View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6911_low_1 (Length: 749)

Name: NF6911_low_1
Description: NF6911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6911_low_1
NF6911_low_1
[»] chr7 (60 HSPs)
chr7 (10-730)||(39123360-39124081)
chr7 (518-680)||(40463855-40464011)
chr7 (519-681)||(47716438-47716597)
chr7 (518-680)||(42805502-42805661)
chr7 (518-680)||(21172009-21172164)
chr7 (518-681)||(10693072-10693228)
chr7 (518-680)||(43557450-43557610)
chr7 (518-680)||(32758239-32758394)
chr7 (522-680)||(42391100-42391251)
chr7 (518-669)||(2541030-2541177)
chr7 (518-668)||(33871922-33872066)
chr7 (507-680)||(19265782-19265948)
chr7 (518-669)||(22698978-22699127)
chr7 (518-681)||(48735121-48735278)
chr7 (518-680)||(27629612-27629769)
chr7 (518-680)||(42798647-42798804)
chr7 (518-679)||(11617589-11617745)
chr7 (518-660)||(34626228-34626364)
chr7 (507-661)||(13805069-13805217)
chr7 (592-680)||(27889316-27889402)
chr7 (507-661)||(28362164-28362313)
chr7 (518-642)||(46354172-46354293)
chr7 (546-680)||(7879644-7879773)
chr7 (507-665)||(3469190-3469347)
chr7 (518-679)||(29907395-29907552)
chr7 (546-667)||(18512466-18512581)
chr7 (518-669)||(35334827-35334971)
chr7 (518-679)||(16341256-16341413)
chr7 (526-679)||(18747472-18747621)
chr7 (518-680)||(19426890-19427046)
chr7 (507-681)||(23419673-23419842)
chr7 (518-669)||(47077866-47078010)
chr7 (593-668)||(45018935-45019012)
chr7 (523-680)||(32233135-32233286)
chr7 (571-660)||(38604558-38604641)
chr7 (520-660)||(28078152-28078286)
chr7 (518-669)||(14732832-14732979)
chr7 (518-659)||(19266428-19266564)
chr7 (518-668)||(42476851-42476994)
chr7 (518-591)||(42495919-42495992)
chr7 (593-669)||(21566485-21566560)
chr7 (599-655)||(33500569-33500625)
chr7 (617-680)||(13792150-13792213)
chr7 (595-681)||(23231609-23231693)
chr7 (595-680)||(31591109-31591192)
chr7 (518-591)||(18327012-18327085)
chr7 (571-680)||(35787269-35787372)
chr7 (518-582)||(7193063-7193127)
chr7 (507-655)||(7644923-7645066)
chr7 (519-679)||(11741774-11741927)
chr7 (507-662)||(48123502-48123652)
chr7 (518-681)||(6736868-6737023)
chr7 (531-669)||(38262207-38262340)
chr7 (546-660)||(35203445-35203556)
chr7 (617-650)||(1408529-1408562)
chr7 (518-633)||(5180202-5180314)
chr7 (637-680)||(25434112-25434155)
chr7 (629-668)||(42495874-42495913)
chr7 (518-584)||(7794597-7794663)
chr7 (518-591)||(44123705-44123778)
[»] chr2 (59 HSPs)
chr2 (507-680)||(10543664-10543835)
chr2 (518-681)||(14530296-14530456)
chr2 (518-680)||(24200623-24200782)
chr2 (513-680)||(5841001-5841165)
chr2 (518-680)||(8455316-8455473)
chr2 (518-680)||(9671158-9671314)
chr2 (518-649)||(12023950-12024075)
chr2 (518-680)||(25249738-25249894)
chr2 (518-680)||(17896237-17896395)
chr2 (520-680)||(21779261-21779414)
chr2 (518-680)||(21377074-21377230)
chr2 (531-668)||(14444720-14444851)
chr2 (531-680)||(10546153-10546298)
chr2 (518-668)||(7214512-7214659)
chr2 (518-680)||(25079717-25079875)
chr2 (518-680)||(17667980-17668137)
chr2 (518-681)||(23397744-23397900)
chr2 (518-681)||(14544041-14544202)
chr2 (518-669)||(11514414-11514559)
chr2 (518-649)||(22371035-22371158)
chr2 (556-680)||(36871509-36871626)
chr2 (507-677)||(4516354-4516519)
chr2 (518-680)||(17623542-17623699)
chr2 (507-680)||(44643489-44643658)
chr2 (518-660)||(99285-99420)
chr2 (607-669)||(23488545-23488607)
chr2 (518-660)||(31158459-31158598)
chr2 (507-681)||(17380237-17380404)
chr2 (595-680)||(40762234-40762317)
chr2 (518-618)||(29419945-29420046)
chr2 (518-643)||(5450263-5450384)
chr2 (518-669)||(24859999-24860143)
chr2 (525-669)||(25641487-25641625)
chr2 (619-679)||(40579750-40579810)
chr2 (529-668)||(19614981-19615116)
chr2 (507-661)||(32781307-32781456)
chr2 (518-677)||(45235820-45235975)
chr2 (518-680)||(27573599-27573755)
chr2 (518-661)||(33795263-33795401)
chr2 (620-666)||(34766330-34766376)
chr2 (595-680)||(15296406-15296490)
chr2 (600-681)||(19185742-19185823)
chr2 (520-668)||(19977726-19977869)
chr2 (595-667)||(24890463-24890533)
chr2 (518-680)||(39914306-39914463)
chr2 (595-656)||(44449407-44449467)
chr2 (518-591)||(44604832-44604905)
chr2 (625-681)||(8575975-8576031)
chr2 (620-680)||(34080176-34080236)
chr2 (619-678)||(41409936-41409995)
chr2 (626-680)||(3633708-3633762)
chr2 (595-680)||(25632561-25632644)
chr2 (619-660)||(24059016-24059057)
chr2 (518-582)||(17705473-17705537)
chr2 (632-680)||(22371199-22371247)
chr2 (617-669)||(26684631-26684683)
chr2 (632-669)||(124925-124962)
chr2 (518-642)||(23145736-23145855)
chr2 (518-642)||(23557526-23557645)
[»] chr3 (57 HSPs)
chr3 (519-680)||(13628790-13628948)
chr3 (518-680)||(26869707-26869863)
chr3 (518-680)||(29366720-29366879)
chr3 (518-660)||(46421055-46421194)
chr3 (518-660)||(8247707-8247846)
chr3 (518-680)||(13730602-13730761)
chr3 (507-679)||(22609755-22609921)
chr3 (518-680)||(40272812-40272969)
chr3 (518-680)||(34420643-34420801)
chr3 (519-680)||(5173719-5173876)
chr3 (518-681)||(39203516-39203672)
chr3 (518-680)||(16735441-16735597)
chr3 (518-679)||(22122918-22123072)
chr3 (507-678)||(26573116-26573282)
chr3 (526-680)||(516417-516569)
chr3 (546-681)||(10795422-10795554)
chr3 (518-680)||(1217090-1217245)
chr3 (595-681)||(45786213-45786299)
chr3 (518-680)||(53996565-53996723)
chr3 (518-670)||(6411832-6411978)
chr3 (518-680)||(25944469-25944627)
chr3 (518-660)||(9607203-9607342)
chr3 (595-680)||(54484765-54484848)
chr3 (595-678)||(353351-353434)
chr3 (554-669)||(14986993-14987105)
chr3 (518-609)||(10870021-10870108)
chr3 (520-661)||(30928166-30928302)
chr3 (595-680)||(34771364-34771447)
chr3 (529-679)||(45139479-45139624)
chr3 (518-680)||(52926219-52926367)
chr3 (547-680)||(31592878-31593004)
chr3 (595-680)||(49013473-49013558)
chr3 (518-669)||(7696903-7697042)
chr3 (595-680)||(15797294-15797377)
chr3 (529-660)||(33926094-33926220)
chr3 (597-680)||(25517170-25517251)
chr3 (518-680)||(12914035-12914192)
chr3 (571-649)||(47624095-47624167)
chr3 (600-669)||(829453-829521)
chr3 (595-660)||(54374365-54374429)
chr3 (507-669)||(45948849-45949009)
chr3 (617-680)||(24851301-24851364)
chr3 (507-616)||(45620890-45620997)
chr3 (599-681)||(55401254-55401335)
chr3 (620-680)||(30452892-30452952)
chr3 (616-676)||(44403559-44403619)
chr3 (521-667)||(7942993-7943134)
chr3 (625-680)||(10484616-10484671)
chr3 (525-659)||(12525414-12525543)
chr3 (518-591)||(53062038-53062112)
chr3 (518-630)||(4495714-4495821)
chr3 (616-680)||(40968611-40968675)
chr3 (632-680)||(47624208-47624256)
chr3 (595-660)||(9276338-9276400)
chr3 (617-659)||(46169988-46170030)
chr3 (507-584)||(35417905-35417982)
chr3 (627-680)||(45416934-45416986)
[»] chr5 (50 HSPs)
chr5 (518-680)||(38879559-38879718)
chr5 (518-680)||(43334180-43334339)
chr5 (518-660)||(27328730-27328869)
chr5 (518-680)||(41014297-41014453)
chr5 (518-680)||(4619104-4619263)
chr5 (518-680)||(24448868-24449025)
chr5 (527-680)||(32703411-32703557)
chr5 (518-680)||(8169984-8170139)
chr5 (507-680)||(19142943-19143110)
chr5 (518-680)||(35710291-35710446)
chr5 (600-681)||(12575659-12575739)
chr5 (549-681)||(13801766-13801895)
chr5 (507-669)||(43574564-43574730)
chr5 (571-681)||(7097759-7097863)
chr5 (507-669)||(39301090-39301247)
chr5 (518-666)||(2838756-2838899)
chr5 (609-669)||(25622524-25622584)
chr5 (617-680)||(16957386-16957449)
chr5 (518-669)||(208938-209084)
chr5 (595-680)||(29334447-29334531)
chr5 (607-679)||(12006329-12006401)
chr5 (595-679)||(20135656-20135740)
chr5 (515-583)||(22861758-22861826)
chr5 (518-660)||(22600432-22600569)
chr5 (595-681)||(34154813-34154897)
chr5 (555-669)||(7368413-7368520)
chr5 (607-660)||(10306494-10306546)
chr5 (595-680)||(12477120-12477204)
chr5 (616-677)||(21784335-21784396)
chr5 (518-583)||(37024646-37024711)
chr5 (518-681)||(1565409-1565567)
chr5 (620-680)||(3771414-3771474)
chr5 (595-669)||(16880658-16880730)
chr5 (518-660)||(28516453-28516591)
chr5 (507-584)||(23974747-23974824)
chr5 (616-680)||(19093884-19093948)
chr5 (621-681)||(30877563-30877623)
chr5 (621-680)||(16028624-16028683)
chr5 (595-680)||(11657699-11657783)
chr5 (617-658)||(21542489-21542530)
chr5 (620-669)||(39801591-39801640)
chr5 (624-680)||(10943845-10943900)
chr5 (525-632)||(22907913-22908014)
chr5 (629-680)||(32354211-32354262)
chr5 (616-674)||(4654421-4654479)
chr5 (518-584)||(22187263-22187329)
chr5 (629-678)||(13774949-13774998)
chr5 (513-542)||(28208240-28208269)
chr5 (607-676)||(39079755-39079823)
chr5 (595-669)||(42924841-42924917)
[»] chr6 (34 HSPs)
chr6 (523-680)||(29355855-29356009)
chr6 (518-680)||(12221914-12222074)
chr6 (518-668)||(9161101-9161247)
chr6 (518-680)||(1346942-1347097)
chr6 (518-680)||(1354757-1354912)
chr6 (518-680)||(2166410-2166569)
chr6 (518-680)||(2178043-2178202)
chr6 (599-680)||(12885967-12886048)
chr6 (600-680)||(12892064-12892144)
chr6 (507-677)||(13904984-13905147)
chr6 (595-681)||(7947370-7947455)
chr6 (518-669)||(3815088-3815234)
chr6 (607-669)||(3116140-3116202)
chr6 (618-680)||(6808468-6808530)
chr6 (620-681)||(10734904-10734965)
chr6 (619-680)||(23930127-23930188)
chr6 (518-642)||(6024211-6024332)
chr6 (617-680)||(13267797-13267860)
chr6 (595-680)||(26097210-26097293)
chr6 (620-681)||(11395836-11395896)
chr6 (518-658)||(14553490-14553626)
chr6 (617-660)||(24097649-24097692)
chr6 (595-650)||(24734694-24734749)
chr6 (518-584)||(8409221-8409287)
chr6 (607-669)||(14975101-14975163)
chr6 (518-584)||(14975171-14975237)
chr6 (518-678)||(15866041-15866194)
chr6 (595-680)||(25557775-25557858)
chr6 (515-584)||(12063442-12063511)
chr6 (518-681)||(12889404-12889563)
chr6 (617-660)||(32579497-32579540)
chr6 (518-568)||(33922935-33922985)
chr6 (601-681)||(383759-383837)
chr6 (595-636)||(2755466-2755507)
[»] chr8 (51 HSPs)
chr8 (518-681)||(13160680-13160837)
chr8 (518-680)||(39460994-39461153)
chr8 (518-669)||(21070708-21070859)
chr8 (518-669)||(20284080-20284230)
chr8 (518-669)||(12670261-12670405)
chr8 (518-680)||(28817626-28817783)
chr8 (518-680)||(35261657-35261814)
chr8 (518-668)||(36720774-36720919)
chr8 (518-679)||(45071243-45071398)
chr8 (518-669)||(7136538-7136686)
chr8 (507-678)||(44781506-44781674)
chr8 (518-661)||(24365078-24365217)
chr8 (518-680)||(30454097-30454252)
chr8 (518-680)||(6760800-6760959)
chr8 (520-669)||(18164771-18164914)
chr8 (518-681)||(17823554-17823712)
chr8 (507-669)||(29521696-29521854)
chr8 (518-680)||(26954110-26954270)
chr8 (518-669)||(44530127-44530273)
chr8 (558-680)||(20869941-20870060)
chr8 (518-657)||(20869523-20869653)
chr8 (546-680)||(5135290-5135418)
chr8 (518-668)||(2626497-2626645)
chr8 (518-680)||(25250500-25250659)
chr8 (507-679)||(42083699-42083867)
chr8 (518-660)||(24245429-24245564)
chr8 (595-678)||(29877146-29877227)
chr8 (518-680)||(12625867-12626025)
chr8 (518-591)||(28407394-28407467)
chr8 (595-667)||(17250888-17250960)
chr8 (518-660)||(8897784-8897921)
chr8 (599-669)||(16225075-16225145)
chr8 (600-669)||(16013511-16013580)
chr8 (624-680)||(40444845-40444901)
chr8 (595-669)||(5689683-5689755)
chr8 (617-680)||(26102589-26102652)
chr8 (617-680)||(28407475-28407538)
chr8 (522-669)||(31457155-31457296)
chr8 (620-669)||(27507985-27508034)
chr8 (595-636)||(43942376-43942417)
chr8 (595-669)||(8483949-8484021)
chr8 (523-650)||(11748282-11748406)
chr8 (617-680)||(35107311-35107374)
chr8 (526-639)||(23000260-23000365)
chr8 (595-669)||(44742529-44742602)
chr8 (595-667)||(19729392-19729462)
chr8 (631-680)||(27468092-27468141)
chr8 (595-669)||(26457781-26457851)
chr8 (507-645)||(14018003-14018137)
chr8 (613-666)||(18595906-18595959)
chr8 (519-584)||(30962864-30962929)
[»] chr4 (77 HSPs)
chr4 (518-680)||(5648237-5648393)
chr4 (518-679)||(6430627-6430782)
chr4 (518-681)||(44363129-44363289)
chr4 (518-660)||(16911540-16911679)
chr4 (507-680)||(54175031-54175200)
chr4 (518-670)||(54730227-54730377)
chr4 (518-680)||(16408601-16408760)
chr4 (518-680)||(30639358-30639514)
chr4 (518-680)||(30352580-30352748)
chr4 (518-669)||(40915807-40915952)
chr4 (518-680)||(20224962-20225117)
chr4 (518-680)||(47528530-47528685)
chr4 (518-680)||(48598825-48598980)
chr4 (518-650)||(5306694-5306820)
chr4 (518-680)||(23501771-23501924)
chr4 (518-680)||(11054148-11054303)
chr4 (612-680)||(47482850-47482918)
chr4 (557-680)||(20639658-20639777)
chr4 (518-669)||(21646942-21647090)
chr4 (518-680)||(35567148-35567305)
chr4 (595-681)||(20225126-20225212)
chr4 (507-677)||(25343154-25343321)
chr4 (532-678)||(29207900-29208039)
chr4 (520-660)||(17043414-17043549)
chr4 (510-669)||(19027818-19027972)
chr4 (517-680)||(9832313-9832469)
chr4 (507-669)||(47441541-47441698)
chr4 (518-680)||(23580208-23580365)
chr4 (518-681)||(30690175-30690340)
chr4 (595-680)||(20908636-20908720)
chr4 (607-680)||(33836487-33836560)
chr4 (514-661)||(32478810-32478946)
chr4 (618-681)||(38755907-38755970)
chr4 (558-679)||(7909281-7909397)
chr4 (526-661)||(25463108-25463238)
chr4 (595-680)||(51865038-51865121)
chr4 (518-680)||(13256399-13256554)
chr4 (617-681)||(11394924-11394988)
chr4 (617-681)||(11404651-11404715)
chr4 (519-670)||(30496332-30496476)
chr4 (546-680)||(47443963-47444092)
chr4 (519-660)||(49938613-49938746)
chr4 (595-680)||(25629101-25629184)
chr4 (619-681)||(40553936-40553998)
chr4 (619-680)||(32484307-32484368)
chr4 (595-659)||(49796849-49796911)
chr4 (518-666)||(20405071-20405210)
chr4 (599-667)||(21489143-21489210)
chr4 (521-669)||(39077807-39077948)
chr4 (523-667)||(41018807-41018945)
chr4 (507-591)||(42164232-42164316)
chr4 (617-660)||(14983906-14983949)
chr4 (618-681)||(25388249-25388312)
chr4 (597-680)||(36816384-36816466)
chr4 (617-680)||(38786681-38786744)
chr4 (518-584)||(14590815-14590881)
chr4 (618-680)||(50555656-50555718)
chr4 (518-678)||(487128-487292)
chr4 (518-591)||(17315382-17315455)
chr4 (616-677)||(36589815-36589876)
chr4 (518-666)||(37494829-37494972)
chr4 (523-657)||(7385499-7385628)
chr4 (598-669)||(16494272-16494343)
chr4 (507-660)||(30581485-30581635)
chr4 (507-677)||(54966988-54967151)
chr4 (518-680)||(55766466-55766623)
chr4 (525-656)||(32629293-32629418)
chr4 (630-680)||(35532077-35532127)
chr4 (518-660)||(39029080-39029218)
chr4 (619-681)||(44718641-44718703)
chr4 (620-680)||(19027986-19028046)
chr4 (595-679)||(8473621-8473705)
chr4 (617-676)||(28494223-28494282)
chr4 (595-676)||(9987838-9987917)
chr4 (599-660)||(2813181-2813242)
chr4 (600-649)||(35894492-35894540)
chr4 (507-584)||(54640430-54640507)
[»] chr1 (67 HSPs)
chr1 (518-680)||(30395726-30395885)
chr1 (513-666)||(27201643-27201793)
chr1 (518-680)||(18944644-18944804)
chr1 (507-661)||(11596503-11596651)
chr1 (518-680)||(46247953-46248110)
chr1 (518-680)||(34725098-34725253)
chr1 (518-669)||(27474282-27474427)
chr1 (518-680)||(35117765-35117925)
chr1 (518-680)||(20004090-20004249)
chr1 (518-668)||(32632569-32632713)
chr1 (518-680)||(38478282-38478437)
chr1 (531-680)||(10668239-10668385)
chr1 (518-669)||(46991805-46991951)
chr1 (507-677)||(18724549-18724713)
chr1 (533-680)||(35005139-35005283)
chr1 (518-668)||(47214512-47214655)
chr1 (518-669)||(14617039-14617185)
chr1 (518-676)||(6925101-6925254)
chr1 (518-669)||(18741968-18742118)
chr1 (518-680)||(19414440-19414595)
chr1 (507-680)||(6983811-6983977)
chr1 (518-666)||(23768334-23768477)
chr1 (595-681)||(4349713-4349797)
chr1 (519-669)||(9939463-9939611)
chr1 (507-669)||(45812548-45812704)
chr1 (507-669)||(2435797-2435955)
chr1 (531-669)||(35253198-35253329)
chr1 (595-669)||(42304218-42304292)
chr1 (518-669)||(45402096-45402243)
chr1 (607-680)||(50606488-50606561)
chr1 (595-650)||(19932783-19932838)
chr1 (507-680)||(20036210-20036378)
chr1 (518-656)||(41319830-41319963)
chr1 (507-678)||(15511150-15511319)
chr1 (518-668)||(19701571-19701717)
chr1 (549-678)||(22324925-22325049)
chr1 (518-680)||(12126837-12126992)
chr1 (595-669)||(31442400-31442473)
chr1 (520-680)||(8197046-8197201)
chr1 (518-666)||(17470361-17470503)
chr1 (518-658)||(25468285-25468420)
chr1 (595-677)||(10378738-10378818)
chr1 (518-645)||(22930104-22930224)
chr1 (507-680)||(50811929-50812098)
chr1 (599-676)||(15505643-15505717)
chr1 (558-660)||(31382234-31382330)
chr1 (518-650)||(25290164-25290300)
chr1 (518-631)||(33222985-33223093)
chr1 (518-661)||(44485128-44485266)
chr1 (617-680)||(30555210-30555273)
chr1 (595-680)||(1517311-1517394)
chr1 (595-680)||(20999850-20999933)
chr1 (595-680)||(23796540-23796623)
chr1 (595-680)||(43768214-43768297)
chr1 (617-669)||(4587574-4587626)
chr1 (519-676)||(22327101-22327250)
chr1 (617-661)||(30682907-30682951)
chr1 (620-680)||(33594131-33594191)
chr1 (595-677)||(39214961-39215042)
chr1 (607-668)||(45264411-45264471)
chr1 (507-616)||(50760288-50760394)
chr1 (598-650)||(6358199-6358250)
chr1 (507-594)||(25554803-25554890)
chr1 (518-561)||(40424743-40424786)
chr1 (518-584)||(2435984-2436050)
chr1 (626-680)||(25554742-25554796)
chr1 (595-676)||(35019305-35019383)
[»] scaffold0168 (1 HSPs)
scaffold0168 (518-680)||(30557-30712)
[»] scaffold0049 (1 HSPs)
scaffold0049 (526-681)||(58963-59115)
[»] scaffold0258 (1 HSPs)
scaffold0258 (518-680)||(13024-13180)
[»] scaffold0057 (4 HSPs)
scaffold0057 (518-680)||(46809-46966)
scaffold0057 (518-666)||(24786-24924)
scaffold0057 (616-660)||(46727-46771)
scaffold0057 (595-680)||(43709-43793)
[»] scaffold0311 (1 HSPs)
scaffold0311 (518-667)||(10788-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (518-650)||(10080-10205)
scaffold0187 (518-650)||(20408-20533)
[»] scaffold1176 (1 HSPs)
scaffold1176 (518-668)||(1599-1742)
[»] scaffold0254 (1 HSPs)
scaffold0254 (518-643)||(4135-4258)
[»] scaffold0015 (1 HSPs)
scaffold0015 (595-680)||(48634-48717)
[»] scaffold0223 (1 HSPs)
scaffold0223 (518-681)||(11110-11265)
[»] scaffold0180 (1 HSPs)
scaffold0180 (595-669)||(24144-24216)
[»] scaffold0018 (1 HSPs)
scaffold0018 (546-668)||(72879-72997)
[»] scaffold0954 (1 HSPs)
scaffold0954 (595-681)||(3596-3680)
[»] scaffold0005 (1 HSPs)
scaffold0005 (518-584)||(226497-226563)
[»] scaffold0036 (1 HSPs)
scaffold0036 (526-649)||(35048-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (518-587)||(43107-43176)
[»] scaffold0024 (1 HSPs)
scaffold0024 (518-559)||(83853-83894)


Alignment Details
Target: chr7 (Bit Score: 681; Significance: 0; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 681; E-Value: 0
Query Start/End: Original strand, 10 - 730
Target Start/End: Original strand, 39123360 - 39124081
Alignment:
Q  10 aacctgtgtcttgcttgtcaatgcccaatcacgttgatagtaagtagtaacagtcatagggagagtagtagtgagacatggccatcattttattcaattt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123360 aacctgtgtcttgcttgtcaatgcccaatcacgttgatagtaagtagtaacagtcatagggagagtagtagtgagacatggccatcattttattcaattt 39123459  T
Q  110 gacttggtttaatatcttacaaaagaaaaaagcagggtcaaatcagttcctttggatttataagggagaagaatgaaactgtttaaatatgctactcatt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123460 gacttggtttaatatcttacaaaagaaaaaagcagggtcaaatcagttcctttggatttataagggagaagaatgaaactgtttaaatatgctactcatt 39123559  T
Q  210 ttaaggcgtgtaactctgtgttcacttcacatattaatgtgataattatatgtaaaactgtgaagaatttttggaaagttttttatatatacattgtttg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123560 ttaaggcgtgtaactctgtgttcacttcacatattaatgtgataattatatgtaaaactgtgaagaatttttggaaagttttttatatatacattgtttg 39123659  T
Q  310 gagtctgctgcatgtttaacattagacggagctttctttctaattgtgctttagattctgaaaaggaactcaatactccgattatgcannnnnnnatctt 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  39123660 gagtctgctgcatgtttaacattagacggagctttctttctaattgtgctttagattctgaaaaggaactcaatactccgattatgcatttttttatctt 39123759  T
Q  410 ccacttttccatcttcgtaattctaaaatcaaagtttacatatttattcttcctgcatactagatattatatcttttaacaagagatcatttgtgggtgg 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123760 ccacttttccatcttcgtaattctaaaatcaaagtttacatatttattcttcctgcatactagatattatatcttttaacaagagatcatttgtgggtgg 39123859  T
Q  510 cgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 609  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123860 cgcaatggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 39123959  T
Q  610 acaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc-tttaggcccatgtggtgttgtgtatttatgc 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  39123960 acaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaagctgcccttttaggcccatgtggtgttgtgtatttatgc 39124059  T
Q  709 tcttgaagagttaacagtatat 730  Q
    ||||||||||||||||||||||    
T  39124060 tcttgaagagttaacagtatat 39124081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 40463855 - 40464011
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||| ||||||| ||||||||||||||||| ||||    ||||||||||| ||||||||  |    
T  40463855 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggt----aaggctgcgtataatacacc--a 40463948  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||||||||    
T  40463949 aatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgcccttt 40464011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 519 - 681
Target Start/End: Original strand, 47716438 - 47716597
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||| |||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 47716533  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||||||| | |||||||||    
T  47716534 aatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttta 47716597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 42805502 - 42805661
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||    
T  42805502 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaa 42805597  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  42805598 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 42805661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 21172164 - 21172009
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  21172164 taaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 21172070  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  21172069 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 21172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 681
Target Start/End: Complemental strand, 10693228 - 10693072
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||| |||||||||||    
T  10693228 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag-agggta----aggctgcgtacaatacaccaaa 10693134  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||| | | |||||||||    
T  10693133 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttta 10693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 43557450 - 43557610
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  43557450 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaa 43557545  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgcccttt 680  Q
     |||||||||||||| |||||||| ||||||||| |||||| ||| |||||||| | ||||||||    
T  43557546 taatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgcccttt 43557610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 32758239 - 32758394
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||| ||| |||||||||||    
T  32758239 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgtgtacaatacaccaaa 32758333  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  32758334 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 32758394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 522 - 680
Target Start/End: Complemental strand, 42391251 - 42391100
Alignment:
Q  522 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 621  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||  ||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tg 42391159  T
Q  622 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  42391158 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 42391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 2541177 - 2541030
Alignment:
Q  518 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacacca 615  Q
    |||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  ||||||||    
T  2541177 taaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtactatacacca 2541082  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||  ||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  2541081 aa--tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 2541030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 33872066 - 33871922
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||||||||||||||| |    ||||||||||| ||||||||  |    
T  33872066 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggat----aaggctgcgtacaatacacc--a 33871973  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    ||||||||||||||||||| ||||||| ||||| | ||||||| |||||||    
T  33871972 aatggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacc 33871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 19265782 - 19265948
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||| | || || | | |||||||||||| |||||    |||||||||||     
T  19265782 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggt----aaggctgcgtac 19265877  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||  ||||||||||||||||||||||| ||| | |||| ||||||||| |||||||| ||||||||||    
T  19265878 aatacacc--aaatggtgggaccccttcccgga-cctacatatgtgggagctttagtgcaccgggctgcccttt 19265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 22699127 - 22698978
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| |  | |||| |||||||| ||||  |||||||||||| ||||||||||    ||| ||||||| ||||||||||    
T  22699127 taaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggt----aagactgcgtacaatacaccaa 22699032  T
Q  617 aaatggtgggaccc-cttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||  ||||||||||||| ||||| ||||||| | ||||||||    
T  22699031 aaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccg 22698978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 518 - 681
Target Start/End: Complemental strand, 48735278 - 48735121
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| | ||||   ||||||||||||| || ||||    |||||||||| ||||||||||    
T  48735278 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa-cacggta----aggctgcgtacaatacaccaa 48735184  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  48735183 a--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttta 48735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 27629612 - 27629769
