View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6911_low_41 (Length: 226)
Name: NF6911_low_41
Description: NF6911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6911_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 48141635 - 48141832
Alignment:
| Q |
1 |
aagaaaagaccaatgggacgttatctaagctcgcacaatgcggaacttcaagggcgaaaaggaaggctagcggtatactggagagggtcaacagatctcc |
100 |
Q |
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| T |
48141635 |
aagaaaagaccaatgggacgttatctaagctcgcacaatgcggaacttcaagggcgaaaaggaaggctagcggtatactggagagggtcaacagatctcc |
48141734 |
T |
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| Q |
101 |
atccttaactcacactgcttagttaaatgaaaccttcaaaaatcagaaaatcacccgtgtaaataaattattacttgctttcttctgtacaaatggga |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
48141735 |
atccttaactcacactgcttagttaaatgaaaccttcaaaaatcagaaaatcacccgtgtaaataaattattacttgctttcttatgtacaaatggga |
48141832 |
T |
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