View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6911_low_19 (Length: 346)

Name: NF6911_low_19
Description: NF6911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6911_low_19
NF6911_low_19
[»] chr7 (29 HSPs)
chr7 (1-332)||(4828653-4828984)
chr7 (14-272)||(30405518-30405776)
chr7 (40-216)||(17881457-17881635)
chr7 (85-263)||(37144851-37145029)
chr7 (111-262)||(9755732-9755883)
chr7 (111-262)||(9800529-9800679)
chr7 (85-262)||(7361638-7361816)
chr7 (20-211)||(24596942-24597135)
chr7 (14-180)||(3268898-3269066)
chr7 (38-180)||(1074466-1074611)
chr7 (151-263)||(8606001-8606112)
chr7 (14-180)||(1255145-1255314)
chr7 (85-227)||(7372571-7372710)
chr7 (90-179)||(22067817-22067906)
chr7 (14-262)||(4977752-4978004)
chr7 (14-178)||(20461580-20461746)
chr7 (199-257)||(21543071-21543129)
chr7 (90-176)||(21545810-21545896)
chr7 (37-131)||(8308987-8309083)
chr7 (47-176)||(18496583-18496714)
chr7 (14-177)||(7142115-7142281)
chr7 (54-169)||(5312758-5312875)
chr7 (14-180)||(23124914-23125083)
chr7 (14-180)||(29544533-29544702)
chr7 (39-128)||(12358719-12358810)
chr7 (85-180)||(315199-315294)
chr7 (27-86)||(3487311-3487370)
chr7 (14-128)||(9761347-9761464)
chr7 (91-179)||(46054713-46054801)
[»] chr2 (27 HSPs)
chr2 (14-262)||(19540969-19541219)
chr2 (111-262)||(29647577-29647728)
chr2 (19-180)||(21849011-21849174)
chr2 (85-262)||(27917989-27918165)
chr2 (14-250)||(24047326-24047564)
chr2 (59-251)||(22388735-22388924)
chr2 (95-206)||(17415211-17415322)
chr2 (85-180)||(21843008-21843103)
chr2 (38-227)||(22510914-22511104)
chr2 (27-176)||(18236248-18236399)
chr2 (96-180)||(21844646-21844730)
chr2 (37-176)||(17240812-17240950)
chr2 (21-176)||(21505078-21505236)
chr2 (85-180)||(35031716-35031811)
chr2 (93-171)||(34063859-34063937)
chr2 (95-180)||(17152167-17152252)
chr2 (75-128)||(30705268-30705321)
chr2 (27-119)||(27417208-27417303)
chr2 (27-167)||(39730474-39730616)
chr2 (92-212)||(32276526-32276646)
chr2 (22-117)||(17415103-17415201)
chr2 (44-168)||(18818723-18818849)
chr2 (90-180)||(28278434-28278524)
chr2 (85-177)||(30998788-30998880)
chr2 (105-167)||(24187993-24188055)
chr2 (14-86)||(14921971-14922043)
chr2 (91-119)||(15829205-15829233)
[»] chr8 (24 HSPs)
chr8 (14-262)||(30543695-30543943)
chr8 (90-227)||(24584735-24584872)
chr8 (91-180)||(14977118-14977208)
chr8 (38-263)||(11437350-11437577)
chr8 (43-171)||(14424774-14424904)
chr8 (20-180)||(29291785-29291946)
chr8 (14-124)||(28074583-28074695)
chr8 (37-179)||(35135376-35135522)
chr8 (24-176)||(10867006-10867160)
chr8 (43-263)||(31436410-31436632)
chr8 (13-180)||(12956503-12956664)
chr8 (20-207)||(13583458-13583637)
chr8 (14-180)||(32239301-32239470)
chr8 (14-152)||(5153800-5153940)
chr8 (37-171)||(28260245-28260381)
chr8 (45-177)||(6888156-6888287)
chr8 (44-171)||(12774805-12774935)
chr8 (27-176)||(22894476-22894627)
chr8 (37-180)||(27097755-27097902)
chr8 (85-262)||(30851105-30851282)
chr8 (85-180)||(28901346-28901441)
chr8 (96-179)||(5570158-5570241)
chr8 (92-180)||(24120245-24120334)
chr8 (91-180)||(28902103-28902192)
[»] chr3 (27 HSPs)
chr3 (14-263)||(28422384-28422635)
chr3 (20-212)||(11474828-11475023)
chr3 (14-180)||(26297763-26297929)
chr3 (59-212)||(26387822-26387977)
chr3 (14-262)||(21829065-21829315)
chr3 (25-190)||(18474175-18474341)
chr3 (14-180)||(8402484-8402651)
chr3 (14-171)||(25919403-25919556)
chr3 (27-171)||(33577757-33577903)
chr3 (65-171)||(19545967-19546075)
chr3 (66-164)||(30493249-30493349)
chr3 (15-179)||(33914500-33914662)
chr3 (92-180)||(1475293-1475381)
chr3 (38-117)||(26797205-26797285)
chr3 (85-180)||(11521154-11521248)
chr3 (91-177)||(13911282-13911368)
chr3 (14-163)||(23908203-23908354)
chr3 (96-171)||(27374468-27374543)
chr3 (36-160)||(5632496-5632614)
chr3 (91-136)||(25188815-25188860)
chr3 (14-178)||(19219143-19219310)
chr3 (85-177)||(23007071-23007163)
chr3 (14-86)||(26418830-26418902)
chr3 (217-262)||(5632628-5632673)
chr3 (24-210)||(19285084-19285271)
chr3 (91-179)||(2729630-2729718)
chr3 (18-126)||(27415236-27415347)
[»] chr4 (28 HSPs)
chr4 (90-227)||(19601765-19601902)
chr4 (14-262)||(29437401-29437653)
chr4 (14-168)||(10576479-10576635)
chr4 (14-180)||(9288224-9288392)
chr4 (43-212)||(21167711-21167883)
chr4 (48-119)||(17187250-17187321)
chr4 (63-262)||(22119578-22119779)
chr4 (85-180)||(1676301-1676396)
chr4 (85-180)||(1682829-1682924)
chr4 (27-180)||(34864240-34864392)
chr4 (27-180)||(17339760-17339914)
chr4 (59-212)||(21077215-21077370)
chr4 (29-171)||(23353646-23353789)
chr4 (20-180)||(25315169-25315332)
chr4 (20-117)||(31859839-31859938)
chr4 (90-180)||(9782994-9783084)
chr4 (38-177)||(26159773-26159914)
chr4 (20-128)||(15192269-15192380)
chr4 (96-176)||(27302796-27302876)
chr4 (37-176)||(46647214-46647354)
chr4 (85-151)||(10320225-10320291)
chr4 (27-128)||(17026641-17026745)
chr4 (85-128)||(1673826-1673869)
chr4 (88-167)||(1695856-1695935)
chr4 (108-180)||(12111360-12111433)
chr4 (90-167)||(18444277-18444354)
chr4 (59-153)||(20044219-20044315)
chr4 (60-117)||(33519107-33519166)
[»] scaffold0065 (2 HSPs)
scaffold0065 (140-263)||(12033-12156)
scaffold0065 (14-110)||(12328-12427)
[»] chr5 (27 HSPs)
chr5 (85-263)||(23157794-23157975)
chr5 (28-262)||(20694572-20694808)
chr5 (1-208)||(19331497-19331705)
chr5 (14-180)||(26070488-26070656)
chr5 (20-180)||(24841767-24841930)
chr5 (85-177)||(18222510-18222602)
chr5 (75-212)||(20083448-20083586)
chr5 (14-118)||(11274262-11274369)
chr5 (13-177)||(7742801-7742967)
chr5 (54-177)||(19763865-19763988)
chr5 (21-180)||(24410869-24411030)
chr5 (85-174)||(25680616-25680705)
chr5 (85-177)||(16634063-16634155)
chr5 (96-180)||(17382052-17382136)
chr5 (37-171)||(17027550-17027687)
chr5 (139-262)||(22643924-22644047)
chr5 (85-180)||(24517368-24517463)
chr5 (94-168)||(24268581-24268655)
chr5 (94-168)||(24345210-24345284)
chr5 (14-180)||(25594624-25594793)
chr5 (14-128)||(18178166-18178284)
chr5 (49-117)||(25367671-25367741)
chr5 (85-179)||(15205658-15205752)
chr5 (85-179)||(16622673-16622767)
chr5 (193-259)||(25367555-25367621)
chr5 (91-180)||(12340026-12340115)
chr5 (85-153)||(11997900-11997968)
[»] scaffold0337 (1 HSPs)
scaffold0337 (140-256)||(1604-1720)
[»] chr6 (14 HSPs)
chr6 (140-256)||(24507645-24507761)
chr6 (91-171)||(17860460-17860540)
chr6 (43-128)||(9943111-9943198)
chr6 (59-180)||(26512755-26512878)
chr6 (59-180)||(26517871-26517994)
chr6 (38-171)||(16439482-16439616)
chr6 (36-180)||(14768223-14768369)
chr6 (14-117)||(26499779-26499884)
chr6 (21-180)||(32930412-32930573)
chr6 (14-116)||(9396539-9396642)
chr6 (95-180)||(13759467-13759552)
chr6 (14-128)||(12972317-12972433)
chr6 (91-176)||(20495806-20495890)
chr6 (44-117)||(22559176-22559250)
[»] scaffold0185 (1 HSPs)
scaffold0185 (23-180)||(1457-1616)
[»] chr1 (27 HSPs)
chr1 (14-171)||(26102080-26102239)
chr1 (14-262)||(52271177-52271426)
chr1 (93-180)||(23223425-23223513)
chr1 (14-177)||(15298802-15298967)
chr1 (27-212)||(18795163-18795350)
chr1 (14-171)||(19257736-19257895)
chr1 (14-170)||(25727841-25728000)
chr1 (14-170)||(25736249-25736408)
chr1 (59-247)||(26854297-26854485)
chr1 (20-212)||(25126462-25126656)
chr1 (90-176)||(19884190-19884276)
chr1 (54-180)||(30675498-30675627)
chr1 (37-223)||(21548619-21548807)
chr1 (36-180)||(25494442-25494580)
chr1 (43-180)||(26657490-26657630)
chr1 (15-164)||(27461114-27461266)
chr1 (14-171)||(11769926-11770086)
chr1 (22-171)||(25730511-25730663)
chr1 (91-180)||(50047195-50047284)
chr1 (28-128)||(31313618-31313720)
chr1 (85-180)||(8247663-8247758)
chr1 (98-180)||(12810336-12810418)
chr1 (90-176)||(18391100-18391186)
chr1 (74-168)||(15416966-15417062)
chr1 (91-169)||(12423926-12424004)
chr1 (89-131)||(23519768-23519810)
chr1 (130-210)||(21550930-21551010)
[»] scaffold0043 (1 HSPs)
scaffold0043 (14-251)||(58688-58928)
[»] scaffold0190 (1 HSPs)
scaffold0190 (38-262)||(11654-11880)
[»] scaffold0171 (2 HSPs)
scaffold0171 (85-166)||(21425-21506)
scaffold0171 (108-177)||(6213-6282)
[»] scaffold0188 (1 HSPs)
scaffold0188 (20-131)||(26893-27007)
[»] scaffold0011 (1 HSPs)
scaffold0011 (24-190)||(228128-228295)
[»] scaffold1026 (1 HSPs)
scaffold1026 (96-177)||(1850-1931)
[»] scaffold0386 (1 HSPs)
scaffold0386 (27-124)||(13016-13116)
[»] scaffold1149 (1 HSPs)
scaffold1149 (140-257)||(1723-1839)


Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 4828984 - 4828653
Alignment:
Q  1 cattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttg 100  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828984 cattgaattttcgtcttcttatcctcgatccgtcgtgtaatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttg 4828885  T
Q  101 catgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828884 catgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttcc 4828785  T
Q  201 ttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaagcaccaacatcaaactttgagttaaaattcaacaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828784 ttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaagcaccaacatcaaactttgagttaaaattcaacaatt 4828685  T
Q  301 ctccacttttattctaaatttaaggtgatgtc 332  Q
    ||||||||||||||||||||||||||||||||    
T  4828684 ctccacttttattctaaatttaaggtgatgtc 4828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 30405776 - 30405518
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||   |||| |||| ||||  |||| |||||||||||||| |||||| ||||||  || ||||||||||||||| ||||||    
T  30405776 tcttcatatcctcgatccttcacatgatttcttattttgccgatttacatgatttctcactaaaaa-actcaaaacacctatggagttgcatggtttagg 30405678  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaa 211  Q
    ||||| || ||||||||||| || | |||||| ||||||||||||||||||||||||| | |||||||| ||| |||||  ||||| |||||||||||||    
T  30405677 ataaa-gtgaattacaatgagtcaaataaaaacaatacaaaaagttcctcaaaccattaacaactcctctaattgacttctaatttaccttcaaatgcaa 30405579  T
Q  212 ataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaagcaccaaca 272  Q
    | |||||||||| ||| | ||| |||||||||||||||||||||||||||| | |||||||    
T  30405578 agaattacactagaaacatagcaaaaaatatcatatgttattccatcatcatgtaccaaca 30405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 216
Target Start/End: Original strand, 17881457 - 17881635
Alignment:
Q  40 atatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgat 137  Q
    ||||||||||||| |||| ||||||| |||||| ||||||||||||| |   ||||  |||||||||||||| ||||||| ||||||||||||| ||||     
T  17881457 atatcttgtttttccgatttacatgacttctcactaaaaagactcaaaatacctattaagttgcatgatttatgataaaattaaattacaatgattcgaa 17881556  T
Q  138 taaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataat 216  Q
    | |||| |||||||||||||||| ||| |||||| |||||||  ||  |||||  ||||| ||||||||||||||||||    
T  17881557 tgaaaataatacaaaaagttcctaaaatcattgacaactcctttaaatgacttctaatttgccttcaaatgcaaataat 17881635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 85 - 263
Target Start/End: Complemental strand, 37145029 - 37144851
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 184  Q
    |||| ||| |||||||||||||||||||||||| || ||||||| || | || | |||| |||||||||||||  ||||| || ||| |||||||| |||    
T  37145029 aacacctacggagttgcatgatttaggataaaaatatattacaacgacttgaatgaaaataatacaaaaagtttttcaaaacaatgacaactcctctaat 37144930  T
Q  185 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaa 263  Q
     |||||  ||||| ||||||||| |||| ||||| |||||||| | || |||| | |||||||||||||||||||||||    
T  37144929 tgacttcaaatttgccttcaaatccaaagaattatactaaaaacatagttaaatacatcatatgttattccatcatcaa 37144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 9755883 - 9755732
Alignment:
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    |||||||||||||||||| || |||| | |||| ||||||||| ||||||||||| | ||| || ||||| ||| |||||  ||||| ||||||||||||    
T  9755883 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataatttgccttcaaatgca 9755784  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    |  || || |||||||| | ||||| ||||||||||||||||| ||||||||    
T  9755783 agaaaatatactaaaaacatagctacaaatatcatatgttatttcatcatca 9755732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 9800679 - 9800529
Alignment:
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    |||||||||||||||||| || |||| | |||| ||||||||| ||||||||||| | ||| || ||||| ||| |||||  ||||||||||||||||||    
T  9800679 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataattttccttcaaatgca 9800580  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    |  || || ||||||||  | |||| ||||||||||||||||||||||||||    
T  9800579 agaaaatatactaaaaa-catgctacaaatatcatatgttattccatcatca 9800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 7361638 - 7361816
Alignment:
Q  85 aacaactatggagttgcatgatttag-gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaa 183  Q
    |||| ||| ||||||||||||||||| ||||||||| | ||||||||| |||| | |||| | |||||||||||| || ||||| ||| |||||||| ||    
T  7361638 aacatctacggagttgcatgatttagtgataaaagtgagttacaatgactcgaatgaaaacattacaaaaagttcatcgaaccaatgacaactcctctaa 7361737  T
Q  184 tagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    |||| ||| ||||| |||| ||||||||| |||||||||| ||| | || || ||| |||||||||  || ||||||||    
T  7361738 tagatttttaatttgccttaaaatgcaaagaattacactagaaacatagttagaaagatcatatgtattttcatcatca 7361816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 24596942 - 24597135
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaa 117  Q
    ||||||||||| | |  ||||| |||||||||  |||| |||| ||||||||| |||||||||| ||  || ||| ||||||||||||||||||||||||    
T  24596942 tatcctcgatcttccacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaacacctacggagttgcatgatttaggataaaa 24597041  T
Q  118 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaa 211  Q
     | |||||||| || ||   | |||| ||| |||||| | | |||||||||||| ||||| || ||| |||||  |||||||||||||||||||    
T  24597042 ttgaattacaacgactcagatcaaaacaatgcaaaaactccatcaaaccattgacaactcttctaattgacttctaattttccttcaaatgcaa 24597135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 3268898 - 3269066
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagact--caacaactatggagttgcatgatttagg 111  Q
    ||||| ||| || |||||||| ||||||||||||||||  |||| |||||||||||||| ||||||||||   ||||  || | ||||||||||||||||    
T  3268898 tcttcatatacttgatccttcatgtgatatcttgttttgccgatttacatgatttctcactaaaaagacttaaaacacatacgaagttgcatgatttagg 3268997  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||| ||||||||  | || |   |||| ||||||||| ||| ||||||||| ||| ||||||||    
T  3268998 ataaaagtgaattacaacaactcaaacgaaaacaatacaaaatgttactcaaaccaatgacaactcctc 3269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 1074611 - 1074466
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaa-gactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatc 134  Q
    |||| ||||| |||| | || |||||||||||||| |||||| ||| |||  ||  |||||||||| || |||||||||||||| |||||||||||||||    
T  1074611 tgatgtcttgcttttccaatttacatgatttctcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaattacaatgaatc 1074512  T
Q  135 gattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    || | |||| |||||||   ||||||||||||||||| ||||||||    
T  1074511 gaatgaaaataatacaattggttcctcaaaccattgacaactcctc 1074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 8606112 - 8606001
Alignment:
Q  151 aaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgtt 250  Q
    |||||||||||||||||||||||||||||| ||| || ||  |||||||||| ||| ||||||||    |||||||| | |||| |||| ||||||||||    
T  8606112 aaaagttcctcaaaccattgaaaactcctctaattgatttctaattttcctttaaacgcaaataaaataactaaaaacatagct-aaaacatcatatgtt 8606014  T
Q  251 attccatcatcaa 263  Q
    |||||||||||||    
T  8606013 attccatcatcaa 8606001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 1255145 - 1255314
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| |||||| |||||||| |||||| | ||| ||| | ||| || || |||| |||||| |||| ||||||  || ||||| |||||||||||||||    
T  1255145 tcttcgtatccttgatccttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaacacctatgaagttgcatgatttag 1255244  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||| | ||||||||||| |||| | |||| |||||||    |||||||||||||||| ||||||||    
T  1255245 gataaaaatgaattacaatgactcgagtgaaaacaatacaatttattcctcaaaccattgacaactcctc 1255314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 7372571 - 7372710
Alignment:
Q  85 aacaactatggagttgcatgatttag-gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaa 183  Q
    |||| ||||| ||||||||||||| | ||||||| | |||||||| || |||| | |||| |||||||||||||| |||||||| ||| |||||||| ||    
T  7372571 aacacctatgaagttgcatgatttcgtgataaaattgaattacaacgactcgaatgaaaacaatacaaaaagttcatcaaaccaatgacaactcctctaa 7372670  T
Q  184 tagactttcaattttccttcaaatgcaaataattacactaaaaa 227  Q
    |    ||  ||||| |||||||||||||| ||||||||||||||    
T  7372671 t----ttctaatttaccttcaaatgcaaagaattacactaaaaa 7372710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 22067817 - 22067906
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    ||||||||||||||||| |||||||||| | ||||||||||| |||| | |||| ||||||  | ||||||||||||||||| |||||||    
T  22067817 ctatggagttgcatgatctaggataaaattgaattacaatgactcgagtgaaaacaatacattatgttcctcaaaccattgacaactcct 22067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 4977752 - 4978004
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaaga---ctcaacaactatggagttgcatgatttag 110  Q
    ||||| ||||||||||||||| |||||| ||||| ||| |  || |||||||||||||| || |||     | ||||  ||||| |||||||| ||||||    
T  4977752 tcttcatatcctcgatccttcatgtgatgtcttgatttgtatatttacatgatttctcactataaaccgctcacaacctctatgaagttgcataatttag 4977851  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||||| |||||||| || | || | | || |||||||||| ||| |||||||| ||| |||||||  ||| |||||  ||||| |||| |||||||    
T  4977852 gataaaagtgaattacaacgacttgaatgataaaaatacaaaaaattcttcaaaccaatgacaactcctttaattgacttataatttacctttaaatgca 4977951  T
Q  211 --aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
      || || || ||| |||| | ||||||||||||||| || |||||| ||||||    
T  4977952 agaaaaaatatact-aaaacatagctaaaaatatcatgtggtattccgtcatca 4978004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 20461580 - 20461746
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| |||||| ||||||||   |||| |||| ||||  |||| |||||||||||||| |||||||||||  |||| ||||   ||||| |||||||||    
T  20461580 tcttcatatccttgatccttcacttgatgtcttattttgccgatttacatgatttctcactaaaaagactcgaaacacctatcatgttgcgtgatttagg 20461679  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcc 178  Q
    || ||| | | |||||| || |||| | |||| ||||||||  ||||||||||||||||| ||||||    
T  20461680 atgaaattgagttacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcc 20461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 21543071 - 21543129
Alignment:
Q  199 ccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccat 257  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||||||||||||||    
T  21543071 ccttcaaatgaaaataattacactaaaaacatagctaaaaacatcatatgttattccat 21543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 21545810 - 21545896
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    ||||| |||||||||||||||||||||||| | |||||| || |||| | |||| ||||||| | ||||||||||||||||| ||||    
T  21545810 ctatgtagttgcatgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaact 21545896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 8308987 - 8309083
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatga 131  Q
    ||||| |||||||||   ||| |||||||||||| | |||||||||||||  ||  ||||||||||||||||||||||||||| ||||| |||||||    
T  8308987 gtgatgtcttgttttgctgatttacatgatttcttactaaaaagactcaaaacatgtatggagttgcatgatttaggataaaactaaatcacaatga 8309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 18496714 - 18496583
Alignment:
Q  47 gttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaag 144  Q
    |||||| |||| |||||||| |||||  ||| || |||||  || ||||| ||| |||||||||||||||||| | ||||||||||| |||| | ||||     
T  18496714 gtttttccgatttacatgatatctcaccaaataggctcaaaacacctatgaagtcgcatgatttaggataaaaatgaattacaatgattcgaatgaaaac 18496615  T
Q  145 aatacaaaaagttcctcaaaccattgaaaact 176  Q
    ||| |||| |||||||||||| ||||| ||||    
T  18496614 aattcaaatagttcctcaaacaattgacaact 18496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 7142281 - 7142115
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttag 110  Q
    ||||| |||| | ||||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| |||   |||| ||||||||||||||||| | |    
T  7142281 tcttcatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatcttg 7142182  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    ||||||||| |||||||| || |||| | |||  |||| || | |||||| |||||||||| |||||    
T  7142181 gataaaagtgaattacaacgactcgagtgaaagcaataaaatatgttccttaaaccattgacaactc 7142115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 5312758 - 5312875
Alignment:
Q  54 cgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaa 151  Q
    |||| |||||||||| ||| |||||||||||||  || ||||||||||||||| | || ||||||||| |||||||| || || | | |||| |||||||    
T  5312758 cgatttacatgatttatcactaaaaagactcaaaacacctatggagttgcatgctataagataaaagtgaattacaacgactcaaatgaaaacaatacaa 5312857  T
Q  152 aaagttcctcaaaccatt 169  Q
    | ||||||| | ||||||    
T  5312858 atagttccttagaccatt 5312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 23125083 - 23124914
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttag 110  Q
    ||||| |||||||||||||||   |||| ||||| ||  ||||| |||||||||||||| || |||| ||||  |||| |||| |||||| ||||||| |    
T  23125083 tcttcatatcctcgatccttcacatgatgtcttgattggtcgatttacatgatttctcactagaaaacactcaaaacacctatagagttgtatgattttg 23124984  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||| || |||||||| || |||| | |||| ||||||| | |||||||| |||| | | ||||||||    
T  23124983 gataaatgtgaattacaacgactcgagtgaaaacaatacaatatgttcctcagaccactaacaactcctc 23124914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 29544702 - 29544533
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaag-actcaa--caactatggagttgcatgatttag 110  Q
    ||||| |||| | |||||||| |||||| ||||| ||| ||||| ||||||||| || | ||||||  ||||||  ||  |||||| |||||  ||||||    
T  29544702 tcttcatatctttgatccttcatgtgatgtcttggtttgtcgatttacatgattccttactaaaaaacactcaaaacacttatggaattgcacaatttag 29544603  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    || |||||| |||||||| || |||| | |||| ||||||| | ||||||||||| ||||| ||||||||    
T  29544602 gagaaaagtgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaactattgacaactcctc 29544533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 12358719 - 12358810
Alignment:
Q  39 gatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaa 128  Q
    ||||| ||| |||| |||| || || |||||||| |||||||||||||  || ||||| ||||| |||||||||||||||| | ||||||||    
T  12358719 gatattttgcttttccgatttatattatttctcactaaaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaa 12358810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 315294 - 315199
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||||||||||||||||| |||||||||| | ||| ||||| | |||| | | || ||||||| |  ||| |||||||||||| ||||||||    
T  315294 aacacctatggagttgcatgatctaggataaaactgaataacaataactcgagtgacaataatacaatatattcttcaaaccattgacaactcctc 315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 3487311 - 3487370
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa 86  Q
    |||||||| | |||| |||||||||  ||||  |||||||||||||||||||||||||||    
T  3487311 gatccttcatttgatgtcttgttttgccgattcacatgatttctcattaaaaagactcaa 3487370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 9761347 - 9761464
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctca---ttaaaaagactcaacaactatggagttgcatgatttag 110  Q
    ||||| |||||| ||||||||  ||||| ||||| ||| ||||| |||||||||| |||   |||||||  |  |||| ||||||| |||||| || |||    
T  9761347 tcttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatctag 9761446  T
Q  111 gataaaagtaaattacaa 128  Q
    ||||||||| ||||||||    
T  9761447 gataaaagtgaattacaa 9761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 46054801 - 46054713
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    |||| ||||||||||||||  ||||||||||||||||| || | || | |||| |||| |||  |||||||||| || ||| |||||||    
T  46054801 tatgaagttgcatgatttattataaaagtaaattacaacgacttgaattaaaacaatataaattgttcctcaaatcaatgacaactcct 46054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 19541219 - 19540969
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||   |||| |||| ||||  |||| |||||||||||||| || ||||||||||  || ||||||||||||||||||||||    
T  19541219 tcttcatatcctcgatccttcacttgatgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacctatggagttgcatgatttagg 19541120  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttc-aattttccttcaaatgca 210  Q
    |||||| | ||||||||||| |||||| |||  ||||||||||||||||||||||||| | ||||||| | ||| |  ||| ||||||||||||||||||    
T  19541119 ataaaactgaattacaatgactcgattgaaataaatacaaaaagttcctcaaaccattaacaactcct-atatataaattctaattttccttcaaatgca 19541021  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    || ||    |||||||| | ||  |||||| ||||||| | |||||||||||    
T  19541020 aagaaaataactaaaaacataggcaaaaatctcatatgatgttccatcatca 19540969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 111 - 262
Target Start/End: Original strand, 29647577 - 29647728
Alignment:
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||||| |||||||| || || | | |||| |||| ||||||||||||||| || ||| |||| ||| ||| |||||  ||||| ||||||||||||    
T  29647577 gataaaagtgaattacaacgactcaaatgaaaacaatataaaaagttcctcaaatcaatgacaactactctaattgacttctaatttgccttcaaatgca 29647676  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    |||||||||||||| || | ||||||||| ||||||||||||||||||||||    
T  29647677 aataattacactaacaacatagctaaaaacatcatatgttattccatcatca 29647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 21849011 - 21849174
Alignment:
Q  19 ttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaa 116  Q
    ||||||| |||||||| |||||| ||||||| || |||| ||||| |||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  21849011 ttatccttgatccttcatgtgatgtcttgttcttccgatttacattatttctcactaaaaagactcaaaaatcctatggagttgcatgatttatgataaa 21849110  T
Q  117 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga-aaactcctc 180  Q
    | | ||||||||||| || |   |||| ||||||||| ||||||||||||||||| |||||||||    
T  21849111 actgaattacaatgactc-aaagaaaacaatacaaaatgttcctcaaaccattgacaaactcctc 21849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 27917989 - 27918165
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 184  Q
    |||| ||||||||||||||||||||| |||||||| |||||||| || || | | |||| |||||  || ||||||||||||| ||| |||||||  | |    
T  27917989 aacacctatggagttgcatgatttagtataaaagtgaattacaacgactcaaatgaaaacaatacccaacgttcctcaaaccaatgacaactcctatagt 27918088  T
Q  185 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
     || ||  ||||| |||||||||||||| ||||||| | |||| | ||||||||||||||||||||||||||||||||    
T  27918089 tgaattctaatttgccttcaaatgcaaagaattaca-ttaaaacatagctaaaaatatcatatgttattccatcatca 27918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24047564 - 24047326
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttagg 111  Q
    ||||| |||||| |||||||| || ||| |||||||||  |||| |  | ||||||||| ||||| ||| ||| |   |||||||||||||| |||||||    
T  24047564 tcttcatatccttgatccttcatgggatgtcttgttttgccgatttgtaggatttctcactaaaatgacccaaaatgcctatggagttgcataatttagg 24047465  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc-aaatagactttcaattttccttcaaatgca 210  Q
    |||||||| ||||||||||| |||| | |||| ||||||||| |||||| |||||||||| || | ||| ||||| || |   |||||||||||||||||    
T  24047464 ataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttccttaaaccattgacaatttctctaaata-acctcttattttccttcaaatgca 24047366  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgtt 250  Q
    |||||    |||||||| | |||  |||||||||||||||    
T  24047365 aataaaataactaaaaacatagcctaaaatatcatatgtt 24047326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 251
Target Start/End: Original strand, 22388735 - 22388924
Alignment:
Q  59 tacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttc 158  Q
    |||||||||||||| | ||||||||||| ||  ||| |||||||||||| ||||||||| |  |||||||||| || | | |||| |||| |||||||||    
T  22388735 tacatgatttctcactgaaaagactcaaaaa--atgaagttgcatgattcaggataaaactggattacaatgactcaaatgaaaacaata-aaaaagttc 22388831  T
Q  159 ctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgtta 251  Q
    ||||||  ||||| |||||||| ||| |||||  ||||| |||||||||||||| ||     ||||||| | ||||||||| |||||||||||    
T  22388832 ctcaaattattgacaactcctctaattgacttctaatttgccttcaaatgcaaagaaaatatctaaaaacatagctaaaaacatcatatgtta 22388924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 17415211 - 17415322
Alignment:
Q  95 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaa 194  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||| | |||| |||||||||| |||||||| ||||||| |||||||| ||  |||||  ||    
T  17415211 gagttgcattatttacgataaaactaaattacaatcaatcgaatgaaaacaatacaaaaatttcctcaacccattgacaactcctctaaatgacttctaa 17415310  T
Q  195 ttttccttcaaa 206  Q
    ||||||||||||    
T  17415311 ttttccttcaaa 17415322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 21843008 - 21843103
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||| | |||||| |||||||||  ||||||||    
T  21843008 aacacctatagagttgcatgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcctaaaaccattggcaactcctc 21843103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 22511104 - 22510914
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaaca-actatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||| ||||| ||||||||| |||||||||||||| || |||| | |||| | |||||  |||||||  |||||||||||| ||||||||||  || |||    
T  22511104 tgatgtcttgatttttcgatttacatgatttctcactacaaaacaatcaaaacactatatagttgcacaatttaggataaacgtaaattacagcgactcg 22511005  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaa 227  Q
    | | |||| ||||||||| |||||| |||||| || || |||||| |||  ||||  ||||| |||||||||||||| ||||||||||||||    
T  22511004 aatgaaaaaaatacaaaa-gttcctaaaaccaatggaagctcctctaatttacttataatttgccttcaaatgcaaaaaattacactaaaaa 22510914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 18236248 - 18236399
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaatt 124  Q
    |||||||| |||||| |||||||||  |||  |||||||||||||| ||||||||||||| | || ||||||||||||||||||| ||||||||| ||||    
T  18236248 gatccttcatgtgatgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgatttaagataaaagtgaatt 18236347  T
Q  125 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    | ||  | |||| | |||| |||| |||  ||| ||||||||||||| ||||    
T  18236348 ataacaactcgaatgaaaacaatataaattgtttctcaaaccattgacaact 18236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 21844646 - 21844730
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||||||||||| ||||||||||||||| |||| | |||| |||| || | |||||| |||||||||| ||||||||    
T  21844646 agttgcatgatttaggataagagtaaattacaatgactcgaatgaaaacaatataacatgttcctaaaaccattgacaactcctc 21844730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 17240812 - 17240950
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcga 136  Q
    ||||| |||||||||  | || || ||||||| ||| |||||| |||||||| ||||| ||||||||||||||| |||||| |||||||| | || ||||    
T  17240812 gtgatgtcttgttttgccaatttatatgatttttcactaaaaacactcaacacctatgaagttgcatgatttagaataaaactaaattacgacgactcga 17240911  T
Q  137 ttaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
     | |||| |||| |||||| ||||||||| ||||| ||||    
T  17240912 atgaaaacaatagaaaaag-tcctcaaactattgacaact 17240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 21505078 - 21505236
Alignment:
Q  21 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaa 117  Q
    ||||| |||| ||| |||||| ||||  ||| ||||| ||||||||| |||| || |||| ||||||  || ||| | ||||||||||||||||||||||    
T  21505078 atccttgatctttcatgtgatgtcttaatttatcgatttacatgattcctcactacaaaacactcaaaacatctaagaagttgcatgatttaggataaaa 21505177  T
Q  118 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    |||||||| || || |||| | |||| ||||||| | | ||||||||||||||| ||||    
T  21505178 gtaaattataaagactcgagtgaaaacaatacaatatgctcctcaaaccattgacaact 21505236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 35031811 - 35031716
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||||||| ||||||||| |||||||||||||| |||||| || |||| | |||| ||||||| | ||||||||||||||| | ||||||||    
T  35031811 aacacctatggaattgcatgatctaggataaaagtaagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattaacaactcctc 35031716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 34063859 - 34063937
Alignment:
Q  93 tggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    ||||||||||||||||||||||| ||| ||||||||  | |||| | |||| ||||||||||||||| |||||||||||    
T  34063859 tggagttgcatgatttaggataatagtgaattacaacaactcgaatgaaaacaatacaaaaagttccacaaaccattga 34063937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 17152252 - 17152167
Alignment:
Q  95 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||||| ||| ||||||||| |||||||| || |||| | |||| |||||||||  |||||||||||||||| ||||||||    
T  17152252 gagttgcatgaattacgataaaagttaattacaacgactcgaatgaaaataatacaaaatattcctcaaaccattgacaactcctc 17152167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 30705321 - 30705268
Alignment:
Q  75 aaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaa 128  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30705321 aaaacgactcaacacctatgaagttgcatgatttaggataaaagtaaattacaa 30705268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 27417208 - 27417303
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttaggataaaagt 119  Q
    |||||||| |||||| ||||| ||| ||||| |||||||||||||| || |||| |||   |||| ||||||||||||||||||||||||||||||    
T  27417208 gatccttcatgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatttaggataaaagt 27417303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 39730616 - 39730474
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 124  Q
    |||||||| |||||| |||||||||   ||| || ||||||||||| |||||| ||||||  || ||   ||||||||||||||||||||||||| ||||    
T  39730616 gatccttcatgtgatgtcttgttttgctgatttatatgatttctcactaaaaatactcaaaacacctgcagagttgcatgatttaggataaaagtgaatt 39730517  T
Q  125 acaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 167  Q
    |||| || | || ||||||  ||| |||| |||||| ||||||    
T  39730516 acaacgacttgaataaaaactatagaaaatgttccttaaacca 39730474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 32276526 - 32276646
Alignment:
Q  92 atggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagacttt 191  Q
    ||||||||| ||||||||| |||||  | ||||||||||| |||| |||||| ||| ||||| |||| |||||||||||| | |||||  ||  ||| |     
T  32276526 atggagttgaatgatttagaataaacttcaattacaatgactcgaataaaaacaatgcaaaatgttcttcaaaccattgacatctcctttaaatgacctc 32276625  T
Q  192 caattttccttcaaatgcaaa 212  Q
      |||||||||||||||||||    
T  32276626 ttattttccttcaaatgcaaa 32276646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 17415103 - 17415201
Alignment:
Q  22 tcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatg-gagttgcatgatttaggataaaa 117  Q
    |||||||||||||  ||||| |||||||||  |||| |||| ||||||||| |||||||||||  |||| ||||| ||||||||| ||||| |||||||    
T  17415103 tcctcgatccttcacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagactcaaaacacctatgagagttgcattatttacgataaaa 17415201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 18818849 - 18818723
Alignment:
Q  44 cttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 141  Q
    ||||||||  |||| |||||||||||||| |||||||||| || |   ||||||| |||||||||||| ||||||| |||||| ||| || || | | ||    
T  18818849 cttgttttgccgatttacatgatttctcaataaaaagactgaaaacgtctatggacttgcatgatttatgataaaactaaatttcaacgactcaaatgaa 18818750  T
Q  142 aagaatacaaaaagttcctcaaaccat 168  Q
    || |||| |||| |||||| |||||||    
T  18818749 aacaatataaaatgttccttaaaccat 18818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 28278434 - 28278524
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||||||||||| |||||||||||| |||||||| || || | | |||| ||||||  | |||| |||||||||||| || |||||    
T  28278434 ctatggagttgcatgatctaggataaaagtgaattacaacgactcaagtgaaaataatacactatgttcttcaaaccattgagaaatcctc 28278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 30998880 - 30998788
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||| ||||||||||| ||||| |||||||||| | || ||||| || || | | |||| ||||||| | ||||||||||||||||| |||||    
T  30998880 aacacctatggagttgtatgatctaggataaaactgaagtacaacgactcaagtgaaaacaatacaatatgttcctcaaaccattgacaactc 30998788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 24188055 - 24187993
Alignment:
Q  105 atttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 167  Q
    ||||||||||||||| ||| ||||||| |||| | || | |||||||||||||||| ||||||    
T  24188055 atttaggataaaagtgaatcacaatgactcgaatgaatacaatacaaaaagttccttaaacca 24187993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 14921971 - 14922043
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa 86  Q
    ||||| |||||||||| ||||   |||| | |||||||| |||| ||||||||||||||  ||||||||||||    
T  14921971 tcttcatatcctcgattcttcacatgatgtattgtttttccgatttacatgatttctcacgaaaaagactcaa 14922043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 119
Target Start/End: Complemental strand, 15829233 - 15829205
Alignment:
Q  91 tatggagttgcatgatttaggataaaagt 119  Q
    |||||||||||||||||||||||||||||    
T  15829233 tatggagttgcatgatttaggataaaagt 15829205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 30543943 - 30543695
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| ||||||| ||||||| ||||||||||||||||  |||| ||||||||||||||  ||||||||||  |||| ||||  | ||||||||||||||    
T  30543943 tcttcatatcctcaatccttcatgtgatatcttgttttaccgatttacatgatttctcaccaaaaagactcaaaacacctatataattgcatgatttagg 30543844  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaa 211  Q
    |||||||| ||||||||  | || | | |||| ||||| |||||||| ||||| |||||| |||||||| |||  ||||| |||||  ||||||||||||    
T  30543843 ataaaagtgaattacaacaactcaaatgaaaacaatac-aaaagttcatcaaa-cattgagaactcctctaattaacttttaatttgtcttcaaatgcaa 30543746  T
Q  212 ataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    | ||  | |||||||| | |||||||||||||||| ||| |||||||||||    
T  30543745 aaaaaaatactaaaaacatagctaaaaatatcataagtttttccatcatca 30543695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 227
Target Start/End: Original strand, 24584735 - 24584872
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagact 189  Q
    |||| ||||||||||||||| ||||||| | ||||||||||| |||| | |||| |||||||||| |||||||||||  ||| |||||||| ||| ||||    
T  24584735 ctatagagttgcatgatttatgataaaaatgaattacaatgactcgaatgaaaacaatacaaaaaattcctcaaaccgatgacaactcctctaattgact 24584834  T
Q  190 ttcaattttccttcaaatgcaaataattacactaaaaa 227  Q
    |  ||||| ||||||||| |||| ||||| ||||||||    
T  24584835 tctaatttgccttcaaatacaaagaattatactaaaaa 24584872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 14977118 - 14977208
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcga-ttaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | ||||| ||||||| | ||||||||||||||||| ||||||||    
T  14977118 tatggagttgcatgatttaggataaaagtgaattacaatgactcgagtgaaaaacaatacaatatgttcctcaaaccattgacaactcctc 14977208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 263
Target Start/End: Complemental strand, 11437577 - 11437350
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||| |||||||||  |||| |||||||||||||| ||||||||||||| | || |||||||||||||||  || ||| ||| | ||||| || || |||    
T  11437577 tgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaatacatatggagttgcatgacctatgatgaaactgaattataacgactcg 11437478  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagcta 235  Q
    | | |||| || ||||||| ||| || |||||||||||||||||| ||| ||||| |||||| |||| |||| |||| ||    |||||||  | || ||    
T  11437477 aatgaaaacaacacaaaaatttcttcgaaccattgaaaactcctctaattgacttccaatttgcctttaaatacaaagaaaataactaaaagcataggta 11437378  T
Q  236 aaaatatcatatgttattccatcatcaa 263  Q
    |||| |||| ||||||||||| ||||||    
T  11437377 aaaacatcaaatgttattccaacatcaa 11437350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 14424774 - 14424904
Alignment:
Q  43 tcttgttttttcgatctacatgatttctcattaaaaagac--tcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 140  Q
    |||||||||  |||| |||||||||||||| |||||| ||    |||| |||||||||||||||||||||||||||| | |||||||| || |||| | |    
T  14424774 tcttgttttgccgatttacatgatttctcactaaaaaaacctaaaacacctatggagttgcatgatttaggataaaactgaattacaacgactcgaatga 14424873  T
Q  141 aaagaatacaaaaagttcctcaaaccattga 171  Q
    |||  ||| ||||||||||||||||||||||    
T  14424874 aaaccatataaaaagttcctcaaaccattga 14424904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29291946 - 29291785
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaa 117  Q
    |||||||||| ||||  |||||||||||||||  |||| |||||||||||| | ||||||||||||| | || |||  ||||||||||||||||||||||    
T  29291946 tatcctcgattcttcacgtgatatcttgttttgccgatttacatgatttcttactaaaaagactcaaaatacttataaagttgcatgatttaggataaaa 29291847  T
Q  118 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
     |  ||||||| || || | | |||| |||| ||||| |||||||||||||||| ||||||||    
T  29291846 ctgcattacaacgactcaaatgaaaa-aatataaaaaattcctcaaaccattgataactcctc 29291785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 28074695 - 28074583
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| |||||| |||||||| | |||| |||||||||    || |||||||||||||| |||||||||||  |||| ||||||||||||||||||||||    
T  28074695 tcttcatatccttgatccttcatttgatgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacctatggagttgcatgatttagg 28074596  T
Q  112 ataaaagtaaatt 124  Q
    |||||||| ||||    
T  28074595 ataaaagtgaatt 28074583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 35135376 - 35135522
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctc--attaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaa 132  Q
    ||||| ||||||||| ||||| ||| |||||||||  |  ||||||||||||  ||  | ||||||||||||||||||||||||| | |||||||||||     
T  35135376 gtgatgtcttgttttgtcgatttacctgatttctccaaaaaaaaagactcaaaacacatgtggagttgcatgatttaggataaaaatgaattacaatgac 35135475  T
Q  133 tcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    |||| |||||| ||||||||| || ||| ||||| |||| |||||||    
T  35135476 tcgagtaaaaacaatacaaaatgtacctaaaacctttgacaactcct 35135522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 10867160 - 10867006
Alignment:
Q  24 ctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaa 121  Q
    |||||||||||  ||| |||||||||||  |||  |||||||||||||| |||||||| ||||  || || ||||||||||||||||  ||||||| | |    
T  10867160 ctcgatccttcacgtggtatcttgttttgccgacttacatgatttctcactaaaaagattcaaagcacctttggagttgcatgatttgagataaaactga 10867061  T
Q  122 attacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    ||||||| || || | | |||| |||||||||  |||||||||||||||| ||||    
T  10867060 attacaacgactcaaatgaaaacaatacaaaatattcctcaaaccattgacaact 10867006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 263
Target Start/End: Complemental strand, 31436632 - 31436410
Alignment:
Q  43 tcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 140  Q
    ||||||||| | ||| |||||||||||||| |||||||| ||||  || ||||| |||||||||||||||||||||| ||||||||| ||| |||| | |    
T  31436632 tcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatttaggataaaactaaattacactgactcgaatga 31436533  T
Q  141 aaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaat 240  Q
    ||| |||| |     ||||||||| |||||| |||||||| ||   || |   |||| |||||||||||| ||||    |||||||||| ||   |||||    
T  31436532 aaaaaatatagtttattcctcaaatcattgacaactcctctaaattacatcttatttgccttcaaatgcagataaaataactaaaaatatagtataaaat 31436433  T
Q  241 atcatatgttattccatcatcaa 263  Q
    |||||||| || |||||||||||    
T  31436432 atcatatgatactccatcatcaa 31436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 12956664 - 12956503
Alignment:
Q  13 gtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttagga 112  Q
    |||||| |||||| ||| |||| |||||||||||| ||| ||||| || ||||||  ||| || |||      ||| |||| ||||| ||||||||||||    
T  12956664 gtcttcatatccttgattcttcatgtgatatcttggtttatcgatttatatgattcttcactacaaa------acacctatagagttacatgatttagga 12956571  T
Q  113 taaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||| |||||| |||| |||| | |||| ||||||| |  |||||||||||||||| ||||||||    
T  12956570 taaaagtgaattacgatgactcgagtgaaaacaatacaatattttcctcaaaccattgacaactcctc 12956503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 13583458 - 13583637
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaa 117  Q
    |||||||||||||||   |||| ||||||||| ||||| |||||||||||||| |||||||||||||  |||||          ||||||||||||||||    
T  13583458 tatcctcgatccttcacttgatgtcttgttttgtcgatttacatgatttctcactaaaaagactcaaaccaact----------atgatttaggataaaa 13583547  T
Q  118 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaat 207  Q
     | |||||||| || |||| |||||| |||| |||| |||||||| || ||| | |||||||| ||| |||||  ||||| |||| ||||    
T  13583548 ctgaattacaaagactcgaataaaaacaatagaaaaggttcctcagactattaacaactcctctaattgacttctaatttaccttaaaat 13583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 32239470 - 32239301
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| ||||||  ||||||| |||||| ||| | ||| || || |||| ||||||||| || |||| ||||||  ||  |||||||||||||||||||     
T  32239470 tcttcatatcctttatccttcatgtgatgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatggagttgcatgatttaa 32239371  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||| |||| ||| || || | |||||| ||||||| | ||| ||||||||||||| ||||||||    
T  32239370 gataaaagtgaattgcaacgactcaagtaaaaacaatacaatatgttactcaaaccattgacaactcctc 32239301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 5153940 - 5153800
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||   | || |||||||||  | || |||||||||||| | |||||||||||||  || |||| |||||| |||||||| |    
T  5153940 tcttcatatcctcgatccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacacctatcgagttgaatgatttaag 5153841  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaa 152  Q
    |||||| | ||||||||||| |||| | |||| ||||||||    
T  5153840 ataaaactgaattacaatgactcgaatgaaaataatacaaa 5153800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 28260245 - 28260381
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatc 134  Q
    ||||| |||||||||   ||| |||||||||||||| |||||||||||  |||| |||||||||  ||||||||||||||||  |||||||||| || |     
T  28260245 gtgatgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacctaaattacaacgacta 28260344  T
Q  135 gattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
     | | |||| ||||||||| ||||| | |||||||||    
T  28260345 aaatgaaaataatacaaaatgttccaccaaccattga 28260381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 6888156 - 6888287
Alignment:
Q  45 ttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaag 144  Q
    ||||||| | ||| |||||||||||||| ||||| ||||||| |    |||||||||||||||||||||| || | ||||||||||| || | | ||||     
T  6888156 ttgttttgttgatttacatgatttctcactaaaatgactcaaaacacctggagttgcatgatttaggatagaactgaattacaatgactcaaatgaaaa- 6888254  T
Q  145 aatacaaaaagttcctcaaaccattgaaaactc 177  Q
    ||||||||| ||| ||| ||||||||| |||||    
T  6888255 aatacaaaatgtttctctaaccattgacaactc 6888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 12774805 - 12774935
Alignment:
Q  44 cttgttttttcgatctacatgatttctcattaaaaag-actcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 140  Q
    ||||||||| |||| ||||| |||||| | ||||||| ||| ||  || ||||||  |||||||||||||||||||| ||||||||||||| || | |||    
T  12774805 cttgtttttccgatttacattatttcttactaaaaagtactaaaaacacctatggtattgcatgatttaggataaaactaaattacaatgactcaaataa 12774904  T
Q  141 aaagaatacaaaaagttcctcaaaccattga 171  Q
    ||| |||| |||| || | ||||||||||||    
T  12774905 aaataatataaaatgtacgtcaaaccattga 12774935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 22894476 - 22894627
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaa-aagactcaacaa--ctatggagttgcatgatttaggataaaagtaaat 123  Q
    |||||||| |||||||||||| |||| |||| |||||||||||||| || | || ||| || |   ||||||||||| ||||| || ||||||||| |||    
T  22894476 gatccttcatgtgatatcttgatttt-cgatttacatgatttctcactatagaacactaaaaatacctatggagttgaatgatctaagataaaagtgaat 22894574  T
Q  124 tacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
     ||||||| |||| |  ||||||||||| | || |||||||||||||| ||||    
T  22894575 cacaatgattcgagtgtaaagaatacaatatgtacctcaaaccattgacaact 22894627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 27097755 - 27097902
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaa--gactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaa 132  Q
    ||||| |||||||||  |||| |||||||||||||| ||||||  ||||   |||| ||||| |||||||||||||| ||||||| | |||||||| ||     
T  27097755 gtgatgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaacacctatgaagttgcatgatttatgataaaactgaattacaacgac 27097854  T
Q  133 tcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    || | | |||| ||| ||| | ||||||||||||||||| || |||||    
T  27097855 tcaaatgaaaacaatgcaacatgttcctcaaaccattgacaattcctc 27097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 30851105 - 30851282
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 184  Q
    |||| |||| ||||||||||||||||||||||  | |||||||| || |||| | |||| |||| ||||| |||||||||||||  | ||||| |  ||     
T  30851105 aacacctattgagttgcatgatttaggataaatctgaattacaacgattcgaatgaaaataatataaaaacttcctcaaaccatcaacaactcttataaa 30851204  T
Q  185 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
     |||||  |||||||||||||||  ||| ||    |||||||| | ||| ||||||||||||||   |||||||||||    
T  30851205 tgacttctaattttccttcaaatataaagaaaataactaaaaacatagccaaaaatatcatatgacgttccatcatca 30851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 28901346 - 28901441
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||| |||||||||| || ||||||||||   |||||||| || |||| | |||| ||||||| | ||||||||||||||||| ||||||||    
T  28901346 aacatctaaggagttgcattatctaggataaaaacgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctc 28901441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 5570158 - 5570241
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    ||||||||||| |||||||||||| ||||||||  | |||| | |||| ||||||| | ||||||||||  ||||| |||||||    
T  5570158 agttgcatgatataggataaaagtgaattacaacaactcgagtgaaaacaatacaatatgttcctcaaagtattgacaactcct 5570241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 24120334 - 24120245
Alignment:
Q  92 atggagttgcatgatttaggataaaagtaaattacaatgaa-tcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||| ||||||||||||||| || ||||| ||| | | | ||||| ||||||| |  ||||||||||| |||| ||||||||    
T  24120334 atggagttgcattatttaggataaaagttaactacaacgaattgggtgaaaaaaaatacaatatattcctcaaaccgttgacaactcctc 24120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 28902192 - 28902103
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||| |||| || | |||||||||||| |||||||| || |||| | |||| ||||||| | ||| ||||||||||| | ||||||||    
T  28902192 tatggatttgcgtggtataggataaaagtgaattacaacgactcgaatgaaaacaatacaatatgtttctcaaaccattaataactcctc 28902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 263
Target Start/End: Complemental strand, 28422635 - 28422384
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| ||||||| |||||||  ||||| | ||| ||| |||||||||||||||||||| || |||| | ||||  || | || ||||||||||||||||    
T  28422635 tcttcatatcctcaatccttcacgtgatgtattgatttgtcgatctacatgatttctcactacaaaacattcaaaacaccaattgagttgcatgatttag 28422536  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
     |||||||| ||||||||||| |||| | |||| |||||||||| |||||||||| |  || |||||||| ||| |||||  ||||||||||||||||||    
T  28422535 -ataaaagtgaattacaatgattcgaatgaaaacaatacaaaaaattcctcaaacaaacgacaactcctctaattgacttctaattttccttcaaatgca 28422437  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaa 263  Q
    || |||||||||||||  | ||  ||||| || ||||||||||| ||||||||    
T  28422436 aagaattacactaaaagcatagtaaaaaacataatatgttattctatcatcaa 28422384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 11475023 - 11474828
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaa-gactcaa--caactatggagttgcatgatttaggataaa 116  Q
    |||| |||||||||| |||||| |||||||||  |||| |||||||||||||| |||||| |||||||  ||  |||| |||||||||||||||||||||    
T  11475023 tatcttcgatccttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaa 11474924  T
Q  117 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    | | |||||||| || |||| | |||| |||||||||||||||||||||||||||  | ||||  ||  ||||| ||||||||||| || ||||||    
T  11474923 attgaattacaacgagtcgaatgaaaataatacaaaaagttcctcaaaccattgactagtcctttaaacgacttccaattttcctttaagtgcaaa 11474828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 26297929 - 26297763
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggat 113  Q
    ||||| |||||||||||||||   |||| |||||||||  |||| |||||||||| ||| |||| ||||||||||  |||| ||||||||||||||||||    
T  26297929 tcttcatatcctcgatccttcacttgatgtcttgttttgccgatttacatgatttatcactaaatagactcaacacatatgaagttgcatgatttaggat 26297830  T
Q  114 aaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| | |||||||| || |||| | |||| |||| |||||||| ||||||||||| | ||||||||    
T  26297829 aaaattgaattacaacgactcgaatgaaaacaatataaaaagtttctcaaaccattaacaactcctc 26297763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 26387822 - 26387977
Alignment:
Q  59 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 156  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| | |||||| | ||  | | | |||||||||||||| ||    
T  26387822 tacatgatttctcattaaaaagactcaaaacatctatggagttgcatgatttaggataaaacttaattactacgacacaaatgaaaagaatacaaaacgt 26387921  T
Q  157 tcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    | ||||||||||||| |||| ||| |||  ||||  ||||| ||||||||||||||    
T  26387922 ttctcaaaccattgacaactactctaatttacttctaatttgccttcaaatgcaaa 26387977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 21829065 - 21829315
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaact---atggagttgcatgatttag 110  Q
    ||||| |||||| ||| |||| |||||| ||||||||   |||| |||| ||||||||| ||| ||||| ||| ||||   ||| ||||| |||||||||    
T  21829065 tcttcatatccttgatacttcatgtgatgtcttgtttcgacgatttacaagatttctcactaacaagacccaa-aactcatatgaagttgtatgatttag 21829163  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||| | |||||||| || || | | |||| ||||||||| ||||||||||||||||| |||||||| ||  ||| |   |||||||||||||||||    
T  21829164 gataaaactgaattacaacgactcaaatgaaaataatacaaaatgttcctcaaaccattgacaactcctctaaatgacctcttattttccttcaaatgca 21829263  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    |||||    | |||||||| ||  |||||||||||||| ||| |||||||||    
T  21829264 aataaaataaataaaaatatagtcaaaaatatcatatgatatcccatcatca 21829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 18474341 - 18474175
Alignment:
Q  25 tcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaa 122  Q
    |||||||||| ||| || |||||| ||  |||| |||||||||||||| | |||||||||||  || |||||||||||||||||||||||||| ||| ||    
T  18474341 tcgatccttcatgtaatgtcttgtgttcccgatttacatgatttctcactgaaaagactcaaaacacctatggagttgcatgatttaggataacagtgaa 18474242  T
Q  123 ttacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactt 190  Q
    |||||||||||||| |  ||| |||||||  |||||||||||| ||||| || ||||| ||| |||||    
T  18474241 ttacaatgaatcgaat-gaaacaatacaatcagttcctcaaacgattgataaatcctctaattgactt 18474175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 8402484 - 8402651
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||   |||| ||||| | | ||||| |||| |||| |||  ||||| |||||||  || |||||||||||||||||||| |    
T  8402484 tcttcatatcctcgatccttcacttgatgtcttgatctatcgatttacacgattcctcgctaaaa-gactcaaaacacctatggagttgcatgatttaag 8402582  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||| | |||||||| || |||| | |||| ||||||||  ||||||||||||||||| ||||||||    
T  8402583 ataaaaatgaattacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcctc 8402651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 25919403 - 25919556
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggat 113  Q
    ||||| |||||| |||||||| |||||||||||| ||| ||||| ||||||||| |||| || |||      ||| ||||||||||||||||||||||||    
T  25919403 tcttcatatccttgatccttcatgtgatatcttggtttgtcgatttacatgattcctcactacaaa------acatctatggagttgcatgatttaggat 25919496  T
Q  114 aaaagtaaattacaatgaatcgattaaaaagaataca--aaaagttcctcaaaccattga 171  Q
    |||||| |||||| |||| || | |||||| || |||  | | |||||||||||||||||    
T  25919497 aaaagtgaattacgatgactcaagtaaaaacaacacaatatatgttcctcaaaccattga 25919556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 33577903 - 33577757
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 124  Q
    |||||||| |||||| ||||  |||  |||| |||||| ||| || ||||||||||||||  || | |||  |||||||||||||||||| || | ||||    
T  33577903 gatccttcatgtgatgtcttactttgccgatttacatgttttttctttaaaaagactcaaaccaccaatgaggttgcatgatttaggatataaatgaatt 33577804  T
Q  125 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    |||||||||| | |||||| ||||||||| |||| ||||||||||||    
T  33577803 acaatgaatcaaataaaaacaatacaaaacgttcttcaaaccattga 33577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 19545967 - 19546075
Alignment:
Q  65 atttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctca 162  Q
    ||||||||||||||| ||||||  |||||||  | || |||||| |||||||| ||| ||||||||||| || | |||||| ||||||| ||||||||||    
T  19545967 atttctcattaaaaaaactcaaaacaactataaaattacatgatataggataatagtgaattacaatgactcaaataaaaacaatacaataagttcctca 19546066  T
Q  163 aaccattga 171  Q
    |||||||||    
T  19546067 aaccattga 19546075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 30493249 - 30493349
Alignment:
Q  66 tttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaa 163  Q
    ||||||| |||||||||||||  || | ||||| |||||||||||||||||||| |||| ||||| || |||| | |||| ||||||||||||| |||||    
T  30493249 tttctcactaaaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaaacaatacaaaaagtttctcaa 30493348  T
Q  164 a 164  Q
    |    
T  30493349 a 30493349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 33914500 - 33914662
Alignment:
Q  15 cttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggat 113  Q
    |||| |||||| ||||||||  ||||| ||||| ||  ||||| |||||||||||||| || |||| |||||| ||| || |||||||||||||| ||||    
T  33914500 cttcatatccttgatccttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaa-aac-atagagttgcatgatttgggat 33914597  T
Q  114 aaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    ||  || |||||||| || |||| |||||| ||||||| | |||||||||||| |||| |||||||    
T  33914598 aac-gtgaattacaacgactcgagtaaaaacaatacaatatgttcctcaaaccgttgacaactcct 33914662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 1475293 - 1475381
Alignment:
Q  92 atggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||||||||| ||||||| || | |||||||| || |||| | |||| ||||||| |  |||||||||||||||||||||||||    
T  1475293 atggagttgcatgatctaggatataattgaattacaacgactcgagtgaaaataatacaatatattcctcaaaccattgaaaactcctc 1475381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 26797205 - 26797285
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaagactc-aacaactatggagttgcatgatttaggataaaa 117  Q
    |||| ||||||||| ||||| |||||||| ||||  ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  26797205 tgatgtcttgttttgtcgatttacatgatatctctctaaaaagactcaaacacctatgaagttgcatgatttaggataaaa 26797285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 11521248 - 11521154
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||| ||||||||| |||||||||| | |||||||   |||| | |||||| ||||||| | ||||||||||||||||| ||||||||    
T  11521248 aacaactatggacttgcatgatctaggataaaactgaattacaca-aatcaagtaaaaataatacaatatgttcctcaaaccattgacaactcctc 11521154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 13911368 - 13911282
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||| ||||||||||| |||||||||||| ||||||||||| || | | |||| ||||| | | ||||||||||||||||| |||||    
T  13911368 tatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaataccatatgttcctcaaaccattgacaactc 13911282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 23908203 - 23908354
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| ||| || |||||||| || ||| ||||| |||  || | |||||||||||||  || ||||||||||  || ||||| | |||||| |||| ||    
T  23908203 tcttcatattcttgatccttcatgagatgtcttgctttgccgctttacatgatttctccctagaaagactcaaagcacctatgaaattgcattattttgg 23908302  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaa 163  Q
    |||||||  |||||||| ||||||| | |||| ||||||||| |||||||||    
T  23908303 ataaaagggaattacaacgaatcgaatgaaaacaatacaaaatgttcctcaa 23908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 27374468 - 27374543
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    |||||||||||||||||||||| |  |||| ||||| |||| | |||| |||||||||| ||||| ||||||||||    
T  27374468 agttgcatgatttaggataaaactggattataatgactcgaatgaaaacaatacaaaaacttccttaaaccattga 27374543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 5632496 - 5632614
Alignment:
Q  36 tgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||||| ||||| ||| ||||| |||||||||||||| || |||      ||| |||||||||||||||||| | ||||||||| |||||||| |||||     
T  5632496 tgtgatgtcttggtttgtcgatttacatgatttctcactacaaa------acacctatggagttgcatgattcaagataaaagtgaattacaacgaatca 5632589  T
Q  136 attaaaaagaatacaaaaagttcct 160  Q
    | | |||| || ||||||| |||||    
T  5632590 aatgaaaacaacacaaaaacttcct 5632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 25188860 - 25188815
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcga 136  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  25188860 tatggagttgcatgatttatgataaaagtgaattacaatgattcga 25188815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 19219143 - 19219310
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| |||||| |||||||| |||||| ||||| |||   ||| ||||||||| |||| || |||| ||||||  ||  ||||| |||||||||||| |    
T  19219143 tcttcatatccttgatccttcatgtgatgtcttggtttgaagatttacatgattcctcactacaaaacactcaaaacatttatggtgttgcatgattttg 19219242  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcc 178  Q
    ||||||||| |||||||| || || | | |||  |||| || | | ||||||||||||||| ||||||    
T  19219243 gataaaagtgaattacaacgactctagtgaaagtaataaaatatgctcctcaaaccattgacaactcc 19219310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 23007071 - 23007163
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||| ||||||||||| |||||||||||||||||| | ||| ||||| ||||   |||| ||||||| |  ||||||||| |||||| |||||    
T  23007071 aacatctatggagttgtatgatttaggataaaagtgatttataatgactcgagggaaaacaatacaatatattcctcaaatcattgacaactc 23007163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 26418902 - 26418830
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa 86  Q
    ||||| |||||| |||||||| || ||| |||| ||||| |||| |||||||||||||| |||||||| ||||    
T  26418902 tcttcatatccttgatccttcatgcgatgtcttatttttccgatttacatgatttctcactaaaaagattcaa 26418830  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 5632628 - 5632673
Alignment:
Q  217 tacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  5632628 tacactaaaaacaaagttaaaaacatcatatgttatttcatcatca 5632673  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 19285271 - 19285084
Alignment:
Q  24 ctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaa 121  Q
    ||||||||| | | |||||||||||||||  ||| |||| ||| |||||  ||| ||||||  |||| ||| ||||||||  ||||||||| |||| | |    
T  19285271 ctcgatcctacatttgatatcttgtttttctgatttacacgatatctcacgaaagagactcgaaacacctaaggagttgctggatttaggacaaaattga 19285172  T
Q  122 attacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||| || |||| | |||| ||||| |||| || |||| || ||||| |||||||| ||  |||||  ||||| || |||||||||    
T  19285171 attacaacgactcgaatgaaaataatac-aaaattttctcatactattgacaactcctctaaatgacttctaatttaccctcaaatgca 19285084  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 2729630 - 2729718
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    |||| ||||||||| |||||||||||| | |||||||| || |||| | |||| |||| || | ||||||  ||||||||| |||||||    
T  2729630 tatgaagttgcatggtttaggataaaaatgaattacaaggactcgagtgaaaacaatataatatgttccttgaaccattgacaactcct 2729718  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 27415347 - 27415236
Alignment:
Q  18 cttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggata 114  Q
    |||||||| |||||||  |||||| ||||| ||  || || |||||||||||| | || |||| ||||||  || ||||| |||||||||||||| ||||    
T  27415347 cttatccttgatcctttatgtgatgtcttgattggtctatttacatgatttcttactacaaaacactcaaaacacctatgaagttgcatgatttacgata 27415248  T
Q  115 aaagtaaattac 126  Q
    ||||| ||||||    
T  27415247 aaagtgaattac 27415236  T

