938
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  21669893 ataatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 21804887 - 21804842
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  21804887 ataatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 27138843 - 27138798
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  27138843 ataatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31373368 - 31373413
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  31373368 ataatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 32661033 - 32661086
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggt 226  Q
    |||| |||||||||||| |  ||||||||||||||  |||||||||||||||||    
T  32661033 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggt 32661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33917262 - 33917217
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  33917262 ataatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 42242469 - 42242424
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  42242469 ataatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 12597494 - 12597270
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  12597494 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 12597395  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12597394 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 12597295  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  12597294 ccgtgcggcagcacgggtggaaagt 12597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 19997665 - 19997889
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  19997665 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 19997764  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19997765 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 19997864  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  19997865 ccgtgcggcagcacgggtggaaagt 19997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 33645942 - 33646166
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  33645942 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 33646041  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  33646042 tcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 33646141  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  33646142 ccgtgcggcagcacgggtggaaagt 33646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 28099826 - 28099602
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  28099826 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 28099727  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  28099726 tcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgac 28099627  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  28099626 ccgtgcggcagcacgggtggaaagt 28099602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 2266768 - 2267000
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtc------ 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||          
T  2266768 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtggtg 2266867  T
Q  104 --tgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatg 200  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2266868 tctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 2266967  T
Q  201 tatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||| |||||||||||||||||||||||||    
T  2266968 tatatgacccgtgcggcagcacgggtggaaagt 2267000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 13533771 - 13533989
Alignment:
Q  14 atataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 13533970  T
Q  213 gcggcagcacgggtggaaa 231  Q
    |||||||||||||||||||    
T  13533971 gcggcagcacgggtggaaa 13533989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 3592893 - 3593117
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||       |||||||||| ||||||||||||||    
T  3592893 aataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 3592992  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctcttg-atatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||     
T  3592993 tcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 3593092  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  3593093 ccgtgcggcagcacgggtggaaagt 3593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 17202432 - 17202656
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  17202432 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 17202531  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||||||||||     
T  17202532 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatgac 17202631  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
      |||||||||||||||||||||||    
T  17202632 ttgtgcggcagcacgggtggaaagt 17202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 10584957 - 10584733
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| || |||||||||||    
T  10584957 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggt 10584858  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||     
T  10584857 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgac 10584758  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    || |  |||||||||||||||||||    
T  10584757 ccatatggcagcacgggtggaaagt 10584733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 15044722 - 15044946
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  15044722 aataatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 15044821  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||     
T  15044822 tcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgac 15044921  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||||||    
T  15044922 ctgtgcggcagcacgggtggaaagt 15044946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 2005428 - 2005652
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  2005428 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 2005527  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||  |||||||| ||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||     
T  2005528 tcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatgac 2005627  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||| ||||| |||||||||    
T  2005628 ccgtgcggccgcacgagtggaaagt 2005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 8539600 - 8539726
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  8539600 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 8539699  T
Q  110 tcgaattccaacatctgcatatatttg 136  Q
    |||||||||||||||||||||||||||    
T  8539700 tcgaattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 17594816 - 17594979
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgagg 108  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||       |||||||||| ||||||||||| |    
T  17594816 aataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaag 17594915  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgag 171  Q
    || ||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  17594916 tttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 25448749 - 25448876
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||       ||||||||||||||||||||||| |    
T  25448749 aataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgagtt 25448848  T
Q  110 tcgaattccaacatctgcatatatttgg 137  Q
    |||||||||||||||| |||||||||||    
T  25448849 tcgaattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 1405688 - 1405570
Alignment:
Q  114 attccaacatctgcatatatttgggaccacatatttcattctcttga-tatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 212  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  213 gcggcagcacgggtggaaa 231  Q
    |||||||||||||||||||    
T  1405588 gcggcagcacgggtggaaa 1405570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  100 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaa 198  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| ||| |||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  199 tgta 202  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 8539723 - 8539777
Alignment:
Q  179 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  8539723 tttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 8539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 6300774 - 6300720
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 227  Q
    |||||||||| |||||| || |||||||||||||| |||||||||||||||||||    
T  6300774 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtg 6300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 6307584 - 6307530
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 227  Q
    |||||||||| |||||| || |||||||||||||| |||||||||||||||||||    
T  6307584 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtg 6307530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 8657129 - 8657073
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||||||||||| |  |||||||||||||| |||||||||||||||||||||    
T  8657129 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 8657073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 25448663 - 25448708
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||    
T  25448663 ataatataacattaacatataatttttacaaaagaataaagtaaca 25448708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 162710 - 162674
Alignment:
Q  197 aatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||| |||||||||||||||||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagt 162674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 10585042 - 10584996
