View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6914_low_1 (Length: 1128)

Name: NF6914_low_1
Description: NF6914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6914_low_1
NF6914_low_1
[»] chr2 (26 HSPs)
chr2 (20-443)||(28144272-28144695)
chr2 (441-677)||(41753222-41753458)
chr2 (19-285)||(25128114-25128380)
chr2 (755-983)||(41753536-41753762)
chr2 (20-282)||(22275749-22276011)
chr2 (20-282)||(12640630-12640892)
chr2 (19-282)||(22762279-22762542)
chr2 (20-293)||(24831898-24832171)
chr2 (20-253)||(23817804-23818037)
chr2 (20-282)||(24570379-24570641)
chr2 (298-443)||(28141465-28141610)
chr2 (298-437)||(27861173-27861310)
chr2 (107-285)||(21909096-21909274)
chr2 (320-443)||(23780459-23780583)
chr2 (336-443)||(25576476-25576584)
chr2 (336-412)||(22801418-22801495)
chr2 (339-410)||(25597364-25597436)
chr2 (875-983)||(5787764-5787872)
chr2 (167-264)||(14708580-14708677)
chr2 (337-378)||(13821802-13821843)
chr2 (326-374)||(11323577-11323625)
chr2 (325-412)||(27190241-27190331)
chr2 (325-412)||(27840055-27840145)
chr2 (339-408)||(20478503-20478576)
chr2 (795-829)||(6467552-6467586)
chr2 (336-405)||(25568699-25568771)
[»] chr8 (35 HSPs)
chr8 (441-677)||(23140851-23141087)
chr8 (441-677)||(37364405-37364640)
chr8 (755-982)||(13757054-13757278)
chr8 (20-282)||(20652947-20653209)
chr8 (20-282)||(16877709-16877971)
chr8 (755-983)||(37364719-37364945)
chr8 (20-282)||(21197116-21197378)
chr8 (755-975)||(23141167-23141386)
chr8 (26-285)||(23150850-23151109)
chr8 (20-282)||(21850951-21851213)
chr8 (20-285)||(22315102-22315358)
chr8 (33-293)||(25282024-25282285)
chr8 (20-282)||(22982341-22982603)
chr8 (468-602)||(13757409-13757543)
chr8 (134-293)||(26135833-26135992)
chr8 (46-285)||(24094043-24094283)
chr8 (449-677)||(10900001-10900226)
chr8 (34-285)||(24818244-24818495)
chr8 (325-430)||(12149499-12149605)
chr8 (336-443)||(21301548-21301656)
chr8 (298-410)||(24093400-24093510)
chr8 (325-443)||(23242100-23242219)
chr8 (336-413)||(17983179-17983257)
chr8 (924-983)||(42796825-42796884)
chr8 (621-677)||(13757357-13757412)
chr8 (441-599)||(21587007-21587161)
chr8 (780-829)||(21587637-21587686)
chr8 (771-822)||(10900322-10900373)
chr8 (326-408)||(9006755-9006839)
chr8 (326-408)||(23817984-23818068)
chr8 (336-374)||(22815000-22815038)
chr8 (611-676)||(21587463-21587528)
chr8 (879-982)||(21587748-21587850)
chr8 (580-645)||(19223766-19223831)
chr8 (338-386)||(22263837-22263886)
[»] chr6 (35 HSPs)
chr6 (441-677)||(1600474-1600710)
chr6 (441-677)||(4851240-4851477)
chr6 (19-285)||(14129160-14129426)
chr6 (20-285)||(25655183-25655448)
chr6 (755-983)||(1600169-1600394)
chr6 (20-279)||(15078680-15078939)
chr6 (20-282)||(18838224-18838486)
chr6 (20-282)||(23995951-23996213)
chr6 (20-282)||(16232912-16233174)
chr6 (26-282)||(18571354-18571610)
chr6 (20-282)||(1649100-1649362)
chr6 (20-293)||(16382689-16382962)
chr6 (20-282)||(25743403-25743665)
chr6 (755-983)||(4850945-4851171)
chr6 (31-273)||(21413330-21413570)
chr6 (32-285)||(23123887-23124140)
chr6 (123-293)||(16087023-16087193)
chr6 (47-218)||(17813490-17813661)
chr6 (107-293)||(19968716-19968904)
chr6 (320-438)||(20194592-20194713)
chr6 (320-438)||(22088615-22088736)
chr6 (20-127)||(16097909-16098015)
chr6 (324-443)||(12410341-12410461)
chr6 (104-220)||(26276695-26276811)
chr6 (121-209)||(16449835-16449923)
chr6 (336-443)||(17863472-17863580)
chr6 (209-293)||(14625292-14625376)
chr6 (325-413)||(7391316-7391406)
chr6 (336-410)||(21375901-21375978)
chr6 (508-587)||(24360186-24360265)
chr6 (325-412)||(18560475-18560565)
chr6 (338-385)||(34501075-34501122)
chr6 (348-404)||(20191900-20191958)
chr6 (348-404)||(22144033-22144091)
chr6 (336-374)||(23010694-23010732)
[»] chr7 (29 HSPs)
chr7 (19-285)||(45146382-45146647)