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Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 227
Target Start/End: Complemental strand, 19601902 - 19601765
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagact 189  Q
    |||||||||||||||||||||||||||||| ||||||||  | | || | |||| |||| |||||||||||||||||| ||| |||||||| ||| ||||    
T  19601902 ctatggagttgcatgatttaggataaaagtgaattacaacaatttgaatgaaaaaaatagaaaaagttcctcaaaccaatgacaactcctctaattgact 19601803  T
Q  190 ttcaattttccttcaaatgcaaataattacactaaaaa 227  Q
    || ||||| |||| ||||||||| ||||||||||||||    
T  19601802 tttaatttgcctttaaatgcaaagaattacactaaaaa 19601765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 29437653 - 29437401
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||  ||||| |||||| ||  |||| ||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  29437653 tcttcatatcctcgatccttcacgtgatgtcttgtcttgccgatttacatgatttctcattaaaaagactcaaaacagctatgaagttgcatgatttagg 29437554  T
Q  112 ataaaagtaaattacaatgaatcgatt--aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgc 209  Q
    |||||| | |||||| |  | |||| |  ||||| ||  |||||| |||||||||| ||||| ||||| || ||| || ||  ||||| ||||||||| |    
T  29437553 ataaaactgaattacgaatactcgaatgaaaaaaaaaatcaaaaaattcctcaaactattgacaactcatctaattgagttctaatttgccttcaaatac 29437454  T
Q  210 aaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    ||| ||    |||||||| ||  | ||||| |||||||||||||  |||||||    
T  29437453 aaagaaaataactaaaaacaacccaaaaaacatcatatgttattatatcatca 29437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 10576635 - 10576479
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||   |||| |||||||||| |||| ||||| |||||||| || ||||| ||||  || ||||| ||||| || ||||||     
T  10576635 tcttcatatcctcgatccttcacatgatgtcttgtttttccgatttacataatttctcactagaaagaatcaaaacacctatgaagttgtataatttaga 10576536  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 168  Q
    |||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||    
T  10576535 ataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcttcaaaccat 10576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 9288392 - 9288224
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaac--tatggagttgcatgatttagg 111  Q
    ||||| |||||| ||||||||   |||| |||||||||  |||| |||||||||||||| |||||||||| || ||   ||||||| | ||||||||| |    
T  9288392 tcttcatatccttgatccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactaaaaaaacatatggaggtacatgatttatg 9288293  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||| | ||||| ||||| || | | |||| |||||||   ||||||||||||||||||||||||||    
T  9288292 ataaaaatgaattataatgactcaaatgaaaacaatacaatttgttcctcaaaccattgaaaactcctc 9288224  T