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||| |||| |||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||| |||||||||||||||      
T  27629612 taaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggttgcgtaaaatacacc-- 27629705  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||| |||||| |||| || |||||  |||||||| | ||||||||    
T  27629706 aaatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgcccttt 27629769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 42798647 - 42798804
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||||||| || ||||    |||||||||| ||||||||||    
T  42798647 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaa 42798742  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||| |||||||||||||| |||| ||||||| | ||||| || | ||||||||    
T  42798743 a--tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgcccttt 42798804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 679
Target Start/End: Complemental strand, 11617745 - 11617589
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    || ||||||| ||||||||||    
T  11617745 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 11617650  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |  |||||||||||||||| ||||||||||||||  ||| |||| |||||||| | |||||||    
T  11617649 a--tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 34626364 - 34626228
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||| ||||| | ||| | | |||||||| ||||| | ||| |||||||||||||||||    |||||||||  |||||||||||    
T  34626364 taaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggta----aggctgcgttcaatacaccaaa 34626269  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
      |||||||| |||||||||||||||||||||| |||||||||    
T  34626268 --tggtgggatcccttcccggaccctgcgtatgcgggagcttt 34626228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 507 - 661
Target Start/End: Original strand, 13805069 - 13805217
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||||| ||||||||||||||||||||||||| |  |||||| |||||||| ||||  | |||| |||| ||||||||   || ||||||| |||     
T  13805069 tggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgt-aaaacagg---ggtaaggctgtgtac 13805164  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  13805165 aatacacc--aaatggtgggaccacttcctggaccctgcgtatgcgggagctttg 13805217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 592 - 680
Target Start/End: Complemental strand, 27889402 - 27889316
Alignment:
Q  592 gggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||    
T  27889402 gggaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgcccttt 27889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 507 - 661
Target Start/End: Complemental strand, 28362313 - 28362164
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||| | |||||||||||||||||| |||||| | ||| ||| |||||||||||||| | ||||||||||||||     | || |||||||||||     
T  28362313 tggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaa---acttggtaaggctgcgtac 28362217  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||||||||  |||||||||||||||||||| |||| ||| |||| ||||||||||    
T  28362216 aatacacc--aaatggtgggaccccttcccagaccttgcatatgtgggagctttg 28362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 642
Target Start/End: Original strand, 46354172 - 46354293
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||| || || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  46354172 taaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 46354267  T
Q  617 aaatggtgggaccccttcccggaccc 642  Q
     |||||||||||||||||||||||||    
T  46354268 taatggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 546 - 680
Target Start/End: Original strand, 7879644 - 7879773
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 644  Q
    ||||||| |||||||| |||||  ||||||||||||||| || ||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  7879644 cacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 7879737  T
Q  645 cgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||| ||||||||  |||||||| | ||||||||    
T  7879738 cgtatgcgggagcttcagtgcaccgggttgcccttt 7879773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 507 - 665
Target Start/End: Complemental strand, 3469347 - 3469190
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa---cagggtagggaaggctgcg 603  Q
    |||||||| | ||||||||||||||||||||||||| | ||| |   ||||||||||||||  |||||||||||||||   ||||||| ||     ||||    
T  3469347 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggt----tgcg 3469252  T
Q  604 taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgc 665  Q
    || |||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||| ||||    
T  3469251 tacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgc 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 679
Target Start/End: Original strand, 29907395 - 29907552
Alignment:
Q  518 taaagttgttgt--catgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||  ||||||||||||| | ||||||| |||||||||||||| | |||||||||||||| |  ||  | ||||||||||  ||||||||     
T  29907395 taaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-atagt--gtaaggctgcgttcaatacacc- 29907490  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||||||||| |||||||||||  ||||| ||||||||| |||||||| | |||||||    
T  29907491 aaaatggtgggaccccatcccggaccct--gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 546 - 667
Target Start/End: Complemental strand, 18512581 - 18512466
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 645  Q
    ||||||| |||||||| |||||    ||||||||||||| ||||||    |||||||||| |||||||| ||  ||||||||||||||||||||||||||    
T  18512581 cacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggta----aggctgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgc 18512488  T
Q  646 gtatgagggagctttggtgcac 667  Q
    ||||| ||||||||||||||||    
T  18512487 gtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 35334971 - 35334827
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | |||| || |||||||| ||||| ||||| |||  ||||||||||||    || ||| ||| |||||||| ||    
T  35334971 taaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgta-aaaaacagggta----agactgtgtacaatacaccgaa 35334877  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
      |||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  35334876 --tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccg 35334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 679
Target Start/End: Original strand, 16341256 - 16341413
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||| ||||||   ||||| | ||||||| ||||| |||||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||    
T  16341256 taaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta----aggctacgtacaatacaccaa 16341351  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    || ||||||| || |||||||||||   | |||| |||||||||||||||||| |||||||||    
T  16341352 aa-tggtgggccctcttcccggacctatcatatgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 679
Target Start/End: Original strand, 18747472 - 18747621
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggt 623  Q
    |||||| |||||||||| | ||||||  |||||| | ||||| | || |||||||||||  ||||||    ||||||||||| ||||||||  || ||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggt----aaggctgcgtataatacacc--aattggt 18747565  T
Q  624 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||| |||||||||    
T  18747566 gggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 19427046 - 19426890
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||| |||| |||||    ||| ||||||| ||||||||      
T  19427046 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggt----aagactgcgtacaatacacc-- 19426953  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||| |||||||||| |||| | ||||||  |||||||| | ||||||||    
T  19426952 aaatggtggga-cccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgcccttt 19426890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 507 - 681
Target Start/End: Complemental strand, 23419842 - 23419673
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||| |||||||||||| ||| | ||| ||| ||||| || ||||| | |||||||||| ||||||||||    ||| |||||||    
T  23419842 tggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggt----aagactgcgta 23419747  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
     ||||||||  |||||||||||||||||||  |||| ||||| || ||| ||||| ||||| || |||||||||||    
T  23419746 caatacacc--aaatggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttta 23419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 47078010 - 47077866
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||| |||| || ||    || | |||||| |||||||  ||    
T  47078010 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaatagagt----aaagttgcgtacaatacac--aa 47077918  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||||||||  ||||| | |||| ||||||| | ||||||||    
T  47077917 aatggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccg 47077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 593 - 668
Target Start/End: Complemental strand, 45019012 - 45018935
Alignment:
Q  593 ggaaggctgcgtaaaatacaccaaaaa--tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    ||||||||||||| |||| ||||||||  |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  45019012 ggaaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 523 - 680
Target Start/End: Complemental strand, 32233286 - 32233135
Alignment:
Q  523 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 622  Q
    |||||||||  ||||||||| | || |||| |||||||| |||||   |||||||||||||||||||||    |||| ||||| | |||||||||  |||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggcagcgtatattacaccaaa--tgg 32233193  T
Q  623 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||  |||||||  ||||||| |||||||||||||  |||||||| ||||||||||    
T  32233192 tgggattccttcccaaaccctgcatatgagggagcttcagtgcaccgggctgcccttt 32233135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 660
Target Start/End: Original strand, 38604558 - 38604641
Alignment:
Q  571 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||| |||||||| |||||||||||||||| |||||||||    
T  38604558 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgagacccctttccggaccctgcgtatgcgggagcttt 38604641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 660
Target Start/End: Complemental strand, 28078286 - 28078152
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 619  Q
    |||||||||||||||||||| || | ||||||| |||||||||||||| ||||| |||  |||||||||||    |||| ||| |  ||||||||  |||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggt----aaggttgcatgcaatacacc--aaa 28078193  T
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||| | ||||| |||| | |||||||    
T  28078192 tggtgggaccccttcccgaatcctgcatatgcgagagcttt 28078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 14732979 - 14732832
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||   |||||||| |||||||    ||||||||| || ||||||||    
T  14732979 taaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggta----aggctgcgtcaa-tacaccaa 14732885  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||  || |||||||| ||||||  |||| ||||||||| ||||||||    
T  14732884 aaatggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccg 14732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 659
Target Start/End: Original strand, 19266428 - 19266564
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | |  |||| ||||||||  |||  | | |||| ||||||| |||||||    |||||||||| ||||||||||    
T  19266428 taaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggta----aggctgcgtacaatacaccaa 19266523  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 659  Q
    |  | |||||| |||||||||||||||||||||| ||||||||    
T  19266524 a--ttgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 42476851 - 42476994
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||| ||| | ||||| | ||||| || ||||| ||||||||||||||| || ||||    |||||||||| |||||||||||    
T  42476851 taaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa-caaggta----aggctgcgtacaatacaccaaa 42476945  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
      ||||||||||||||||  | | |||| |||| ||||||| | |||||||    
T  42476946 --tggtgggaccccttcctaggctctgcatatgcgggagctctagtgcacc 42476994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 42495992 - 42495919
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||| |||||||||||||    
T  42495992 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggta 42495919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 593 - 669
Target Start/End: Original strand, 21566485 - 21566560
Alignment:
Q  593 ggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||| ||||||| |||||||||||| |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  21566485 ggaagactgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccg 21566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 655
Target Start/End: Original strand, 33500569 - 33500625
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 655  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcggga 33500625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Complemental strand, 13792213 - 13792150
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||| ||||||||||| || ||||||||||||  |||||||| |||||||||||||||||||    
T  13792213 aaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgcccttt 13792150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 23231609 - 23231693
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | |||||||    
T  23231609 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttta 23231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 31591192 - 31591109
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||| ||| |||| ||||||| | |||||||| | ||||||||    
T  31591192 aaggctgcgtacaataca--ataaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgcccttt 31591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 18327012 - 18327085
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    |||||||||||||||||||||  || | ||||||| |||||||  ||||| | |||||||||||||||||||||    
T  18327012 taaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggta 18327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 680
Target Start/End: Complemental strand, 35787372 - 35787269
Alignment:
Q  571 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 670  Q
    |||||||||||||||| ||||    ||| |||||| |||||||||||  ||| |||||||||||||||||| |||||||| ||||||||   |||||||     
T  35787372 ctcttgtgtaaaaacatggta----aggttgcgtacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T
Q  671 gctgcccttt 680  Q
    | ||||||||    
T  35787278 gttgcccttt 35787269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 7193063 - 7193127
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 582  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||    
T  7193063 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 655
Target Start/End: Original strand, 7644923 - 7645066
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 605  Q
    ||||||| || |||| ||||||| | |||||||||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||   |||||    
T  7644923 tggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aagatagcgta 7645018  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 655  Q
     |||||||| ||||| |||||||||||| || ||||||||||||| ||||    
T  7645019 caatacacc-aaaattgtgggacccctt-cctgaccctgcgtatgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 679
Target Start/End: Original strand, 11741774 - 11741927
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    |||||||||||||||||||||||| | || |||| ||||||||  |||| |  ||| ||||||||  ||||||    |||||||||| |||||||||||     
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaat-agggta----aggctgcgtacaatacaccaaa- 11741867  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
     |||||||| |||||||||||  ||||  ||| ||||||| | |||||||| | |||||||    
T  11741868 -tggtgggatcccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 662
Target Start/End: Complemental strand, 48123652 - 48123502
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||| ||||||| |||||| | || |||| |||||||| ||||| | |||||||||||| ||||||||    ||  |||| ||    
T  48123652 tggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggt----aaaactgcata 48123557  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttgg 662  Q
     ||||||||  ||||||||||||||||| | ||||| ||| |||| ||||| |||||    
T  48123556 caatacacc--aaatggtgggacccctttctggaccatgcatatgcgggaggtttgg 48123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 6736868 - 6737023
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||| |||||||| | ||||||| ||||||||  ||||   ||||||| ||||||||    ||| ||| |||| || ||||||||  |    
T  6736868 taaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaaca----aggtaagactgcatacaatacacc--a 6736961  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||| ||| || |||||||||| |||||| || ||| |||| |||||||| |||||||||||    
T  6736962 aatggt-ggagcctttcccggaccttgcgtacgaaggaccttt-gtgcaccgggctgcccttta 6737023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 531 - 669
Target Start/End: Complemental strand, 38262340 - 38262207
Alignment:
Q  531 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtgggacc 629  Q
    ||||||||| || | ||||||| |||||||| ||||| ||||||||||||||||     || || || | ||| || |||||||||||  || |||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaa----tatggtaatgttgcatacaatacaccaaa--tgatgggacc 38262247  T
Q  630 ccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||| || ||||||||| ||||||||| ||||||||    
T  38262246 ccttcccgaacactgcgtatgcgggagctttagtgcaccg 38262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 660
Target Start/End: Original strand, 35203445 - 35203556
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 644  Q
    ||||||| |||||||| |||||  ||||||||||||||| |||| ||    || ||||||| |||| |||||||||||||||| ||||||| | || ||     
T  35203445 cacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggata----agactgcgtacaatataccaaaaatggtgggatcccttcctgaactcta 35203540  T
Q  645 cgtatgagggagcttt 660  Q
    |||||| |||||||||    
T  35203541 cgtatgcgggagcttt 35203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 1408529 - 1408562
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatg 650  Q
    ||||||||||||||||||||||||||||||||||    
T  1408529 aaatggtgggaccccttcccggaccctgcgtatg 1408562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 633
Target Start/End: Complemental strand, 5180314 - 5180202
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || |||| ||| | || ||||| | ||||||||| |||||||||||    ||| ||| ||| || |||||||    
T  5180314 taaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggt----aagactgtgtacaacacaccaa 5180219  T
Q  617 aaatggtgggacccctt 633  Q
    ||||| | |||||||||    
T  5180218 aaatgattggacccctt 5180202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 680
Target Start/End: Original strand, 25434112 - 25434155
Alignment:
Q  637 ggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  25434112 ggaccctgcgtatgcgggagctttagtgcaccgagctgtccttt 25434155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  629 cccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 7794663 - 7794597
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||||||| ||||||||| || | ||||||| |||||||| ||||| | ||||| ||||||||    
T  7794663 taaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaa 7794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 44123778 - 44123705
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    |||||||| ||||||||||||||||    |||||| ||||| || ||||| | |||||||||||||||| ||||    
T  44123778 taaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaacaaggta 44123705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 7e-51; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 10543664 - 10543835
Alignment:
Q  507 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgt 604  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||||||||| |||||||    |||||||||    
T  10543664 tggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggta----aggctgcgt 10543759  T
Q  605 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  10543760 acaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 14530296 - 14530456
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    ||||| |||| ||||||||||    
T  14530296 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctacgtacaatacaccaa 14530391  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  14530392 taatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 14530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 24200782 - 24200623
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  24200782 taaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 24200687  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||||||| ||||| | ||||||| |||||||| | ||||||||    
T  24200686 aaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgcccttt 24200623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 513 - 680
Target Start/End: Original strand, 5841001 - 5841165
Alignment:
Q  513 aatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatac 611  Q
    ||||||||||||||||||||||||||| || | ||||||| |||||||||||||| | || |||||||||||     ||||| |||| |||||| |||||    
T  5841001 aatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaa----tagggtaaggatgcgtacaatac 5841096  T
Q  612 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | ||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  5841097 atcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 5841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 8455473 - 8455316
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||    
T  8455473 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggta----aggctgcgtacaatacaccaa 8455378  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||    
T  8455377 a--tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgcccttt 8455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 9671158 - 9671314
Alignment:
Q  518 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| ||| | ||||||| ||| |||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||    
T  9671158 taaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaa 9671252  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  9671253 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 9671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 649
Target Start/End: Complemental strand, 12024075 - 12023950
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  12024075 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 12023982  T
Q  618 aatggtgggaccccttcccggaccctgcgtat 649  Q
    |||||||||||||| |||||||||||||||||    
T  12023981 aatggtgggaccccctcccggaccctgcgtat 12023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 25249894 - 25249738
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||| |||||||||    ||||||||||| ||||||||  |    
T  25249894 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggt----aaggctgcgtacaatacacc--a 25249801  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||| ||||||||| |||||||||||| | ||||||| |||||||| | ||||||||    
T  25249800 aatggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgcccttt 25249738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 17896237 - 17896395
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||| |||| | ||||| | ||||||||||||||   |||||||||||||| |   ||||| ||||||||||| |||| |||||    
T  17896237 taaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaa---tagggtaaggctgcgtacaatataccaa 17896333  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||| ||||||||||||||| ||||||||| ||||| |||| ||||||||    
T  17896334 a--tggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgcccttt 17896395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 520 - 680
Target Start/End: Complemental strand, 21779414 - 21779261
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 619  Q
    ||||||||||||||||||||||| | ||||||| |||||||| || || | ||||||||||||| |||||||    ||| |||||| |||||||||||      
T  21779414 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa-- 21779322  T
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  21779321 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 21779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 21377230 - 21377074
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| |  ||| || |||||| |||||||   |||||||||||||| |||||||    |||||| ||| ||| ||||||    
T  21377230 taaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggta----aggctgggtacaatgcaccaa 21377135  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  21377134 a--tggtgggaccccttcccgaaccctgcgtatgtgggagcttt-gtgcaccgagctgcccttt 21377074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 668
Target Start/End: Original strand, 14444720 - 14444851
Alignment:
Q  531 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 630  Q
    ||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    |||||| |||  ||||||||||  |||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggctgtgtacgatacaccaaa--tggtgggaccc 14444813  T
Q  631 cttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  14444814 cttcccggaccctgcgtatgcgggagctttagtgcacc 14444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 531 - 680
Target Start/End: Original strand, 10546153 - 10546298
Alignment:
Q  531 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 628  Q
    |||||||||||| | ||||||| |||||||| |||||   ||||||| ||||||  |||||||    |||||||||| |||||||||||  |||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggac 10546246  T
Q  629 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  10546247 cccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 7214512 - 7214659
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || |||| |||||| | ||||| ||||||||||||||| |||||||    ||||||||||| ||||||| ||    