chr7 (26-285)||(21674719-21674978)
chr7 (20-285)||(14936172-14936437)
chr7 (20-285)||(15363765-15364030)
chr7 (20-293)||(12193373-12193646)
chr7 (26-285)||(17923505-17923764)
chr7 (19-293)||(13352968-13353242)
chr7 (20-285)||(4439753-4440018)
chr7 (20-293)||(7823717-7823990)
chr7 (20-273)||(13378535-13378788)
chr7 (20-293)||(27107954-27108227)
chr7 (757-983)||(12978117-12978342)
chr7 (20-282)||(12368756-12369017)
chr7 (32-285)||(23641344-23641595)
chr7 (298-443)||(17115095-17115240)
chr7 (23-219)||(20466673-20466869)
chr7 (336-443)||(17881305-17881415)
chr7 (153-285)||(17148251-17148384)
chr7 (336-413)||(10310233-10310311)
chr7 (33-132)||(17145451-17145550)
chr7 (144-209)||(11229234-11229299)
chr7 (636-677)||(12978413-12978454)
chr7 (327-443)||(20923155-20923273)
chr7 (340-408)||(9560668-9560738)
chr7 (338-408)||(12330787-12330859)
chr7 (326-374)||(15125002-15125050)
chr7 (336-374)||(17132395-17132433)
chr7 (322-386)||(14961016-14961081)
chr7 (322-386)||(15390488-15390553)
[»] chr3 (27 HSPs)
chr3 (441-677)||(50331058-50331294)
chr3 (20-285)||(6712810-6713075)
chr3 (19-293)||(18748127-18748396)
chr3 (20-282)||(8274809-8275071)
chr3 (20-282)||(15576218-15576480)
chr3 (20-282)||(17192562-17192824)
chr3 (20-282)||(16743113-16743375)
chr3 (756-983)||(50331374-50331592)
chr3 (19-282)||(6153248-6153511)
chr3 (20-221)||(13975455-13975656)
chr3 (33-293)||(267681-267940)
chr3 (299-443)||(16226867-16227009)
chr3 (441-599)||(12744530-12744686)
chr3 (325-443)||(13908509-13908628)
chr3 (99-254)||(21686471-21686626)
chr3 (325-443)||(16224291-16224410)
chr3 (322-443)||(22928287-22928408)
chr3 (441-599)||(36097879-36098033)
chr3 (875-983)||(12745441-12745550)
chr3 (875-982)||(36097176-36097283)
chr3 (780-829)||(36097340-36097389)
chr3 (878-948)||(29195977-29196048)
chr3 (486-567)||(14044265-14044346)
chr3 (508-618)||(14249315-14249424)
chr3 (336-374)||(16925330-16925368)
chr3 (780-829)||(12745325-12745374)
chr3 (611-676)||(36097507-36097572)
[»] chr4 (29 HSPs)
chr4 (19-285)||(12132579-12132845)
chr4 (20-282)||(13247484-13247746)
chr4 (20-288)||(14997149-14997417)
chr4 (20-293)||(15293328-15293601)
chr4 (20-280)||(55375529-55375789)
chr4 (57-282)||(37955999-37956223)
chr4 (20-282)||(9290674-9290936)
chr4 (20-221)||(16445383-16445584)
chr4 (74-282)||(12343061-12343269)
chr4 (32-285)||(16685090-16685343)
chr4 (441-677)||(13668152-13668388)
chr4 (441-677)||(13681009-13681245)
chr4 (441-676)||(13230773-13231007)
chr4 (336-430)||(11889695-11889790)
chr4 (336-443)||(12810192-12810301)
chr4 (298-443)||(14632924-14633067)
chr4 (875-983)||(282998-283107)
chr4 (755-827)||(13668468-13668540)
chr4 (755-827)||(13681325-13681397)
chr4 (336-403)||(18558618-18558686)
chr4 (780-829)||(283164-283213)
chr4 (780-829)||(39976089-39976138)
chr4 (875-982)||(39975920-39976027)
chr4 (500-599)||(283700-283797)
chr4 (441-599)||(39976614-39976768)
chr4 (917-983)||(13230457-13230522)
chr4 (611-676)||(39976246-39976311)
chr4 (360-443)||(10070377-10070461)
chr4 (780-827)||(13230621-13230668)
[»] chr1 (18 HSPs)
chr1 (20-282)||(22142284-22142546)
chr1 (20-282)||(20831635-20831897)
chr1 (20-282)||(20914064-20914326)
chr1 (34-293)||(21202544-21202803)
chr1 (441-674)||(43385706-43385939)
chr1 (20-142)||(46518715-46518837)
chr1 (500-587)||(45920090-45920177)
chr1 (500-587)||(49879828-49879915)
chr1 (336-408)||(25401564-25401640)
chr1 (771-829)||(43386037-43386095)
chr1 (336-405)||(4599378-4599451)
chr1 (336-378)||(22533931-22533973)
chr1 (336-407)||(10159027-10159102)
chr1 (336-408)||(18523172-18523245)
chr1 (336-386)||(25400502-25400553)
chr1 (336-374)||(21291219-21291257)
chr1 (116-153)||(20075398-20075435)
chr1 (326-386)||(33129171-33129232)
[»] scaffold0610 (1 HSPs)
scaffold0610 (20-293)||(9065-9338)