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Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 21167883 - 21167711
Alignment:
Q  43 tcttgttttttc-gatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 139  Q
    |||||||||||| ||| |||||||||||||| ||||||| |||||  || ||||| |||| |||  |||||||||||||||||||||||  | |||| |     
T  21167883 tcttgttttttccgatttacatgatttctcactaaaaagtctcaaaacacctatgaagttacatattttaggataaaagtaaattacaacaactcgaatg 21167784  T
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    |||| ||||||||| |||||| ||| ||| || |||||||| ||  ||| |   |||||||||||||||||||    
T  21167783 aaaacaatacaaaatgttccttaaaacatggacaactcctctaaatgacgtcttattttccttcaaatgcaaa 21167711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 17187321 - 17187250
Alignment:
Q  48 ttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagt 119  Q
    |||| ||||| |||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  17187321 ttttgtcgatttacatgatttatcactaaaaagactcaacacctatgaagttgcatgatttaggataaaagt 17187250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 262
Target Start/End: Complemental strand, 22119779 - 22119578
Alignment:
Q  63 tgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcct 160  Q
    |||||||||| ||||||||||||| |   ||||| ||||||||||||| || ||||||||||||||||||| ||||   |||| | |||||   ||||||    
T  22119779 tgatttctcactaaaaagactcaaaatacctatgtagttgcatgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcct 22119680  T
Q  161 caaaccattgaaaactcct-caaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatca 259  Q
    ||||||||||| |||||||  ||||| ||||  ||||| |||||||||||||| ||    |||||||| | |||  ||||||||||||| | ||| ||||    
T  22119679 caaaccattgacaactcctataaata-acttctaatttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgttctatca 22119581  T
Q  260 tca 262  Q
    |||    
T  22119580 tca 22119578  T

