View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6910_low_2 (Length: 638)

Name: NF6910_low_2
Description: NF6910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6910_low_2
NF6910_low_2
[»] chr5 (25 HSPs)
chr5 (21-631)||(4554219-4554832)
chr5 (464-557)||(4555337-4555430)
chr5 (453-526)||(16689589-16689662)
chr5 (458-537)||(4789521-4789600)
chr5 (458-536)||(26712357-26712435)
chr5 (458-536)||(26982095-26982173)
chr5 (457-548)||(26711568-26711660)
chr5 (457-548)||(26981305-26981397)
chr5 (457-550)||(17767546-17767639)
chr5 (455-503)||(9142045-9142093)
chr5 (456-503)||(6803947-6803994)
chr5 (457-526)||(16690369-16690438)
chr5 (480-536)||(6804802-6804858)
chr5 (464-552)||(6805910-6805998)
chr5 (455-557)||(4820452-4820555)
chr5 (457-548)||(6007611-6007702)
chr5 (456-535)||(32943516-32943595)
chr5 (457-528)||(35262452-35262523)
chr5 (457-535)||(32944454-32944532)
chr5 (456-520)||(4790203-4790266)
chr5 (456-523)||(4555442-4555509)
chr5 (456-499)||(6804890-6804933)
chr5 (457-503)||(4301905-4301951)
chr5 (457-503)||(12201377-12201423)
chr5 (470-503)||(42651581-42651614)
[»] chr1 (41 HSPs)
chr1 (26-287)||(17494879-17495134)
chr1 (457-557)||(31787478-31787578)
chr1 (473-557)||(11469097-11469181)
chr1 (457-557)||(31788224-31788324)
chr1 (457-557)||(14925290-14925390)
chr1 (471-553)||(11469717-11469799)
chr1 (130-282)||(17198931-17199081)
chr1 (457-557)||(14924674-14924774)
chr1 (46-131)||(37874450-37874536)
chr1 (456-557)||(2687675-2687776)
chr1 (457-558)||(46134563-46134665)
chr1 (455-512)||(50950888-50950945)
chr1 (464-552)||(11426860-11426948)
chr1 (457-551)||(4641716-4641810)
chr1 (486-552)||(7463444-7463510)
chr1 (486-552)||(7464023-7464089)
chr1 (487-557)||(38618260-38618330)
chr1 (464-549)||(29334221-29334306)
chr1 (457-558)||(36271400-36271501)
chr1 (455-523)||(38931312-38931380)
chr1 (470-529)||(11031444-11031503)
chr1 (453-552)||(11427460-11427559)
chr1 (456-503)||(42383719-42383766)
chr1 (454-523)||(27420274-27420344)
chr1 (457-503)||(36385668-36385714)
chr1 (486-552)||(37889908-37889974)
chr1 (457-523)||(49420084-49420150)
chr1 (457-558)||(6766974-6767075)
chr1 (464-557)||(42384102-42384195)
chr1 (103-155)||(17198872-17198924)
chr1 (457-493)||(49420967-49421003)
chr1 (470-529)||(11032195-11032254)
chr1 (456-523)||(27418163-27418229)
chr1 (462-517)||(30466187-30466242)
chr1 (456-503)||(41884231-41884278)
chr1 (456-503)||(43317118-43317165)
chr1 (456-503)||(45922231-45922278)
chr1 (456-523)||(47334198-47334265)
chr1 (456-503)||(48835099-48835146)
chr1 (457-503)||(294625-294671)
chr1 (457-503)||(42646040-42646086)
[»] chr4 (55 HSPs)
chr4 (457-557)||(6246784-6246884)
chr4 (457-557)||(6247418-6247519)
chr4 (474-631)||(15481443-15481601)
chr4 (471-623)||(10421461-10421615)
chr4 (30-171)||(47523529-47523662)
chr4 (457-526)||(232028-232097)
chr4 (46-131)||(55159647-55159733)
chr4 (471-631)||(15481049-15481210)
chr4 (458-551)||(6680296-6680389)
chr4 (487-557)||(50710365-50710435)
chr4 (487-557)||(53664242-53664312)
chr4 (506-557)||(10420966-10421017)
chr4 (470-557)||(30808634-30808721)
chr4 (474-557)||(45331401-45331484)
chr4 (456-526)||(231435-231504)
chr4 (456-534)||(33370846-33370924)
chr4 (470-557)||(30809453-30809540)
chr4 (511-553)||(13856645-13856687)
chr4 (457-503)||(25970106-25970152)
chr4 (511-557)||(50709713-50709759)
chr4 (456-549)||(23383309-23383402)
chr4 (455-512)||(54453093-54453150)
chr4 (456-548)||(33463676-33463768)
chr4 (455-523)||(34155608-34155676)
chr4 (453-557)||(34371459-34371562)
chr4 (470-529)||(45330578-45330637)
chr4 (456-503)||(54006727-54006774)
chr4 (455-489)||(51412592-51412626)
chr4 (487-557)||(53665034-53665104)
chr4 (209-270)||(47523476-47523537)
chr4 (455-503)||(34154792-34154840)
chr4 (455-503)||(41261892-41261940)
chr4 (455-503)||(54008456-54008504)
chr4 (493-552)||(2093865-2093924)
chr4 (455-498)||(20351318-20351361)
chr4 (456-535)||(33369908-33369987)
chr4 (486-557)||(34956313-34956384)
chr4 (456-503)||(39429939-39429986)
chr4 (456-503)||(41261121-41261168)
chr4 (464-503)||(55514356-55514395)
chr4 (457-523)||(32449317-32449383)
chr4 (457-503)||(47326791-47326837)
chr4 (457-503)||(47341587-47341633)
chr4 (499-557)||(50709034-50709092)
chr4 (457-498)||(22062233-22062274)
chr4 (455-523)||(25655620-25655689)
chr4 (458-523)||(36451409-36451474)
chr4 (487-558)||(3847916-3847988)
chr4 (457-536)||(11680276-11680356)
chr4 (457-536)||(11688555-11688635)
chr4 (457-536)||(12590171-12590251)
chr4 (455-503)||(22061328-22061376)
chr4 (455-503)||(23425209-23425257)
chr4 (455-503)||(25970805-25970853)
chr4 (471-503)||(47377600-47377632)
[»] chr3 (28 HSPs)
chr3 (456-631)||(38337349-38337526)
chr3 (457-551)||(55124414-55124508)
chr3 (471-547)||(38336958-38337034)
chr3 (457-523)||(33968181-33968247)
chr3 (470-550)||(15450239-15450318)
chr3 (464-557)||(44022035-44022128)
chr3 (457-523)||(45297549-45297615)
chr3 (451-513)||(8439477-8439539)
chr3 (456-550)||(49161763-49161857)
chr3 (470-523)||(27452636-27452689)
chr3 (455-536)||(33454864-33454945)
chr3 (462-503)||(45501296-45501337)
chr3 (456-549)||(49288631-49288724)
chr3 (455-519)||(8652808-8652872)
chr3 (464-523)||(20313412-20313472)
chr3 (455-503)||(33455783-33455831)
chr3 (455-503)||(44021284-44021331)
chr3 (455-499)||(49160985-49161029)
chr3 (457-549)||(49287687-49287779)
chr3 (456-520)||(51421660-51421724)
chr3 (456-503)||(44064188-44064235)
chr3 (482-549)||(44406915-44406982)
chr3 (487-549)||(11267642-11267704)
chr3 (455-493)||(36232866-36232904)
chr3 (464-534)||(52398999-52399069)
chr3 (457-497)||(42108370-42108410)
chr3 (464-536)||(52398330-52398402)
chr3 (456-548)||(54901372-54901464)
[»] chr8 (23 HSPs)
chr8 (456-557)||(12350602-12350703)
chr8 (457-557)||(12349967-12350067)
chr8 (457-557)||(43971278-43971378)
chr8 (457-631)||(43924890-43925066)
chr8 (457-557)||(43972034-43972134)
chr8 (479-557)||(39257656-39257734)
chr8 (471-557)||(43924504-43924590)
chr8 (456-523)||(40450968-40451035)
chr8 (491-557)||(38686337-38686403)
chr8 (487-557)||(33801529-33801599)
chr8 (487-557)||(33802321-33802391)
chr8 (487-557)||(38687003-38687073)
chr8 (456-500)||(35943075-35943119)
chr8 (457-503)||(35840532-35840578)
chr8 (500-557)||(15183796-15183853)
chr8 (457-557)||(39258397-39258491)
chr8 (457-520)||(27322572-27322635)
chr8 (457-523)||(37562295-37562361)
chr8 (457-493)||(35839722-35839758)
chr8 (455-502)||(6012967-6013014)
chr8 (457-492)||(38660076-38660111)
chr8 (456-493)||(33688222-33688259)
chr8 (455-503)||(42346107-42346155)
[»] scaffold0189 (2 HSPs)
scaffold0189 (457-557)||(12807-12907)
scaffold0189 (457-557)||(12184-12284)
[»] chr2 (30 HSPs)
chr2 (457-557)||(4975696-4975796)
chr2 (457-557)||(4993604-4993704)
chr2 (456-557)||(4976453-4976554)
chr2 (456-557)||(4994360-4994461)
chr2 (463-554)||(41519876-41519967)
chr2 (457-557)||(42369643-42369743)
chr2 (464-556)||(42370899-42370991)
chr2 (455-523)||(36390955-36391023)
chr2 (473-557)||(37545692-37545776)
chr2 (46-127)||(5276890-5276972)
chr2 (39-171)||(36476369-36476493)
chr2 (456-528)||(34617652-34617724)
chr2 (491-557)||(8536171-8536237)
chr2 (487-557)||(8536834-8536904)
chr2 (462-523)||(15602802-15602863)
chr2 (456-503)||(24383064-24383112)
chr2 (462-520)||(36391657-36391715)
chr2 (464-553)||(36718974-36719063)
chr2 (455-523)||(7868123-7868191)
chr2 (480-536)||(41768712-41768768)
chr2 (456-503)||(23876065-23876112)
chr2 (470-529)||(37546540-37546599)
chr2 (209-270)||(36476485-36476546)
chr2 (455-503)||(6085703-6085751)
chr2 (451-503)||(38740438-38740489)
chr2 (487-558)||(41042572-41042644)
chr2 (457-503)||(2307075-2307121)
chr2 (462-550)||(23875245-23875333)
chr2 (471-523)||(30545417-30545469)
chr2 (457-497)||(44094825-44094865)
[»] chr7 (25 HSPs)
chr7 (461-557)||(46757428-46757524)
chr7 (457-557)||(12732247-12732347)
chr7 (470-557)||(27599224-27599311)
chr7 (464-541)||(46759226-46759303)
chr7 (456-523)||(24995851-24995918)
chr7 (470-557)||(27600043-27600130)
chr7 (457-535)||(32548643-32548721)
chr7 (456-500)||(6730162-6730206)
chr7 (455-523)||(42607079-42607147)
chr7 (457-503)||(35771261-35771307)
chr7 (457-550)||(32871095-32871188)
chr7 (463-523)||(24996665-24996725)
chr7 (456-503)||(29060741-29060788)
chr7 (456-503)||(5064647-5064694)
chr7 (464-499)||(9122657-9122692)
chr7 (482-549)||(30915759-30915826)
chr7 (456-499)||(40320416-40320459)
chr7 (457-503)||(14629819-14629865)
chr7 (457-503)||(36844612-36844658)
chr7 (457-523)||(40257580-40257646)
chr7 (457-503)||(40319606-40319652)
chr7 (459-511)||(35770276-35770328)
chr7 (463-523)||(40257784-40257844)
chr7 (455-551)||(40258688-40258784)
chr7 (455-519)||(42607798-42607862)
[»] chr6 (12 HSPs)
chr6 (471-631)||(27763427-27763588)
chr6 (46-131)||(9574066-9574152)
chr6 (457-523)||(25371169-25371235)
chr6 (457-505)||(8384018-8384066)
chr6 (457-500)||(16764925-16764968)
chr6 (470-548)||(34034181-34034259)
chr6 (456-536)||(10608288-10608369)
chr6 (457-518)||(29290123-29290184)
chr6 (457-501)||(4311192-4311236)
chr6 (471-503)||(24125986-24126018)
chr6 (455-503)||(25067852-25067900)
chr6 (456-544)||(34035005-34035093)
[»] scaffold0071 (1 HSPs)
scaffold0071 (470-550)||(11873-11952)
[»] scaffold2003 (1 HSPs)
scaffold2003 (456-550)||(486-580)
[»] scaffold0129 (1 HSPs)
scaffold0129 (457-520)||(43203-43266)
[»] scaffold0150 (1 HSPs)
scaffold0150 (457-499)||(14012-14054)
[»] scaffold0119 (1 HSPs)
scaffold0119 (481-525)||(36620-36664)
[»] scaffold0051 (1 HSPs)
scaffold0051 (458-506)||(15058-15106)


Alignment Details
Target: chr5 (Bit Score: 453; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 21 - 631
Target Start/End: Original strand, 4554219 - 4554832
Alignment:
Q  21 tgacgttggttctgaaggaaattaattggggagttatgatttattttgataagtttttactgagtaattgttatgttaaatcatttcattatagtatctt 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4554219 tgacgttggttctgaagaaaattaattggggagttatgatttattttgataagtttttactgagtaattgttatgttaaatcatttcattatagtatctt 4554318  T
Q  121 atgtttatagtttatactaagattttgttttgaacatataaaataagattgcaaactagcgattatcctttatttatattcatacaagataagattgtaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  4554319 atgtttatagtttatactaagattttgttttgaacatataaaataagattgcaaactagcgattatccttcatttatattcatataagataagattgtaa 4554418  T
Q  221 cttcatagtcataataagcaaaattgaacaaaattaatttcctaatttagttgaagaataaaagaagg----nnnnnnnnnntaagggaggagtcagaag 316  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||    
T  4554419 cttcataattataataagcaaaactgaacaaaattaatttcctaatttagttgaagaataaaagaaggaaaaaaaaaaagaataagggaggagtcagaag 4554518  T
Q  317 aaaaattgcagtgaaatgcttgtgttctatgtggaagatgaagatagtgggtgagattgacatggagcagacaacagagaaagtggttggagaagataaa 416  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||    
T  4554519 aaaaattgcagtgaaatgcttgtgttctatgtgaaagatgaagatagtgggtgagattgacatggagcagacaacagagagagtggttggag--gataaa 4554616  T
Q  417 aatctagtgtatattaagactgtgatctttacttaatctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgacc 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||  |||||||||||    
T  4554617 aatctagtgtatattaagactgtgatctttacttaatctaggtggggtttagtatgggaaaggaaaattgttttccaccatgagaaagctaattttgacc 4554716  T
Q  517 attagataaagtagagaacatacttttatcatagacactc-acaccagannnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagt 615  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||| || |||||||||||||| |||||||||||||    