T  7214512 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggt----aaggctgcgtacaatacacaaa 7214607  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||| || |||||| ||||| ||||||||| | ||| ||| |||||||    
T  7214608 aaatggtgagatcccttctcggacactgcgtatgcgagagttttagtgcacc 7214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 25079875 - 25079717
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||| |||||||   |||||||||||||| |    ||| |||| |||||| |||||||| ||    
T  25079875 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaaca--aggtaaggatgcgtacaatacaccgaa 25079778  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25079777 --tggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 17667980 - 17668137
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||    |||||||||||||| |||||||    |||||||||| ||||||||||    
T  17667980 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggta----aggctgcgtacaatacaccaa 17668075  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||| |||||||| || |||||||||||  ||||||||| |||||||| | ||||||||    
T  17668076 a--tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgcccttt 17668137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 23397744 - 23397900
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||  ||||||    ||||| |||| |||||||||||    
T  23397744 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctacgtacaatacaccaaa 23397838  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
      ||||||||||||||| |||||||| | |||| ||||||| | |||||||| | |||||||||    
T  23397839 --tggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttta 23397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 14544041 - 14544202
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||||||||||||||| |  || |||||| || || ||||| | ||||||||||  |||||||||||    || ||||||  ||||  | |    
T  14544041 taaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggta----agactgcgtgcaataaccaa 14544136  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||| ||||||| || |||||||||    
T  14544137 aaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttta 14544202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 11514414 - 11514559
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| ||| |||| ||||| | |||||||||||||| ||  |||    |||||||||| ||||||||||    
T  11514414 taaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagta----aggctgcgtacaatacaccaa 11514509  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |  ||||||||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  11514510 a--tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccg 11514559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 649
Target Start/End: Original strand, 22371035 - 22371158
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||  | | ||||||| |||||||| ||||| | |||  ||||||||||||||||    |||||||||| |||||||||||    
T  22371035 taaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggta----aggctgcgtacaatacaccaaa 22371128  T
Q  618 aatggtgggaccccttcccggaccctgcgtat 649  Q
      ||||||||||||||||||||||||| ||||    
T  22371129 --tggtgggaccccttcccggaccctgtgtat 22371158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 556 - 680
Target Start/End: Original strand, 36871509 - 36871626
Alignment:
Q  556 agtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 655  Q
    |||||| ||||| | ||||||||| |||||||||||    |||||||||| |||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccgga-cctgcgtatgcggga 36871601  T
Q  656 gctttggtgcaccgagctgcccttt 680  Q
    ||||| |||||||| | ||||||||    
T  36871602 gctttagtgcaccgggttgcccttt 36871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 507 - 677
Target Start/End: Complemental strand, 4516519 - 4516354
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||||||| |||||||||| | |||   | ||||| |||||||| | |||||||||||||| ||||| |    | ||||||||    
T  4516519 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggca----acgctgcgta 4516424  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
     ||||||||||   ||||||||||||||||||||||||||||||| || |||||| ||| |||| |||||||    
T  4516423 caatacaccaat--tggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtaccgggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 17623542 - 17623699
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||| ||||| || | ||||||| |||||||| |||||   |||||||||||||| ||||||    ||||||||||| ||||||||      
T  17623542 taaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggt----aaggctgcgtacaatacacc-- 17623635  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| ||||||||||| | |||||||||| || |||||| |||||| | | ||||||||    
T  17623636 aaatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgcccttt 17623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 44643489 - 44643658
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 604  Q
    |||||||||| |||||||||  |||||||||||||| | |||| || ||||| |||||||  | |||||  |||||||  ||| |||    |||||||||    
T  44643489 tggcgcaatggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagta----aggctgcgt 44643584  T
Q  605 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | |||  ||||||  ||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||    
T  44643585 acaatgtaccaaa--tggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgcccttt 44643658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 99420 - 99285
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||| |||||||||| | ||||||| |||||||||||||| | |||||||  |||||||     || ||||||||||| ||||||||  |    
T  99420 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaaca----tggcaaggctgcgtacaatacacc--a 99328  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||| |||||||| | ||||||| ||||| |||||||||    
T  99327 aatggtggaaccccttctcagaccctgtgtatgcgggagcttt 99285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 607 - 669
Target Start/End: Original strand, 23488545 - 23488607
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  23488545 aatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccg 23488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 31158598 - 31158459
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || ||||  ||||| |  |||| | |||||| ||||||| |||||||    ||  ||| || |||| |||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggta----agattgcatacaataaaccaa 31158503  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  31158502 aaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 31158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 507 - 681
Target Start/End: Complemental strand, 17380404 - 17380237
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    ||||||||||   |||||||||||||||||| |||| | ||||||| |||||| | |||||   |||||||||| |||||||||    |||| || ||      
T  17380404 tggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggt----aaggttgtgtgc 17380309  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||  ||||| ||| ||||||||| |||||||||| ||| ||||||||| |||||||| ||| |||||||    
T  17380308 aatacacc--aaatgatggaaccccttcctggaccctgcggatgcgggagcttt-gtgcaccgggcttcccttta 17380237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 40762317 - 40762234
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  40762317 aaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 618
Target Start/End: Complemental strand, 29420046 - 29419945
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||  ||||||||| | |||| || |||||||| |||||   |||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  29420046 taaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaa 29419947  T
Q  617 aa 618  Q
    ||    
T  29419946 aa 29419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 643
Target Start/End: Original strand, 5450263 - 5450384
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||| |||||   ||||||||||||||  || ||||    |||||||||| ||||||||     
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggta----aggctgcgtacaatacacc- 5450357  T
Q  616 aaaatggtgggaccccttcccggaccct 643  Q
     ||| ||||||||||||||| |||||||    
T  5450358 -aaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 24860143 - 24859999
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||| ||||||||||||||||| || |  ||||||  ||| ||| |||||   |||| ||||||||||| |||     |||||||||| ||||||||  |    
T  24860143 taaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggt-----aggctgcgtacaatacacc--a 24860051  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||| | |||||||| ||||||||||||||| ||||||||| ||||||||    
T  24860050 aatggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 24859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 525 - 669
Target Start/End: Original strand, 25641487 - 25641625
Alignment:
Q  525 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 624  Q
    |||||||||||||||||| | ||||||| |||||||| ||||| |  | |||||| ||||||||||    || | |||||| ||||||||  |||| |||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggt----aaagttgcgtacaatacacc--aaattgtg 25641580  T
Q  625 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||| | |||||||||| | ||||||| ||| ||||    
T  25641581 ggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccg 25641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 619 - 679
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 668
Target Start/End: Original strand, 19614981 - 19615116
Alignment:
Q  529 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 627  Q
    |||||||||||||| | ||||||| |||||||| |||||   ||||||| |||||| |||||||    || ||||||| |||| ||||| ||| |||| |    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggta----agactgcgtacaatataccaataatagtgg-a 19615075  T
Q  628 ccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||||| ||||||||||||  |||||||| |||||||    
T  19615076 ccccttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 661
Target Start/End: Complemental strand, 32781456 - 32781307
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 605  Q
    |||||||||| |||||||||||  ||||  |||||| | |||| || ||||||   |||||   |||||||||||||| |||||||    || |||||||    
T  32781456 tggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggta----agactgcgta 32781361  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
     |||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||    
T  32781360 caatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgggagctttg 32781307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 677
Target Start/End: Complemental strand, 45235975 - 45235820
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||| ||||||||||||||   |||| || |||||||||||||| ||||||| |||||||  |   ||||| |||||| |||  |||||||  |    
T  45235975 taaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataa---tagggtaaggctacgtgtaatacac--a 45235881  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
    ||||||||||||||||| || |||||| ||||||  |||||||| ||| ||| || |||||    
T  45235880 aaatggtgggaccccttaccagaccctacgtatgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 27573599 - 27573755
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||  ||| |||||||  | ||| | |||||||||| ||||| |||    ||||||||||| ||||||||  |    
T  27573599 taaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggt----aaggctgcgtacaatacacc--a 27573692  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| |||  |||||  |||||| ||||| ||||||||| ||||| || | ||||||||    
T  27573693 aatggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgcccttt 27573755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 661
Target Start/End: Original strand, 33795263 - 33795401
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta-aaatacacca 615  Q
    |||||||||||||| |||| ||||| | ||||||| |||||||  |||||   |||||| ||||||| |||||||    |||||||||| |||||||||     
T  33795263 taaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggta----aggctgcgtacaaatacacct 33795358  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    |   ||||||||||||||||| ||||||| ||||| ||||||||||    
T  33795359 a---tggtgggaccccttcccagaccctgtgtatgcgggagctttg 33795401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 666
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 15296490 - 15296406
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||||| || ||||||||||| ||  ||||||||||    
T  15296490 aaggctgcgtacaatataccaaaa-tagtgggatcccttctcggaccctgcgtatgtggaagctttggtgcgccaggctgcccttt 15296406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 681
Target Start/End: Complemental strand, 19185823 - 19185742
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||| ||| ||| ||||||||||| ||||||||| |||||||||||||| ||||||||| || || |||| | |||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagctttagtacatcgagttacccttta 19185742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 668
Target Start/End: Complemental strand, 19977869 - 19977726
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaa 618  Q
    |||||||||||||||||| |||| | ||||||| ||||| || ||||| | ||||| ||||||||     ||||  |||| |||||| |||||||||||     
T  19977869 aagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaa----taggataaggttgcgtacaatacaccaaa- 19977775  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
     |||||||| ||||||||| ||| || ||||| ||||||||| |||||||    
T  19977774 -tggtgggatcccttcccgaaccttgtgtatgcgggagctttagtgcacc 19977726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 667
Target Start/End: Original strand, 24890463 - 24890533
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    |||||||| || ||||||||||   |||||||||||||||||||||||||||||||  |||||||| ||||||    
T  24890463 aaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 39914463 - 39914306
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    |||||||||||||||||||||| || | ||||||  ||||| || |||||   ||||||||||||||  ||||||| |||    || ||| ||||||||     
T  39914463 taaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaagga----tgtgtacaatacaccg 39914368  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||  |||||||||||||||| | |||||||||||| ||||||||| ||||| || | ||||||||    
T  39914367 aa--tggtgggaccccttcctg-accctgcgtatgcgggagctttagtgcatcgggttgcccttt 39914306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 656
Target Start/End: Complemental strand, 44449467 - 44449407
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 656  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||    
T  44449467 aaggctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggag 44449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 44604832 - 44604905
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    |||||||||||||||||||||| || | ||| ||| |||||||| |||||   |||||||||||||||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta 44604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 681
Target Start/End: Original strand, 8575975 - 8576031
Alignment:
Q  625 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  | |||||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcccttta 8576031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 680
Target Start/End: Original strand, 34080176 - 34080236
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||| |||| ||||| ||| |||||||| | ||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgcccttt 34080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||||||||||||||||||||||||||| |||| ||||||||  |||||||| | ||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 626 - 680
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  626 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 25632561 - 25632644
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  ||||||||  |||||||| ||| | |||||| ||||||||| |||||||| | ||||||||    
T  25632561 aaggctgcgtacaatacaccaaa--tggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 660
Target Start/End: Complemental strand, 24059057 - 24059016
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  24059057 atggtgggacccctttccggaccctgcgtatgtgggagcttt 24059016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 17705473 - 17705537
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 582  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||    
T  17705473 taaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaa 17705537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 680
Target Start/End: Original strand, 22371199 - 22371247
Alignment:
Q  632 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 669
Target Start/End: Complemental strand, 26684683 - 26684631
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccg 26684631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 669
Target Start/End: Complemental strand, 124962 - 124925
Alignment:
Q  632 ttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccg 124925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 642
Target Start/End: Complemental strand, 23145855 - 23145736
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  23145855 taaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaa 23145760  T
Q  617 aaatggtgggaccccttcccggaccc 642  Q
       ||||||||||| |||||||||||    
T  23145759 t--tggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 642
Target Start/End: Complemental strand, 23557645 - 23557526
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  23557645 taaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaa 23557550  T
Q  617 aaatggtgggaccccttcccggaccc 642  Q
       ||||||||||| |||||||||||    
T  23557549 t--tggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 4e-43; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 519 - 680
Target Start/End: Complemental strand, 13628948 - 13628790
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| ||||||||||     
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaat 13628853  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  13628852 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 13628790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 26869707 - 26869863
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||| ||||||||||||||||    |||||||||| |||||||||||    
T  26869707 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggta----aggctgcgtacaatacaccaaa 26869802  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||| ||||||| |||||||| |||||||||||||||||| | ||||||||    
T  26869803 --tggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgcccttt 26869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 29366879 - 29366720
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||    
T  29366879 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaa 29366784  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||| | | ||||||||    
T  29366783 taatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgcccttt 29366720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 46421194 - 46421055
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  46421194 taaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 46421099  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
     ||||||||||||||||||||||||||||||||| |||||||||    
T  46421098 taatggtgggaccccttcccggaccctgcgtatgcgggagcttt 46421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 8247846 - 8247707
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||| |||||| ||||||||||    
T  8247846 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 8247751  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
     ||||||||||| ||||||||||||||||||||| |||||||||    
T  8247750 taatggtgggactccttcccggaccctgcgtatgcgggagcttt 8247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 13730761 - 13730602
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||    
T  13730761 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaa 13730666  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  13730665 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 13730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 507 - 679
Target Start/End: Original strand, 22609755 - 22609921
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||| | |||||||||||||||||||||| || |  |||||| |||||| | ||||| | ||||||||||||||||||||    |||||||||||     
T  22609755 tggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtac 22609850  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  22609851 aatacacc--aaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 40272969 - 40272812
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | || |||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  40272969 taaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 40272874  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  40272873 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 34420801 - 34420643
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  |||||||||    
T  34420801 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtaccatacaccaa 34420706  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    || |||||||||||||||||||||| |||||||| ||||||||| ||||||   ||||||||||    
T  34420705 aa-tggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcacatggctgcccttt 34420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 519 - 680
Target Start/End: Complemental strand, 5173876 - 5173719
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||||  |||    ||| ||| |  ||||||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta----aggttgcatgcaatacaccaaaa 5173781  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| |||||||||||||| |||||||| ||||||||| |||||||| | ||||||||    
T  5173780 atggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgcccttt 5173719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 39203516 - 39203672
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||| |||||| |||||||||||    
T  39203516 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa 39203610  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
      |||||||||||||||||||||| ||| |||| ||||||||| |||||||| | |||||||||    
T  39203611 --tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttta 39203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 16735441 - 16735597
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| |||| ||||||| |||||||| ||||| | |||||||  |||||||||||    ||||||||||| ||||||||  |    
T  16735441 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggt----aaggctgcgtacaatacacc--a 16735534  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||| ||||||||| || |||||  |||||| | | ||||||||    
T  16735535 aatggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgcccttt 16735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 518 - 679
Target Start/End: Complemental strand, 22123072 - 22122918
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||| |||||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  22123072 taaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 22122980  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||||||||||||||||||||| |||| | ||||| | |||||||| | |||||||    
T  22122979 aatggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 507 - 678
Target Start/End: Original strand, 26573116 - 26573282
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| |||||||||||    |||||||||||    
T  26573116 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggt----aaggctgcgta 26573211  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
     ||||||||  || |||||||||||| |||||||||||||||||| | ||||||| |||||||  ||||||||    
T  26573212 caatacacc--aattggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 526 - 680
Target Start/End: Original strand, 516417 - 516569
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa-tggt 623  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||| | |||| |||||||| |||     
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgcacaataaaccaaaaaatggc 516512  T
Q  624 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||    
T  516513 gggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 516569  T

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Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 546 - 681
Target Start/End: Complemental strand, 10795554 - 10795422
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 644  Q
    ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta----aggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 10795459  T
Q  645 cgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||| ||||||||  |||||||  | |||||||||    
T  10795458 cgtatgcgggagcttcagtgcaccaggttgcccttta 10795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 1217090 - 1217245
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||| ||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  1217090 taaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1217184  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      ||| |||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  1217185 --tggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 1217245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 681
Target Start/End: Complemental strand, 45786299 - 45786213
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||| | |||||||||    
T  45786299 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttta 45786213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 53996723 - 53996565
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||| |||||||||| ||||||||| | |||| || |||||| | |||||   |||||||||||||| |||||||    ||||||| || ||||||||||    
T  53996723 taaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggta----aggctgcttacaatacaccaa 53996628  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    || ||||||||||||||||| ||| ||||||||| ||||||||| |||||||| ||||||||||    
T  53996627 aa-tggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgcccttt 53996565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 670
Target Start/End: Complemental strand, 6411978 - 6411832
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||| ||||| | | || |||| |||||| |  |||| | |||||||||||||||||||||    |||||||||| |||||||||||    
T  6411978 taaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa 6411883  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 670  Q