[»] scaffold1710 (1 HSPs)
scaffold1710 (20-293)||(1084-1357)
[»] scaffold0109 (1 HSPs)
scaffold0109 (20-282)||(44620-44882)
[»] chr5 (19 HSPs)
chr5 (20-282)||(11211047-11211309)
chr5 (20-282)||(24580964-24581226)
chr5 (20-293)||(21937541-21937814)
chr5 (20-273)||(27010847-27011099)
chr5 (28-174)||(23503304-23503450)
chr5 (298-443)||(36196842-36196988)
chr5 (313-443)||(25769536-25769667)
chr5 (298-443)||(22010882-22011027)
chr5 (34-226)||(24516369-24516560)
chr5 (875-983)||(33012824-33012933)
chr5 (890-981)||(38012566-38012658)
chr5 (163-243)||(16066183-16066263)
chr5 (336-403)||(22969662-22969730)
chr5 (500-599)||(33012141-33012238)
chr5 (611-676)||(33012544-33012609)
chr5 (780-829)||(33012718-33012767)
chr5 (326-374)||(20547211-20547259)
chr5 (336-386)||(25369023-25369074)
chr5 (495-540)||(20966123-20966168)
[»] scaffold0305 (1 HSPs)
scaffold0305 (20-293)||(10515-10788)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-293)||(78803-79076)
[»] scaffold0808 (1 HSPs)
scaffold0808 (20-282)||(1228-1490)
[»] scaffold0066 (1 HSPs)
scaffold0066 (20-282)||(46024-46286)
[»] scaffold0017 (1 HSPs)
scaffold0017 (19-285)||(13828-14093)
[»] scaffold0008 (2 HSPs)
scaffold0008 (20-282)||(23750-24012)
scaffold0008 (20-266)||(231444-231690)
[»] scaffold0037 (2 HSPs)
scaffold0037 (20-282)||(97885-98147)
scaffold0037 (20-279)||(23640-23899)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-293)||(40117-40390)
[»] scaffold0761 (1 HSPs)
scaffold0761 (20-282)||(560-822)
[»] scaffold0225 (1 HSPs)
scaffold0225 (20-282)||(23264-23526)
[»] scaffold0507 (1 HSPs)
scaffold0507 (20-293)||(507-779)
[»] scaffold0162 (1 HSPs)
scaffold0162 (20-293)||(12767-13040)
[»] scaffold0028 (1 HSPs)
scaffold0028 (20-293)||(106747-107020)
[»] scaffold0132 (2 HSPs)
scaffold0132 (20-282)||(14527-14789)
scaffold0132 (26-282)||(43408-43664)
[»] scaffold0021 (2 HSPs)
scaffold0021 (20-282)||(13121-13383)
scaffold0021 (20-129)||(6333-6442)
[»] scaffold0218 (1 HSPs)
scaffold0218 (26-282)||(4124-4380)
[»] scaffold0447 (2 HSPs)
scaffold0447 (26-282)||(5622-5867)
scaffold0447 (26-282)||(10236-10481)
[»] scaffold0383 (1 HSPs)
scaffold0383 (26-282)||(8231-8476)
[»] scaffold0234 (1 HSPs)
scaffold0234 (20-282)||(16345-16606)
[»] scaffold0117 (1 HSPs)
scaffold0117 (20-282)||(10483-10745)
[»] scaffold0589 (1 HSPs)
scaffold0589 (26-279)||(8860-9113)
[»] scaffold0124 (1 HSPs)
scaffold0124 (20-282)||(7984-8247)
[»] scaffold0310 (2 HSPs)
scaffold0310 (56-282)||(5370-5595)
scaffold0310 (20-124)||(14911-15014)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-293)||(122124-122397)
[»] scaffold0160 (1 HSPs)
scaffold0160 (69-282)||(1056-1269)
[»] scaffold0387 (1 HSPs)
scaffold0387 (20-252)||(14030-14262)
[»] scaffold0120 (1 HSPs)
scaffold0120 (20-282)||(22571-22826)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-293)||(78208-78403)
[»] scaffold0357 (2 HSPs)
scaffold0357 (20-187)||(14488-14655)
scaffold0357 (182-281)||(7411-7510)
[»] scaffold0692 (1 HSPs)
scaffold0692 (20-282)||(4049-4295)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-293)||(33169-33441)
[»] scaffold0554 (2 HSPs)
scaffold0554 (116-282)||(2986-3152)
scaffold0554 (20-141)||(3170-3291)
[»] scaffold0036 (2 HSPs)
scaffold0036 (441-676)||(48666-48899)
scaffold0036 (875-983)||(49115-49224)
[»] scaffold0077 (2 HSPs)
scaffold0077 (20-186)||(28440-28606)
scaffold0077 (188-282)||(36049-36143)
[»] scaffold0014 (1 HSPs)
scaffold0014 (135-285)||(202903-203053)
[»] scaffold0058 (1 HSPs)
scaffold0058 (32-288)||(73765-74020)
[»] scaffold0004 (2 HSPs)
scaffold0004 (32-240)||(370326-370533)
scaffold0004 (298-438)||(376785-376926)
[»] scaffold0551 (1 HSPs)
scaffold0551 (20-151)||(8096-8227)
[»] scaffold0615 (2 HSPs)
scaffold0615 (20-138)||(5201-5319)