T  4554717 attagataaagtagagaacatacttttatcatagacactcaacaccaggtttttttccacactcaccactcaacaacaacatgcgattgctgcttcaagt 4554816  T
Q  616 ctctttcttcttctca 631  Q
    |||||||||| |||||    
T  4554817 ctctttcttcctctca 4554832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 4555430 - 4555337
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| | || |||||||| ||||||||||||||||| ||||||||||    
T  4555430 tttagtatgggaaagggaagttgtttcctaccatgggaaagctaattttgaacgttggataaagtggagaacatacttttatcgtagacactca 4555337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 453 - 526
Target Start/End: Original strand, 16689589 - 16689662
Alignment:
Q  453 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 526  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||||| || ||||||||||    
T  16689589 tctaggtggggtttagtatgggaaagggaagttctttcccaccatggaaaagtaaattttaactattagataaa 16689662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 537
Target Start/End: Original strand, 4789521 - 4789600
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacat 537  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||| | ||||||||||||| || | ||||||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaacat 4789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 26712435 - 26712357
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||| ||||||    
T  26712435 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26712357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 26982173 - 26982095
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||| ||||||    
T  26982173 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26982095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 26711568 - 26711660
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt-gaccattagataaagtagagaacatacttttatcat 548  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| | |||||| ||||| ||||| || ||||||||| | |||||||||    
T  26711568 ggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttatcat 26711660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 26981305 - 26981397
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt-gaccattagataaagtagagaacatacttttatcat 548  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| | |||||| ||||| ||||| || ||||||||| | |||||||||    
T  26981305 ggtggggtttagtatgggaaaggaaagttgtttcccaacataggaaagtaaattttagaccactagatcaattagagaacacaattttatcat 26981397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 17767639 - 17767546
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    |||||| |||| |||||||||||   ||||||||||||||||||||| |  |||| ||||||||||| || || |||||||| |||||||||||    
T  17767639 ggtgggatttaatatgggaaaggatcgttgtttcccaccatgggaaagtagatttagaccattagattaactaaagaacatatttttatcatag 17767546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 9142045 - 9142093
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9142045 taggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaa 9142093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 6803947 - 6803994
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6803947 aggtggggtttagtatgggaaagggaagttgtttcctaccataggaaa 6803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 526
Target Start/End: Complemental strand, 16690438 - 16690369
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 526  Q
    ||||||||||||||||||||   |||||| ||| ||||||||||||| | |||||| |||||||||||||    
T  16690438 ggtggggtttagtatgggaatatgaagttcttttccaccatgggaaagtaaattttaaccattagataaa 16690369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 6804858 - 6804802
Alignment:
Q  480 gaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||| ||||||    
T  6804858 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 6804802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 552
Target Start/End: Complemental strand, 6805998 - 6805910
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||| |||||||||||||   ||||||||||||||||||| ||||||| ||||| ||||  |  | |||||||| |||||||||||||    
T  6805998 tttagcatgggaaagggaaagagtttcccaccatgggaaaactaattttaaccatcagatttacaaaagaacataattttatcatagac 6805910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 455 - 557
Target Start/End: Original strand, 4820452 - 4820555
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa-attaattttgaccattagataaagtagagaacatacttttatcatagaca 553  Q
    |||||||||||||  ||||||||||||| |||||| |||||||||||||  ||  ||||| |||||||||  ||||   |||||| ||||||||| ||||    
T  4820452 taggtggggtttaacatgggaaagggaaattgttttccaccatgggaaattttttttttgtccattagattgagtaagaaacataattttatcatggaca 4820551  T
Q  554 ctca 557  Q
    ||||    
T  4820552 ctca 4820555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 6007702 - 6007611
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 548  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||| || |||||| ||||| ||| || || ||| || ||| |||||||    
T  6007702 ggtggggtttagaatgggaaagggaatttgtttcccatgatgggaaagttgattttggccatttgattaaataaagagcacactattatcat 6007611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 535
Target Start/End: Original strand, 32943516 - 32943595
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 535  Q
    ||||||| ||||| ||||||||||  | |||||||||||||||||||| ||||| ||  ||||||||| | |||||||||    
T  32943516 aggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaac 32943595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 528
Target Start/End: Original strand, 35262452 - 35262523
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagt 528  Q
    ||||| |||||| ||||||||||  | |||||||| ||||||||||| ||| ||||||||||||||| ||||    
T  35262452 ggtggagtttagcatgggaaaggataattgtttcctaccatgggaaagttatttttgaccattagattaagt 35262523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 32944532 - 32944454
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 535  Q
    |||||||||||| |||||||| |  | |||||||||||||||| ||| ||||| ||  ||||||||| |||||||||||    
T  32944532 ggtggggtttagcatgggaaatgatacttgtttcccaccatggaaaagttaatgttagccattagattaagtagagaac 32944454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 4790266 - 4790203
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 520  Q
    ||||||||||||| ||||||||| |  ||||||||||| ||||||||| ||| ||||||||||||    
T  4790266 aggtggggtttaggatgggaaagagg-gttgtttcccatcatgggaaagttatttttgaccatta 4790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 523
Target Start/End: Complemental strand, 4555509 - 4555442
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||||||||| |||||||| ||||||| ||||||| |||| |||| ||||| ||  |||||||||    
T  4555509 aggtggggtttagcatgggaaatggaagttctttcccatcatgtgaaagttaatgttagccattagat 4555442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 6804890 - 6804933
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgg 499  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  6804890 aggtggggtttagcatgggaaagaggagttgtttcccaccatgg 6804933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 4301905 - 4301951
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||    
T  4301905 ggtggggtttaatatggaaaagggaagttctttcccatcatgggaaa 4301951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 12201377 - 12201423
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||||||||||||  |||||||||| |||||| ||||    
T  12201377 ggtggggtttagtatgggaaaggagagttgtttcctaccatgagaaa 12201423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 503
Target Start/End: Complemental strand, 42651614 - 42651581
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||||||||||||||||| |||||    
T  42651614 atgggaaagggaagttgtttcccaccataggaaa 42651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 7e-57; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 26 - 287
Target Start/End: Original strand, 17494879 - 17495134
Alignment:
Q  26 ttggttctgaaggaaattaattggggagttatgatttattttgataagtttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtt 125  Q
    |||||||||||| |||| ||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||    
T  17494879 ttggttctgaagaaaataaattgggaagttaggatctattttgataaatttttactgagtaattgttatgttagatcatttaattatagtatcttatatt 17494978  T
Q  126 tatagtttatactaagattttgttttgaacatataaaataagattgcaaactagcgattatccttt-atttatattcatacaagataagattgtaacttc 224  Q
    |||        |  |||||||||||| ||||||||| ||||||||| || |||| |||||  |||| | |||||| |||| |||||||||||||||||||    
T  17494979 tatc-------ccgagattttgttttaaacatataagataagattgtaagctagtgattacactttgaattatatccatataagataagattgtaacttc 17495071  T
Q  225 atagtcataataagcaaaattgaacaaaattaatttcctaatttagttgaagaataaaagaag 287  Q
    ||| ||||||  ||||||| | |||||||||||||||||||||||||||  ||||||||||||    
T  17495072 ataatcataactagcaaaacttaacaaaattaatttcctaatttagttggtgaataaaagaag 17495134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 31787478 - 31787578
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31787478 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattagataaagtagagaacatacttttatcatagagactc 31787577  T
Q  557 a 557  Q
    |    
T  31787578 a 31787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 473 - 557
Target Start/End: Original strand, 11469097 - 11469181
Alignment:
Q  473 ggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11469097 ggaaagggaagttgtttcccaccatgggaaagctaattttgaccattagataaggtagagaacatacttttatcatagacactca 11469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 31788324 - 31788224
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  31788324 ggtgaggtttagtatgggaatgagaagttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactc 31788225  T
Q  557 a 557  Q
    |    
T  31788224 a 31788224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 14925390 - 14925290
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||| |||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14925390 ggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaagctaattttgaccattagataaactagagaacatacttttatcatagacactc 14925291  T
Q  557 a 557  Q
    |    
T  14925290 a 14925290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 471 - 553
Target Start/End: Complemental strand, 11469799 - 11469717
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagaca 553  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11469799 tgggaaagggaagttgtttttcaccatggaaaaactaattttgaccattagataaagtagagaacatacttttatcatagaca 11469717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 282
Target Start/End: Original strand, 17198931 - 17199081
Alignment:
Q  130 gtttatactaagattttgttttgaacatataaaataagattgcaaactagcgattatcctttatttatattcatacaagataagattgtaacttcatagt 229  Q
    ||||||||  ||||||| ||||||||||| || ||||||||| || ||||| |||| ||   ||||||||||||| |||||||||||||||||||||  |    
T  17198931 gtttataccgagattttcttttgaacatacaagataagattgtaagctagctattacccg--atttatattcatataagataagattgtaacttcatcat 17199028  T
Q  230 cataataagcaaaattgaacaaaattaatttcctaatttagttgaagaataaa 282  Q
    ||| || || |||| ||||||||||||||| |||||| ||||||| |||||||    
T  17199029 catcattagtaaaactgaacaaaattaattccctaatctagttgatgaataaa 17199081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 14924674 - 14924774
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||  ||||||||||| ||| || || ||||||||||| |||||||||||||||||    