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Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 1676301 - 1676396
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||||||||||||| |||||||||| | ||||||||  | |||| | |||| | ||||| | ||||||||||||||||| ||||||||    
T  1676301 aacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctc 1676396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 1682829 - 1682924
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||||||||||||| |||||||||| | ||||||||  | |||| | |||| | ||||| | ||||||||||||||||| ||||||||    
T  1682829 aacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctc 1682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 34864240 - 34864392
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggataaaagtaaatta 125  Q
    ||||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| |||||| |   |||||||| ||| ||||||||||||||| |||||    
T  34864240 gatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacatggagtttcataatttaggataaaagtgaatta 34864339  T
Q  126 caatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||  ||| | |||| ||||  | | ||||||||||||||||| ||||||||    
T  34864340 caatga--cgagtgaaaacaatatgatacgttcctcaaaccattgacaactcctc 34864392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 17339760 - 17339914
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 124  Q
    |||||||| |||||||||||| ||| ||||| |||| ||| ||||| |||||||  ||||  || ||||| | |||||||||||||||||||| | ||||    
T  17339760 gatccttcatgtgatatcttgctttgtcgat-tacacgatctctcactaaaaagcttcaaaacacctatgaaattgcatgatttaggataaaattgaatt 17339858  T
Q  125 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| || | || | ||||  |||||||| ||||||||| |||| || ||||||||    
T  17339859 acaaagactagaatgaaaaagatacaaaatgttcctcaatccatggataactcctc 17339914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 21077370 - 21077215
Alignment:
Q  59 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 156  Q
    |||||||||| ||| |||||||||  ||  || ||||||| ||  |||||||  ||||||| | || ||||| || |||| |||||| ||||||||| ||    
T  21077370 tacatgatttttcactaaaaagaccaaaaacacctatggaatttgatgatttgtgataaaattgaactacaacgactcgaataaaaataatacaaaaggt 21077271  T
Q  157 tcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    | ||||||||||||| |||||||| ||  |||||  ||||| ||||||||||||||    
T  21077270 ttctcaaaccattgacaactcctctaaatgacttctaatttgccttcaaatgcaaa 21077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 23353789 - 23353646
Alignment:
Q  29 tccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaaca-act-atggagttgcatgatttaggataaaagtaaattac 126  Q
    |||||| |||||| |||||||||  |||| |||||||||||||| ||||||||||||| | ||| ||| |  |||| ||||||  |||||| | ||||||    
T  23353789 tccttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaacactcatgaatgtgcacgattta-tataaaattgaattac 23353691  T
Q  127 aatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    || || |||| | |||| |||||||||||||||| ||||||||||    
T  23353690 aacgactcgaatgaaaacaatacaaaaagttccttaaaccattga 23353646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 25315169 - 25315332
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaag-actcaacaac--tatggagttgcatgatttaggataaa 116  Q
    |||||| |||||||| || ||| ||||| ||| ||||| ||||||||| |||| || |||  |||||| | |  |||||||||||||||| |||||||||    
T  25315169 tatccttgatccttcatgcgatgtcttgatttgtcgatttacatgattcctcactacaaattactcaaaacccatatggagttgcatgatctaggataaa 25315268  T
Q  117 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    | | |||||||| || || | | |||| ||||||| | |||||||||| |||||| ||||||||    
T  25315269 acttaattacaacgactcaagtgaaaacaatacaatatgttcctcaaagcattgacaactcctc 25315332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 31859839 - 31859938
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaa 117  Q
    |||||||||||||||   || | |||||||||   ||| |||||||||||||| |||||||||||||  || ||||| ||||||||||||||||||||||    
T  31859839 tatcctcgatccttcacctggtgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatgcagttgcatgatttaggataaaa 31859938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 9782994 - 9783084
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||||||||||| ||  |||||| | ||||||||||||| || | |||| ||||||| | ||||||||||| ||||| ||||||||    
T  9782994 ctatggagttgcatgatctaaaataaaactgaattacaatgaattgagtgaaaacaatacaatatgttcctcaaactattgacaactcctc 9783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 26159914 - 26159773
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||| |||||||||   |||||||||||||| ||| |||||||||||  ||||  |||| ||||| || |||||||| |||| |||||||||| || |||    
T  26159914 tgatgtcttgttttgctgatctacatgatttttcactaaaaagactcaaaacacatatgaagttggataatttaggacaaaactaaattacaacgactcg 26159815  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    | | |||| ||||||||| ||| || |||| ||||| |||||    
T  26159814 aatgaaaacaatacaaaatgtttcttaaactattgacaactc 26159773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 15192380 - 15192269
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaa 116  Q
    |||||| ||||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| ||||  |||| |||||||| |||| ||| |||||||||    
T  15192380 tatccttgatccttcacgtgatgtcttggtttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagctgcacgatctaggataaa 15192281  T
Q  117 agtaaattacaa 128  Q
    ||| ||||||||    
T  15192280 agtgaattacaa 15192269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 27302876 - 27302796
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    ||||||||||| ||| ||| || | ||||||||||| |||| | |||| ||||||||| ||||||||||||||||| ||||    
T  27302876 agttgcatgatctagtatataattgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaaccattgacaact 27302796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 46647354 - 46647214
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaaga-ctcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    ||||| |||||||||   ||| || ||||||||||  |||||| | |||||||  ||||||||||||||||||||||||||||| |||||||  || | |    
T  46647354 gtgatgtcttgttttgctgatttatatgatttctcgataaaaataactcaacacttatggagttgcatgatttaggataaaagtgaattacaccgactag 46647255  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    | | |||| |||||||||  ||| | |||||||||| ||||    
T  46647254 aatgaaaacaatacaaaatattcttgaaaccattgacaact 46647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 10320225 - 10320291
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaa 151  Q
    |||| ||||||||||||||| | |||||||||||| |||||||| || |||| | ||||||||||||    
T  10320225 aacacctatggagttgcatggtctaggataaaagtgaattacaacgactcgagtgaaaagaatacaa 10320291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 17026641 - 17026745
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaat 123  Q
    |||||||| |||||| ||||  ||| ||||| |||||||||| | | || |||| ||||||  || ||||||||||||||||| |||||||||||| |||    
T  17026641 gatccttcatgtgatgtcttaatttgtcgatttacatgatttatgactacaaaacactcaaaacacctatggagttgcatgatctaggataaaagtgaat 17026740  T
Q  124 tacaa 128  Q
    |||||    
T  17026741 tacaa 17026745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 1673826 - 1673869
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaa 128  Q
    |||||||||||||||||||||| |||||||||| | ||||||||    
T  1673826 aacaactatggagttgcatgatataggataaaattgaattacaa 1673869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 1695856 - 1695935
Alignment:
Q  88 aactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 167  Q
    ||||||||||||||||||| |||||||||| | |||||||| || || | |||||  ||||||| | |||||| ||||||    
T  1695856 aactatggagttgcatgatctaggataaaattgaattacaaagactcaaataaaaccaatacaatatgttcctgaaacca 1695935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 12111360 - 12111433
Alignment:
Q  108 taggataaaagtaaattacaatgaatcgatt-aaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||| |||||||| || |||  | ||||| ||||||| | ||||||||||||||||| ||||||||    
T  12111360 taggataaaagtgaattacaacgactcgtgtgaaaaaaaatacaatatgttcctcaaaccattgacaactcctc 12111433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 18444354 - 18444277
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 167  Q
    |||||||||||| ||||||||||||||| | |||||||  |  |||| | |||| | |||||| ||||||||||||||    
T  18444354 ctatggagttgcgtgatttaggataaaactgaattacagcggctcgaatgaaaacattacaaagagttcctcaaacca 18444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 20044315 - 20044219
Alignment:
Q  59 tacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 153  Q
    |||||||||| ||| ||||||||||||| | || ||||||||||||||||| ||||  ||| | ||||||||||| |||| | |||| |||| ||||    
T  20044315 tacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaatgactcgaatgaaaacaatataaaa 20044219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 33519166 - 33519107
Alignment:
Q  60 acatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 117  Q
    ||||||||||||| |||||||||||  |||| ||| | |||||||||||||| |||||||    
T  33519166 acatgatttctcactaaaaagactcaaaacacctacgaagttgcatgatttaagataaaa 33519107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 12156 - 12033
Alignment:
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 239  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  12156 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 12057  T
Q  240 tatcatatgttattccatcatcaa 263  Q
     ||||||||||| ||||| |||||    
T  12056 catcatatgttaatccattatcaa 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 12427 - 12328
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttag 110  Q
    ||||| |||| || |||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| ||||  |||| |||||||||||||||||||||    
T  12427 tcttcatatcgtcaatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagttgcatgatttag 12328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 85 - 263
Target Start/End: Original strand, 23157794 - 23157975
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 184  Q
    |||| ||||| | |||||||||||| ||||||||| |||||||| || || | | |||| ||||| ||||||||||||||||||||| |||||||| |||    
T  23157794 aacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaaccattgacaactcctctaat 23157893  T
Q  185 agactttcaattttccttcaaatgcaaataattacactaaaaataa---agctaaaaatatcatatgttattccatcatcaa 263  Q
     |||||  |||||||||||||||||||| ||    |||||||| ||   ||| ||||| |||||||||||||||||||||||    
T  23157894 tgacttctaattttccttcaaatgcaaagaaaataactaaaaaaaacatagcaaaaaacatcatatgttattccatcatcaa 23157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 262
Target Start/End: Complemental strand, 20694808 - 20694572
Alignment:
Q  28 atccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatta 125  Q
    ||||||| | |||| |||||||||  |||| |||||||||||| | |||||||||||||  ||  |||| ||||| || |||| |||||||| | |||||    
T  20694808 atccttcatatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 20694709  T
Q  126 caatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc-aaatagactttcaattttccttcaaatgcaaataattacactaa 224  Q
    |||||| |||| | |||| ||||||||||||||||||||||||||| || ||||| |||||  |||| |||||||||| ||||||||||||    |||||    
T  20694708 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata-tcttttaattttcctttaaatgcaaataaaataactaa 20694610  T
Q  225 aaataaagctaaaaatatcatatgttattccatcatca 262  Q
    ||| | |||| ||| ||||||||| | |||||| ||||    
T  20694609 aaacatagcttaaagtatcatatgatgttccattatca 20694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 19331705 - 19331497
Alignment:
Q  1 cattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgtttttt-cgatctacatgatttctcattaaaaagactcaacaactatggagtt 99  Q
    ||||||||||   ||||| |||||||||||||||   ||||   ||||||||  |||| ||||||||||||||  |||||||||||| |   ||||| ||    
T  19331705 cattgaatttcaatcttcatatcctcgatccttcacttgatgctttgtttttaacgatttacatgatttctcacaaaaaagactcaaaacacatggaatt 19331606  T
Q  100 gcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttc 199  Q
    |||||||||||||||||| |||||||||| || |||| | || | ||||||||||||| ||||||| ||||| |||||||| ||| || ||  |||||||    
T  19331605 gcatgatttaggataaaactaaattacaacgactcgaatgaacacaatacaaaaagtttctcaaacaattgacaactcctctaattgaattctaattttc 19331506  T
Q  200 cttcaaatg 208  Q
    |||||||||    
T  19331505 cttcaaatg 19331497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 26070656 - 26070488
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| |||||| |||||||| |||||| |||||||||  | || |||||||||||||| |||||||||||  ||||  ||||||||||||||||||| |    
T  26070656 tcttcatatccttgatccttcatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatggagttgcatgatttatg 26070557  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||| | ||||||| | | |||| | |||| ||||| |||  |||||||||  ||||| ||||||||    
T  26070556 ataaaactgaattacattaactcgaatgaaaacaatactaaattttcctcaaatgattgacaactcctc 26070488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 24841930 - 24841767
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttaggataaa 116  Q
    |||||| ||||||||  ||| | ||||| |||||| || |||||||||||||| || |||| |||   |||| |||||||||| |||||| |||||||||    
T  24841930 tatccttgatccttcacgtgttgtcttgatttttcaatttacatgatttctcactacaaaacactaaaaacacctatggagttccatgatctaggataaa 24841831  T
Q  117 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||| | |||||| || |||| | |||| ||||||| | ||||||||||||||||||||||||||    
T  24841830 agtgacttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaactcctc 24841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 18222602 - 18222510
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||| |||| | |||| ||||||| | ||| ||||||||||||| |||||    
T  18222602 aacacctatggatttgcatgatttaggataaaagtgaattacaatgactcgagttaaaacaatacaatatgtttctcaaaccattgacaactc 18222510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 212
Target Start/End: Complemental strand, 20083586 - 20083448
Alignment:
Q  75 aaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaa 172  Q
    ||||||||||||  || ||||||| ||||||||||||||||| || | ||||||||  | |||| |||||| |||| |||| ||||||||||| |||||     
T  20083586 aaaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattacaaatactcgaataaaaacaataaaaaatgttcctcaaactattgac 20083487  T
Q  173 aactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    |||||||| |||| | ||| ||||| ||||||||||||||    
T  20083486 aactcctctaata-atttttaatttgccttcaaatgcaaa 20083448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 11274262 - 11274369
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| |||||| |||||||| |||||| ||||| ||| ||||| |||||||||||| | || |||| ||||||  || |||||||||||||||||||||    
T  11274262 tcttcatatccttgatccttcatgtgatgtcttgatttgtcgatatacatgatttcttactacaaaacactcaaaacacctatggagttgcatgatttag 11274361  T
Q  111 gataaaag 118  Q
    ||||||||    
T  11274362 gataaaag 11274369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 7742801 - 7742967
Alignment:
Q  13 gtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttag 110  Q
    |||||| |||| ||||| ||||  ||||| | |||||||   ||| ||||||||||||||||||||| ||||||  ||  ||||   || ||||||||||    
T  7742801 gtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattaaaaaaactcaaaacacatatgattttacatgatttag 7742900  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    ||||||||| |||||||| || ||||   |||| ||||||||| |||| |||||||||||| |||||    
T  7742901 gataaaagtgaattacaaagactcgaacgaaaacaatacaaaatgttcttcaaaccattgacaactc 7742967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 19763865 - 19763988
Alignment:
Q  54 cgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 153  Q
    |||| |||||||||||||| ||||||||||||| |   ||| |||||||||||||||||||||| | || |||| ||  || | | |||| |||||||||    
T  19763865 cgatttacatgatttctcactaaaaagactcaaaacacatgaagttgcatgatttaggataaaactgaactacattgcctcaaatgaaaacaatacaaaa 19763964  T
Q  154 agttcctcaaaccattgaaaactc 177  Q
    |||||| |||||| |||| |||||    
T  19763965 agttccacaaacccttgagaactc 19763988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 24410869 - 24411030
Alignment:
Q  21 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaag 118  Q
    |||||||||||||| |||||| |||| ||||  | ||  ||||||||||||| |||||| ||||||  || ||    ||||||| ||||||||||||||     
T  24410869 atcctcgatccttcatgtgatgtcttattttgccaattgacatgatttctcactaaaaatactcaaaacacctcgcaagttgcacgatttaggataaaac 24410968  T
Q  119 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    | |||||||| || || | | |||| |||||||||  |||||||||||||||| ||||||||    
T  24410969 tgaattacaacgactcaaatgaaaacaatacaaaattttcctcaaaccattgacaactcctc 24411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 25680705 - 25680616
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaa 174  Q
    |||| ||||| ||||||||||||||| |||||| | |||||||| || |||| | |||| ||||||| | ||||||||||||||||||||    
T  25680705 aacacctatgaagttgcatgatttagaataaaattgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaa 25680616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 16634155 - 16634063
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||| |||| |||||||||||||||| |||||||| |||||||| || |||| | |||| ||||||| | ||| ||||||||||||| |||||    
T  16634155 aacacctatagagttgcatgatttagaataaaagtgaattacaacgactcgagtgaaaacaatacaatatgtttctcaaaccattgacaactc 16634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 17382052 - 17382136
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||||||||||||||| || ||||| || | || | |||| ||||||| | ||||||||||||||||| ||||||||    
T  17382052 agttgcatgatttaggataaaagtgaaatacaacgatttgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctc 17382136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 17027687 - 17027550
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcatt---aaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaat 133  Q
    ||||| ||||| ||||||||| |||||||||||||||    ||| || |  |||| |||||||||||| ||||||||||||||||| |||||||| || |    
T  17027687 gtgatgtcttgatttttcgatttacatgatttctcatggcaaaacagtcaaaacacctatggagttgcgtgatttaggataaaagtgaattacaacgact 17027588  T
Q  134 cgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    | | | |||| ||| ||| | |||||||||||| ||||    
T  17027587 caagtgaaaacaattcaatatgttcctcaaacccttga 17027550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 22643924 - 22644047
Alignment:
Q  139 aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaa 238  Q
    ||||| || ||| ||||||  |||||||||||| |||||||| ||  |||||  ||||||||||||||| |||| ||    |||||||||| | ||||||    
T  22643924 aaaaaaaaaacacaaagttaatcaaaccattgacaactcctctaaatgacttctaattttccttcaaatacaaagaaaataactaaaaatatacctaaaa 22644023  T
Q  239 atatcatatgttattccatcatca 262  Q
    |||| ||||||||||| |||||||    
T  22644024 atattatatgttattcaatcatca 22644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 24517463 - 24517368
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| |||||||||| ||||||| |||||||| || |||||||| || |||  | |||| ||||||| | ||||||||||||||||| ||||||||    
T  24517463 aacacctatggagttacatgattaaggataaatgtgaattacaacgactcgggtgaaaacaatacaatatgttcctcaaaccattgacaactcctc 24517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 24268655 - 24268581
Alignment:
Q  94 ggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 168  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||| | |||| ||||||| | ||||||||||||||    
T  24268655 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccat 24268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 24345284 - 24345210
Alignment:
Q  94 ggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 168  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||| | |||| ||||||| | ||||||||||||||    
T  24345284 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccat 24345210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 25594624 - 25594793
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttag 110  Q
    ||||| |||||| |||| ||| |||||| ||||  ||||||||| |||||||||||||| || |||| ||||  ||||  |||| |||||||| ||||||    
T  25594624 tcttcatatccttgatcgttcatgtgatgtcttaatttttcgatttacatgatttctcactataaaacactcaaaacacatatgaagttgcatcatttag 25594723  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||| | || |||||  | || | | |||| ||||||| | ||||||||||||||||| || |||||    
T  25594724 gataaaaatgaaatacaacaactccagtgaaaacaatacaatatgttcctcaaaccattgagaaatcctc 25594793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 18178284 - 18178166
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcga-tctacatgatttctcattaaaaagact--caacaactatggagttgc-atgattta 109  Q
    ||||| ||||||||||||||| || | | |||||||||||| | | |||||||||||||| ||||||||||   || | ||||| |||||| ||||||||    
T  18178284 tcttcatatcctcgatccttcatgcggtgtcttgttttttccaatttacatgatttctcactaaaaagactaaaaatacctatgaagttgcaatgattta 18178185  T
Q  110 ggataaaagtaaattacaa 128  Q
    |||||||| | ||||||||    
T  18178184 ggataaaactgaattacaa 18178166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 25367741 - 25367671
Alignment:
Q  49 tttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 117  Q
    |||| |||| |||||||||||||| |||||||||||  |||| ||||| |||||||||||||| |||||||    
T  25367741 ttttccgatttacatgatttctcactaaaaagactcaaaacacctatgaagttgcatgatttatgataaaa 25367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 15205752 - 15205658
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    |||| ||||||| ||||||||| ||||| |||| | |||||||| || |||| | |||| ||||||| | ||||||||||||| ||| |||||||    
T  15205752 aacacctatggaattgcatgatctaggagaaaactgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccactgacaactcct 15205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 16622673 - 16622767
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 179  Q
    |||| ||||| ||||||||||| ||||||||||||  |||||||  ||| || | || | ||||||| | ||||||||||||||||| |||||||    
T  16622673 aacacctatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaatacaatacaacatgttcctcaaaccattgacaactcct 16622767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 25367621 - 25367555
Alignment:
Q  193 aattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatca 259  Q
    |||||||||||||||||||| || || |||||||| | || ||||||  ||||||||||||||||||    
T  25367621 aattttccttcaaatgcaaagaaatatactaaaaacatagttaaaaacgtcatatgttattccatca 25367555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 12340026 - 12340115
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||||||||||| ||| |||||| | |||||||||||  | | | |||| |||| || | ||||||||||||||||| ||||||||    
T  12340026 tatgaagttgcatgatctagtataaaactgaattacaatgacacaagtgaaaataatataatatgttcctcaaaccattgacaactcctc 12340115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 11997900 - 11997968
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 153  Q
    |||| ||||| ||||||||||||||| ||||||| ||||| ||||||   || |||||| |||||||||    
T  11997900 aacacctatgaagttgcatgatttagtataaaaggaaattgcaatgacctgaataaaaacaatacaaaa 11997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 1720 - 1604
Alignment:
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 239  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  1720 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 1621  T
Q  240 tatcatatgttattcca 256  Q
     ||||||||||| ||||    
T  1620 catcatatgttaatcca 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 24507645 - 24507761
Alignment:
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 239  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  24507645 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 24507744  T
Q  240 tatcatatgttattcca 256  Q
     ||||||||||| ||||    
T  24507745 catcatatgttaatcca 24507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 17860460 - 17860540
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||| | |||| ||||||||| |||||||||||||||||    
T  17860460 tatggagttgcatgatttaagataaaagtaaatgacaatgactcgagtgaaaataatacaaaatgttcctcaaaccattga 17860540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 9943111 - 9943198
Alignment:
Q  43 tcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaa 128  Q
    |||||||||| |||| |||||||||||||| |||||| ||| ||  || |||||||||||||||||||||||||||||| ||||||||    
T  9943111 tcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattacaa 9943198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 26512755 - 26512878
Alignment:
Q  59 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 156  Q
    |||||||||||||| ||  |||||||||  || |||| | |||||||||| |||| ||||||| |||||||| ||||||| | |||| ||||||||| ||    
T  26512755 tacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgt 26512854  T
Q  157 tcctcaaaccattgaaaactcctc 180  Q
    | | ||||||||||| ||||||||    
T  26512855 tacacaaaccattgacaactcctc 26512878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 26517871 - 26517994
Alignment:
Q  59 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 156  Q
    |||||||||||||| ||  |||||||||  || |||| | |||||||||| |||| ||||||| |||||||| ||||||| | |||| ||||||||| ||    
T  26517871 tacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgt 26517970  T
Q  157 tcctcaaaccattgaaaactcctc 180  Q
    | | ||||||||||| ||||||||    
T  26517971 tacacaaaccattgacaactcctc 26517994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 16439616 - 16439482
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||| ||||||||||  ||| |||||||||||||| |||||||||||||  ||  | || |||||||| ||||||||||||||| ||||| || || ||     
T  16439616 tgatgtcttgtttttctgatttacatgatttctcactaaaaagactcaaaacacatgtgaagttgcattatttaggataaaagttaattataacgactc- 16439518  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    | |||||| ||||||||  || |||||||| |||||    
T  16439517 aataaaaacaatacaaattgtccctcaaactattga 16439482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 14768223 - 14768369
Alignment:
Q  36 tgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaat 133  Q
    |||||| |||||||||  |||| ||||||||||||   | |||||||||||  ||  |||| | ||||||| ||||| ||||| || ||||||||| | |    
T  14768223 tgtgatgtcttgttttgccgatttacatgatttctatctgaaaagactcaaaacatttatgaaattgcatgttttagaataaatgtgaattacaataact 14768322  T
Q  134 cgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||| | |||  |||||||||| |||||||||||| ||| ||||||||    
T  14768323 cgaatgaaaccaatacaaaaaattcctcaaaccaatgacaactcctc 14768369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 26499779 - 26499884
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||| ||||||||||| |||  ||| |||||||||||  |||| | |||||||||||| |||||| ||||  |||| ||||| | || |||||||||||    
T  26499779 tcttcatatcctcgatctttcacgtggtatcttgttttgccgatttgcatgatttctcactaaaaacactcataacacctatgaaattacatgatttagg 26499878  T
Q  112 ataaaa 117  Q
    ||||||    
T  26499879 ataaaa 26499884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 32930412 - 32930573
Alignment:
Q  21 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaag 118  Q
    ||||| |||||| | |||||| |||||||||  | || |||||||||||||| |||||||||||  |||| ||||  | ||||||| || ||||||||||    
T  32930412 atccttgatcctccatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacatctatcaaattgcatgtttaaggataaaag 32930511  T
Q  119 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    | ||||| || || ||   |  ||| || |||||| ||||| ||||||||||| ||||||||    
T  32930512 tgaattaaaacgactcttatggaaacaaaacaaaatgttccgcaaaccattgacaactcctc 32930573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 9396539 - 9396642
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    ||||||| |||| ||||||||  ||||| |||||||||  |||| || ||||||||||| |||||||||||  ||||  |||| |||||||||||||||     
T  9396539 tcttcttgtccttgatccttcacgtgatgtcttgttttgccgattta-atgatttctcactaaaaagactcaaaacacatatgaagttgcatgatttaga 9396637  T
Q  112 ataaa 116  Q
    |||||    
T  9396638 ataaa 9396642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 13759467 - 13759552
Alignment:
Q  95 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||| ||| |||||| | |||||||| || |||| | |||| ||| ||| | ||||||||||||||||| ||||||||    
T  13759467 gagttgcatgatatagaataaaattgaattacaacgattcgagtgaaaacaattcaatatgttcctcaaaccattgacaactcctc 13759552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 12972317 - 12972433
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||| |||||| |||  || || ||||| ||||  ||| |||||||||||||  |||||||||||||  ||  |||| ||||||||||||||||    
T  12972317 tcttcatatcatcgatctttcacgttatgtcttggttttctgatttacatgatttctccctaaaaagactcaaaacacgtatgaagttgcatgatttagg 12972416  T
Q  112 ataaaagtaaattacaa 128  Q
    ||| || | ||||||||    
T  12972417 atacaactgaattacaa 12972433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 20495806 - 20495890
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    |||| |||||||| ||||| ||||||| | |||||||| || || | |||||| ||| ||||| ||||||||||||||||| ||||    
T  20495806 tatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaaccattgataact 20495890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 22559176 - 22559250
Alignment:
Q  44 cttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 117  Q
    |||||||||||||| |||||||||||||| | ||||||| |  |||| ||||| ||||||||||||| ||| ||||    
T  22559176 cttgttttttcgatttacatgatttctcact-aaaagacccaaaacacctatgaagttgcatgatttgggaaaaaa 22559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 1616 - 1457
Alignment:
Q  23 cctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagta 120  Q
    |||||||| ||| |||||| || ||||||| |||| |||||||||| |||| ||||||||||  |||| || | ||||||||||||| | |||||||||     
T  1616 cctcgatctttcatgtgatttcatgtttttccgatttacatgatttttcataaaaaagactcgaaacatcttttgagttgcatgattaatgataaaagtg 1517  T
Q  121 aattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||| |||||||||| | |||| ||||||||| | ||||||||  ||||| ||||||||    
T  1516 aattaaaatgaatcgaatgaaaacaatacaaaatgctcctcaaaatattgacaactcctc 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 26102239 - 26102080
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||| |||| |||  ||||| ||||||||| ||||| | || ||| ||||| |||||||||||||  || | ||||||||||||||||||||    
T  26102239 tcttcatatccttgatcattcacgtgatgtcttgttttgtcgatttgcacgatatctcactaaaaagactcaaaacacccatggagttgcatgatttagg 26102140  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    |||||||| ||||||||  | |||| | |||| ||||||||| | |||||||||||||||    
T  26102139 ataaaagtgaattacaacaactcgaatgaaaacaatacaaaatggtcctcaaaccattga 26102080  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 52271177 - 52271426
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| |||||||||||||||  |||   | |||||||  |||| ||||| |||||||| |||||||||||||  || |||||||||||||| |||||||    
T  52271177 tcttcatatcctcgatccttcacgtggcgttttgttttgccgatttacataatttctcactaaaaagactcaaaacatctatggagttgcataatttagg 52271276  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaa 211  Q
    |  ||||| ||| |||| || |  | | |||| | |||| ||| |||||||||||| ||| |||||||| | | || |   | ||| |||| ||||||||    
T  52271277 aataaagtgaatgacaacgacttaaatgaaaaaagtacacaaatttcctcaaaccaatgacaactcctctatt-gaatcctattttgcctttaaatgcaa 52271375  T
Q  212 ataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 262  Q
    | |||||||||||||| | || |||||| ||||||||||||||||||||||    
T  52271376 agaattacactaaaaacatagttaaaaacatcatatgttattccatcatca 52271426  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 23223513 - 23223425
Alignment:
Q  93 tggagttgcatgatttaggataaaagtaaattacaatgaatcga-ttaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||   ||||||||||||||||| ||||||||    
T  23223513 tggagttgcatgatttaggataaaagtaaattacaacgaatcgagtgaaaaaaaatacaatgtgttcctcaaaccattgacaactcctc 23223425  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 15298802 - 15298967
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| ||||||||||||||    |||| |||||||||  |||| |||||||||| ||| |||| |||| |||  || ||||| ||||||||||||| ||    
T  15298802 tcttcatatcctcgatcctttacatgatttcttgttttgccgatttacatgatttatcactaaatagacacaaaacacctatgaagttgcatgattttgg 15298901  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||||| | ||||||||||| || | | || | |||||||||| |||||||||||||||| |||||    
T  15298902 ataaaacttaattacaatgattcaaatgaatacaatacaaaaacttcctcaaaccattgacaactc 15298967  T