      || |||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  6411882 --tgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccga 6411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 25944469 - 25944627
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||| |||||||||| | || |||| |||||||| ||||| | |||| |||||||||   ||   | ||||||| ||| |||||||||||    
T  25944469 taaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgg---gcaaggctgagtacaatacaccaaa 25944565  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | ||||||||||||||||| ||||||||||||| ||||||||| | |||||  ||||||||||    
T  25944566 a-tggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgcccttt 25944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 660
Target Start/End: Original strand, 9607203 - 9607342
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||  ||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| ||||||||||    
T  9607203 taaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtagaatacaccaa 9607298  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
     |||| |||||||||||||| ||||| || |||| |||||||||    
T  9607299 taatgttgggaccccttcccagaccccgcatatgcgggagcttt 9607342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 54484765 - 54484848
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  54484765 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 54484848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 678
Target Start/End: Complemental strand, 353434 - 353351
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||    
T  353434 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 554 - 669
Target Start/End: Original strand, 14986993 - 14987105
Alignment:
Q  554 caagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 652  Q
    |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||| |    
T  14986993 caagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  653 ggagctttggtgcaccg 669  Q
    |||||||| ||||||||    
T  14987089 ggagctttagtgcaccg 14987105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 609
Target Start/End: Complemental strand, 10870108 - 10870021
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 609  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    |||||||||||||||    
T  10870108 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtaaaat 10870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 520 - 661
Target Start/End: Complemental strand, 30928302 - 30928166
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| || ||||||||||||||      
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgtgtaaaatacaccaat- 30928208  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
     ||| |||||||||||||||||||||| |||| ||||||||||    
T  30928207 -tggcgggaccccttcccggaccctgcatatgtgggagctttg 30928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 34771447 - 34771364
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| ||||||||||    
T  34771447 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 34771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 679
Target Start/End: Complemental strand, 45139624 - 45139479
Alignment:
Q  529 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 627  Q
    |||||||||||||| | ||||||| |||||  | |||||   ||||||||||||| ||||||||    ||||||| || |||||||||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggta----aggctgcatacaatacaccaaaaatggtggga 45139529  T
Q  628 ccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    ||||||||| || |||||||||| |||| |||| |||||||| |||||||||    
T  45139528 ccccttcccaga-cctgcgtatgcgggaacttt-gtgcaccgggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 52926367 - 52926219
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||            | ||||||||||| |||||||||||    
T  52926367 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta------------gtaaggctgcgtacaatacaccaaa 52926280  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      ||||||||| ||||||||||||||||||||| ||||||||| | |||||| | ||||||||    
T  52926279 --tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgcccttt 52926219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 547 - 680
Target Start/End: Original strand, 31592878 - 31593004
Alignment:
Q  547 acgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcg 646  Q
    |||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||| ||||||||||||||||     
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgca 31592970  T
Q  647 tatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||| ||||||| | |||||||| | ||||||||    
T  31592971 tatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 49013558 - 49013473
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||| | ||||||||    
T  49013558 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgcccttt 49013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 7697042 - 7696903
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  7697042 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 7696950  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||     ||||||||||||| |||| |||| ||||||| | ||||||||    
T  7696949 aatgg-----ccccttcccggacactgcatatgtgggagctctagtgcaccg 7696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 15797294 - 15797377
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  15797294 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 15797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 660
Target Start/End: Original strand, 33926094 - 33926220
Alignment:
Q  529 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 628  Q
    |||||||||||||| | || |||| |||||||| ||||  | ||||||||||||||||||||    ||||||| ||| |||||||| | |||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggt----aaggctgtgtacaatacacc-ataatggtgggac 33926188  T
Q  629 cccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||| ||||||||| |||| | |||||||    
T  33926189 cccttcctggaccctgcatatgcgagagcttt 33926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 680
Target Start/End: Complemental strand, 25517251 - 25517170
Alignment:
Q  597 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||  |||||||| |||||||| | ||||||||    
T  25517251 ggctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgcccttt 25517170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 12914192 - 12914035
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||| ||||||| |||| | |||  || |||||||| ||||| | |||||||||||||| |||||||    |||| ||||| ||||||||||    
T  12914192 taaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcggcgtacaatacaccaa 12914097  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||| ||||||||||| |||||||| |||| ||||||||   ||||||| | ||||||||    
T  12914096 a--tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgcccttt 12914035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 649
Target Start/End: Original strand, 47624095 - 47624167
Alignment:
Q  571 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 649  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  47624095 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgtgtat 47624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 669
Target Start/End: Complemental strand, 829521 - 829453
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  829521 tgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 595 - 660
Target Start/End: Complemental strand, 54374429 - 54374365
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  54374429 aaggctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagcttt 54374365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 507 - 669
Target Start/End: Complemental strand, 45949009 - 45948849
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaa---acgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgc 602  Q
    |||||||| | | |||||||| |||||||||||||   | | ||||||| ||| |||| |||||   ||||||||||||||     ||||| ||||||||    
T  45949009 tggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaa----tagggtaaggctgc 45948914  T
Q  603 gtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     || ||||||||||   ||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  45948913 atacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Complemental strand, 24851364 - 24851301
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| | ||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgcccttt 24851301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 616
Target Start/End: Complemental strand, 45620997 - 45620890
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgt 604  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| ||||| || ||||| | ||||||||||  ||||||||||    ||||||||||    
T  45620997 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggt----aaggctgcgt 45620902  T
Q  605 aaaatacaccaa 616  Q
    | ||||||||||    
T  45620901 acaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 681
Target Start/End: Original strand, 55401254 - 55401335
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||| |||||||||||| ||||||||||||||| |||||| | |||||| |||||||||  ||||||| |||||| ||||    
T  55401254 ctgcgtataatacaccaaaa-tggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgggctgcctttta 55401335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 680
Target Start/End: Original strand, 30452892 - 30452952
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 30452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 676
Target Start/End: Complemental strand, 44403619 - 44403559
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||||||||||||||||||||||| ||||||  | |||||| |||||||| ||||||    
T  44403619 aaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgcc 44403559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 667
Target Start/End: Original strand, 7942993 - 7943134
Alignment:
Q  521 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 619  Q
    ||||||||||||||||||| || | ||||| | |||||||| ||||| |  |||||| |||||| |||||||    || ||||||| |||||| ||||      
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggta----agactgcgtacaatacatcaaa-- 7943086  T
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    |||||||| ||||| || |||| |||||||| ||||||||| ||||||    
T  7943087 tggtgggatccctttccagaccatgcgtatgcgggagctttagtgcac 7943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 680
Target Start/End: Complemental strand, 10484671 - 10484616
Alignment:
Q  625 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10484616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 659
Target Start/End: Original strand, 12525414 - 12525543
Alignment:
Q  525 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggt 623  Q
    |||||||| ||||||||| | ||| ||| | |||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggta----aggctgcg--aagtacaccaaaaatggt 12525507  T
Q  624 gggaccccttcccggaccctgcgtatgagggagctt 659  Q
    ||||| ||||||  ||||||| ||||  ||||||||    
T  12525508 gggacaccttcctagaccctgtgtatacgggagctt 12525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 53062038 - 53062112
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta 591  Q
    ||||||||||||||||||||||||| | |||| || |||||||| ||||| | ||| ||||| ||||||||||||    
T  53062038 taaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 630
Target Start/End: Complemental strand, 4495821 - 4495714
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| ||||||||  |||  | || |||||| |||||||||||    ||||||||||| ||||||||      
T  4495821 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggt----aaggctgcgtacaatacacc-- 4495728  T
Q  617 aaatggtgggaccc 630  Q
    ||||||||||||||    
T  4495727 aaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 616 - 680
Target Start/End: Original strand, 40968611 - 40968675
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| ||||||||||  |||||| | |||| ||||||||| ||||| |||||||||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtgcatcgagctgcccttt 40968675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 680
Target Start/End: Original strand, 47624208 - 47624256
Alignment:
Q  632 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 47624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 595 - 660
Target Start/End: Original strand, 9276338 - 9276400
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||||||| |||||||||||  |||||| |||| ||||||||||||||||||| |||| ||||    
T  9276338 aaggctgcgtacaatacaccaaa--tggtgg-accctttcccggaccctgcgtatgcgggaacttt 9276400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Complemental strand, 46170030 - 46169988
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 659  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  46170030 aaatggtaggaccccttcccggaccctgcatatgtgggagctt 46169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 35417905 - 35417982
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||| | |||||||||| |||||||||||| | | |||| || ||| |||| ||||| | ||||||||||||||    
T  35417905 tggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaa 35417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 680
Target Start/End: Complemental strand, 45416986 - 45416934
Alignment:
Q  627 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||  | |||||| |||||||| ||||||||||    
T  45416986 accccttcccggaccctgcgtatgcagaagcttt-gtgcaccgggctgcccttt 45416934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 3e-41; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 38879559 - 38879718
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||    
T  38879559 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaa 38879654  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  38879655 taatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38879718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 43334180 - 43334339
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||| ||||||||||  |||||||    |||||||||| |||||||||    
T  43334180 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggta----aggctgcgtacaatacacca 43334275  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| | ||||||||    
T  43334276 aaaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgcccttt 43334339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 660
Target Start/End: Original strand, 27328730 - 27328869
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||||||||| |||||||    |||||||||| ||||||||||    
T  27328730 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 27328825  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
     |||||||||||||||||||| |||||||||||| |||||||||    
T  27328826 taatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 27328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 41014297 - 41014453
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  41014297 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 41014390  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||| |||||| || |||| ||||||||| |||||||| | ||||||||    
T  41014391 aatggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 41014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 4619263 - 4619104
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||  | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  4619263 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 4619168  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||| || |||| | ||||||| |||||||| | ||||||||    
T  4619167 taatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgcccttt 4619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 24448868 - 24449025
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | || |||||||||||     ||||| ||||||||||| ||||||||||    
T  24448868 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaa----tagggtaaggctgcgtacaatacaccaa 24448963  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||    
T  24448964 a--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgcccttt 24449025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 527 - 680
Target Start/End: Original strand, 32703411 - 32703557
Alignment:
Q  527 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 626  Q
    |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtggg 32703503  T
Q  627 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  32703504 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 32703557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 8170139 - 8169984
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | || |||||||||| |||||||    |||||||||| |||||||||||    
T  8170139 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 8170045  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||| ||  |||||||| | ||||||||    
T  8170044 --tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttt 8169984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 507 - 680
Target Start/End: Complemental strand, 19143110 - 19142943
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||||| |||| ||||||||| |||||| ||| | ||| ||| |||||||| |||||   ||||||||||||||||||||    |||||||||||     
T  19143110 tggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggt----aaggctgcgtac 19143015  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | ||||||  ||||||||||||||||||||||||| |||||||| ||||| ||| |||||| |  |||||||||    
T  19143014 agtacacc--aaatggtgggaccccttcccggaccatgcgtatgcgggagatttagtgcactggcctgcccttt 19142943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 35710291 - 35710446
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||  |||||||||||    
T  35710291 taaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctgcgttcaatacaccaaa 35710385  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||| | ||| |||| ||||||| | |||||||| | ||||||||    
T  35710386 --tggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgcccttt 35710446  T

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Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 600 - 681
Target Start/End: Complemental strand, 12575739 - 12575659
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||    
T  12575739 tgcgtacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttta 12575659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 681
Target Start/End: Complemental strand, 13801895 - 13801766
Alignment:
Q  549 gggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgt 647  Q
    |||| |||||||| ||| | | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||||||||||||||| || |    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcat 13801800  T
Q  648 atgagggagctttggtgcaccgagctgcccttta 681  Q
    ||| | ||||||| |||||||| | |||||||||    
T  13801799 atgcgagagctttagtgcaccgggttgcccttta 13801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 507 - 669
Target Start/End: Original strand, 43574564 - 43574730
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacac---------gggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaa 596  Q
    ||||||||||||||||||||||||| |||||||||| | |||         | || |||||||| |||||  ||||||||||| |||||||||||    |    
T  43574564 tggcgcaatgataaagttgttgtcacgtgactgaaaggtcacttcggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggta----a 43574659  T
Q  597 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  43574660 ggctgcgtacaatataccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccg 43574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 7097863 - 7097759
Alignment:
Q  571 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 670  Q
    |||||||||||||||||||||    ||| |||||| |||||||||||  ||||| |||||||||||| |||||||||||| ||||||||| |||||||      
T  7097863 ctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcaccat 7097770  T
Q  671 gctgcccttta 681  Q
    |||||||||||    
T  7097769 gctgcccttta 7097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 507 - 669
Target Start/End: Original strand, 39301090 - 39301247
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | ||||||||||||||||| ||||||| | ||||||| |||||| | | |||   |||||||||| ||||||||||    |||| ||||||    
T  39301090 tggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggt----aaggatgcgta 39301185  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     ||| ||||||||| ||||||||||||||||||||||| |||||| ||||| ||| ||||||||    
T  39301186 taatgcaccaaaaa-ggtgggaccccttcccggaccctccgtatgtgggag-tttagtgcaccg 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 666
Target Start/End: Original strand, 2838756 - 2838899
Alignment:
Q  518 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| ||| | |||| |  ||||||  |||||| |  ||||||||||||||||||||    |||||||||| ||||||||||    
T  2838756 taaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggta----aggctgcgtacaatacaccaa 2838851  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |  |||||||| |||||| ||||||||||||||| |||||| | ||||||    
T  2838852 a--tggtgggatcccttctcggaccctgcgtatgcgggagcatcggtgca 2838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 669
Target Start/End: Original strand, 25622524 - 25622584
Alignment:
Q  609 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 25622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 16957386 - 16957449
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  16957386 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 16957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 209084 - 208938
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||| ||| | |||  || |||||||| | |||   |||||||||||||||||||||    ||||||| |  |||||||||||    
T  209084 taaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggta----aggctgcattcaatacaccaaa 208989  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    | |||||||||||||||| |||||||| |||||   ||||||| ||||||||    
T  208988 a-tggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccg 208938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 29334447 - 29334531
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||| ||||  ||||||| ||||||||||    
T  29334447 aaggctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgcccttt 29334531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 607 - 679
Target Start/End: Complemental strand, 12006401 - 12006329
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||| | |||||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 595 - 679
Target Start/End: Original strand, 20135656 - 20135740
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||  |||||||  |||||||| | |||||||    
T  20135656 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 583
Target Start/End: Complemental strand, 22861826 - 22861758
Alignment:
Q  515 tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa 583  Q
    |||||||||||||||||||||||||||| | ||||| | |||||||||||| | |||||||||||||||    
T  22861826 tgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 660
Target Start/End: Original strand, 22600432 - 22600569
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||| ||||||||||| || |  |||||| |||||||| |||||  | | |||||||||| ||||||||    |||||| ||| ||||||||||    
T  22600432 taaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta----aggctgtgtacaatacaccaa 22600527  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |  |||||||| ||||||||||| |||||||||| |||||||||    
T  22600528 a--tggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 681
Target Start/End: Complemental strand, 34154897 - 34154813
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| || |||| | |||||||| | |||||||||    
T  34154897 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttta 34154813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 555 - 669
Target Start/End: Original strand, 7368413 - 7368520
Alignment:
Q  555 aagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggg 654  Q
    ||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtggg 7368505  T
Q  655 agctttggtgcaccg 669  Q
    |||| | ||||||||    
T  7368506 agctctagtgcaccg 7368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 10306546 - 10306494
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10306546 aatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttt 10306494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 12477204 - 12477120
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||   ||||||| ||||||| | |||||||||    
T  12477204 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacccaactgcccttt 12477120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 677
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| |||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 37024711 - 37024646
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa 583  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||    
T  37024711 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 1565409 - 1565567
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||| ||||||| |   ||   ||||||||||| ||| |||||||    
T  1565409 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaaca-tatt-aaggctgcgtacaatgcaccaaa 1565506  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
      ||| |||||||||||||||||||||| |||| |||||| || |||||||| | |||||||||    
T  1565507 --tggcgggaccccttcccggaccctgcatatgtgggagc-ttagtgcaccgggttgcccttta 1565567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 680
Target Start/End: Original strand, 3771414 - 3771474
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| |||||||| ||||||||||    
T  3771414 tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgcccttt 3771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 16880730 - 16880658
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||| |||||||| ||||||||| ||||||||    
T  16880730 aaggctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 28516591 - 28516453
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| ||| |||||| | ||||||| |||||| | |||||   |||||||||| |||||||| |||    ||||||||| |||||| | |    
T  28516591 taaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctag----ggctgcgtacaatacatc-a 28516497  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||| ||||| ||||||||| |||  ||||||||    