T  14924674 ggtggtgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacatatttttatcatagacactc 14924773  T
Q  557 a 557  Q
    |    
T  14924774 a 14924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 37874536 - 37874450
Alignment:
Q  46 ttggggagttatgatttattttgataagt-ttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtttatagt 131  Q
    ||||||||||| ||||||||||||||||  |||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  37874536 ttggggagttaggatttattttgataagcattttactcggtaattgttatgttaaatcatttgattgtagtatcttatgtttatagt 37874450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 2687776 - 2687675
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||  |||||| || ||  ||||||| ||||||||||||| ||    
T  2687776 aggtggggtttagcatgggaaaggataattgtttcccaccatgggaaaattatttttgacagttagattaactaaggaacatagttttatcatagactct 2687677  T
Q  556 ca 557  Q
    ||    
T  2687676 ca 2687675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 46134665 - 46134563
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaa-ttaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||| || || ||| |||  | |||||| |||||||    
T  46134665 ggtgtggtttagtatgggaaagggaagttgtttcccatcatgggaaaacttactttttaccattagatcaaatatagaccatgatgttatcaaagacact 46134566  T
Q  556 cac 558  Q
    |||    
T  46134565 cac 46134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 50950945 - 50950888
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt 512  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  50950945 taggtggggtttagcatgggaatgggaagttgtttcccaccataggaaaattattttt 50950888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 552
Target Start/End: Original strand, 11426860 - 11426948
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||| |||| ||||||||   ||||||||||||||||||  |||||||||||||||||| || || |||||| | |||||||||||||    
T  11426860 tttagcatggaaaagggaaagagtttcccaccatgggaaagctaattttgaccattagattaactaaagaacacagttttatcatagac 11426948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 4641810 - 4641716
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 551  Q
    ||||| |||||| ||||||||||| | ||||||||||||| |||||| | | |||  |||||| ||| || ||||||||||| ||||||||||||    
T  4641810 ggtggagtttagcatgggaaaggggaattgtttcccaccaagggaaagtaattttcaaccattggatcaaatagagaacatagttttatcataga 4641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 7463444 - 7463510
Alignment:
Q  486 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||||||||||||||||  |||||||||||||||||| || || |||||| | |||||||||||||    
T  7463444 gtttcccaccatgggaaagctaattttgaccattagattaaataaagaacacagttttatcatagac 7463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 552
Target Start/End: Complemental strand, 7464089 - 7464023
Alignment:
Q  486 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||||||||||||||||| ||||||||||||| |||| || ||||||||| |  ||||||||||||    
T  7464089 gtttcccaccatgggaaaactaattttgaccatcagattaactagagaacacaactttatcatagac 7464023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 38618260 - 38618330
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||| | | ||||||||||| ||||    
T  38618260 tttcccaccatgggaaagttaagtttgaccattagattaagtagtgaacacattcttatcatagactctca 38618330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 549
Target Start/End: Original strand, 29334221 - 29334306
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    ||||| ||||||| ||  |||||||||||||||||||||| | ||||||  ||||||||| || || ||| |||||||||||||||    
T  29334221 tttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttacccattagatcaaataaagaccatacttttatcata 29334306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 36271400 - 36271501
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||||||||||||||  |||||||| |||||| ||| ||||| ||| ||  |||| |||||||||| || || ||| |||| | |||||||||||||||    
T  36271400 ggtggggtttagtatgaaaaagggaaattgttttccatcatggaaaagtttttttttaccattagatcaaatatagaccataatattatcatagacactc 36271499  T
Q  557 ac 558  Q
    ||    
T  36271500 ac 36271501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 523
Target Start/End: Original strand, 38931312 - 38931380
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||| ||| ||||||| | |||||||||||||||||||| | |||||  ||||||||||    
T  38931312 taggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattagat 38931380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 529
Target Start/End: Original strand, 11031444 - 11031503
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 529  Q
    ||||||||||| | | |||||||||||||||||| |||| |||||||||||||| |||||    
T  11031444 atgggaaaggggaatagtttcccaccatgggaaagttaaatttgaccattagattaagta 11031503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 552
Target Start/End: Complemental strand, 11427559 - 11427460
Alignment:
Q  453 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    |||||||||  ||||| |||| ||||||||   |||| | |||||||||||| ||||||||||||| |||| || ||||||||| |  ||||||||||||    
T  11427559 tctaggtggcatttagcatggaaaagggaaagagttttctaccatgggaaaactaattttgaccatcagattaactagagaacacaactttatcatagac 11427460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 42383719 - 42383766
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||    
T  42383719 aggtggggtttagtatgggaaagagaagttgtttcctatcatgggaaa 42383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 27420344 - 27420274
Alignment:
Q  454 ctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa-attaattttgaccattagat 523  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||| ||| |||  |||||||||||||||    
T  27420344 ctaggtgggggttagcatgggtaagggaagttatttcccaccatggaaaatattttttttgaccattagat 27420274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 36385668 - 36385714
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  36385668 ggtggggtttagtatggaaaagggaagttgttttccatcatgggaaa 36385714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 37889908 - 37889974
Alignment:
Q  486 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||||||||||||||||   ||||||||||||||||| || || |||||| | |||||||||||||    
T  37889908 gtttcccaccatgggaaagcgaattttgaccattagattaactaaagaacacagttttatcatagac 37889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 49420084 - 49420150
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||| |||||||||||||||||| |||||||||||||  ||||||||  |  |||||||||||||||    
T  49420084 ggtgaggtttagtatgggaaaggaaagttgtttcccatgatgggaaagctttttttgaccattagat 49420150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 6766974 - 6767075
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||||||||| |||||| | |||||| ||| ||||| ||| ||  |||| |||||||||| || || ||| |||| | |||||||||||||||    
T  6766974 ggtggagtttagtatggaaaaggggaattgttttccatcatggaaaagttttttttaaccattagatcaaatatagaccataatattatcatagacactc 6767073  T
Q  557 ac 558  Q
    ||    
T  6767074 ac 6767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 42384195 - 42384102
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||  | |||||||| | ||||||||| ||  || ||||||||||||  | ||  |||||| |||||||||||||||||||    
T  42384195 tttagtatgggaaaggatacttgtttcctatcatgggaaagttttttctgaccattagatttaataaggaacatgcttttatcatagacactca 42384102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 17198872 - 17198924
Alignment:
Q  103 atttcattatagtatcttatgtttatagtttatactaagattttgttttgaac 155  Q
    |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  17198872 atttaattatactattttaggtttatattttatactaagattttgttttgaac 17198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 493
Target Start/End: Complemental strand, 49421003 - 49420967
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttccca 493  Q
    |||| ||||||||||||||||||||||||||||||||    
T  49421003 ggtgaggtttagtatgggaaagggaagttgtttccca 49420967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 529
Target Start/End: Complemental strand, 11032254 - 11032195
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 529  Q
    ||||||||||| | | |||||||||||||||||| || | |||||||||||||| |||||    
T  11032254 atgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagta 11032195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 523
Target Start/End: Original strand, 27418163 - 27418229
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||| ||||||||||||||||||||| |||||||||||||||  ||| | | |||| ||||||||||    
T  27418163 aggtgaggtttagtatgggaaagggaa-ttgtttcccaccatgaaaaagtaatttttaaccattagat 27418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 30466187 - 30466242
Alignment:
Q  462 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgacca 517  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |  ||||||||||    
T  30466187 ggtttagcatgggaatggggagttgtttcccaccatgggaaagtagattttgacca 30466242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 41884278 - 41884231
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| |||| |||||||| |||||||||||||| |||||    
T  41884278 aggtggggtttagcatggaaaagggaaattgtttcccaccataggaaa 41884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 43317165 - 43317118
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| ||||||| | |||||||||||||| |||||||||    
T  43317165 aggtggggtttagcatgggaatgagaagttgtttcccatcatgggaaa 43317118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 45922231 - 45922278
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||    
T  45922231 aggtggagtttaacatgggaaagggaggttgtttcccaccatgggaaa 45922278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 523
Target Start/End: Original strand, 47334198 - 47334265
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||  ||| |||||| ||||||||||||| |||||||| || ||| || |||||||||    
T  47334198 aggtggggtttagcctggaaaaggggagttgtttcccacaatgggaaagttgattatgtccattagat 47334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 48835146 - 48835099
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| ||||||||||| | |||||| |||||||||||||    
T  48835146 aggtggggtttagcatgggaaaggggaattgttttccaccatgggaaa 48835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 294625 - 294671
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||||    
T  294625 ggtggcgtttagtatgggaatggggagttttttcccaccatgggaaa 294671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 42646086 - 42646040
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||||||||||||||||| |||| |||  ||||||||    
T  42646086 ggtggggtttagtatgggaaagggaagtagttttccataatgggaaa 42646040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 6246784 - 6246884
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6246784 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacatacttttatcatagacactc 6246883  T
Q  557 a 557  Q
    |    
T  6246884 a 6246884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 6247519 - 6247418
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatac-ttttatcatagacact 555  Q
    ||||| ||||| | |||||||||||||||||||| || |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6247519 ggtggcgtttaatttgggaaagggaagttgtttctcatcatgggaaaactaattttgatcattagataaagtagagaacatactttttatcatagacact 6247420  T
Q  556 ca 557  Q
    ||    
T  6247419 ca 6247418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 474 - 631
Target Start/End: Complemental strand, 15481601 - 15481443
Alignment:
Q  474 gaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga-nnnnnnn 571  Q