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    |||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  10585042 aataatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2266682 - 2266727
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  2266682 ataatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 12597580 - 12597535
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  12597580 ataatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 15044637 - 15044682
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  15044637 ataatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17202346 - 17202391
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  17202346 ataatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17594731 - 17594776
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  17594731 ataatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19997578 - 19997623
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19997578 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28099913 - 28099868
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  28099913 ataatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 33645856 - 33645901
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  33645856 ataatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 20874688 - 20874912
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  20874688 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 20874787  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20874788 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 20874887  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  20874888 ccgtgcggcagcacgggtggaaagt 20874912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 34107567 - 34107343
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  34107567 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 34107468  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34107467 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 34107368  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  34107367 ccgtgcggcagcacgggtggaaagt 34107343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 34110652 - 34110876
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  34110652 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 34110751  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34110752 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 34110851  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  34110852 ccgtgcggcagcacgggtggaaagt 34110876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 38247094 - 38246870
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  38247094 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 38246995  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38246994 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 38246895  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  38246894 ccgtgcggcagcacgggtggaaagt 38246870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 10729671 - 10729447
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||       |||||||||||||||||||||||||    
T  10729671 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgaggt 10729572  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  10729571 tcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 10729472  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  10729471 ccgtgcggcagcacgggtggaaagt 10729447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 16526535 - 16526311
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  16526535 aataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 16526436  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16526435 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 16526336  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  16526335 ccgtgcggcagcacgggtggaaagt 16526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 2399169 - 2398947
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||       |||||||||||||||||||||||||    
T  2399169 aataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 2399072  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2399071 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 2398972  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  2398971 ccgtgcggcagcacgggtggaaagt 2398947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 17373393 - 17373166
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  17373393 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 17373294  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatg---tatat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  17373293 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatat 17373194  T
Q  206 gatccgtgcggcagcacgggtggaaagt 233  Q
    || |||||||||||||||||||||||||    
T  17373193 gacccgtgcggcagcacgggtggaaagt 17373166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 20655278 - 20655054
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||       |||||||||| ||||||||||||||    
T  20655278 aataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 20655179  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  20655178 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 20655079  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  20655078 ccgtgcggcagcacgggtggaaagt 20655054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 1395989 - 1396216
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||       |||||||||| ||||||||||||||    
T  1395989 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 1396088  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||     
T  1396089 tcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatgac 1396188  T
Q  209 ccgtgcggcagcacgggtggaaagtata 236  Q
    ||||||||||||||||||||||| ||||    
T  1396189 ccgtgcggcagcacgggtggaaaatata 1396216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 33570536 - 33570342
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  33570536 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 33570437  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33570436 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 33375762 - 33375988
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  33375762 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 33375861  T
Q  110 tcgaattccaacatctgcatatatttgggac--cacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||  ||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33375862 tcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 33375961  T
Q  207 atccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||||||||    
T  33375962 acccgtgcggcagcacgggtggaaagt 33375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 14141336 - 14141154
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  14141336 aataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 14141237  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactata 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14141236 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 5479196 - 5479420
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| || |||||||||||    
T  5479196 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggt 5479295  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||     
T  5479296 tcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgac 5479395  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    ||||||| || ||| |||| |||||    
T  5479396 ccgtgcgacaacacaggtgaaaagt 5479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 25099465 - 25099245
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       || ||||||| |||||| |||||||    
T  25099465 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggt 25099366  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||     
T  25099365 tcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgac 25099266  T
Q  209 ccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||    
T  25099265 ccgtgcggcagcacgggtgga 25099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 25158555 - 25158335
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       || ||||||| |||||| |||||||    
T  25158555 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggt 25158456  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||     
T  25158455 tcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgac 25158356  T
Q  209 ccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||    
T  25158355 ccgtgcggcagcacgggtgga 25158335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 27647933 - 27648120
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  27647933 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 27648032  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaat 199  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  27648033 aattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 24223393 - 24223182
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||| | ||||||||||| ||||||||||||||| |||||||||||||||| |||| | |||||       |||||||||| ||||||||||||||    
T  24223393 aataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggt 24223294  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||     
T  24223293 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatgac 24223194  T
Q  209 ccgtgcggcagc 220  Q
    ||||||||||||    
T  24223193 ccgtgcggcagc 24223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 29275624 - 29275817
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||    