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Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 18795350 - 18795163
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 124  Q
    ||||| || |||||| |||||||||   ||| |||| ||||||||| ||||| |||||||  || ||||| || || |||| ||||||||||||||||||    
T  18795350 gatccatcatgtgatgtcttgttttgctgatttacacgatttctcactaaaatgactcaaaacacctatgaagctgtatgacttaggataaaagtaaatt 18795251  T
Q  125 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
    ||||| | || | | ||||  |||||||| ||||||||||||||||| || ||||| ||  ||| |   |||||||||||||||||||    
T  18795250 acaattactcaaatgaaaacgatacaaaatgttcctcaaaccattgataaatcctctaaatgacctcttattttccttcaaatgcaaa 18795163  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 19257736 - 19257895
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 111  Q
    ||||| ||||||||||| ||| |||||| ||||||| |  | || |||| ||||||||| |||||| ||||||  || ||| ||| ||||||||||||||    
T  19257736 tcttcatatcctcgatctttcatgtgatgtcttgttatgccaatttacacgatttctcactaaaaatactcaaaacacctaaggacttgcatgatttagg 19257835  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    ||||||   ||||||||||| | || | |||| |||||| ||||||||||||| ||||||    
T  19257836 ataaaatcgaattacaatgactagaatgaaaacaatacagaaagttcctcaaatcattga 19257895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 25727841 - 25728000
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| ||||||  ||||||| |||||||| ||| ||| ||||| |||||||||||||| || |||| ||||||  || |||| ||||||||||||||||    
T  25727841 tcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttag 25727940  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattg 170  Q
    ||||||||| |||||||| || | || | |||| ||||||| |  ||||| |||||||||    
T  25727941 gataaaagtgaattacaacgattagagtgaaaacaatacaatacattccttaaaccattg 25728000  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 25736249 - 25736408
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 110  Q
    ||||| ||||||  ||||||| |||||||| ||| ||| ||||| |||||||||||||| || |||| ||||||  || |||| ||||||||||||||||    
T  25736249 tcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttag 25736348  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattg 170  Q
    ||||||||| |||||||| || | || | |||| ||||||| |  ||||| |||||||||    
T  25736349 gataaaagtgaattacaacgattagagtgaaaacaatacaatacattccttaaaccattg 25736408  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 59 - 247
Target Start/End: Original strand, 26854297 - 26854485
Alignment:
Q  59 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 156  Q
    |||||||||||||  |||||||||||||  || ||||| ||||| |||| ||||||||||| | |||||||| || | || | |||||||||||||||||    
T  26854297 tacatgatttctc--taaaaagactcaaaacatctatgaagttgtatgaattaggataaaattgaattacaacgacttgaatgaaaagaatacaaaaagt 26854394  T
Q  157 tcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatat 247  Q
    |||||||| |||| | |||| ||| ||| |||||  | |||   || ||||||||||||    |||||||||| ||||||||| |||||||    
T  26854395 tcctcaaaacattaacaacttctctaattgacttatattttgtttttaaatgcaaataaaataactaaaaatatagctaaaaacatcatat 26854485  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 25126656 - 25126462
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaa 117  Q
    ||||||| |||||||  ||||| |||| |||||   || ||||||||||||||||||||||||||||  ||  |||  | |  |||||||||||||||||    
T  25126656 tatcctcaatccttcacgtgatgtcttatttttctaatttacatgatttctcattaaaaagactcaaaacacatatataatcacatgatttaggataaaa 25126557  T
Q  118 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 212  Q
     | |||||| | || || | |||||| |||||||||| || ||||||||||||| |||||||| ||  |||||  | ||| ||||||||||||||    
T  25126556 ctgaattaccacgactcaaataaaaacaatacaaaaaatttctcaaaccattgacaactcctccaaatgacttctattttgccttcaaatgcaaa 25126462  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 19884276 - 19884190
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    |||||||||||||||||||||||||||||  |||||||  ||||||| | |||| |||| |||| ||||||||||||||||| ||||    
T  19884276 ctatggagttgcatgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaaccattgataact 19884190  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 30675627 - 30675498
Alignment:
Q  54 cgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaataca 150  Q
    |||| |||||||||||||| || |||| ||||||  || ||||||||||||||||| ||||| ||||||  ||||||| || |||| | |||| ||||||    
T  30675627 cgatttacatgatttctcactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtattacaacgactcgagtgaaaacaataca 30675528  T
Q  151 aaaagttcctcaaaccattgaaaactcctc 180  Q
    | | ||||||||||||||||| ||||||||    
T  30675527 atatgttcctcaaaccattgacaactcctc 30675498  T