    ||||||||||||||||||||| ||||||||| |||||||||||  ||||| || ||||||||||| |||||||||||| |||| ||||||||            
T  15481601 gaaagggaagttgtttcccacaatgggaaaactaattttgaccggtagattaaatagagaacatatttttatcatagaaactcaacaccagatttttttt 15481502  T
Q  572 ccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcttctca 631  Q
    |||||||||||| || |||||||||||| |||||| |||||| ||||||||||| |||||    
T  15481501 ccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctca 15481443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 10421615 - 10421461
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga--nnn 567  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||||||| ||||||||         
T  10421615 tgggaaagggaagttgttttccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 10421516  T
Q  568 nnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttct 623  Q
        |||||||||||| || |||||||||||| ||||||  ||||| |||||||||    
T  10421515 ttttccacactcaccactcaacaacaacatgc-actgctatttcaactctctttct 10421461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 47523662 - 47523529
Alignment:
Q  30 ttctgaaggaaattaattggggagttatgatttattttgataagtttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtttata 129  Q
    |||| |||||||| |||||| |||||| |||||||||||||||| |||||||||||||   |||||||||||||||| |||||||||| ||||           
T  47523662 ttctcaaggaaataaattggagagttaggatttattttgataagcttttactgagtaacaattatgttaaatcatttaattatagtat-ttat------- 47523571  T
Q  130 gtttatactaagattttgttttgaacatataaaataagattg 171  Q
    ||||||||| ||||||| |||| |||||||||||||||||||    
T  47523570 gtttatactgagattttattttaaacatataaaataagattg 47523529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 457 - 526
Target Start/End: Complemental strand, 232097 - 232028
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagataaa 232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 55159647 - 55159733
Alignment:
Q  46 ttggggagttatgatttattttgataagt-ttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtttatagt 131  Q
    ||||||||||| ||||||||||||||||  ||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  55159647 ttggggagttaggatttattttgataagcattttattgggtaattgttatgttaaatcatttgattgtagtatcttatgtttatagt 55159733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 631
Target Start/End: Original strand, 15481049 - 15481210
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acacc-agannnn 568  Q
    |||| |||||||||||||||||  |||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||| ||| ||||| | |        
T  15481049 tggggaagggaagttgtttcccgtcatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagactctcaacaccaaaaaaaa 15481148  T
Q  569 nnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcttctca 631  Q
       |||||||||||| || |||||||||||| |||||| |||||| ||||||||||| |||||    
T  15481149 attccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctca 15481210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 551
Target Start/End: Complemental strand, 6680389 - 6680296
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 551  Q
    ||||||||||| |||||||||||||   ||||| |||||||||||| | ||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  6680389 gtggggtttagcatgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacatagttttatcataga 6680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 50710435 - 50710365
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||||||   |||||||||||||||||    
T  50710435 tttcccaccatgggaaagtaaatattgaccattagataaagtagagaacatgaatttatcatagacactca 50710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 53664242 - 53664312
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  53664242 tttcccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactca 53664312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 557
Target Start/End: Original strand, 10420966 - 10421017
Alignment:
Q  506 taattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10420966 taattttgaccattagataaactagataacatacttttatcatagacactca 10421017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 557
Target Start/End: Original strand, 30808634 - 30808721
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||  |||||||||||||||||||||| |||| |||||||||||||| |||||  ||| | | | ||||||||||||||||    
T  30808634 atgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcatagacactca 30808721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 557
Target Start/End: Complemental strand, 45331484 - 45331401
Alignment:
Q  474 gaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  45331484 gaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 45331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 231435 - 231504
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaa 526  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||  ||||||||||||    
T  231435 aggtggggtttagtatgggaaagggaagttgttttctaccatggg-aaagtaattttatccattagataaa 231504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 534
Target Start/End: Complemental strand, 33370924 - 33370846
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaa 534  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||| ||||| ||  ||||||||| ||||||||||    
T  33370924 aggtggggtttagcatgggaaaggatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaa 33370846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 470 - 557
Target Start/End: Complemental strand, 30809540 - 30809453
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||| |||||||| |||||||| |||| |||| |||||||| ||||| |||||  ||||| | ||||||||||||| ||||    
T  30809540 atgggaaaggggagttgttttccaccatgagaaagttaaatttgaccactagattaagtaatgaacacatttttatcatagactctca 30809453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 553
Target Start/End: Original strand, 13856645 - 13856687
Alignment:
Q  511 ttgaccattagataaagtagagaacatacttttatcatagaca 553  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  13856645 ttgaccattagataaagtagagaacatacctttatcatagaca 13856687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 25970106 - 25970152
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  25970106 ggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaa 25970152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 557
Target Start/End: Original strand, 50709713 - 50709759
Alignment:
Q  511 ttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  50709713 ttgactattagataaagtagagaacatagttttatcatagacactca 50709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 549
Target Start/End: Original strand, 23383309 - 23383402
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    ||||||||||||| ||| ||||||  |||||||||||||||||||||| ||||||||  ||||| ||| || |  |||||| ||| ||||||||    
T  23383309 aggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcata 23383402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 512
Target Start/End: Original strand, 54453093 - 54453150
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaatttt 512  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||| ||||||| ||||    
T  54453093 taggtggggtttagcatgggaatgggaagttgtttcccatcatggaaaaattattttt 54453150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 548
Target Start/End: Original strand, 33463676 - 33463768
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 548  Q
    ||||||||||||| ||||||||||||| |||||| |||  ||||||||||| |||||| ||||| ||| || || ||| || ||| |||||||    
T  33463676 aggtggggtttagaatgggaaagggaatttgttttccatgatgggaaaattgattttggccatttgattaaataaagagcacactattatcat 33463768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 34155676 - 34155608
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |   |||||||||||||||    
T  34155676 taggtggggtttagcatgggaaagggaacttgttttccaccatggaaaagtattttttgaccattagat 34155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 557
Target Start/End: Original strand, 34371459 - 34371562
Alignment:
Q  453 tctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    |||| ||||||||||  ||||||||||| | |||||||||||||||||||| ||  ||||| |||||||||  ||||   |||||| ||||||||| |||    
T  34371459 tctaagtggggtttaa-atgggaaaggggaattgtttcccaccatgggaaagttttttttgtccattagattgagtaagaaacataattttatcatggac 34371557  T
Q  553 actca 557  Q
    |||||    
T  34371558 actca 34371562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 529
Target Start/End: Original strand, 45330578 - 45330637
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 529  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||||| ||||| |||||    
T  45330578 atgggaaaggggagttgtttcccaccatggaaaagttaaatttgaccactagattaagta 45330637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 54006727 - 54006774
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  54006727 aggtgaggtttagtatgggaatgggaagttgtttcccatcatgggaaa 54006774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 51412592 - 51412626
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgttt 489  Q
    |||||||||||||||||||||||||||||||||||    
T  51412592 taggtggggtttagtatgggaaagggaagttgttt 51412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 53665104 - 53665034
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||   ||| | ||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  53665104 tttcccaccataaaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactca 53665034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 47523537 - 47523476
Alignment:
Q  209 ataagattgtaacttcatagtcataataagcaaaattgaacaaaattaatttcctaatttag 270  Q
    ||||||||||||||| ||| ||||||  ||||||| ||||||||| ||||| ||||||||||    
T  47523537 ataagattgtaacttgataatcataactagcaaaactgaacaaaactaattccctaatttag 47523476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 34154792 - 34154840
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| |||||||| | || ||||||||||||||||||||    
T  34154792 taggtggggtttagcatgggaaaagaaacttgtttcccaccatgggaaa 34154840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 41261940 - 41261892
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||||||||||||| |  |||||||||| |||||||||||    
T  41261940 taggtggggtttagtatgggaaatgagagttgtttcctaccatgggaaa 41261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 54008504 - 54008456
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||| ||||||||||||||| |||||||||||||| | |||||||||    
T  54008504 taggtgaggtttagtatgggaatgggaagttgtttccaatcatgggaaa 54008456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 552
Target Start/End: Complemental strand, 2093924 - 2093865
Alignment:
Q  493 accatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagac 552  Q
    ||||||||||| ||| | |||| |||||||| || || ||||||||||||||||||||||    
T  2093924 accatgggaaagttattattgatcattagatcaaatatagaacatacttttatcatagac 2093865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 498
Target Start/End: Complemental strand, 20351361 - 20351318
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatg 498  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  20351361 taggtggggtttagtatgggaatggagagttgtttcccaccatg 20351318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 535
Target Start/End: Original strand, 33369908 - 33369987
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 535  Q
    ||||||| ||||| |||||||| |  | |||||||||||||||||||| ||||| ||  ||||||||| | |||||||||    