T  29275624 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggt 29275723  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgta 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||    
T  29275724 tcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 6940732 - 6940545
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||       |||||||||| ||||||| ||||||    
T  6940732 aataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggt 6940633  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctac 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  6940632 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 40177120 - 40177265
Alignment:
Q  89 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctac 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  188 tatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  40177220 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 40177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 1394715 - 1394541
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||       |||||| ||| ||||||| ||||||    
T  1394715 aataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggt 1394616  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1394615 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 17913741 - 17913907
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||       |||||||||| ||||| | ||||||    
T  17913741 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggt 17913840  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagattt 175  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  17913841 tcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 8179818 - 8179758
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  8179818 tttgctttggtctactacatctacaatatatatgatccgtgcggcagcacgggtggaaagt 8179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 30096341 - 30096285
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  30096341 tttgcttttgtctacaatacttacaatgtatatgatccgtgcggcagcacgggtgga 30096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 30088767 - 30088711
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||| |||  |||||||||||||| |||||||||||||||| ||||    
T  30088767 tttgtttttgtctacaatacttacaatgtatatgacccgtgcggcagcacggatgga 30088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1395905 - 1395950
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  1395905 ataatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 2399255 - 2399210
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  2399255 ataatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 5479113 - 5479158
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  5479113 ataatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6940813 - 6940768
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  6940813 ataatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 10729757 - 10729712
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  10729757 ataatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 14141422 - 14141377
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  14141422 ataatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 16526622 - 16526577
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  16526622 ataatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17373479 - 17373434
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  17373479 ataatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 20874602 - 20874647
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  20874602 ataatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 24223479 - 24223434
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  24223479 ataatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 27647843 - 27647888
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  27647843 ataatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33570623 - 33570578
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  33570623 ataatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 34107653 - 34107608
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  34107653 ataatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 34110564 - 34110609
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  34110564 ataatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 38247180 - 38247135
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  38247180 ataatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 40177031 - 40177076
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  40177031 ataatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 52434624 - 52434848
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  52434624 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 52434723  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  52434724 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 52434823  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  52434824 ccgtgcggcagcacgggtggaaagt 52434848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 16918117 - 16917893
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  16918117 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 16918018  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16918017 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 16917918  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||| ||||||||||    
T  16917917 ccgtgcggcagcacaggtggaaagt 16917893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 30825151 - 30824927
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  30825151 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 30825052  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  30825051 tcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 30824952  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  30824951 ccgtgcggcagcacgggtggaaagt 30824927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 53143491 - 53143273
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  53143491 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 53143392  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  53143391 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgac 53143292  T
Q  209 ccgtgcggcagcacgggtg 227  Q
    |||||||||||||||||||    
T  53143291 ccgtgcggcagcacgggtg 53143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 37651666 - 37651890
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||| ||||||    
T  37651666 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggt 37651765  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctcttg-atatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||     
T  37651766 tcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 37651865  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  37651866 ccgtgcggcagcacgggtggaaagt 37651890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 12090689 - 12090464
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaa-taaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgagg 108  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||       | ||||||||||||||||||||||    
T  12090689 aataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctgagg 12090590  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatga 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12090589 ttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 12090490  T
Q  208 tccgtgcggcagcacgggtggaaagt 233  Q
     |||||||||||||||||||||||||    
T  12090489 cccgtgcggcagcacgggtggaaagt 12090464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 16905177 - 16904957
Alignment:
Q  14 atataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgt 16904978  T
Q  213 gcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||    
T  16904977 gcggcagcacgggtggaaagt 16904957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 31966198 - 31965974
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  31966198 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 31966099  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| || || |||||||||||||||||     
T  31966098 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatgac 31965999  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  31965998 ccgtgcggcagcacgggtggaaagt 31965974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 33139700 - 33139476
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||  ||||||||||||||    
T  33139700 aataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggt 33139601  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  33139600 tcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatgac 33139501  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  33139500 ccgtgcggcagcacgggtggaaagt 33139476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 46256034 - 46256258
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||       |||||||||| ||||||||||||||    
T  46256034 aataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 46256133  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  46256134 tccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 46256233  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  46256234 ccgtgcggcagcacgggtggaaagt 46256258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 44376308 - 44376088
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  44376308 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 44376209  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  44376208 tcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 44376109  T
