View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6909_low_25 (Length: 267)
Name: NF6909_low_25
Description: NF6909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6909_low_25 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 7276978 - 7277144
Alignment:
| Q |
1 |
atgttaagtgaaatggtgtagattagtgatgtgtcacacaaagtgtacatatatcataaactccttaaacttgaatcatctccttcccatcattctctga |
100 |
Q |
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| T |
7276978 |
atgttaagtgaaatggtgtagattagtgatgtgtcacacgaagggtacatatatcataaactctttaaatttgaatcatctccttcccatcattctctga |
7277077 |
T |
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| Q |
101 |
ttctctttctttcacaaagttgtatttctcgttttctaaatttttagatggaagattaaaagagaat |
167 |
Q |
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| T |
7277078 |
ttctctttccttcacaaagttgtatttctcgttttctaaatttttagatggaagattaaaagagaat |
7277144 |
T |
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