T  33369908 aggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaac 33369987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 34956313 - 34956384
Alignment:
Q  486 gtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||  || ||||| |||||||||||| |||||| ||||| |||||| | ||||||||||||| ||||    
T  34956313 gtttcccattataggaaagttaattttgacccttagatcaagtaaagaacacatttttatcatagactctca 34956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 39429986 - 39429939
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| ||||||| ||  ||||||||||||||||||||||    
T  39429986 aggtggggtttagcatgggaatggagagttgtttcccaccatgggaaa 39429939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 41261121 - 41261168
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||||    
T  41261121 aggtgaggtttagcatgggaaaggaaagttgttttccaccatgggaaa 41261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 503
Target Start/End: Complemental strand, 55514395 - 55514356
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  55514395 tttagcatgggaaaggaaagttgtttcccaccatgggaaa 55514356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 32449317 - 32449383
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||| ||||||||||||||||  | |||||||||||||||| |||||   ||||||| |||||||    
T  32449317 ggtgggatttagtatgggaaaggatacttgtttcccaccatggaaaaatattttttgacaattagat 32449383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 47326837 - 47326791
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| || ||| |||||||||| |||||||||||||||||||||||    
T  47326837 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaa 47326791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 47341633 - 47341587
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| || ||| |||||||||| |||||||||||||||||||||||    
T  47341633 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaa 47341587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 557
Target Start/End: Original strand, 50709034 - 50709092
Alignment:
Q  499 ggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||| |||||||||||| |||||| ||||| |||||| | ||||||||||||| ||||    
T  50709034 ggaaagttaattttgacccttagatcaagtaaagaacacatttttatcatagactctca 50709092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 22062274 - 22062233
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatg 498  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  22062274 ggtggggtttagtatggaaaaggggaattgtttcccaccatg 22062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 25655689 - 25655620
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagat 523  Q
    ||||||||||||| | ||||||||   |||| ||||||||||||||||| |||  |||||||||||||||    
T  25655689 taggtggggtttaatttgggaaagactagttttttcccaccatgggaaagttagtttttgaccattagat 25655620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 36451474 - 36451409
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||||||| ||||||||| | ||||||||| |||||||| ||| || ||| || |||||||||    
T  36451474 gtggggtttagcatgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagat 36451409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 3847916 - 3847988
Alignment:
Q  487 tttcccaccatgggaaaat-taattttgaccattagataaagtagagaacatacttttatcatagacactcac 558  Q
    ||||||||||||||||| | |  ||||||||||||||| || || ||| |||| | |||||||||||||||||    
T  3847916 tttcccaccatgggaaagtatttttttgaccattagatcaaatatagaccataatgttatcatagacactcac 3847988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 11680276 - 11680356
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 536  Q
    |||| |||||| | |||||||||  |||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  11680276 ggtgaggtttaatttgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 11680356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 11688555 - 11688635
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 536  Q
    |||| |||||| | |||||||||  |||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  11688555 ggtgaggtttaatttgggaaaggttagttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 11688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 12590251 - 12590171
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 536  Q
    ||||||||||| | |||||||||  |||| ||| ||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  12590251 ggtggggtttaatttgggaaaggctagtttttttccaccatgggaaagttagtttttgaccattagattaaatagggaaca 12590171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 22061328 - 22061376
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||| ||||||| || |||| |||||||||||| |||||||||||||    
T  22061328 taggtgaggtttagcattggaaggggaagttgttttccaccatgggaaa 22061376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 23425257 - 23425209
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||  ||||||||||||| ||  ||||||||||||||||||||||    
T  23425257 taggtggcatttagtatgggaatggagagttgtttcccaccatgggaaa 23425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 25970853 - 25970805
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||  |||||||||||||| || ||||||||||||||||| ||||    
T  25970853 taggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaa 25970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 503
Target Start/End: Complemental strand, 47377632 - 47377600
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||| ||||||||||||||||||||||    
T  47377632 tgggaaaggggagttgtttcccaccatgggaaa 47377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 456 - 631
Target Start/End: Complemental strand, 38337526 - 38337349
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    |||||| ||||| | |||||||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||||||    
T  38337526 aggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacact 38337427  T
Q  556 c-acaccaga--nnnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcttctca 631  Q
    | ||||||||         |||||||||||| || |||||||||||| |||||| |||||| ||||||||||| |||||    
T  38337426 caacaccagatttttttttccacactcaccactcaacaacaacatgc-actgctacttcaactctctttcttcctctca 38337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 55124414 - 55124508
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 551  Q
    |||||||||||| |||||||||||||   |||||||||||||||||||| ||| ||||| ||||||| | ||| |||||||| ||||||||||||    
T  55124414 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaaataaatattgactattagatcatgtaaagaacatagttttatcataga 55124508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 547
Target Start/End: Original strand, 38336958 - 38337034
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatca 547  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||    
T  38336958 tggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatca 38337034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 33968181 - 33968247
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||||    
T  33968181 ggtggggtttagcatgggaaagggaacttgtttcccaccatgggaaaatattttttgaccattagat 33968247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 15450239 - 15450318
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    |||||||||||||   |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  15450239 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 15450318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 44022128 - 44022035
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattaga-taaagtagagaacatacttttatcatagacactca 557  Q
    ||||| |||| |||||  |||||||| ||||||||||||||  || ||||||||||||| |||| ||| |||||||||||||||||| |||||||    
T  44022128 tttagcatggaaaaggagagttgttttccaccatgggaaaaaaaaatttgaccattagattaaactag-gaacatacttttatcatacacactca 44022035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 45297549 - 45297615
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||  |||| ||||||||||    
T  45297549 ggtggggtttagtatgggaaaggagagttgtttcccatcatgggaaagttttttttaaccattagat 45297615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 513
Target Start/End: Original strand, 8439477 - 8439539
Alignment:
Q  451 aatctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttg 513  Q
    |||||||||||||||||||||||| ||| | || | ||||||||||||||||| || ||||||    
T  8439477 aatctaggtggggtttagtatgggtaagtggagatttttcccaccatgggaaagtttattttg 8439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 550
Target Start/End: Complemental strand, 49161857 - 49161763
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    ||||| ||||||| ||||||||||| | |||||||||||||||||||| ||  || ||| |||||||| | |||  ||||||| | |||||||||    
T  49161857 aggtgaggtttagcatgggaaaggggaattgtttcccaccatgggaaagttttttatgagcattagatcatgtaaggaacataatattatcatag 49161763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 470 - 523
Target Start/End: Original strand, 27452636 - 27452689
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||||||||| | |||||| ||||||| |||||||| ||||||||||||||    
T  27452636 atgggaaagggaaatagtttcctaccatggaaaaattaaatttgaccattagat 27452689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 536
Target Start/End: Original strand, 33454864 - 33454945
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    |||||||||||||| |||||||||| || ||||||||||||||| |||| ||  |||| ||  |||||| ||||| ||||||    
T  33454864 taggtggggtttagcatgggaaaggaaaattgtttcccaccatgagaaagttttttttaacggttagattaagtaaagaaca 33454945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 503
Target Start/End: Complemental strand, 45501337 - 45501296
Alignment:
Q  462 ggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
T  45501337 ggtttagtatgggaaaggggagttgttttccaccatgggaaa 45501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 549
Target Start/End: Complemental strand, 49288724 - 49288631
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    |||||||||||||||||||||||  ||||||| |||||||||| ||||  ||||||  ||  |||||| ||||| | |||||| | ||||||||    
T  49288724 aggtggggtttagtatgggaaagcaaagttgtctcccaccatgagaaagctaatttaaacggttagattaagtataaaacatagtcttatcata 49288631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 8652808 - 8652872
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatt 519  Q
    |||||||||||||| ||||||||||| | | | |||||||||||||||| | |||||| ||||||    
T  8652808 taggtggggtttagcatgggaaaggggaatcggttcccaccatgggaaagtaaattttcaccatt 8652872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 20313472 - 20313412
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaatt-aattttgaccattagat 523  Q
    |||||||||||||||||||||  ||||||| ||||||||||||  ||||| ||||||||||    
T  20313472 tttagtatgggaaagggaagtattttcccatcatgggaaaattggatttttaccattagat 20313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 33455831 - 33455783
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| ||||||||||| | |||||||||||||| |||||    
T  33455831 taggtggggtttagcatgggaaaggggaattgtttcccaccataggaaa 33455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 44021284 - 44021331
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  44021284 taggtggggtttagcatgggaaaga-aagttgtttcccaccatgggaaa 44021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 499
Target Start/End: Original strand, 49160985 - 49161029
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgg 499  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||    
T  49160985 taggtggggtttagcatgggaaaggggagttgtttcctaccatgg 49161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 549