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Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 21548807 - 21548619
Alignment:
Q  37 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatc 134  Q
    ||||| |||||||||| |||| ||| ||||||| || || ||||||||  ||||  |||||||||||||  |||||||||||| | |||||||| || ||    
T  21548807 gtgatgtcttgtttttccgatttacttgatttcacactagaaagactccaaacacttatggagttgcattttttaggataaaactgaattacaacgactc 21548708  T
Q  135 gattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacacta 223  Q
    || | |||| |||| |||||||| ||||||||||    |||||||  ||| ||||   ||||| |||||| |||||||||| |||||||    
T  21548707 gaatgaaaacaatataaaaagtttctcaaaccatcatcaactcctttaatggactactaatttgccttcatatgcaaataaatacacta 21548619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 25494442 - 25494580
Alignment:
Q  36 tgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||||| ||||| ||| ||||| |||||||||||||| || |||      ||| ||||| ||||||||||||||||||||||||||||||||| || ||     
T  25494442 tgtgatgtcttgatttgtcgatttacatgatttctcactacaaa------acacctatgtagttgcatgatttaggataaaagtaaattacaaggactca 25494535  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |   |||| || |||| | ||||||||||||||||| ||||||||    
T  25494536 agagaaaacaagacaatatgttcctcaaaccattgacaactcctc 25494580  T