T  28516496 aaatggtgggacccattcccagaccctgcgcatgcaggagcttt 28516453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 23974747 - 23974824
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||| | |||||||||||||||||||||| || | ||||||| |||||||| |||||   ||||||||||||||    
T  23974747 tggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 680
Target Start/End: Original strand, 19093884 - 19093948
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||| |||||||| ||||||||||    
T  19093884 aaaatggtatgacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgcccttt 19093948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 681
Target Start/End: Complemental strand, 30877623 - 30877563
Alignment:
Q  621 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttta 30877563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 621 - 680
Target Start/End: Complemental strand, 16028683 - 16028624
Alignment:
Q  621 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 16028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 11657783 - 11657699
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| || |||||||||||| |||||||||||||||||| |||||||  | | |||| |||| || ||||| ||||||||||    
T  11657783 aaggctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttt 11657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 658
Target Start/End: Complemental strand, 21542530 - 21542489
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagct 658  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  21542530 aaatggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 669
Target Start/End: Original strand, 39801591 - 39801640
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||||| |||||| |||||| ||||||||| ||||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccg 39801640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 680
Target Start/End: Complemental strand, 10943900 - 10943845
Alignment:
Q  624 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||| ||||||||||    
T  10943900 gggaccccttcccggaccctgc-aatgcgggagctttagtgcaccgggctgcccttt 10943845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 632
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  525 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 624  Q
    ||||| |||||||||||| | || |||| ||||||| |||||| | ||||||||||||||||| ||    |||| ||| || ||||||||  ||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagt----aaggttgcatacaatacacc--aaatggtg 22907921  T
Q  625 ggacccct 632  Q
    ||||||||    
T  22907920 ggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 680
Target Start/End: Original strand, 32354211 - 32354262
Alignment:
Q  629 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||| ||||| ||||||||| |||||||| | ||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttt 32354262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 674
Target Start/End: Complemental strand, 4654479 - 4654421
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctg 674  Q
    |||||||||||| |||||| || ||||||| |||| ||||||||| ||||||| |||||    
T  4654479 aaaatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcaccaagctg 4654421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 584
Target Start/End: Original strand, 22187263 - 22187329
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    ||||||||||||||| ||||||||| | ||| |||  ||||||| ||||| | ||||||||||||||    
T  22187263 taaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaa 22187329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 678
Target Start/End: Original strand, 13774949 - 13774998
Alignment:
Q  629 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccct 13774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 28208269 - 28208240
Alignment:
Q  513 aatgataaagttgttgtcatgtgactgaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  28208269 aatgataaagttgttgtcatgtgactgaaa 28208240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 676
Target Start/End: Complemental strand, 39079823 - 39079755
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||||||| |||||||||||||||||||||| || ||||  ||||| ||| |||||| | ||||||    
T  39079823 aatacaccaaaa-tggtgggaccccttcccggaccatgtgtatacgggagttttagtgcacagggctgcc 39079755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 42924917 - 42924841
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccgg--accctgcgtatgagggagctttggtgcaccg 669  Q
    |||| |||||| ||||||||||||||| ||| | |||||||| |  |||||||||||| || |||||| ||||||||    
T  42924917 aaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcgtatgcggaagctttagtgcaccg 42924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 523 - 680
Target Start/End: Complemental strand, 29356009 - 29355855
Alignment:
Q  523 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaatg 621  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| |||||||||| ||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaataatg 29355914  T
Q  622 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  29355913 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 29355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 12222074 - 12221914
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  12222074 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 12221979  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||    
T  12221978 taatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcccttt 12221914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 9161101 - 9161247
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||| |||    |||||||||| |||||| |||     
T  9161101 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagta----aggctgcgtacaatacatcaat 9161196  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    ||||||||||||||||| ||||||||||||||| || |||||| |||||||    
T  9161197 aatggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcacc 9161247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 1346942 - 1347097
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | | ||||||||||| |||||||    |||||||||| |||||||||||    
T  1346942 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1347036  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  1347037 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 1347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 1354912 - 1354757
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  1354912 taaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1354818  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  1354817 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 1354757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 2166569 - 2166410
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||    
T  2166569 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaa 2166474  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | ||||||||    
T  2166473 taatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgcccttt 2166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 2178202 - 2178043
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||    
T  2178202 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaa 2178107  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | ||||||||    
T  2178106 taatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgcccttt 2178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 599 - 680
Target Start/End: Original strand, 12885967 - 12886048
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 12886048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 600 - 680
Target Start/End: Original strand, 12892064 - 12892144
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 12892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 507 - 677
Target Start/End: Complemental strand, 13905147 - 13904984
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||  ||||||||  |||||  |||||||||| ||||||||||    |||||||| ||    
T  13905147 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggt----aaggctgcata 13905052  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
     ||| ||||  ||||||| |||||| |||||| ||||||||||| | |||||||| |||||||| |||||||    
T  13905051 caattcacc--aaatggt-ggaccctttcccgaaccctgcgtatcacggagcttt-gtgcaccgggctgccc 13904984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 681
Target Start/End: Complemental strand, 7947455 - 7947370
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||||   |||||||||||    
T  7947455 aaggctgcgtacaatacaccaaaa-tggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcacttggctgcccttta 7947370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 3815234 - 3815088
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta-gggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | || |||||||||||     || || | | ||||||| ||||||||      
T  3815234 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa----atatggtacgactgcgtacaatacacc-- 3815141  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||| |||||| ||||| |||||| || |||||| ||||||||    
T  3815140 aaatggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccg 3815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 607 - 669
Target Start/End: Complemental strand, 3116202 - 3116140
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  3116202 aatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccg 3116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 618 - 680
Target Start/End: Original strand, 6808468 - 6808530
Alignment:
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||| | ||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttt 6808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 681
Target Start/End: Complemental strand, 10734965 - 10734904
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||| |||||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttta 10734904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 680
Target Start/End: Complemental strand, 23930188 - 23930127
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgcccttt 23930127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 642
Target Start/End: Original strand, 6024211 - 6024332
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||| || || | ||||| | ||| |||||||||| | |||||||||||||| || ||||    || ||||||| ||||||||||    
T  6024211 taaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggta----agactgcgtacaatacaccaa 6024306  T
Q  617 aaatggtgggaccccttcccggaccc 642  Q
     |||| ||||||| ||||||||||||    
T  6024307 taatgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 13267797 - 13267860
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |||||||| | ||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttt 13267860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 26097210 - 26097293
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  ||  |||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  26097210 aaggctgcgtacaatacaccaaa--tgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 26097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 620 - 681
Target Start/End: Original strand, 11395836 - 11395896
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||||||||||| |||||||||| ||||||||| || ||||| |||||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccaccg-gctgcccttta 11395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 658
Target Start/End: Original strand, 14553490 - 14553626
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||| ||| | ||| ||| |||||||| ||||  |  |||||||||||||     ||||| ||||||| ||| ||||||||||    
T  14553490 taaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaa----tagggtaaggctgtgtataatacaccaa 14553584  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagct 658  Q
    || |||||||||||||||   ||||||| ||||| |||||||    
T  14553585 aactggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 24097649 - 24097692
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagcttt 24097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 595 - 650
Target Start/End: Original strand, 24734694 - 24734749
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 650  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  24734694 aaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatg 24734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 584
Target Start/End: Original strand, 8409221 - 8409287
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||||||| |||||||||||| | ||||| | |||||||| ||||| | ||||||||||||||    
T  8409221 taaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 669
Target Start/End: Complemental strand, 14975163 - 14975101
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||| |||||||||||||||||||| |||| || |||| ||||| ||| ||||||||    
T  14975163 aatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccg 14975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 14975237 - 14975171
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||||||||||||||||| || | ||||| | |||||||| ||||| | ||||||||||||||    
T  14975237 taaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 678
Target Start/End: Complemental strand, 15866194 - 15866041
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||| ||||||| ||||| | || |||| ||| |||| ||||| | |||||  || |||||||||||    || |||||||  ||||||||      
T  15866194 taaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggt----aaagctgcgt--aatacacc-- 15866103  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||||||||||||||||||||||||||||||| || |||| || | |||||| ||| ||||||    
T  15866102 aaatggtgggaccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 25557775 - 25557858
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  ||  || ||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  25557775 aaggctgcgtacaatacaccaaa--tgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 25557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 584
Target Start/End: Original strand, 12063442 - 12063511
Alignment:
Q  515 tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    ||||||||||||| ||||| |||||||| | ||||||| |||||||||||||  | ||||||| ||||||    
T  12063442 tgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 12889404 - 12889563
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| |||| ||||| | ||| ||| |||||| |  |||| | ||||||||| |||||||||| |    ||||||| || |||||||| |    
T  12889404 taaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggca----aggctgcatacaatacaccta 12889499  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||  | ||||||||||| |||||||||  || || ||||||||| ||||| || |||||||||||    
T  12889500 aac-gatgggacccctttccggaccctctgtgtgtgggagctttagtgcatcgggctgcccttta 12889563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 32579497 - 32579540
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagcttt 32579540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 568
Target Start/End: Complemental strand, 33922985 - 33922935
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacg 568  Q
    ||||||||||||||| ||||||||| | ||| ||| |||||||||||||||    
T  33922985 taaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacg 33922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 681
Target Start/End: Complemental strand, 383837 - 383759
Alignment:
Q  601 gcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||||||| ||||||||  || ||||| | |||||||||    
T  383837 gcgtacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttta 383759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 636
Target Start/End: Complemental strand, 2755507 - 2755466
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 636  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  2755507 aaggctgcgtacaatacaccaaaaatggtgggagtccttccc 2755466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 2e-39; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 13160680 - 13160837
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  13160680 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 13160773  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||| ||| | |||||||||    
T  13160774 aatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttta 13160837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 39461153 - 39460994
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||| |||||||| | ||||||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  39461153 taaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaa 39461058  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  39461057 taatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 39460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 21070859 - 21070708
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |     || ||||||||||| ||||||||||     
T  21070859 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaat 21070760  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 21070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 20284230 - 20284080
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |    |||| ||||||||||| ||||||||||    
T  20284230 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaa--agggtaaggctgcgtacaatacaccaa 20284133  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  20284132 taatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 20284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 12670405 - 12670261
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  12670405 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 12670313  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  12670312 aatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 12670261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 28817783 - 28817626
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||| |    
T  28817783 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccca 28817688  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||| || | ||||||||    
T  28817687 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgcccttt 28817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 35261657 - 35261814
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||| ||| ||||| |||||||||||||||| |||||||    ||| |||||| ||||||||||    
T  35261657 taaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 35261752  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  35261753 a--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 35261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 36720774 - 36720919
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  36720774 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 36720869  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |  ||||||||||||||||||||||||||||||| || |||||| |||||||    
T  36720870 a--tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacc 36720919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 518 - 679
Target Start/End: Original strand, 45071243 - 45071398
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||| || || | ||||||| ||||| || ||||| | |||||||||||||||||||||    |||||||||| |||||||||||    
T  45071243 taaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa 45071338  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
      |||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  45071339 --tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 7136686 - 7136538
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | || |||| |||||||| |||||   ||||||||||||||| ||||||    |||||||||| ||||||||||    
T  7136686 taaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggta----aggctgcgtacaatacaccaa 7136591  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     ||||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  7136590 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 7136538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 507 - 678
Target Start/End: Complemental strand, 44781674 - 44781506
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||||||| ||||||||||   ||||||| |||||||| |||||   ||||||||||||| ||||||||    |||||| |||    
T  44781674 tggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggta----aggctgtgta 44781579  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
     ||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  44781578 caatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcactgtgctgccct 44781506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 661
Target Start/End: Complemental strand, 24365217 - 24365078
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||||||||||| ||| | ||||||| |||| ||||||||| | ||||||||||||||  |||||||    |||||||| | |||||||||    
T  24365217 taaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggta----aggctgcgaacaatacacca 24365122  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||  ||||||||||||||||||||||||||||||| ||||||||||    
T  24365121 aa--tggtgggaccccttcccggaccctgcgtatgtgggagctttg 24365078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 30454252 - 30454097
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| || ||||    ||||||||||  ||||||||||    
T  30454252 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaggta----aggctgcgtacgatacaccaaa 30454158  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30454157 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 30454097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 6760800 - 6760959
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||| |||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||    
T  6760800 taaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcttcgtacaatacaccaa 6760895  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||| ||||||| || |||| ||||||||| |||||||| | ||||||||    
T  6760896 taatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 6760959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 520 - 669
Target Start/End: Complemental strand, 18164914 - 18164771
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 619  Q
    ||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||||||||||    ||| |||||| |||||||||||      
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaag- 18164820  T
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     | || ||||  ||||||||||||||||||| ||||||||| ||||||||    
T  18164819 -gatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccg 18164771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 17823554 - 17823712
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |||| |    ||| ||||||||||||||||      
T  17823554 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggat----aagactgcgtaaaatacacc-- 17823647  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||| ||||||||||| ||||||| ||||  |||||||| |||||||| | |||||||||    
T  17823648 aaatggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcccttta 17823712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 507 - 669
Target Start/End: Complemental strand, 29521854 - 29521696
Alignment:
Q  507 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgt 604  Q
    |||||||| |||||||||||||||| |||||||| || | ||||||| |||||||| ||||| | ||||||| | |||||||||||    ||||||||||    
T  29521854 tggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggt----aaggctgcgt 29521759  T
Q  605 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    | ||||||||  ||||||||||| ||| |||| ||||||||||||| ||||||||| ||||||||    
T  29521758 acaatacacc--aaatggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccg 29521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 26954110 - 26954270
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||||||||| |  || | ||||||| |||||||| ||||| | ||||||||||||||  |||||||    |||||||||| |||||||||    
T  26954110 taaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta----aggctgcgtacaatacacca 26954205  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | ||||||||||||||||||| ||||  || |||| ||||||||| |||||| | | ||||||||    
T  26954206 ataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgcccttt 26954270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 44530127 - 44530273
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||| ||||||||||||  || | ||||||| |||||| | |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  44530127 taaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 44530222  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |  |||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  44530223 a--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccg 44530273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 558 - 680
Target Start/End: Original strand, 20869941 - 20870060
Alignment:
Q  558 tcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 656  Q
    |||| ||||| |||||||||||||||| |||||||    |||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggag 20870036  T
Q  657 ctttggtgcaccgagctgcccttt 680  Q
    |||| |||||||| | ||||||||    
T  20870037 ctttagtgcaccgggttgcccttt 20870060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 657
Target Start/End: Complemental strand, 20869653 - 20869523
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||| ||| ||||||||||     
T  20869653 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgtgtacaatacaccaa- 20869560  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagc 657  Q
       |||| |||||||||||||||||||| |||| ||||||    
T  20869559 ---ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 546 - 680
Target Start/End: Complemental strand, 5135418 - 5135290
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 645  Q
    ||||||| |||||||| ||||| | |||||||||||||| || |  || ||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaa-agag--ggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgc 5135324  T
Q  646 gtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||  |||||||| |||||||| ||||||||||    
T  5135323 gtatgcaggagcttt-gtgcaccgggctgcccttt 5135290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 2626497 - 2626645
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |     || ||| ||||||| |||||||||||    
T  2626497 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa 2626596  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