Target Start/End: Original strand, 49287687 - 49287779
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    |||||| |||| ||| ||||||  ||||||||||| || ||||||||||||||||  ||  |||||| ||||| |||||||| | ||||||||    
T  49287687 ggtgggatttaatataggaaagtaaagttgtttcctactatgggaaaattaatttaaacggttagattaagtatagaacatagtcttatcata 49287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 51421724 - 51421660
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 520  Q
    ||||||||||||| ||| ||||||| | |||||||||||||||||||| | |||||  |||||||    
T  51421724 aggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccatta 51421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 44064188 - 44064235
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  44064188 aggtggggtatagtatggaaaagggaagttctttcccatcatgggaaa 44064235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 549
Target Start/End: Complemental strand, 44406982 - 44406915
Alignment:
Q  482 agttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    |||||||||||||||||||||| | ||||||  ||||||||| || |  ||| |||||||||||||||    
T  44406982 agttgtttcccaccatgggaaagtaaattttacccattagatcaaatgaagaccatacttttatcata 44406915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 11267704 - 11267642
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    ||||| ||||||||||||| |||||| |||||||||| || || ||| |||||| ||||||||    
T  11267704 tttcctaccatgggaaaataaattttaaccattagattaaataaagagcatactcttatcata 11267642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 493
Target Start/End: Original strand, 36232866 - 36232904
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttccca 493  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  36232866 taggtggggtttagtatgggaaaggaaagttctttccca 36232904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 52399069 - 52398999
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaa 534  Q
    ||||| |||| ||||||||   |||||||| ||||||||| | ||||||||||||||||| || |||||||    
T  52399069 tttagcatggaaaagggaaagagtttcccatcatgggaaagtaaattttgaccattagattaaatagagaa 52398999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 42108370 - 42108410
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccat 497  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  42108370 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 52398330 - 52398402
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    ||||| |||| ||||||||   |||||||||||||| ||| | |||||| |||||||||| || |||||||||    
T  52398330 tttagaatggaaaagggaaagagtttcccaccatggaaaagtaaattttaaccattagattaaatagagaaca 52398402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 548
Target Start/End: Complemental strand, 54901464 - 54901372
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 548  Q
    ||||||||||||| ||| ||||||||| |||||| |||  |||||||| || |||||| ||||| ||| || || ||| || ||| |||||||    
T  54901464 aggtggggtttagaatgagaaagggaatttgttttccatgatgggaaacttgattttggccatttgattaaataaagagcacactattatcat 54901372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 12350703 - 12350602
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    |||||| ||||| | |||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12350703 aggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacatacttttatcatagacact 12350604  T
Q  556 ca 557  Q
    ||    
T  12350603 ca 12350602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 12349967 - 12350067
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  12349967 ggtggcgtttaatttgggaaagggaagttgtttcccaccatggaaaaactaattttaaccattagataaagtaaagaacatgcttttatcatagacactc 12350066  T
Q  557 a 557  Q
    |    
T  12350067 a 12350067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 43971278 - 43971378
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||||||||| || | ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43971278 ggtggcgtttagtatggaaatgagaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 43971377  T
Q  557 a 557  Q
    |    
T  43971378 a 43971378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 457 - 631
Target Start/End: Complemental strand, 43925066 - 43924890
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  43925066 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacatatttttatcatagacactc 43924967  T
Q  557 -acaccaga--nnnnnnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcttctca 631  Q
     ||||||||         |||||||||||| || |||||||||||| || ||| |||||| ||||||| ||| |||||    
T  43924966 aacaccagatttttttttccacactcaccactcaacaacaacatgc-accgctacttcaactctcttttttcctctca 43924890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 43972134 - 43972034
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    |||| ||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  43972134 ggtgaggtttagtatgagaatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactc 43972035  T
Q  557 a 557  Q
    |    
T  43972034 a 43972034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 479 - 557
Target Start/End: Original strand, 39257656 - 39257734
Alignment:
Q  479 ggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  39257656 ggaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactca 39257734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 43924504 - 43924590
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||| |||||||||| |||||||    
T  43924504 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcataaacactca 43924590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 523
Target Start/End: Complemental strand, 40451035 - 40450968
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| | |||||| ||||||||||    
T  40451035 aggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagat 40450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 557
Target Start/End: Original strand, 38686337 - 38686403
Alignment:
Q  491 ccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  38686337 ccaccatgggaaagtaaatattgaccattagataaagtagagaacatggttttatcatagacactca 38686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 33801529 - 33801599
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||| ||| | ||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  33801529 tttcccaccatggaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactca 33801599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 33802391 - 33802321
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||| | ||| |||||||||| ||||| ||||||||||  ||||||||||||||||||    
T  33802391 tttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacatggttttatcatagacactca 33802321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 38687073 - 38687003
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||| |||||||| | ||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  38687073 tttcccacaatgggaaagtaaatattgatcattagataaagtagagaacatgattttatcatagacactca 38687003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 456 - 500
Target Start/End: Original strand, 35943075 - 35943119
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatggg 500  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35943075 aggtggggtttagcatgggaaagggaagttgtttcccaccatggg 35943119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 35840578 - 35840532
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35840578 ggtggggtttagcatgggaaagggaagttgtttcccacgatgggaaa 35840532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 15183853 - 15183796
Alignment:
Q  500 gaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||| ||||||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  15183853 gaaagttaattttgaccattagataaagtagaaaacatgattttatcacagacactca 15183796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 39258491 - 39258397
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    |||| |||||| |||||||| | ||||||||||||| |||      |||||||||| ||||||||||||| || |||||||||||||| | |||||||||    
T  39258491 ggtgaggtttactatgggaatgagaagttgtttcccgcca------aattaattttaaccattagataaactaaagaacatacttttaccgtagacactc 39258398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 520
Target Start/End: Complemental strand, 27322635 - 27322572
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 520  Q
    |||||||||||| |||||||| || ||||||||||||| |||||||| ||| | ||||||||||    
T  27322635 ggtggggtttaggatgggaaatgggagttgtttcccacgatgggaaagttattcttgaccatta 27322572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 37562295 - 37562361
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||| ||||||||||  | |||||||||||||| ||||| | |||||| ||||||||||    
T  37562295 ggtggggtttagcatgggaaaggagaattgtttcccaccataggaaagtcaattttaaccattagat 37562361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 493
Target Start/End: Original strand, 35839722 - 35839758
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttccca 493  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35839722 ggtggggtttagcatgggaaagggaagttgtttccca 35839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 6012967 - 6013014
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaa 502  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  6012967 taggtggggtttagcatggaaaaaggaagttctttcccaccatgggaa 6013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 492
Target Start/End: Original strand, 38660076 - 38660111
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttccc 492  Q
    |||| |||||||||||||||||||||||||||||||    
T  38660076 ggtgaggtttagtatgggaaagggaagttgtttccc 38660111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 33688222 - 33688259
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttccca 493  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  33688222 aggtggagtttagtatgggaaagggaagtagtttccca 33688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 42346155 - 42346107
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| ||||||| ||  |||||||||||| |||||||||    
T  42346155 taggtggggtttagcatgggaatggagagttgtttcccatcatgggaaa 42346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 12907 - 12807
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12907 ggtggcgtttaatttggggaagtgaagttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactc 12808  T
Q  557 a 557  Q
    |    
T  12807 a 12807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 12184 - 12284
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| ||||| | |||||||| ||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  12184 ggtggcgtttaatttgggaaagagaagttgtttcccaccatgagaaaattaattttgaccgttagattaaatagagaacatatttttatcatagacactc 12283  T
Q  557 a 557  Q
    |    
T  12284 a 12284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 4975696 - 4975796
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4975795  T
Q  557 a 557  Q
    |    
T  4975796 a 4975796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 4993604 - 4993704
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4993604 ggtggcgtttagtatgggaatgggaagttgttttccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4993703  T
Q  557 a 557  Q
    |    
T  4993704 a 4993704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 4976554 - 4976453
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    ||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  4976554 aggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacact 4976455  T