scaffold0615 (150-282)||(5301-5433)
[»] scaffold0210 (2 HSPs)
scaffold0210 (298-443)||(18054-18198)
scaffold0210 (298-443)||(25946-26090)
[»] scaffold1068 (1 HSPs)
scaffold1068 (81-220)||(1002-1141)
[»] scaffold0049 (1 HSPs)
scaffold0049 (156-273)||(21238-21355)
[»] scaffold0483 (1 HSPs)
scaffold0483 (188-282)||(1-95)
[»] scaffold0116 (1 HSPs)
scaffold0116 (167-293)||(33900-34026)
[»] scaffold0005 (1 HSPs)
scaffold0005 (298-443)||(184225-184368)
[»] scaffold0056 (1 HSPs)
scaffold0056 (338-412)||(20703-20778)
[»] scaffold0009 (2 HSPs)
scaffold0009 (325-443)||(222437-222556)
scaffold0009 (336-443)||(50168-50279)
[»] scaffold0059 (1 HSPs)
scaffold0059 (305-413)||(29093-29198)
[»] scaffold0380 (2 HSPs)
scaffold0380 (553-672)||(15871-15990)
scaffold0380 (921-982)||(15571-15632)
[»] scaffold0051 (1 HSPs)
scaffold0051 (511-645)||(17229-17363)
[»] scaffold0159 (1 HSPs)
scaffold0159 (875-983)||(32137-32245)
[»] scaffold0194 (1 HSPs)
scaffold0194 (336-374)||(31648-31686)
[»] scaffold1312 (1 HSPs)
scaffold1312 (504-624)||(651-769)
[»] scaffold0338 (1 HSPs)
scaffold0338 (338-408)||(17058-17132)
[»] scaffold1804 (1 HSPs)
scaffold1804 (604-645)||(854-895)


Alignment Details
Target: chr2 (Bit Score: 360; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 20 - 443
Target Start/End: Complemental strand, 28144695 - 28144272
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  28144695 aagttaactcatcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcatg 28144596  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28144595 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgcgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 28144496  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaatttcgtggagagatagtgcccttttttaa 319  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28144495 ttggccagttaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaatttcgtggagagatagtgcccttttttaa 28144396  T
Q  320 actctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacctttgcacaacatgtcctggaattt 419  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || | |||    
T  28144395 actctaaaacctgtcttgctctctaagtaacctgagtgcatttcgtggcctttttcaaattgttttcgtcaaaacctttgcacaacatgtcttgaatttt 28144296  T
Q  420 ttggttcggtcccgcttgtcataa 443  Q
    ||||||||||| ||||||| ||||    
T  28144295 ttggttcggtctcgcttgtaataa 28144272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 41753222 - 41753458
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41753222 taaacatatactcttacattgatcatcacatttacatgtgtctcaacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 41753321  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41753322 atcttttttaagtaagagactttttgcgtcagtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 41753421  T
Q  641 gattttatggagaagggtttatgattctaactttcac 677  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41753422 gattttatggagaagtgtttatgattctaactttcac 41753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 19 - 285
Target Start/End: Complemental strand, 25128380 - 25128114
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||    
T  25128380 aaagtttactcctctttttgttggaccgtttgagattattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttatcgaatcttcat 25128281  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25128280 gatgtgtttcatgtgtctcagttgcggaagtatgtgtatgatgcaacacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 25128181  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| ||| |||||||||||||||| ||||||||||||||||| || ||||| ||| ||||||||||    
T  25128180 cttgaccagttaggattgaggatcgcgaagtgaagcgtttgcgtggaaaagatatcattttggtgaa 25128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 755 - 983
Target Start/End: Original strand, 41753536 - 41753762