Q  209 ccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||    
T  44376108 ccgtgcggcagcacgggtgga 44376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 37591033 - 37590809
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||    
T  37591033 aataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 37590934  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||     
T  37590933 tcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatgac 37590834  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  37590833 ccgtgcggcagcacgggtggaaagt 37590809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 35760585 - 35760803
Alignment:
Q  14 atataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||  ||||||| ||||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||  |||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgt 35760784  T
Q  213 gcggcagcacgggtggaaa 231  Q
    |||||||||||||||||||    
T  35760785 gcggcagcacgggtggaaa 35760803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 41387126 - 41387350
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||       |||||||||| ||||||||||||||    
T  41387126 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 41387225  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  41387226 tcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 41387325  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||| ||||||||||| ||||||||    
T  41387326 ccgtacggcagcacggatggaaagt 41387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 48118760 - 48118539
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||       |||||||| | ||||||| ||||||    
T  48118760 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggt 48118661  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||   |||||||||||||||||     
T  48118660 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac---atctacaatgtatatgac 48118564  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  48118563 tcgtgcggcagcacgggtggaaagt 48118539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 45977219 - 45976995
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||    
T  45977219 aataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 45977120  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| |||||| ||||||||||     
T  45977119 tcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatgac 45977020  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||| ||||||||| ||||||||    
T  45977019 ccgtgcagcagcacggatggaaagt 45976995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 47143029 - 47142805
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||| ||| ||||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||       ||||||||||| |||||||||||||    
T  47143029 aataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggt 47142930  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  47142929 tcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 47142830  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||||||    
T  47142829 cagtgcggcagcacgggtggaaagt 47142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 39058586 - 39058364
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||       |||||||||| ||||| ||||||||    
T  39058586 aataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggt 39058487  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||  ||| | ||||||||||||||||||||||||||||||||||||     
T  39058486 tcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatgac 39058387  T
Q  209 ccgtgcggcagcacgggtggaaa 231  Q
    |||||||||||||| ||||||||    
T  39058386 ccgtgcggcagcacaggtggaaa 39058364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 215
Target Start/End: Complemental strand, 31628716 - 31628510
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||       | |||||||| ||||||| ||||||    
T  31628716 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggt 31628617  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||     
T  31628616 tcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgac 31628517  T
Q  209 ccgtgcg 215  Q
    |||||||    
T  31628516 ccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 52098420 - 52098214
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgagg 108  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||       |||||||||| || |||||||| |    
T  52098420 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaag 52098321  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 207  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  52098320 tttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatatga 52098221  T
Q  208 tccgtgc 214  Q
     ||||||    
T  52098220 cccgtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 45782658 - 45782478
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  45782658 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 45782559  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctacta 189  Q
    || ||||||||||||| ||||||||| |||||||||||||||||||| |||||||  |||||||||| |||||||||||||    
T  45782558 tcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 215
Target Start/End: Original strand, 54624957 - 54625156
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||      |||||||||||||||       |||||||||| ||||||||||||||    
T  54624957 aataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 54625049  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||| |     
T  54625050 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatataac 54625149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 50229936 - 50229768
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaa-ttaatannnnnnnggtgaataagcgtggtgtctgagg 108  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||       ||||||||||  ||||||||||||    
T  50229936 aataatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgagg 50229837  T
Q  109 ttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttg 176  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  50229836 ttcgaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  145 tatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaa 198  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatata 132  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 18209699 - 18209735
Alignment:
Q  197 aatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||| |||||||||||||||||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagt 18209735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 35903633 - 35903693
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||| |||||||||||| || ||| ||||||||||||||||||||| || || ||||||||    
T  35903633 tttgcttttgtctactacatttacgatgtatatgatccgtgcggcaacatggatggaaagt 35903693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 19745228 - 19745278
Alignment:
Q  179 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    ||||||||||| |  |||||||||||||| ||||||||| |||||||||||    
T  19745228 tttgtctactacacttacaatgtatatgacccgtgcggccgcacgggtgga 19745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 19794578 - 19794528
Alignment:
Q  179 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    ||||||||||| |  |||||||||||||| ||||||||| |||||||||||    
T  19794578 tttgtctactacacttacaatgtatatgacccgtgcggccgcacgggtgga 19794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 12090775 - 12090730
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  12090775 ataatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 16905263 - 16905218
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  16905263 ataatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 16918203 - 16918158
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  16918203 ataatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30825237 - 30825192
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  30825237 ataatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 31966284 - 31966239
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  31966284 ataatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 39058667 - 39058622
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  39058667 ataatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 45977309 - 45977264
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  45977309 ataatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 47143115 - 47143070
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  47143115 ataatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 48118847 - 48118802
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  48118847 ataatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 52098505 - 52098460
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  52098505 ataatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 52434538 - 52434583
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  52434538 ataatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 53143579 - 53143534
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  53143579 ataatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 54624877 - 54624922
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  54624877 ataatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 12264200 - 12264424
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  12264200 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 12264299  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12264300 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 12264399  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  12264400 ccgtgcggcagcacgggtggaaagt 12264424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 38654156 - 38653932