      || |||||||||||||| |||||||| |||| ||||||||  |||||||    
T  2626597 --tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcacc 2626645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 25250500 - 25250659
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaa-ggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | |||  || |||||||| ||||| | || |||||||||||     ||||| | ||||||||| ||||||||||    
T  25250500 taaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaa----tagggtatggctgcgtacaatacaccaa 25250595  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     |||||||||||||||||||| |||| || |||| ||||| ||| |||||||| | ||||||||    
T  25250596 taatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcccttt 25250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 507 - 679
Target Start/End: Complemental strand, 42083867 - 42083699
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||| | |||| ||||||||| |||||||||| | ||||||| |||||||| ||||| | || |||||||||||  ||   || |||||||||||     
T  42083867 tggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatgg---ggcaaggctgcgtac 42083771  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    | || ||| |||||||||||||||||||||| |||||| ||| | ||||||||| |||||  | |||||||||    
T  42083770 agtatacc-aaaatggtgggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgccctt 42083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 660
Target Start/End: Original strand, 24245429 - 24245564
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacc-aa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||| |||   ||||||||    ||| || |||| ||| |||| ||    
T  24245429 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatgt---aacagggt----aagactacgtacaatgcaccaaa 24245520  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  24245521 aaattgtgggaccccttcctggaccctgcgtatgcgggagcttt 24245564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 595 - 678
Target Start/End: Original strand, 29877146 - 29877227
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||    
T  29877146 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 12625867 - 12626025
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    ||||||||||||| |||||||   | | ||||||  |||||||| |||||   ||||||||||||||  |||||||    || |||| || |||||||||    
T  12625867 taaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggta----agactgcatacaatacacca 12625962  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||  |||||||||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  12625963 aa--tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 12626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 591
Target Start/End: Original strand, 28407394 - 28407467
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    
T  28407394 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta 28407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 595 - 667
Target Start/End: Complemental strand, 17250960 - 17250888
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    ||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| ||||||    
T  17250960 aaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgcac 17250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 8897921 - 8897784
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||| | || | |||||||  ||||||| |||||   | ||||||||||||     ||||| |||||| |||| ||||||||||    
T  8897921 taaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa----tagggtaaggctacgtacaatacaccaa 8897826  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |  |||||||||||||||||||||||||| |||| |||||||||    
T  8897825 a--tggtgggaccccttcccggaccctgcatatgcgggagcttt 8897784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 599 - 669
Target Start/End: Original strand, 16225075 - 16225145
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccg 16225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 669
Target Start/End: Original strand, 16013511 - 16013580
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccg 16013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 624 - 680
Target Start/End: Original strand, 40444845 - 40444901
Alignment:
Q  624 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||    
T  40444845 gggaccccttgccggaccctgcgtatgttggagctttagtgcaccgagctgcccttt 40444901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 669
Target Start/End: Original strand, 5689683 - 5689755
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| |||||||||||  |||||| ||||||||||| ||| |||||||| ||||||||| ||||||||    
T  5689683 aaggctgcgtacaatacaccaaa--tggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccg 5689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 26102589 - 26102652
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  26102589 aaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgcccttt 26102652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||| |||||| |||||||||  ||||||| | ||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 669
Target Start/End: Original strand, 31457155 - 31457296
Alignment:
Q  522 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 621  Q
    |||||||||||||| |||||| | ||||||| ||||||||  ||||   |||||||||||||| |||  |    |||||||||| |||||| ||||  ||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaa----aggctgcgtacaatacatcaaa--tg 31457248  T
Q  622 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    || ||||||||||||  |||||||||||| ||||||| | ||||||||    
T  31457249 gtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccg 31457296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 620 - 669
Target Start/End: Original strand, 27507985 - 27508034
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccg 27508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 636
Target Start/End: Original strand, 43942376 - 43942417
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 636  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  43942376 aaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 8484021 - 8483949
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| ||||||||||   |||||||||||| |||| ||||||||||||| ||||||||| | ||||||    
T  8484021 aaggctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccg 8483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 650
Target Start/End: Original strand, 11748282 - 11748406
Alignment:
Q  523 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 621  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||| | ||||| |||||||| |||||||    || | ||||| |||| || |||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggta----agacagcgtacaatatacaaaaaatg 11748377  T
Q  622 gtgggaccccttcccggaccctgcgtatg 650  Q
    || ||||||||||||| | ||||| ||||    
T  11748378 gtaggaccccttcccgaatcctgcatatg 11748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 680
Target Start/End: Complemental strand, 35107374 - 35107311
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||| ||| ||||| || |||||| |||||||| | ||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgcccttt 35107311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 639
Target Start/End: Complemental strand, 23000365 - 23000260
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 625  Q
    ||||||||||||||||| | |||||||  ||||||| ||||| | |||||||||||||||| |||    |||| | | || ||||||||  |||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggt----aaggttccatacaatacacc--aaatggtgg 23000274  T
Q  626 gaccccttcccgga 639  Q
    ||||||||||||||    
T  23000273 gaccccttcccgga 23000260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 44742602 - 44742529
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| || ||| |||||| || ||||||||    
T  44742602 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccg 44742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 667
Target Start/End: Original strand, 19729392 - 19729462
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||  ||||||| | ||||||    
T  19729392 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatacgggagctctagtgcac 19729462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 680
Target Start/End: Complemental strand, 27468141 - 27468092
Alignment:
Q  631 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 27468092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 669
Target Start/End: Original strand, 26457781 - 26457851
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| ||||||||||   |||||||||||||  || |||| |||||||||||||||||| ||||||||    
T  26457781 aaggctgcgtacaatacaccaat--tggtgggacccct--cctgaccttgcgtatgagggagctttagtgcaccg 26457851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 645
Target Start/End: Complemental strand, 14018137 - 14018003
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | ||| |||||||||| |||| ||||| | || |||| |||||| | ||||| |||||||||||| ||||||||||     || |||||||    
T  14018137 tggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggt----gagactgcgta 14018042  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgc 645  Q
     |||||| | ||| |||||||||| ||||| |||||||||    
T  14018041 caataca-ctaaattggtgggaccacttcctggaccctgc 14018003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 666
Target Start/End: Original strand, 18595906 - 18595959
Alignment:
Q  613 ccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||| ||| |||||    
T  18595906 ccaaaaatgataggaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 584
Target Start/End: Complemental strand, 30962929 - 30962864
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||||||||||||| ||||| | ||||  | |||||||| ||||| | ||||||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaa 30962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 2e-36; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 5648237 - 5648393
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  5648237 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 5648330  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||| | | ||||||||    
T  5648331 aatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgcccttt 5648393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 518 - 679
Target Start/End: Complemental strand, 6430782 - 6430627
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  6430782 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 6430689  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||||||| |||||||||||||||||||| ||||||||| | |||||| | |||||||    
T  6430688 aatggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 518 - 681
Target Start/End: Complemental strand, 44363289 - 44363129
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | |||| || ||||||||  |||| | ||| |||||||||| ||||||||||    ||||||| ||  ||||||    
T  44363289 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtaggg----ctgcgtacaacgcaccaa 44363194  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  44363193 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 44363129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 660
Target Start/End: Original strand, 16911540 - 16911679
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||||||| | |||||||||| ||| |||||||    |||||||||| ||||||||||    
T  16911540 taaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggta----aggctgcgtacaatacaccaa 16911635  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
     ||||||||||||||||||||||||||||||| | |||||||||    
T  16911636 taatggtgggaccccttcccggaccctgcgtacgcgggagcttt 16911679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 54175031 - 54175200
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaa-cggtctcttgtgtaaaaacagggtagggaaggctgcgta 605  Q
    |||||||| ||||| ||||||||||||||||||||| | ||||| | |||||||| |||| | | |||||||||||||||||||||    ||||||||||    
T  54175031 tggcgcaacgataa-gttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggta----aggctgcgta 54175125  T
Q  606 aaatacaccaaaaatggtgggaccccttccc-ggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||| |||||||| ||||||||||    
T  54175126 caatacaccaaaa-tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgcccttt 54175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 670
Target Start/End: Original strand, 54730227 - 54730377
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||  ||| | ||||||| |||||||||||||| | |||||||||||||| |   ||||  ||||||||||| ||||||||||    
T  54730227 taaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaa---taggataaggctgcgtataatacaccaa 54730323  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 670  Q
     |||| ||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  54730324 taatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccga 54730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 16408760 - 16408601
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    || ||||||| ||||||||||    
T  16408760 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 16408665  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     |||||||| |||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  16408664 taatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 16408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 30639358 - 30639514
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||| ||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  30639358 taaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 30639451  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||| |||||||||||||||||||| |||| ||||||||| |||||| | | ||||||||    
T  30639452 aatggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgcccttt 30639514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 30352748 - 30352580
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa------cagggtagggaaggctgcgtaaaatac 611  Q
    |||||||||||||| ||||| |||| | |||||||   |||||| ||||| | ||||||||||||||      ||||||| | || |||||||| |||||    
T  30352748 taaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaatac 30352649  T
Q  612 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| | ||||||||    
T  30352648 accaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgcccttt 30352580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 40915807 - 40915952
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||||||    ||| ||||||||||| ||||||||  |    
T  40915807 taaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaca----aggtaaggctgcgtacaatacacc--a 40915900  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  40915901 aatggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccg 40915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 20224962 - 20225117
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | || |||| |||||||| |||||   ||||||||||||| |||||||    |||||||||| |||||||||||    
T  20224962 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 20225056  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  20225057 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 47528685 - 47528530
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  47528685 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 47528593  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||||  |||| ||||||| | |||||||| | ||||||||    
T  47528592 aatggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgcccttt 47528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 48598980 - 48598825
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  48598980 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 48598888  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||| ||| ||||  |||||| | |||||||| | ||||||||    
T  48598887 aatggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgcccttt 48598825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 518 - 650
Target Start/End: Complemental strand, 5306820 - 5306694
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||| |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||||||    |||| |||||| ||||||||  |    
T  5306820 taaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggt----aaggttgcgtacaatacacc--a 5306727  T
Q  618 aatggtgggaccccttcccggaccctgcgtatg 650  Q
    |||||||||||||||||||||||||||||||||    
T  5306726 aatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 23501771 - 23501924
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| ||||||      || | |||||||||||||| |||||||    ||| |||||| ||||||||||    
T  23501771 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 23501860  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     |||||||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||||||    
T  23501861 taatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 23501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 11054303 - 11054148
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||  |||| ||||||||||| ||||||||||    ||| ||||||| ||||||||  |    
T  11054303 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggt----aagactgcgtacaatacacc--a 11054211  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||| || ||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  11054210 aatggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 11054148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 612 - 680
Target Start/End: Complemental strand, 47482918 - 47482850
Alignment:
Q  612 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgcccttt 47482850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 680
Target Start/End: Complemental strand, 20639777 - 20639658
Alignment:
Q  557 gtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 655  Q
    ||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcggga 20639683  T
Q  656 gctttggtgcaccgagctgcccttt 680  Q
    ||||| |||||||| | ||||||||    
T  20639682 gctttagtgcaccgggttgcccttt 20639658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 21646942 - 21647090
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||| ||| |||||||| ||||| | ||||||||||||||     ||||| ||||||||||| |||| |||||    
T  21646942 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaa----tagggtaaggctgcgtacaatataccaa 21647037  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     ||||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  21647038 taatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 21647090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 35567148 - 35567305
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||| ||||||| | || |||| |||||| | ||||| | | |||||||||||| |||||||    |||||| ||| || |||||||    
T  35567148 taaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggta----aggctgtgtacaacacaccaa 35567243  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||||| ||||||||| || ||||||||| |||||||| ||||||||||    
T  35567244 a--tggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgcccttt 35567305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 20225126 - 20225212
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  20225126 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttta 20225212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 507 - 677
Target Start/End: Original strand, 25343154 - 25343321
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 605  Q
    |||||||||| |||||||||||||| |||||||| | | ||| ||| ||||| || ||||  |||||||||||||||| |||||||    ||||||||||    
T  25343154 tggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggta----aggctgcgta 25343249  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
     ||||||||||||| ||| |||||||||||  || |||||||||| | ||||||| | |||||  |||||||    
T  25343250 caatacaccaaaaagggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggctgccc 25343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 532 - 678
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  532 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 631  Q
    ||||||||||| | ||||||| |||||||| ||||  | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggacccc 29207947  T
Q  632 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    |||||||||||||| |||| ||||||| | |||||||| | ||||||    
T  29207946 ttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 520 - 660
Target Start/End: Complemental strand, 17043549 - 17043414
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    |||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||||||||||| ||||||||  ||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggt----aaggctgcgtacaatacacc--aa 17043456  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||| |||||||| ||||  ||||||||    
T  17043455 atggtgggaccccttcccagaccctgcatatgctggagcttt 17043414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 669
Target Start/End: Original strand, 19027818 - 19027972
Alignment:
Q  510 cgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaa 608  Q
    ||||||| || ||||||||||| |||||||||| | ||||||| |||||||| |||||    |||||||| |||||||||||    ||||||||||| ||    
T  19027818 cgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggt----aaggctgcgtacaa 19027913  T
Q  609 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||  || |||||||||||||| || ||| ||||||||| ||||||||| ||||||||    
T  19027914 tacacc--aattggtgggacccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 680
Target Start/End: Complemental strand, 9832469 - 9832313
Alignment:
Q  517 ataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||| ||||||| || ||||||||| | ||||||| ||||||||  |||| | ||||||||||||| |||||||    |||||||||| ||||||||||    
T  9832469 ataaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaa 9832375  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  |||||||||||||||||||||||||| ||||  ||| || | |||||||| | ||||||||    
T  9832374 a--tggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgcccttt 9832313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 507 - 669
Target Start/End: Complemental strand, 47441698 - 47441541
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||||||| |||||||||| | ||| ||| ||||||| |||||| ||||||| |||||||| ||||||    ||||||| |||    
T  47441698 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggt----aaggctgtgta 47441603  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     ||||||||  ||||||| |||||||||||||||||||| ||| |  |||||||| || |||||    
T  47441602 caatacacc--aaatggttggaccccttcccggaccctgagtaagcaggagctttcgtccaccg 47441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 23580365 - 23580208
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| |||||||||| | ||||||| ||||| |||||||  | |||||||||| |||||||    |||||| |||||||  ||||||| |    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacag----gggaagactgcgtaggatacacc-a 23580271  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||| | |||||||||  ||| |||| ||||| ||||||||| |||||||||||||||||||    
T  23580270 aaatggcgagaccccttcttgga-cctgtgtatgtgggagctttagtgcaccgagctgcccttt 23580208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 681
Target Start/End: Complemental strand, 30690340 - 30690175
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac---agggtaggg-aaggctgcgtaaaatacac 613  Q
    |||||| ||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||||    |    |||| |||||||| || |||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacac 30690241  T
Q  614 caaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||   ||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||    
T  30690240 caat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttta 30690175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 20908720 - 20908636
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||   ||||||||||    
T  20908720 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgcccttt 20908636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 607 - 680
Target Start/End: Complemental strand, 33836560 - 33836487
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| || | ||||||||    
T  33836560 aatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgcccttt 33836487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 514 - 661
Target Start/End: Complemental strand, 32478946 - 32478810
Alignment:
Q  514 atgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacac 613  Q
    |||||||||||||||||||||||| || | | ||| ||| |||||||| |||||   |||| ||||||||||||||||    ||||||     |||||||    
T  32478946 atgataaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggta----aggctg-----aatacac 32478856  T
Q  614 caaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  32478855 caaa--tggtgggaccccttcccggacccagcgtatgcgggagctttg 32478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 618 - 681
Target Start/End: Complemental strand, 38755970 - 38755907
Alignment:
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 38755907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 558 - 679
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  558 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg-agggag 656  Q
    |||| ||||| |||||||||||||||||||||||    ||| |||||| |||||||||||  |||||||||||||||||| ||||||||||||  |||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggag 7909304  T
Q  657 ctttggtgcaccgagctgccctt 679  Q
    |||| ||||| || | |||||||    
T  7909303 ctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 661
Target Start/End: Original strand, 25463108 - 25463238
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 625  Q
    ||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||   || |   |||| |||||| || ||||||||  ||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactggga---aaggttgcgtacaacacaccaaa--tggtgg 25463202  T
Q  626 gaccccttcccggaccctgcgtatgagggagctttg 661  Q
    |||||||||||||||||||| |||| ||||||||||    
T  25463203 gaccccttcccggaccctgcatatgcgggagctttg 25463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 51865121 - 51865038
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| |||||||||  |||||||  |||||||||    
T  51865121 aaggctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgcccttt 51865038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 13256554 - 13256399