Q  556 ca 557  Q
    ||    
T  4976454 ca 4976453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 4994461 - 4994360
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacact 555  Q
    ||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  4994461 aggtgaggtttagtatggggatgagaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacact 4994362  T
Q  556 ca 557  Q
    ||    
T  4994361 ca 4994360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 41519967 - 41519876
Alignment:
Q  463 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacac 554  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  41519967 gtttagtatgggaaagggaagttttttcccaccatgggaaagttttttttgaccgttaaataaagtagagaacatacttttaccatagacac 41519876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 42369643 - 42369743
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||||||||||||||| ||||| ||||||||||   |||||||||| | ||| ||  |||||||||||||||||||||||| |||||||||||||||||    
T  42369643 ggtggggtttagtatggaaaaggaaagttgtttcaatccatgggaaagtaaatattagccattagataaagtagagaacataattttatcatagacactc 42369742  T
Q  557 a 557  Q
    |    
T  42369743 a 42369743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 42370991 - 42370899
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    ||||||||||||| || ||||||||||||||||||||||| | ||| ||| |||||||||||||| ||||| ||| |||||||||||||||||    
T  42370991 tttagtatgggaatggaaagttgtttcccaccatgggaaagtaaatattggccattagataaagtggagaatatagttttatcatagacactc 42370899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 523
Target Start/End: Original strand, 36390955 - 36391023
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  36390955 taggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagat 36391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 473 - 557
Target Start/End: Original strand, 37545692 - 37545776
Alignment:
Q  473 ggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 37545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 5276972 - 5276890
Alignment:
Q  46 ttggggagttatgatttattttgataagt-ttttactgagtaattgttatgttaaatcatttcattatagtatcttatgttta 127  Q
    ||||||||||| |||||||||||||||   |||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||    
T  5276972 ttggggagttaggatttattttgataaacattttactgggtaattgttatgttaaaacatttgattgtagtatcttatgttta 5276890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 36476369 - 36476493
Alignment:
Q  39 aaattaattggggagttatgatttattttgataagtttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtttatagtttatact 138  Q
    |||| |||||| |||||  |||||| ||||||||| |||||||||||||   |||||||||||||||| |||||||||| ||||       |||||||||    
T  36476369 aaataaattggagagttcggatttactttgataagcttttactgagtaacaattatgttaaatcatttaattatagtat-ttat-------gtttatact 36476460  T
Q  139 aagattttgttttgaacatataaaataagattg 171  Q
     |||||||||||| ||||| |||||||||||||    
T  36476461 gagattttgttttaaacatgtaaaataagattg 36476493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 34617652 - 34617724
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagt 528  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  34617652 aggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagattaagt 34617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 557
Target Start/End: Original strand, 8536171 - 8536237
Alignment:
Q  491 ccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||||| | ||| ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  8536171 ccaccatgggaaagtaaatattgacgattagataaagtagagaacatgattttatcatagacactca 8536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 8536904 - 8536834
Alignment:
Q  487 tttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||| ||||||| ||| | ||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  8536904 tttcctaccatggaaaagtaaatgttgaccattagataaagtagagaacatggttttatcatagacactca 8536834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 15602863 - 15602802
Alignment:
Q  462 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||| || |||||||||||||||||||||||||||||||||   |||||||||||||||    
T  15602863 ggtttagcataggaaagggaagttgtttcccaccatgggaaaatattttttgaccattagat 15602802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 24383112 - 24383064
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgttt-cccaccatgggaaa 503  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24383112 aggtggggtttagtatgggaaagggaagttgtttccccaccatgggaaa 24383064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 36391715 - 36391657
Alignment:
Q  462 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 520  Q
    ||||||||||||||||||| |||||||| ||||||||||||| | |||||| |||||||    
T  36391715 ggtttagtatgggaaaggggagttgttttccaccatgggaaagtaaattttaaccatta 36391657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 36719063 - 36718974
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagaca 553  Q
    |||||||||||||||| || |||||||| ||||| |||||  ||||||| ||||||| || || ||   |||||||||||||||||||||    
T  36719063 tttagtatgggaaaggaaacttgtttcctaccataggaaagctaattttaaccattaaattaaataagaaacatacttttatcatagaca 36718974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 7868191 - 7868123
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||| ||||| ||| ||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  7868191 taggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaattttaaccactagat 7868123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 41768768 - 41768712
Alignment:
Q  480 gaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaaca 536  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||| ||||||    
T  41768768 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaaca 41768712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 23876112 - 23876065
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  23876112 aggtggggtttagcatgggaaatgggagttgtttcccaccatgggaaa 23876065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 529
Target Start/End: Complemental strand, 37546599 - 37546540
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagta 529  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||||||| ||||| |||||    
T  37546599 atgggaaaggggagttgtttcccatcatgggaaagttaaatttgaccactagattaagta 37546540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 36476485 - 36476546
Alignment:
Q  209 ataagattgtaacttcatagtcataataagcaaaattgaacaaaattaatttcctaatttag 270  Q
    ||||||||||||||| ||| ||||||  ||||||| ||||||||| ||||| ||||||||||    
T  36476485 ataagattgtaacttgataatcataactagcaaaactgaacaaaactaattccctaatttag 36476546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 6085751 - 6085703
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| ||||||||||  |||||||||| |||||||||||    
T  6085751 taggtggggtttagcatgggaaaggtgagttgtttcctaccatgggaaa 6085703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 38740438 - 38740489
Alignment:
Q  451 aatctaggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||| ||||||| |||||||||| |||| |||||||||||||||||    
T  38740438 aatctaggtggcgtttagtctgggaaaggggagtt-tttcccaccatgggaaa 38740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 558
Target Start/End: Original strand, 41042572 - 41042644
Alignment:
Q  487 tttcccaccatgggaaaat-taattttgaccattagataaagtagagaacatacttttatcatagacactcac 558  Q
    ||||||||||||||||||| |  ||||||||||||||| || || ||| |||| | |||||||||||||||||    
T  41042572 tttcccaccatgggaaaatatttttttgaccattagatcaaatatagaccataatgttatcatagacactcac 41042644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 2307121 - 2307075
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||| ||||||| |||||||||||||||||||| |||||||| ||||    
T  2307121 ggtgaggtttagcatgggaaagggaagttgttttccaccatgagaaa 2307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 23875245 - 23875333
Alignment:
Q  462 ggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    ||||||| ||||||||||| | ||||||| || ||||||||| ||  || |||||||||||| | |||  ||||||| | |||||||||    
T  23875245 ggtttagcatgggaaaggggaattgtttcgcatcatgggaaagttttttatgaccattagatcatgtaaggaacataatattatcatag 23875333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 523
Target Start/End: Complemental strand, 30545469 - 30545417
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||||||||||||  |||||||| ||  |||| ||||||||||    
T  30545469 tgggaaagggaagttgtttcccatgatgggaaagttttttttaaccattagat 30545417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 44094865 - 44094825
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccat 497  Q
    |||||| ||||| |||||||||| |||||||||||||||||    
T  44094865 ggtgggatttagcatgggaaaggaaagttgtttcccaccat 44094825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 46757428 - 46757524
Alignment:
Q  461 gggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    |||||||||||||||||| | |||||||| |||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  46757428 gggtttagtatgggaaagaggagttgttttccaccatgagaaagtaaatattgaccattagataaagtagagaacataattttatcatagacactca 46757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 12732247 - 12732347
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc 556  Q
    |||||||||||| |||||||||||||   |||||||||||||||||| | ||| ||||||||||||| | ||| |||||||| ||||||||||||| |||    
T  12732247 ggtggggtttagcatgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacatagttttatcatagactctc 12732346  T
Q  557 a 557  Q
    |    
T  12732347 a 12732347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 557
Target Start/End: Original strand, 27599224 - 27599311
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||  ||||| | | ||||||||||||||||    
T  27599224 atgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactca 27599311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 541
Target Start/End: Complemental strand, 46759303 - 46759226
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatactt 541  Q
    ||||||||||||||||| |||||||||||| ||| | |||  |||| |||||||||||||||||||||||||||||||    
T  46759303 tttagtatgggaaaggggagttgtttcccatcatagcaaagctaatcttgaccattagataaagtagagaacatactt 46759226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 523
Target Start/End: Original strand, 24995851 - 24995918
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |   |||||||||||||||    
T  24995851 aggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagat 24995918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 557
Target Start/End: Complemental strand, 27600130 - 27600043
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactca 557  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||  ||||| | | ||||||||||| ||||    
T  27600130 atgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctca 27600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 32548721 - 32548643
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaac 535  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||| ||||| ||  ||||||||| |||||||||||    
T  32548721 ggtggggtttagtatgggaaatgatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 32548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 456 - 500
Target Start/End: Complemental strand, 6730206 - 6730162
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatggg 500  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  6730206 aggtggggtttagcatgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 523