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  38654156 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 38654057  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38654056 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 38653957  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  38653956 ccgtgcggcagcacgggtggaaagt 38653932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 43363840 - 43363616
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  43363840 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 43363741  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43363740 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 43363641  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  43363640 ccgtgcggcagcacgggtggaaagt 43363616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 49672562 - 49672786
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  49672562 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 49672661  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  49672662 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 49672761  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  49672762 ccgtgcggcagcacgggtggaaagt 49672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 1941949 - 1941725
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||| ||||||||||    
T  1941949 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgaggt 1941850  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  1941849 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 1941750  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  1941749 ccgtgcggcagcacgggtggaaagt 1941725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 21098304 - 21098528
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  21098304 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 21098403  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  21098404 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgac 21098503  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  21098504 ccgtgcggcagcacgggtggaaagt 21098528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 34121355 - 34121579
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  34121355 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 34121454  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  34121455 tcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 34121554  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  34121555 ccgtgcggcagcacgggtggaaagt 34121579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 3898422 - 3898646
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  3898422 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 3898521  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  3898522 tcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 3898621  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  3898622 ccgtgcggcagcacgggtggaaagt 3898646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 49506578 - 49506354
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||       |||||||||||||||||||||||||    
T  49506578 aataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 49506479  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  49506478 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 49506379  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||| |||||||||||||    
T  49506378 ccgtgcggcagtacgggtggaaagt 49506354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 54073027 - 54073254
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  54073027 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 54073126  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatg---tatat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  54073127 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatat 54073226  T
Q  206 gatccgtgcggcagcacgggtggaaagt 233  Q
    || |||||||||||||||||||||||||    
T  54073227 gacccgtgcggcagcacgggtggaaagt 54073254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 26948798 - 26949022
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||    
T  26948798 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggt 26948897  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  26948898 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 26948997  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  26948998 ccgtgcggcagcacgggtggaaagt 26949022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 4584663 - 4584439
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  4584663 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 4584564  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  4584563 tcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 4584464  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  4584463 ccgtgcggcagcacgggtggaaagt 4584439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 20671249 - 20671473
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  20671249 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 20671348  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  20671349 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 20671448  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     |||| |||||||||||||||||||    
T  20671449 tcgtgtggcagcacgggtggaaagt 20671473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 31488411 - 31488635
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  31488411 aataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 31488510  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |     
T  31488511 tcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatataac 31488610  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||| ||||||||    
T  31488611 ccgtgcggcagcacggatggaaagt 31488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 36076683 - 36076459
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||| ||    
T  36076683 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagt 36076584  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctcttga-tatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||     
T  36076583 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 36076484  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  36076483 ccgtgcggcagcacgggtggaaagt 36076459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 39146440 - 39146664
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  39146440 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 39146539  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||     
T  39146540 tcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgac 39146639  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||| ||| | ||||||||    
T  39146640 ccgtgcggcaacacagatggaaagt 39146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 45558113 - 45557889
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  45558113 aataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 45558014  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  45558013 tcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgac 45557914  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | || ||| ||||| ||||||||||    
T  45557913 ctgtacggtagcactggtggaaagt 45557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 49478208 - 49478432
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  49478208 aataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 49478307  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| |||||||  ||||||||||| ||||     
T  49478308 tcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatgac 49478407  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  49478408 tcgtgcggcagcacgggtggaaagt 49478432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 55041818 - 55041588
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtc 103  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||      |||||       |||||||||| ||||||||    
T  55041818 aataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtc 55041719  T
Q  104 tgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgta 202  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  55041718 tgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgta 55041619  T
Q  203 tatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||| |||||||| ||||||||||||||||    
T  55041618 tatgacccgtgcggtagcacgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 55 - 233
Target Start/End: Complemental strand, 40014837 - 40014658
Alignment:
Q  55 cacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 154  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  155 tc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    || ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 40014658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 24119207 - 24119394
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  24119207 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 24119306  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctac 196  Q
    | ||||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||| ||||||    
T  24119307 ttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggg-accacatatttcattctctt-gatatgcattgagatttgtttttg 182  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  183 tctactatatctacaatgtatatg 206  Q