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Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 26657630 - 26657490
Alignment:
Q  43 tcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 139  Q
    ||||| ||| ||||| |||||||||| ||| || |||| ||||||  || |||||||||||| |||| |||||||||||| |||||||| ||||||| |     
T  26657630 tcttgatttgtcgatttacatgatttttcactacaaaacactcaaaacacctatggagttgcgtgatctaggataaaagtgaattacaacgaatcgagtg 26657531  T
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||||||  |  |||||||||||||||| ||||||||    
T  26657530 aaaacaatacattatattcctcaaaccattgacaactcctc 26657490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 27461114 - 27461266
Alignment:
Q  15 cttcttatcctcgatccttcgtgtgatatcttgttttttc-gatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 111  Q
    |||| ||||||||||| ||| |||||| |||||||||||| ||  |||||||||||| | ||||||||||   |||| ||||| |||||||| |||||||    
T  27461114 cttcatatcctcgatctttcatgtgatgtcttgttttttccgacttacatgatttcttactaaaaagactacaaacacctatgaagttgcataatttagg 27461213  T
Q  112 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaa 164  Q
    |||||||| ||||| ||  | | || | |||| ||||||||| ||||||||||    
T  27461214 ataaaagtgaattataacaacttgaatgaaaacaatacaaaatgttcctcaaa 27461266  T

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Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 11769926 - 11770086
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaa--ctatggagttgcatgatttag 110  Q
    ||||| |||| | |||| ||| |||||| ||||| ||||||||| |||||||||||||| |  |||| ||||||||   | ||| |||| ||||||||||    
T  11769926 tcttcatatctttgatcattcatgtgatgtcttgatttttcgatttacatgatttctcactgcaaaacactcaacacacccatgaagtttcatgatttag 11770025  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    ||||||||| |||||||| ||  ||| | |||| ||||||| | |||||| ||||||||||    
T  11770026 gataaaagtgaattacaacgacacgagtgaaaacaatacaatatgttccttaaaccattga 11770086  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 25730511 - 25730663
Alignment:
Q  22 tcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaag 118  Q
    |||| |||||||| |||||||||||| ||| ||||| |||||||||||||  || |||| ||||  |||| || || ||||||||||||||||||||||     
T  25730511 tccttgatccttcatgtgatatcttgatttgtcgatttacatgatttctcgctacaaaacactcaaaacacctgtgaagttgcatgatttaggataaaat 25730610  T
Q  119 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 171  Q
    | |||| |||||| | || | |||| ||||||| | | ||||||| |||||||    
T  25730611 tgaatttcaatgatttgaatgaaaacaatacaatacgctcctcaagccattga 25730663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 50047284 - 50047195
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||||||||| |||||||||||||||||| |||||| |||| |||| | |||| ||||||| | ||| |||||| |||||| ||||||||    
T  50047284 tatggagttgtatgatttaggataaaagtgaattaccatgactcgagtgaaaacaatacaatatgtttctcaaatcattgacaactcctc 50047195  T

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Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 31313720 - 31313618
Alignment:
Q  28 atccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatta 125  Q
    |||||||  ||||| | |||||||| | || |||||||||||| | |||||| ||||||  || ||||| |||||||||||||||||||||||| |||||    
T  31313720 atccttcacgtgatgtattgtttttccaatttacatgatttcttactaaaaaaactcaaaacacctatgaagttgcatgatttaggataaaagtgaatta 31313621  T
Q  126 caa 128  Q
    |||    
T  31313620 caa 31313618  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 8247663 - 8247758
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    |||| ||||||||||||||||| |||| |||||  |||||||||||| || | | |||| |||| || | ||||||||||||||||| | ||||||    
T  8247663 aacacctatggagttgcatgatctagggtaaaacaaaattacaatgactcaagtgaaaataataaaatatgttcctcaaaccattgatatctcctc 8247758  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 12810418 - 12810336
Alignment:
Q  98 ttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 180  Q
    ||||||||| |||||||||| | |||||||| || | || | |||| ||||||| | ||||||||||||||||| ||||||||    
T  12810418 ttgcatgatctaggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaaccattgacaactcctc 12810336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 18391186 - 18391100
Alignment:
Q  90 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 176  Q
    ||||||| ||||||||| |||||||||||| |||||||| || || | | |||| |||| |||| ||| ||||||||||||| ||||    
T  18391186 ctatggaattgcatgatctaggataaaagttaattacaacgactcaaatgaaaataatataaaatgttactcaaaccattgacaact 18391100  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 15416966 - 15417062
Alignment:
Q  74 taaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 168  Q
    |||||||||||||  || ||||  |||||||||||||| ||||||||| ||||| ||||||| || | |||| |||| |||| ||| ||||||||||    
T  15416966 taaaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaattaaaatgaattgaatgaaaacaataaaaaatgtttctcaaaccat 15417062  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 12423926 - 12424004
Alignment:
Q  91 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccatt 169  Q
    |||||||||||||||| || ||||||| | ||||||||||| |||| | |||| ||||  | | |||||||||||||||    
T  12423926 tatggagttgcatgatctaagataaaactgaattacaatgactcgagtgaaaacaatatcatatgttcctcaaaccatt 12424004  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 23519768 - 23519810
Alignment:
Q  89 actatggagttgcatgatttaggataaaagtaaattacaatga 131  Q
    ||||| |||||||||||| |||||||||||| |||||||||||    
T  23519768 actatagagttgcatgatctaggataaaagtgaattacaatga 23519810  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 21550930 - 21551010
Alignment:
Q  130 gaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||| | |||| ||||||||| |||||||||||||| || |||||||| ||| ||| |   |||| ||||||||||||    
T  21550930 gaatcgaatgaaaacaatacaaaatgttcctcaaaccatagacaactcctctaattgacctctgatttgccttcaaatgca 21551010  T

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Target: scaffold0043 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 58928 - 58688
Alignment:
Q  14 tcttcttatcctcgatccttcgtgtgatatcttgttttttcga-tctacatgatttctcattaaaaagactc-aacaac-tatggagttgcatgatttag 110  Q
    ||||| ||| ||||||||||| |||||| || ||||||  | | | |||||||||||||| ||||||||||  || ||| ||  ||||||||||||| ||    
T  58928 tcttcatattctcgatccttcatgtgatgtcctgttttacccaatttacatgatttctcactaaaaagacttgaaaaacataaagagttgcatgattcag 58829  T
Q  111 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 210  Q
    ||||||  |  ||||||||||  ||| | |||| ||||||||||||||||||||||||||| ||||||||  || |||||  ||||| ||||||||||||    
T  58828 gataaacctggattacaatgacccgaatgaaaacaatacaaaaagttcctcaaaccattgacaactcctctgattgacttctaatttgccttcaaatgca 58729  T
Q  211 aataattacactaaaaataaagctaaaaatatcatatgtta 251  Q
     | ||    || ||||| | ||||||||| |||||||||||    
T  58728 tagaaaataaccaaaaacatagctaaaaacatcatatgtta 58688  T

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Target: scaffold0190 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 262
Target Start/End: Original strand, 11654 - 11880
Alignment:
Q  38 tgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 135  Q
    |||| ||||||||| ||||| |||||||||||  |   |||||||||||  || | ||| ||||||||||||||||| |||| | |||||||| || ||     
T  11654 tgatgtcttgttttgtcgatttacatgatttcgtacggaaaagactcaaaacacccatgtagttgcatgatttaggacaaaactgaattacaacgattca 11753  T
Q  136 attaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagcta 235  Q
    | | ||||  ||||||||||||| ||||| |||||| |||||||| ||  |||||  | ||| |||||||||||||||||    |||||||| | |||      
T  11754 aatgaaaactatacaaaaagttcatcaaatcattgacaactcctctaaatgacttctattttgccttcaaatgcaaataaaataactaaaaacatagcct 11853  T
Q  236 aaaatatcatatgttattccatcatca 262  Q
    ||||||||||||| | ||| |||||||    
T  11854 aaaatatcatatgatgttcaatcatca 11880  T

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Target: scaffold0171 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 21506 - 21425
Alignment:
Q  85 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacc 166  Q
    ||||| |||| |||||||||||||||||||||||| |||||||| || |||| | |||| ||||||| ||||||||||||||    
T  21506 aacaattatgaagttgcatgatttaggataaaagtgaattacaacgactcgagtgaaaacaatacaataagttcctcaaacc 21425  T

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Target: scaffold0171; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 6282 - 6213
Alignment:
Q  108 taggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||||||||||||||||||||||| | || | |||| ||||||  | |||||||||||||||||||||||    
T  6282 taggataaaagtaaattacaatgacttgagtgaaaataatacattatgttcctcaaaccattgaaaactc 6213  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 26893 - 27007
Alignment:
Q  20 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaa 116  Q
    |||||| |||| |||  ||||| ||||  ||| ||||| |||||||||||||| ||  ||| ||||  |||| ||||| ||||| |||||||||||||||    
T  26893 tatccttgatctttcacgtgatgtcttaatttgtcgatttacatgatttctcactactaaacactcaaaacacctatgtagttgtatgatttaggataaa 26992  T
Q  117 agtaaattacaatga 131  Q
    |||||||||||||||    
T  26993 agtaaattacaatga 27007  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 228128 - 228295
Alignment:
Q  24 ctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggataaaagtaaa 122  Q
    |||||||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| |  |||||  | | | ||||||||||||| ||||||| | ||    
T  228128 ctcgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactataaaacatacaacacttttagggttgcatgatttatgataaaaatgaa 228227  T
Q  123 ttacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactt 190  Q
    |||||| || |||| | |||| |||  |||| ||||| |||| || |||||||||||| ||| |||||    
T  228228 ttacaacgactcgaatgaaaacaatttaaaatgttccacaaatcaatgaaaactcctctaattgactt 228295  T

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Target: scaffold1026 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 1850 - 1931
Alignment:
Q  96 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 177  Q
    |||||||| ||||||||||||| || |||||||||| | || | |||| |||||||||| ||||| ||| |||||| |||||    
T  1850 agttgcataatttaggataaaactagattacaatgactagaatgaaaacaatacaaaaatttccttaaatcattgacaactc 1931  T

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Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 13016 - 13116
Alignment:
Q  27 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaat 123  Q
    |||||||| |||||| ||||| ||| ||||| ||||||||| |||| || |||| ||||||  || || ||||||||||| ||||||||||||||| |||    
T  13016 gatccttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaacacctgtggagttgcataatttaggataaaagtgaat 13115  T
Q  124 t 124  Q
    |    
T  13116 t 13116  T

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Target: scaffold1149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 1839 - 1723
Alignment:
Q  140 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 239  Q
    |||| ||||||||| |||| |||||||| ||| || ||||  ||| |||||  ||| |||||||||||||||| |||||  ||||||| | ||   ||||    
T  1839 aaaacaatacaaaaggttcttcaaaccaatgacaaatcctataattgacttctaatattccttcaaatgcaaagaattaggctaaaaacatag-gcaaaa 1741  T
Q  240 tatcatatgttattccat 257  Q
     |||||||||||||||||    
T  1740 catcatatgttattccat 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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