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||  ||| |||||||| ||    | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  13256554 taaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga----gcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 13256463  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||| |||||||||||||||| |||| || | || ||||||||| |||||||| | ||||||||    
T  13256462 taatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgcccttt 13256399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 681
Target Start/End: Original strand, 11394924 - 11394988
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | |||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11394988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 681
Target Start/End: Original strand, 11404651 - 11404715
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | |||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11404715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 670
Target Start/End: Complemental strand, 30496476 - 30496332
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    ||||||||||||| |||||||||| | |||| || |||||| | ||||| | |||||||||||| || |||||    ||||||| || |||||||||||     
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggta----aggctgcatacaatacaccaaa- 30496383  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 670  Q
     ||| ||||| |||||||||||| ||| ||||| |||||||| |||||||||    
T  30496382 -tggggggactccttcccggaccgtgcttatgatggagctttagtgcaccga 30496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 680
Target Start/End: Original strand, 47443963 - 47444092
Alignment:
Q  546 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 644  Q
    ||||||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  47443963 cacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 47444056  T
Q  645 cgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | ||||  |||||||  |||||| | | ||||||||    
T  47444057 catatgcaggagcttcagtgcactgggttgcccttt 47444092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 660
Target Start/End: Complemental strand, 49938746 - 49938613
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    ||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||| ||||| |       | ||| |||||||| |||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaag-------gtgtacaatacacc-aaa 49938655  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||||||||||||||  ||||||| |||| |||||||||    
T  49938654 atggtgggaccccttcccataccctgcatatgcgggagcttt 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 25629101 - 25629184
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||| |||||||| | ||||||||    
T  25629101 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgcccttt 25629184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 681
Target Start/End: Complemental strand, 40553998 - 40553936
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 40553936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 680
Target Start/End: Original strand, 32484307 - 32484368
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 32484368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 595 - 659
Target Start/End: Original strand, 49796849 - 49796911
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctt 659  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  49796849 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 666
Target Start/End: Original strand, 20405071 - 20405210
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 615  Q
    |||||||||||||||||||||| || | ||||||       ||||||||| | ||||||||||||||  |||||||    ||  |||||| ||||||| |    
T  20405071 taaagttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggta----agattgcgtacaatacacta 20405159  T
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    | ||||||||||||||||||||||||| || |||| ||||||||| |||||    
T  20405160 ataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 667
Target Start/End: Original strand, 21489143 - 21489210
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    ||||||| ||| |||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  21489143 ctgcgtacaatgcaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 521 - 669
Target Start/End: Complemental strand, 39077948 - 39077807
Alignment:
Q  521 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 620  Q
    |||||||||||||||| ||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    |||| |||||| |||| |||  ||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggttgcgtacaatatacc--aaat 39077856  T
Q  621 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||| |||  ||| ||||||||||| |||| ||||||| | ||||||||    
T  39077855 ggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccg 39077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 667
Target Start/End: Complemental strand, 41018945 - 41018807
Alignment:
Q  523 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 622  Q
    ||||||||| |||||||||| | ||||||| |||||||| |||||   |||||||||||||  |||||    |||||| |||| ||||||||  |||| |    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggt----aaggctacgtacaatacacc--aaatag 41018852  T
Q  623 tgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||    
T  41018851 tgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 507 - 591
Target Start/End: Complemental strand, 42164316 - 42164232
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    |||||||| | |||| |||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||||||||||||||    
T  42164316 tggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggta 42164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 14983906 - 14983949
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 14983949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 681
Target Start/End: Original strand, 25388249 - 25388312
Alignment:
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||||| | |||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttta 25388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 680
Target Start/End: Complemental strand, 36816466 - 36816384
Alignment:
Q  597 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||| ||||| ||||||||| ||| |||| | ||||||||    
T  36816466 ggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgcccttt 36816384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 38786681 - 38786744
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 38786744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 584
Target Start/End: Original strand, 14590815 - 14590881
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    ||||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  14590815 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 14590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 618 - 680
Target Start/End: Complemental strand, 50555718 - 50555656
Alignment:
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| ||||||||||||||||||||||||  |||| ||| |||||||| ||||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgcccttt 50555656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 678
Target Start/End: Complemental strand, 487292 - 487128
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||| ||||||    ||| || |||||||| ||||||| ||    
T  487292 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaaca----aggtaaagctgcgtacaatacactaa 487197  T
Q  617 aa-------atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    ||       |||| ||||||||||||||||  ||||| ||| ||||||||| |||||||| || |||||    
T  487196 aatggtgggatggcgggaccccttcccggattctgcgaatgcgggagctttagtgcaccgggcagccct 487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 17315455 - 17315382
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 591  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||| |||||   |||||||||||||||| ||||    
T  17315455 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggta 17315382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 616 - 677
Target Start/End: Original strand, 36589815 - 36589876
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
    |||||||||||||||||||| | |||||  ||||| |||||||||||||||||| |||||||    
T  36589815 aaaatggtgggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggctgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 666
Target Start/End: Original strand, 37494829 - 37494972
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||| |||| |||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    ||| ||| || |||| |||||    
T  37494829 taaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggttgcatacaatataccaa 37494924  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |  |||||||||||||| | ||||||||||||||  |||||||| |||||    
T  37494925 a--tggtgggacccctttcgggaccctgcgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 657
Target Start/End: Complemental strand, 7385628 - 7385499
Alignment:
Q  523 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 621  Q
    |||||||||||||||||||| | ||||||| |||| ||| ||||| | ||| ||||| ||||| |||||    |||| || ||  ||||||||  |||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggt----aaggttgtgtgcaatacacc--aaatg 7385535  T
Q  622 gtgggaccccttcccggaccctgcgtatgagggagc 657  Q
    ||||||||| ||||||||||||| ||||| ||||||    
T  7385534 gtgggaccctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 598 - 669
Target Start/End: Original strand, 16494272 - 16494343
Alignment:
Q  598 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||| ||||| || |||||| ||| ||||    
T  16494272 gctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtaccg 16494343  T

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Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 507 - 660
Target Start/End: Complemental strand, 30581635 - 30581485
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 604  Q
    |||||||| | ||||||||||||||  | ||| ||| | || |||| |||||| | |||||   ||||||||||||||  |||||||    ||| || ||    
T  30581635 tggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggta----agggtgtgt 30581540  T
Q  605 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    | |||||||||||| |||||||||||||||||||||||||| ||||  ||||||||    
T  30581539 acaatacaccaaaa-tggtgggaccccttcccggaccctgcatatgtaggagcttt 30581485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 507 - 677
Target Start/End: Original strand, 54966988 - 54967151
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 605  Q
    |||||||| | ||||||||||||||||||||||||| | |||  || ||||| || ||||    |||||||||||||| |||||||    ||| ||| ||    
T  54966988 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggta----aggttgc-ta 54967082  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
     |||| ||||||  |||||||||||||||||| ||||| | |||| ||||||||| |||||||| |||||||    
T  54967083 caatataccaaa--tggtgggaccccttcccgtaccctacatatgcgggagcttt-gtgcaccgggctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 55766623 - 55766466
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacac-gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||| | || | ||| |||| |||||  | ||||| || ||||||||  |||||||||    ||||||||||| |||||||       
T  55766623 taaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggt----aaggctgcgtacaatacac--t 55766530  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     |||||||| ||||| ||||||||| |||||||| | ||||||| |||||||| | ||||||||    
T  55766529 gaatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 656
Target Start/End: Complemental strand, 32629418 - 32629293
Alignment:
Q  525 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 624  Q
    |||||||||||||||||| | ||||||| ||| |||| ||||| | |||||||  |||||||||||    ||||| || | | ||||||| ||| ||| |    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggt----aaggccgcct-acatacacc-aaattggcg 32629325  T
Q  625 ggaccccttcccggaccctgcgtatgagggag 656  Q
    ||||||||||||||||| |||||||| |||||    
T  32629324 ggaccccttcccggaccttgcgtatgtgggag 32629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 680
Target Start/End: Original strand, 35532077 - 35532127
Alignment:
Q  630 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 35532127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 39029218 - 39029080
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||| ||||||| ||| | ||  ||| |||| | | ||||| | |||||||||||||| |||||||    |||||| ||| ||||||| ||    
T  39029218 taaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacacgaa 39029123  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    || |||||||||| ||| ||||||||||| |||| |||||||||    
T  39029122 aa-tggtgggaccactttccggaccctgcatatgcgggagcttt 39029080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 681
Target Start/End: Original strand, 44718641 - 44718703
Alignment:
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |  ||||| | |||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttta 44718703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 680
Target Start/End: Original strand, 19027986 - 19028046
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| |||||||||||||  | |||| ||||||||| |||||||| ||||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgcccttt 19028046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 679
Target Start/End: Complemental strand, 8473705 - 8473621
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggacccctt-cccgga-ccctgcgtatgagggagctttggtgcaccgagctgccctt 679  Q
    |||||||| || |||||||||||  |||||||||||||| |||||| |||||| |||| ||||||||| |||||||| | |||||||    
T  8473705 aaggctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 676
Target Start/End: Original strand, 28494223 - 28494282
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||||||||||||||| || ||||| |||| ||||||| | |||||||| ||||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgcc 28494282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 595 - 676
Target Start/End: Complemental strand, 9987917 - 9987838
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||| || |||||||||||  ||||||||||||||||  |||| ||| |||| |||||||||  ||||||| ||||||    
T  9987917 aaggctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgcc 9987838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 660
Target Start/End: Original strand, 2813181 - 2813242
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||| |||||| ||| ||||||||||||| |||||| ||  |||||||| |||||||||    
T  2813181 ctgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagcttt 2813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 35894540 - 35894492
Alignment:
Q  600 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 649  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||    
T  35894540 tgcgtacaatacaccaaaa-tggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 54640507 - 54640430
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||| | |||| ||||||||| ||| |||||| | ||||||| |||||| | ||||| | ||||||||||||||    
T  54640507 tggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 54640430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 30395885 - 30395726
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  30395885 taaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 30395790  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  30395789 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 30395726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 513 - 666
Target Start/End: Original strand, 27201643 - 27201793
Alignment:
Q  513 aatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatac 611  Q
    |||| ||||||||||||||||||||||||| | || |||| |||||||| ||||| | ||||||||| | ||||||||||    |||||||||| |||||    
T  27201643 aatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta----aggctgcgtacaatac 27201738  T
Q  612 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  27201739 accaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 18944644 - 18944804
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||| ||| |||| ||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  18944644 taaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 18944739  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||    
T  18944740 caatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcccttt 18944804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 507 - 661
Target Start/End: Original strand, 11596503 - 11596651
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||| | |||||| | |||||||||||||||| | ||||||| ||||||||||||||   ||||||||||||||||||||    |||||||||||     
T  11596503 tggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggt----aaggctgcgtat 11596598  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||    
T  11596599 aatacacc--aaatggtgggaccccttcctggaccctgcgtatgcgggagctttg 11596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 46248110 - 46247953
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    || ||||||| ||||||||||    
T  46248110 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 46248015  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||| |||| | ||||||||    
T  46248014 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgcccttt 46247953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 34725253 - 34725098
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| |||||||   |    
T  34725253 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacac--ta 34725161  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  34725160 aatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 34725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 27474282 - 27474427
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||| | ||||| |||||||||||||||||||    || || |||||||| |||||||        
T  27474282 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacag----ggcaaagctgcgtacaatacac--tg 27474375  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27474376 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 27474427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 35117925 - 35117765
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||| ||||||||    |||||| ||| ||||||||||    
T  35117925 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggta----aggctgtgtacaatacaccaa 35117830  T
Q  617 aaatggtgggaccccttcccggaccctgcgt-atgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||| |||||||| ||| ||||||    
T  35117829 aaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 20004249 - 20004090
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||| ||||||||| || ||||    |||||||||| ||||||||||    
T  20004249 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggta----aggctgcgtacaatacaccaa 20004154  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
     ||||||||||||||||||| ||||| || |||| ||||||||| |||||||| | ||||||||    
T  20004153 taatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20004090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 32632713 - 32632569
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  32632713 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 32632620  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||||||||||||||  ||||||| |||| ||||||||  |||||||    
T  32632619 aatggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcacc 32632569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 38478437 - 38478282
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||| |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  38478437 taaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 38478345  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| |||||||| |||||||||| |||| ||||||| | |||||||| | ||||||||    
T  38478344 aatggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 38478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 531 - 680
Target Start/End: Original strand, 10668239 - 10668385
Alignment:
Q  531 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacc 629  Q
    |||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| |||||| |||||||||| ||||||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgcgtacaatacaccaataatggtgggacc 10668334  T
Q  630 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||| ||||||||||| ||||||||| |||||||| | ||||||||    
T  10668335 ccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10668385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 46991805 - 46991951
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||| ||| |||||||| |    
T  46991805 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccga 46991900  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  46991901 a--tggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 46991951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 507 - 677
Target Start/End: Complemental strand, 18724713 - 18724549
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||| ||||||||||    ||||||| |||    
T  18724713 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggctgtgta 18724618  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
     ||||||||  ||||  ||||||||||||||||||||| | |||| ||||||||| ||||||| ||||||||    
T  18724617 caatacacc--aaatcttgggaccccttcccggaccctacatatgcgggagcttt-gtgcaccaagctgccc 18724549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 533 - 680
Target Start/End: Original strand, 35005139 - 35005283
Alignment:
Q  533 gtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 631  Q
    |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| |||||||    ||||||| || |||||||||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggta----aggctgcatacaatacaccaaaaatggtgggacccc 35005234  T
Q  632 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||| ||| ||||| |||||||| | ||||||||    
T  35005235 ttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgcccttt 35005283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 47214512 - 47214655
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||| | ||||||||||    |||| |||||| ||||||||  |    
T  47214512 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggt----aaggttgcgtacaatacacc--a 47214604  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    ||||||||||||||||||| |||||||| |||| ||||||| | |||||||    
T  47214605 aatggtgggaccccttcccagaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 14617039 - 14617185
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | |||| || |||||||| ||||| | |||||||||||| ||||    ||| |||| |||||| ||||||||      
T  14617039 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataaca----aggtaaggttgcgtacaatacacc-- 14617132  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  14617133 aaatggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccg 14617185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 518 - 676
Target Start/End: Original strand, 6925101 - 6925254
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||  | ||||||||||||||     ||||| ||||||||| | |||||||| |    
T  6925101 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaa----tagggtaaggctgcggacaatacaccga 6925196  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |  ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||    
T  6925197 a--tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgcc 6925254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 669
Target Start/End: Complemental strand, 18742118 - 18741968
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacc 614  Q
    ||||||||||||||||||||||||| | || |||| ||| || | | |||| |||| |||| ||||||  |||||||    |||||||||| ||||||||    
T  18742118 taaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggta----aggctgcgtacaatacacc 18742023  T
Q  615 aaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  18742022 aaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccg 18741968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 19414440 - 19414595
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||||||||  | ||||| ||||||| |||| ||    |||||||||| |||||||||||    
T  19414440 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa-caggtta----aggctgcgtacaatacaccaaa 19414534  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||| ||||||| |||| ||||||| | |||||||| | ||||||||    
T  19414535 --tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgcccttt 19414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 507 - 680
Target Start/End: Complemental strand, 6983977 - 6983811
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||||| |||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||| | |  |||||||||||| | |    ||||||     
T  6983977 tggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtata-aaaaacagggtaagta----tgcgtac 6983883  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||  |||||||||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||    
T  6983882 aatacaccaaa--tggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgcccttt 6983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 518 - 666
Target Start/End: Complemental strand, 23768477 - 23768334
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||| ||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  23768477 taaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 23768382  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |  ||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  23768381 a--tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 4349713 - 4349797
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  4349713 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 4349797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 519 - 669
Target Start/End: Original strand, 9939463 - 9939611
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||||| | |||| || |||||||| |||||   ||||||| ||| ||||| ||||    ||| |||||  |||||||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggta----aggttgcgtgcaatacaccaaa 9939558  T
Q  618 aatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||    
T  9939559 aatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccg 9939611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 507 - 669
Target Start/End: Complemental strand, 45812704 - 45812548