    ||||||| ||||||||||||||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 6460273 - 6460173
Alignment:
Q  133 tttgggaccacatatttcattctcttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaag 232  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  6460273 tttgggaccacatattttattcttttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaag 6460174  T
Q  233 t 233  Q
    |    
T  6460173 t 6460173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 26052307 - 26052240
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaata 77  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26052307 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 26052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 37099713 - 37099764
Alignment:
Q  178 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||||    
T  37099713 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 37099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 1942035 - 1941990
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  1942035 ataatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 3898336 - 3898381
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  3898336 ataatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 12264113 - 12264158
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  12264113 ataatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 20671164 - 20671209
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  20671164 ataatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21098217 - 21098262
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  21098217 ataatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 26052394 - 26052349
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  26052394 ataatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 26948687 - 26948732
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  26948687 ataatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31488327 - 31488372
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  31488327 ataatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 34121269 - 34121314
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  34121269 ataatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 38654243 - 38654198
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  38654243 ataatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 43363926 - 43363881
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  43363926 ataatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 49478122 - 49478167
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  49478122 ataatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 49672476 - 49672521
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  49672476 ataatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 55041903 - 55041858
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  55041903 ataatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 41664510 - 41664734
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  41664510 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 41664609  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41664610 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 41664709  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  41664710 ccgtgcggcagcacgggtggaaagt 41664734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 6120552 - 6120776
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  6120552 aataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 6120651  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6120652 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 6120751  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  6120752 ccgtgcggcagcacgggtggaaagt 6120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 18351551 - 18351775
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||| ||||||    
T  18351551 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggt 18351650  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  18351651 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 18351750  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  18351751 ccgtgcggcagcacgggtggaaagt 18351775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 41663237 - 41663461
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  41663237 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 41663336  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41663337 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 41663436  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    || ||||||||||||||||||||||    
T  41663437 ccatgcggcagcacgggtggaaagt 41663461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 44902082 - 44902305
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||        ||||||||||||||||||||||||    
T  44902082 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgaggt 44902180  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44902181 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 44902280  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  44902281 ccgtgcggcagcacgggtggaaagt 44902305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 19596592 - 19596368
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||||||||||||||||||    
T  19596592 aataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggt 19596493  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||     
T  19596492 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 19596393  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  19596392 ccgtgcggcagcacgggtggaaagt 19596368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 12 - 233
Target Start/End: Original strand, 20544827 - 20545049
Alignment:
Q  12 taatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||       |||||||||||||||||| | ||||||    
T  20544827 taatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttc 20544926  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgatcc 210  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  20544927 gaattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgaccc 20545026  T
Q  211 gtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||    
T  20545027 gtgcggcagcacgggtggaaagt 20545049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 8700261 - 8700485
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||| ||  ||||||| ||||||    
T  8700261 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggt 8700360  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||     
T  8700361 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatgac 8700460  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  8700461 ccgtgcggcagcacgggtggaaagt 8700485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 31424009 - 31424233
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||| ||||||| ||||||    
T  31424009 aataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggt 31424108  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  31424109 tcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 31424208  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  31424209 tcgtgcggcagcacgggtggaaagt 31424233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 42441960 - 42442188
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||       |||||||||||||||||||||||||    
T  42441960 aataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 42442057  T
Q  110 tcgaattc------caacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgta 202  Q
    ||||||||      ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42442058 tcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 42442157  T
Q  203 tatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||| |||||||||| ||||||||||||||    
T  42442158 tatgacccgtgcggcaacacgggtggaaagt 42442188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 26231488 - 26231264
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       | |||||||| ||||||||||||||    
T  26231488 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggt 26231389  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| |     
T  26231388 tcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatataac 26231289  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    | |||||| |||||||||| |||||    
T  26231288 ctgtgcggtagcacgggtgaaaagt 26231264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 36279683 - 36279460
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||| |||||| |    
T  36279683 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagat 36279584  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||||||||||     
T  36279583 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatgac 36279484  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     |||||  | |||||||||||||||    
T  36279483 tcgtgctac-gcacgggtggaaagt 36279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 42055199 - 42055423
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| |||||||||  || ||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  42055199 aataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 42055296  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  42055297 tcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 42055396  T
Q  209 ccgtgcg--gcagcacgggtggaaagt 233  Q
    |||||||  | ||||||||||||||||    
T  42055397 ccgtgcggtgtagcacgggtggaaagt 42055423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 27944949 - 27944801