Target Start/End: Original strand, 42607079 - 42607147
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||| ||  ||||| |||||||||    
T  42607079 taggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagat 42607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 35771307 - 35771261
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  35771307 ggtggggtttagtatgggaaagcaaagttgtttcccaccatgggaaa 35771261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 32871188 - 32871095
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    |||||||||||| ||||||| ||| |||||||||||||||| ||||| ||  ||| ||||||| ||| | ||| |||||||| | |||||||||    
T  32871188 ggtggggtttagcatgggaatggggagttgtttcccaccataggaaagtttttttggaccatttgatcatgtaaagaacataatattatcatag 32871095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 24996725 - 24996665
Alignment:
Q  463 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||| ||||||||||| |||||||||||||||||||||| |   |||||||||||||||    
T  24996725 gtttagcatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagat 24996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 29060788 - 29060741
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  29060788 aggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaa 29060741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 5064694 - 5064647
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||||||||||| ||||||| |||||||| ||||||| |||||||||    
T  5064694 aggtggggtttagcatgggaatgggaagttctttcccatcatgggaaa 5064647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 499
Target Start/End: Original strand, 9122657 - 9122692
Alignment:
Q  464 tttagtatgggaaagggaagttgtttcccaccatgg 499  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9122657 tttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 549
Target Start/End: Original strand, 30915759 - 30915826
Alignment:
Q  482 agttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcata 549  Q
    |||||||||||||||||||||| | ||||||  ||||||||| || |  ||| |||||||||||||||    
T  30915759 agttgtttcccaccatgggaaagtaaattttacccattagatcaaatgaagaccatacttttatcata 30915826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 40320459 - 40320416
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgg 499  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  40320459 aggtggggtttagcatgggaaaggagagttgtttcccaccatgg 40320416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 14629819 - 14629865
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    ||||| ||||||||||||||||||||||| ||| ||| |||||||||    
T  14629819 ggtggagtttagtatgggaaagggaagttcttttccatcatgggaaa 14629865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 36844612 - 36844658
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  36844612 ggtggggtttagcatgggaaaggtgagttgtttcccaccatgagaaa 36844658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 40257580 - 40257646
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    ||||||||||||||||||||| |  |||||||| | ||||||| ||| ||| ||||| |||||||||    
T  40257580 ggtggggtttagtatgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagat 40257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 40319606 - 40319652
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||||||||| ||  |||| |||||||||||||||||    
T  40319606 ggtggggtttagtatgggaatggagagttatttcccaccatgggaaa 40319652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 35770276 - 35770328
Alignment:
Q  459 tggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattt 511  Q
    |||||||||||||| |||||  || |||||||||||||||| ||| |||||||    
T  35770276 tggggtttagtatgagaaagtaaaattgtttcccaccatggtaaagttaattt 35770328  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 40257844 - 40257784
Alignment:
Q  463 gtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||| |||||||| || ||||||||||||||||| |||| ||  ||||| |||||||||    
T  40257844 gtttagcatgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagat 40257784  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 551
Target Start/End: Complemental strand, 40258784 - 40258688
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcataga 551  Q
    ||||||| |||||| |||||||| |  | ||||||| |||||||||||| |  |||| |||||||| || || || | |||||| ||||||||||||    
T  40258784 taggtggagtttagcatgggaaatgataattgtttctcaccatgggaaagtagatttagaccattaaattaattaaataacatatttttatcataga 40258688  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 42607862 - 42607798
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatt 519  Q
    |||||||||||||| |||| |||||| | |||||||||| ||| ||||| ||| ||||| |||||    
T  42607862 taggtggggtttagcatggaaaaggggaattgtttcccatcataggaaagttatttttgtccatt 42607798  T

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Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 471 - 631
Target Start/End: Original strand, 27763427 - 27763588
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatagacactc-acaccaga-nnnn 568  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| || ||||||||||| |||||||| |||||||| ||||||||         
T  27763427 tggggaagggaagttgtttcccaccaagggaaaactaattttgaccgttagattaaatagagaacatatttttatcaaagacactcaacaccagattttt 27763526  T
Q  569 nnnccacactcaccattcgacaacaacatgcgactgctgcttcaagtctctttcttcttctca 631  Q
       |||||||||||| || |||||||||||| || ||| |||||| ||||||||||| |||||    
T  27763527 tttccacactcaccactcaacaacaacatgc-accgctacttcaactctctttcttcctctca 27763588  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 9574152 - 9574066
Alignment:
Q  46 ttggggagttatgatttattttgataagt-ttttactgagtaattgttatgttaaatcatttcattatagtatcttatgtttatagt 131  Q
    ||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  9574152 ttggggagttaggatttattttgataagcattttactgggtaattgttatgttaaaacatttgattgtagtatcttatgtttatagt 9574066  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 25371169 - 25371235
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagat 523  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||||||||    
T  25371169 ggtggggtttagcatgggaaagtgaacttgtttcccaccatgggaaaatattttttgaccattagat 25371235  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 8384066 - 8384018
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaat 505  Q
    |||||||||||| ||||||||| | |||||||||||||||||| |||||    
T  8384066 ggtggggtttagcatgggaaagtggagttgtttcccaccatggaaaaat 8384018  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 500
Target Start/End: Original strand, 16764925 - 16764968
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatggg 500  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||    
T  16764925 ggtggagtttagcatgggaaaggaaagttgtttcccaccatggg 16764968  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 548
Target Start/End: Original strand, 34034181 - 34034259
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcat 548  Q
    ||||||||||  | ||| |||||||||||||||| ||| |||  |||||| ||| || ||||||||||| |||||||||    
T  34034181 atgggaaaggagaattgcttcccaccatgggaaagttattttaaaccattggatcaaatagagaacatagttttatcat 34034259  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 536
Target Start/End: Complemental strand, 10608369 - 10608288
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatta-attttgaccattagataaagtagagaaca 536  Q
    |||||||||||| | |||||||||   ||| ||||||||||||||||| |||  ||||||||||||||| || ||| |||||    
T  10608369 aggtggggtttaatttgggaaaggctggttttttcccaccatgggaaagttagtttttgaccattagattaaatagggaaca 10608288  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 29290123 - 29290184
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccat 518  Q
    |||||||||||| |||| || ||  |||||||||||||||||||||| ||||| || |||||    
T  29290123 ggtggggtttagcatggaaatggagagttgtttcccaccatgggaaagttaatgttaaccat 29290184  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 4311236 - 4311192
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatggga 501  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||    
T  4311236 ggtggcgtttagtatgggtaagtgaagttttttcccaccatggga 4311192  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 503
Target Start/End: Original strand, 24125986 - 24126018
Alignment:
Q  471 tgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||| ||||||||||||||||||||||    
T  24125986 tgggaaaggggagttgtttcccaccatgggaaa 24126018  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 25067900 - 25067852
Alignment:
Q  455 taggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaa 503  Q
    |||||||||||||| ||||||||||  | |||||||||||||| |||||    
T  25067900 taggtggggtttagcatgggaaaggatatttgtttcccaccataggaaa 25067852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 544
Target Start/End: Complemental strand, 34035093 - 34035005
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatactttta 544  Q
    |||||| |||||  ||||||||||  | |||||||||| ||||||||| ||| |||  |||||| ||| || ||||||||||| |||||    
T  34035093 aggtggagtttaacatgggaaaggagaattgtttcccatcatgggaaagttattttaaaccattggatcaaatagagaacatagtttta 34035005  T

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Target: scaffold0071 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 550
Target Start/End: Complemental strand, 11952 - 11873
Alignment:
Q  470 atgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    |||||||||||||   |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  11952 atgggaaagggaaagagtttcc-accatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 11873  T

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Target: scaffold2003 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 550
Target Start/End: Complemental strand, 580 - 486
Alignment:
Q  456 aggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccattagataaagtagagaacatacttttatcatag 550  Q
    ||||||| || || ||||||||||| |||||||||||||||||| ||| | |||||| |||| ||||| || || ||| || |||||||||||||    
T  580 aggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagtaaattttaaccactagatcaaataaagagcacacttttatcatag 486  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 520
Target Start/End: Complemental strand, 43266 - 43203
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaattaattttgaccatta 520  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||| | ||| || |||||||    
T  43266 ggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaagtaaatcttaaccatta 43203  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 499
Target Start/End: Original strand, 14012 - 14054
Alignment:
Q  457 ggtggggtttagtatgggaaagggaagttgtttcccaccatgg 499  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||    
T  14012 ggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 36664 - 36620
Alignment:
Q  481 aagttgtttcccaccatgggaaaattaattttgaccattagataa 525  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||    
T  36664 aagttgtttcccactatgggaaaactaattttgactgttagataa 36620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 15106 - 15058
Alignment:
Q  458 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaaatt 506  Q
    |||| |||||| ||||||| | |||||| ||||||||||||||||||||    
T  15106 gtggagtttagcatgggaatgagaagttctttcccaccatgggaaaatt 15058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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