Alignment:
Q  507 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgta 605  Q
    |||||||| |||||||||||||||||||||||||||| | ||| ||| ||||||||  |||| |||||||||||||||  ||||||    ||||||| ||    
T  45812704 tggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag-agggta----aggctgcata 45812610  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     |||||||||||  |||||||||||||||||  ||||||| |||| ||||||| | ||||||||    
T  45812609 caatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccg 45812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 507 - 669
Target Start/End: Complemental strand, 2435955 - 2435797
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 605  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| ||||| |||||    ||| |||||||    
T  2435955 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggt----aagcctgcgta 2435860  T
Q  606 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
     |||||||| |||||||||||||||||| ||| ||||| || ||| ||||||||| ||||||||    
T  2435859 caatacacc-aaaatggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccg 2435797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 531 - 669
Target Start/End: Complemental strand, 35253329 - 35253198
Alignment:
Q  531 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 630  Q
    ||||||||||||   ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggaccc 35253237  T
Q  631 cttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||| |||| ||||||| | ||||||||    
T  35253236 cttcccggaccctgcatatgcgggagctctagtgcaccg 35253198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 42304292 - 42304218
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42304292 aaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 42304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 669
Target Start/End: Original strand, 45402096 - 45402243
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaagg-ctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||| || || |  |||||| |||||||| ||||| | ||||||||||||||||||||    |||  ||||||| ||||||||||    
T  45402096 taaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttc--aagttctgcgtacaatacaccaa 45402192  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |  ||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  45402193 a--tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccg 45402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 607 - 680
Target Start/End: Original strand, 50606488 - 50606561
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||||||    
T  50606488 aatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 50606561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 650
Target Start/End: Complemental strand, 19932838 - 19932783
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 650  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19932838 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 19932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 20036210 - 20036378
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 606  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||| |||||||| |||||   |||||||||||| | |  |  || |||  |||||      
T  20036210 tggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaag--ggtaagattgcgttc 20036307  T
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||  |||| ||| |||||||| ||||| ||||    
T  20036308 aatacacc--aaatggtggaaccccttcccggaccctgcgtatgcaggag-ttttgtgcaccgggctgctcttt 20036378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 518 - 656
Target Start/End: Complemental strand, 41319963 - 41319830
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | ||| |||  ||||||| ||||| |||||||||||| ||||||||||    ||||||||||| ||||||||      
T  41319963 taaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-- 41319870  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggag 656  Q
    ||||| ||||||||||||||| ||||| | |||| |||||    
T  41319869 aaatgatgggaccccttcccgaacccttcatatgcgggag 41319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 507 - 678
Target Start/End: Complemental strand, 15511319 - 15511150
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcg-- 603  Q
    |||||||||| |||||||||||| ||||| |||||| | |||   |  ||||||| ||||| | |||||||||||||| |||||||    ||||||||      
T  15511319 tggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggta----aggctgcgga 15511224  T
Q  604 taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 678  Q
    || |||||||||||| |||||| ||||||||| |||||||||||||| | ||||||| |||||||| ||||||||    
T  15511223 tacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgtgtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 19701571 - 19701717
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||| ||||||||||| | |||||||  ||||| |  |||| | ||||||||||||||     | || |||| || ||| |||||||||||    
T  19701571 taaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaac---ttggtaaggatgggtacaatacaccaaa 19701667  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    | ||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  19701668 a-tggtggggccccttcccggaccctgcgtatgcgggagctttagtgcacc 19701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 678
Target Start/End: Original strand, 22324925 - 22325049
Alignment:
Q  549 gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgta 648  Q
    |||| |||||| | ||||| | |||||||||||||||||||||    ||||||| || |||||||||||||||||||  |||| ||||| ||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcatacaatacaccaaaaatggtggagccccgtcccg-accctgcgta 22325019  T
Q  649 tgagggagctttggtgcaccgagctgccct 678  Q
    || ||||||||| |||||||  ||||||||    
T  22325020 tgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 12126992 - 12126837
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||| | ||||| | |||||||  |||| || ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||    
T  12126992 taaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 12126898  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      | |||||||||||||||||||||||| |||| ||||||| | |||||| | | ||||||||    
T  12126897 --ttgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgcccttt 12126837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 31442473 - 31442400
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  31442473 aaggatgcgtacaatacaccaaaa-tggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccg 31442400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 520 - 680
Target Start/End: Original strand, 8197046 - 8197201
Alignment:
Q  520 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaa 618  Q
    ||||||||||||||||||||||| | ||||||| |||||||| | ||  | ||||||||| ||||||| |||    |||||| |||| | ||||||  ||    
T  8197046 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggt----aaggctacgtacagtacacc--aa 8197139  T
Q  619 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||| |||||||||| |||||||||||||||  |||||||| ||| |||| | ||||||||    
T  8197140 atggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgcccttt 8197201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 666
Target Start/End: Complemental strand, 17470503 - 17470361
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||| |||||||||  | || |||| |||||||||||||| | |||||||||| ||||||||||    ||||||||||| |||||||| |    
T  17470503 taaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-a 17470409  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |||| ||||||||| |||| |   |||||||||| ||||||||| |||||    
T  17470408 aaatagtgggacccgttcctg--acctgcgtatgtgggagctttagtgca 17470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 658
Target Start/End: Complemental strand, 25468420 - 25468285
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||| ||||| | || |||| |||||||| |||||   |||||||||||||| ||||||    |||| |||||| ||||||||      
T  25468420 taaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggt----aaggttgcgtacaatacacc-- 25468327  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagct 658  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||    
T  25468326 aaatggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 677
Target Start/End: Complemental strand, 10378818 - 10378738
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
    ||||||||||| |||||||||||  |||||||||||||||  ||||||||| |||| ||||||||| |||||||| |||||||    
T  10378818 aaggctgcgtacaatacaccaaa--tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 645
Target Start/End: Complemental strand, 22930224 - 22930104
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | || |||||||||||||||||    |||| || | | ||||||||  |    
T  22930224 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggt----aaggttgtg-acaatacacc--a 22930132  T
Q  618 aatggtgggaccccttcccggaccctgc 645  Q
    |||||||||||||||||| |||||||||    
T  22930131 aatggtgggaccccttcctggaccctgc 22930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 680
Target Start/End: Original strand, 50811929 - 50812098
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 604  Q
    |||||||| | |||||||||||||| |||||||||| | |||||   || ||||| ||||| |  |||||||||||||  |||||||    ||| |||||    
T  50811929 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggta----aggttgcgt 50812024  T
Q  605 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    | |||||||||||| |||||| |||||||||||  ||||||||||| |||||||||  ||||| | ||||||||||    
T  50812025 acaatacaccaaaa-tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgcccttt 50812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 599 - 676
Target Start/End: Original strand, 15505643 - 15505717
Alignment:
Q  599 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||    
T  15505643 ctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccgaactgcc 15505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 558 - 660
Target Start/End: Complemental strand, 31382330 - 31382234
Alignment:
Q  558 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagc 657  Q
    |||| ||||| | |||||||||||||||||| ||    |||||||||| |||||||||||  |||||||||||||||| ||||||||| |||| ||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggata----aggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagc 31382237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 650
Target Start/End: Original strand, 25290164 - 25290300
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaa--acggtctcttgtgt-aaaaacagggt-agggaaggctgcgtaaaatacac 613  Q
    ||||||||||||||||||||||||| | |||| || |||||| | |||  || | ||||||||| ||||||||||| ||| |||| || ||| |||||||    
T  25290164 taaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacac 25290263  T
Q  614 caaaaatggtgggaccccttcccggaccctgcgtatg 650  Q
    |||||||| | |||||||||||| ||| |||| ||||    
T  25290264 caaaaatgataggaccccttcccagactctgcatatg 25290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 631
Target Start/End: Original strand, 33222985 - 33223093
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||| |  ||||| | ||||| | |||||||||||||||||    || |||| |||||| |||||||| ||    
T  33222985 taaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag----ggaaaggttgcgtacaatacacc-aa 33223079  T
Q  618 aatggtgggacccc 631  Q
    ||||||||||||||    
T  33223080 aatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 518 - 661
Target Start/End: Complemental strand, 44485266 - 44485128
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||| ||||| | |||||||   |||||| |||||   | ||||||||||| ||| ||||    |||||||||| ||||||||||    
T  44485266 taaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta----aggctgcgtacaatacaccaa 44485171  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    |  |||| ||||||||||||||| ||| |||||| ||||||||||    
T  44485170 a--tggttggaccccttcccggatcctacgtatgcgggagctttg 44485128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 30555210 - 30555273
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| |||||||| |||| |||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgaccttt 30555273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 1517394 - 1517311
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| ||||||||||   ||||||||||||||| | |||||||||||||  |||||||| |||||||| | ||||||||    
T  1517394 aaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgcccttt 1517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 20999933 - 20999850
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| ||||||||  ||||| |||| |||||||| | |||||||||| | ||||||||| |||||||| ||||||||||    
T  20999933 aaggctgcgtacaatacacc--aaatgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgcccttt 20999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 23796540 - 23796623
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||| |||||| |||||||||||  ||||| ||||||||||| |||||||| ||||  |||||||| |||||||| ||||||||||    
T  23796540 aaggttgcgtacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgcccttt 23796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 43768214 - 43768297
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||| || ||||||||||   ||||||||||||||||| ||||||||||||  |||||||||  ||||||| ||||||||||    
T  43768214 aaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgcccttt 43768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 669
Target Start/End: Complemental strand, 4587626 - 4587574
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||||||||||||||||||||| |||| ||||||||  ||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccg 4587574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 676
Target Start/End: Original strand, 22327101 - 22327250
Alignment:
Q  519 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||||||||||||||||| | | ||||| |||||||| |||||   ||||||||| |||||||||||    ||||||| |||  || |||| ||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggt----aaggctgtgtacgatgcacc-aa 22327195  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||||     |||||| || ||| ||||| |||||||||||||||||| ||||||    
T  22327196 aatggtggg----gttcccgaactctgtgtatgcgggagctttggtgcaccgggctgcc 22327250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 661
Target Start/End: Original strand, 30682907 - 30682951
Alignment:
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 661  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  30682907 aaatggtgggaccccttcccggaccgtgcgtatgcgggagctttg 30682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 680
Target Start/End: Complemental strand, 33594191 - 33594131
Alignment:
Q  620 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||| | ||| ||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctacccttt 33594131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 677
Target Start/End: Complemental strand, 39215042 - 39214961
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 677  Q
    ||||||||||| ||||  |||||| ||||||| |||||||||  |||||||||||| || |||||| |||||||| |||||||    
T  39215042 aaggctgcgtacaatattccaaaa-tggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 668
Target Start/End: Complemental strand, 45264471 - 45264411
Alignment:
Q  607 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| ||||||||| |||||||    
T  45264471 aatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 616
Target Start/End: Complemental strand, 50760394 - 50760288
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 605  Q
    |||||||| | |||||| |||||||||||||||| | | ||||||| ||||||||  |||| | |||||||||| ||||| ||||    |||||||||||    
T  50760394 tggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggt----aaggctgcgta 50760299  T
Q  606 aaatacaccaa 616  Q
     ||||||||||    
T  50760298 taatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 650
Target Start/End: Original strand, 6358199 - 6358250
Alignment:
Q  598 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 650  Q
    |||||||| || ||||||||| ||||||||||||||||| |||||||||||||    
T  6358199 gctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatg 6358250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 594
Target Start/End: Complemental strand, 25554890 - 25554803
Alignment:
Q  507 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg 594  Q
    |||||||||| |||||||||||||| |||||| ||| | |||| ||  ||||||| |||||   |||||||||| ||||| |||||||    
T  25554890 tggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgtagaaacacggtaggg 25554803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 561
Target Start/End: Original strand, 40424743 - 40424786
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcct 561  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||    
T  40424743 taaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 2436050 - 2435984
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| |||||   ||| ||||||||||    
T  2436050 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 626 - 680
Target Start/End: Complemental strand, 25554796 - 25554742
Alignment:
Q  626 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |||||||||||| |||||||||||| |||||| || ||||||||  |||||||||    
T  25554796 gaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggactgcccttt 25554742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 595 - 676
Target Start/End: Original strand, 35019305 - 35019383
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 676  Q
    |||||||| || ||||||||||   ||||||||||||| ||| ||||||||||||| | ||||||| |||||||| ||||||    
T  35019305 aaggctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgcc 35019383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 30557 - 30712
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| ||||||||||    ||||||| |||||||||||    
T  30557 taaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaggg----ctgcgtacaatacaccaaa 30651  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30652 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 526 - 681
Target Start/End: Original strand, 58963 - 59115
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtg 624  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    || ||||||| ||||||||||||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----agactgcgtacaatacaccaaaaatggtg 59058  T
Q  625 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||| || | |||||||||    
T  59059 ggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttta 59115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 680
Target Start/End: Complemental strand, 13180 - 13024
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| ||||||||| ||||    |||||||||| |||||||| ||    
T  13180 taaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggta----aggctgcgtacaatacaccgaa 13085  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
      ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| | ||||||||    
T  13084 --tggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgcccttt 13024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 60; Significance: 3e-25; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 518 - 680
Target Start/End: Original strand, 46809 - 46966
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||  || | ||||||| ||||| || |||||   ||||||||||||||     ||||| |||| |||||| ||||||||||    
T  46809 taaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaa----tagggtaaggttgcgtacaatacaccaa 46904  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  46905 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 666
Target Start/End: Complemental strand, 24924 - 24786
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    ||||||||||||||||||||||||| | || |||| ||||||     ||| | |||||||||||||| |||||||    |||||||||| || |||||||    
T  24924 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta----aggctgcgtacaacacaccaa 24834  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 666  Q
    |  |||||||||||||||||| |||||||||||| ||||||||| |||||    
T  24833 a--tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 660
Target Start/End: Complemental strand, 46771 - 46727
Alignment:
Q  616 aaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 660  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  46771 aaaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 46727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 595 - 680
Target Start/End: Original strand, 43709 - 43793
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| |||||||||| |||| ||||||| | |||||| ||| ||||||||    
T  43709 aaggctgcgtacaatacacc--aaatggtgggacccctttctcggaccctgcatatgcgggagctctagtgcactgagttgcccttt 43793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 667
Target Start/End: Original strand, 10788 - 10932
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||||||||||||| || | ||||||| ||||  ||  ||||   |||||||||||||| ||||||||||    ||||||  ||||||||||    
T  10788 taaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtaggg----ctgcgtccaatacaccaa 10883  T
Q  617 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 667  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10884 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 650
Target Start/End: Complemental strand, 10205 - 10080
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||    
T  10205 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaa 10111  T
Q  618 aatggtgggaccccttcccggaccctgcgtatg 650  Q
     |  |||||||||||||||||||||||| ||||    
T  10110 ta--gtgggaccccttcccggaccctgcatatg 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 650
Target Start/End: Complemental strand, 20533 - 20408
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||    
T  20533 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaa 20439  T
Q  618 aatggtgggaccccttcccggaccctgcgtatg 650  Q
     |  |||||||||||||||||||||||| ||||    
T  20438 ta--gtgggaccccttcccggaccctgcatatg 20408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 1742 - 1599
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    ||||||||||||||||||||||||| | || |||| ||||||||  ||||   ||||||||||||| |||| ||    ||||||| || |||||||||||    
T  1742 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa-caggata----aggctgcatacaatacaccaaa 1648  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 668  Q
      || |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  1647 --tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 643
Target Start/End: Original strand, 4135 - 4258
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 616  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| |    |||| |||||| ||||||||||    
T  4135 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggat----aaggttgcgtacaatacaccaa 4230  T
Q  617 -aaatggtgggaccccttcccggaccct 643  Q
     || ||||||||||||||||||||||||    
T  4231 taattggtgggaccccttcccggaccct 4258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 48717 - 48634
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 680  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  48717 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 11110 - 11265
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 617  Q
    |||||||||| | |||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||  |||    ||||||| || |||||||||||    
T  11110 taaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaagta----aggctgcttacaatacaccaaa 11203  T
Q  618 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
      ||||||||| |||||||||||||||| |||| ||||||| | |||||||  | |||||||||    
T  11204 --tggtgggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggttgcccttta 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 669
Target Start/End: Complemental strand, 24216 - 24144
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 669  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  24216 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 24144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 72997 - 72879
Alignment:
Q  546 cacgggtccaagtcctagaaacg-gtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccct 643  Q
    ||||||| ||||||||||||||  |||||||||||||||| || ||||    ||||||| || |||||||||||  |||| | ||||||||||||| |||    
T  72997 cacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggta----aggctgcctacaatacaccaaa--tggtagtaccccttcccggaacct 72904  T
Q  644 gcgtatgagggagctttggtgcacc 668  Q
    ||||||| ||||||||| |||||||    
T  72903 gcgtatgcgggagctttagtgcacc 72879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 3596 - 3680
Alignment:
Q  595 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttta 681  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | |||||||    
T  3596 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttta 3680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 226563 - 226497
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 584  Q
    ||||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  226563 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 226497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 649
Target Start/End: Complemental strand, 35167 - 35048
Alignment:
Q  526 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctctt--gtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 623  Q
    |||||||||||||| || | ||||||| ||||||||  |||| |||||||  |||| ||||||||||    ||||||||||| ||||||||  |||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggt----aaggctgcgtacaatacacc--aaatggt 35074  T
Q  624 gggaccccttcccggaccctgcgtat 649  Q
    ||||||| |||| ||| | |||||||    
T  35073 gggaccctttcctggatcttgcgtat 35048  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 43107 - 43176
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacag 587  Q
    ||||||| ||||||||||| ||||| | |||| || || ||||||||||| | |||||||||||||||||    
T  43107 taaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacag 43176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 83853 - 83894
Alignment:
Q  518 taaagttgttgtcatgtgactgaaacgacacgggtccaagtc 559  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  83853 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 83894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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