Alignment:
Q  86 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  185 tactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 27944801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 34007938 - 34007742
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||       |||| ||||| ||||||||||||||    
T  34007938 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggt 34007839  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 205  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  34007838 tcgaattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatat 34007742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 999460 - 999262
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  999460 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 999361  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 207  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  999360 tcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatga 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 16214824 - 16215012
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||       |||||||||| |||||||  |||||    
T  16214824 aataatgtaacactgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggt 16214923  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctaca 197  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  16214924 tcgaattcctacatttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 692356 - 692227
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgt 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  184 ctactatatctacaatgtatatgatccgtg 213  Q
    |||||| || |||||||||||||| |||||    
T  692256 ctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 31572450 - 31572501
Alignment:
Q  178 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||||    
T  31572450 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 31572501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 19596679 - 19596634
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  19596679 ataatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 25889097 - 25889044
Alignment:
Q  179 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||| | |||| ||||||||| ||||||||||||||| |||||||||    
T  25889097 tttgtctactattt-tacattgtatatgacccgtgcggcagcacgagtggaaagt 25889044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 6120465 - 6120510
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  6120465 ataatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 16214739 - 16214784
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  16214739 ataatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 18351465 - 18351510
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  18351465 ataatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 26231572 - 26231527
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  26231572 ataatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31423922 - 31423967
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  31423922 ataatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 34008025 - 34007980
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  34008025 ataatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 41663150 - 41663195
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  41663150 ataatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42441874 - 42441919
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  42441874 ataatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 4266381 - 4266605
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  4266381 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 4266480  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4266481 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 4266580  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  4266581 ccgtgcggcagcacgggtggaaagt 4266605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 34888915 - 34888691
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  34888915 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 34888816  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34888815 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 34888716  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  34888715 ccgtgcggcagcacgggtggaaagt 34888691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 38913976 - 38913752
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  38913976 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 38913877  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38913876 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 38913777  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  38913776 ccgtgcggcagcacgggtggaaagt 38913752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 2951595 - 2951371
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  2951595 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 2951496  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||||| ||||||||||||||     
T  2951495 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatgac 2951396  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  2951395 ccgtgcggcagcacgggtggaaagt 2951371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 50151060 - 50151265
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  50151060 aataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggt 50151159  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  50151160 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 50151259  T
Q  209 ccgtgc 214  Q
    ||||||    
T  50151260 ccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 1231813 - 1232020
Alignment:
Q  27 atataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 126  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  127 catatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacggg 225  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacggg 1232012  T
Q  226 tggaaagt 233  Q
    ||||||||    
T  1232013 tggaaagt 1232020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 9216031 - 9216255
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       ||| |||||| ||||||||||||||    
T  9216031 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggt 9216130  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||     
T  9216131 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatgac 9216230  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  9216231 ccgtgcggcagcacgggtggaaagt 9216255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 35614067 - 35614294
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||| | ||    
T  35614067 aataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagt 35614166  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||     
T  35614167 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatgac 35614266  T
Q  209 ccgtgcggcagcacgggtggaaagtata 236  Q
    |||||||| |||||||||||||||||||    
T  35614267 ccgtgcggtagcacgggtggaaagtata 35614294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 23482936 - 23482712
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||    
T  23482936 aataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggt 23482837  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||     
T  23482836 tcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatgac 23482737  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  23482736 tcgtgcggcagcacgggtggaaagt 23482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 7333944 - 7334168
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  7333944 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggt 7334043  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| || ||||| |     
T  7334044 ttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatataac 7334143  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||| |||||||||||| |||||    
T  7334144 ccgtgcagcagcacgggtgaaaagt 7334168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 18706737 - 18706514
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||       |||||||||| ||||||| ||||||    
T  18706737 aataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggt 18706638  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||     
T  18706637 tcgaattccaacatctgcatatatttgg-accacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgac 18706539  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
     ||||||||||||||||||||||||    
T  18706538 tcgtgcggcagcacgggtggaaagt 18706514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 38444631 - 38444855
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||       |||||||||| ||||||||||| ||    
T  38444631 aataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagt 38444730  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  38444731 tcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgac 38444830  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    || ||||||| ||||||||||||||    
T  38444831 ccatgcggcatcacgggtggaaagt 38444855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 31018354 - 31018205
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  184 ctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31018254 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 31018205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 50326076 - 50326225
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  184 ctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  50326176 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 50326225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 233
Target Start/End: Complemental strand, 52687340 - 52687119
Alignment:
Q  12 taatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    |||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||||    
T  52687340 taatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttc 52687242  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattctcttg-atatgcattgagatttgtttttgtctactatatctacaatgtatatgatcc 210  Q
    | |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  52687241 ggattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgaccc 52687142  T
Q  211 gtgcggcagcacgggtggaaagt 233  Q
    ||||| |||||||||||||||||    
T  52687141 gtgcgacagcacgggtggaaagt 52687119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 18855461 - 18855238
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||    
T  18855461 aataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 18855362  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||||     
T  18855361 tcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatgac 18855263  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  18855262 ccgtgcggcagcacgggtggaaagt 18855238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 39727980 - 39728169
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  39727980 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 39728079  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaa 198  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  39728080 tcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 35614818 - 35615005
Alignment:
Q  12 taatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       ||| |||||| ||||||||||||||||    
T  35614818 taatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaa-ggtaaataagtgtggtgtctgaggttc 35614916  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaat 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||    
T  35614917 gaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 19764768 - 19764593
Alignment:
Q  21 attgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  121 catctgcatatatttgggaccacatatttcattc-tcttgatatgcattgagatttgtttttgtctactatatcta 195  Q
    ||| |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||||| |||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 2590335 - 2590468
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  2590335 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 2590434  T
Q  110 tcgaattccaacatctgcatatatttgggaccaca 144  Q
    | |||||| ||||||||||||||||||| ||||||    
T  2590435 t-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 19768464 - 19768602
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||       | |||||||| ||||||||||||||    
T  19768464 aataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggt 19768563  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatt 148  Q
    ||||| | |||||||| ||| ||||||| ||||||||||    
T  19768564 tcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 29942153 - 29942242
Alignment:
Q  145 tatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 29942242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  122 atctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatat 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 32360560 - 32360504
Alignment:
Q  233 tataactttatttttatgagtttttgagtcaaaaccaatccaaaccctacgacactg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32360560 tataactttatttttatgagtttttgagtcaaaaccaatccaaaccctacgacactg 32360504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 32360370 - 32360317
Alignment:
Q  233 tataactttatttttatgagtttttgagtcaaaaccaatccaaaccctacgaca 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32360370 tataactttatttttatgagtttttgagtcaaaatcaatccaaaccctacgaca 32360317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 29387952 - 29387896
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||    
T  29387952 tttgtttttgtctactacacttacaatgtatatgacccgtgcggcagtacgggtgga 29387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 52957058 - 52957096
Alignment:
Q  191 atctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  52957058 atctacaatgtatatgacccgtgcggcagcacgggtgga 52957096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 28947519 - 28947463
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||||||||||| |  || ||||||||||| |||||||||||||||||||||    
T  28947519 tttgcttttgtctactacacttataatgtatatgacccgtgcggcagcacgggtgga 28947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 2590466 - 2590504
Alignment:
Q  195 acaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagt 2590504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 14009849 - 14009895
Alignment:
Q  177 tttttgtctactatatctacaatgtatatgatccgtgcggcagcacg 223  Q
    ||||||||||||| || |||||| ||||||| |||||||||||||||    
T  14009849 tttttgtctactacatttacaatttatatgacccgtgcggcagcacg 14009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1231723 - 1231768
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  1231723 ataatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 2951681 - 2951636
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  2951681 ataatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 4266295 - 4266340
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  4266295 ataatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 18706818 - 18706773
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  18706818 ataatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 19764859 - 19764814
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19764859 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19768380 - 19768425
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  19768380 ataatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23483017 - 23482972
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  23483017 ataatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 35613982 - 35614027
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  35613982 ataatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 35614732 - 35614777
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  35614732 ataatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 38914062 - 38914017
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  38914062 ataatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 52036355 - 52036310
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  52036355 ataatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

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Target: scaffold0022 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 149279 - 149055
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| || |||| ||| ||    
T  149279 aataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgt 149180  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctctt-gatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||     
T  149179 tcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatgac 149080  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||||||||||||    
T  149079 ccgtgcggcagcacgggtggaaagt 149055  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 149363 - 149318
Alignment:
Q  11 ataatataatattgacatataattttaacaaaagaataaagtaaca 56  Q
    ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  149363 ataatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 19347 - 19571
Alignment:
Q  10 aataatataatattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggt 109  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  19347 aataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggt 19446  T
Q  110 tcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||||||||||| |||||||||||||| ||     
T  19447 tcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtataggac 19546  T
Q  209 ccgtgcggcagcacgggtggaaagt 233  Q
    |||| ||||||||||||||||||||    
T  19547 ccgtacggcagcacgggtggaaagt 19571  T

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Target: scaffold0836 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 5430 - 5283
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtct 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  186 actatatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 233  Q
    | |||||||||||||||||||  |||||||||||||||||||||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagt 5283  T

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Target: scaffold0515 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 6213 - 6068
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtct 185  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  186 actatatctacaatgtatatgatccgtgcggcagcacgggtggaaa 231  Q
    || | ||||||||||||||||| |||||||||||||||||||||||    
T  6113 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 6223 - 6078
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctc-ttgatatgcattgagatttgtttttgtct 185  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  186 actatatctacaatgtatatgatccgtgcggcagcacgggtggaaa 231  Q
    || | ||||||||||||||||| |||||||||||||||||||||||    
T  6123 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 1081 - 1137
Alignment:
Q  173 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgga 229  Q
    |||| |||||||||||| |  |||||||||||||| |||||||||||||||||||||    
T  1081 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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