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaata 854  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  41753536 tagtgattgttttgtccgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaacgagtattcattctacccaaaaaataaata 41753635  T
Q  855 aactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaa 954  Q
    ||||||||         |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41753636 aactcaat--aaaaaaatgacacatgattttaaagtgtcgctttgtcaactcagcaaaaacatgcattttttcattgttagatcccaccaaaaagcaaaa 41753733  T
Q  955 gtgaagatattttacgtaatagaggttgg 983  Q
    |||||| |||||||| ||||| |||||||    
T  41753734 gtgaaggtattttacataataaaggttgg 41753762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 22276011 - 22275749
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  22276011 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 22275912  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  22275911 atgtgtttcatgtgtctcagttgaggaagtatgtacatgatgcgtctcatgtgatacaagtggatgaattggaagtaagagataatttgacagttgagac 22275812  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  ||||||||||||| ||||| ||||| ||||||||    
T  22275811 ttggccggttaggattgaggatcgtgagatgaagcgtttgcgtggcaaggagattgttttggt 22275749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 12640630 - 12640892
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  12640630 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 12640729  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||  || |||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  12640730 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcttctcatgtgattcaagtggatgagttggaagtcagagataatttgaccgttgagac 12640829  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  12640830 tttgccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaagagattgttttggt 12640892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 22762279 - 22762542
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||| ||||| ||||||||||||  || ||||||||||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  22762279 aaagttgactcctcattttggtggaccgtttgatgttgttgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtccaatcttcat 22762378  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||||||| ||||||||  |||||| ||||||||||| ||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||||    
T  22762379 gatgtgtttcatgtgtctcagttgaggaagtttgtgtatgatgcgtctcatgtgattcaagtggacgaattggaagtaagagataatttaaccattgaga 22762478  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||| ||  ||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  22762479 cttgtccggttaggattgaggaccgtgaagtgaagcgtttgcgtggcaaggagattgttttggt 22762542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 24831898 - 24832171
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | ||| |||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  24831898 aagttgactcctcgttttgttggaccgtttgatgtcattaagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 24831997  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||| ||||| |||||  ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  24831998 atgtgtttcatgtgtctcagttgaggaagcatgtgcatgatacgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 24832097  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || |||  |||||||||||||||| ||  ||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  24832098 tttgccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaagagattgttttggtcaaggtgattt 24832171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 20 - 253
Target Start/End: Original strand, 23817804 - 23818037
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||| ||||||| ||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||  ||||| |||||||||||     
T  23817804 aagttgactcctagttttgtaggaccatttgaggttattgagaaggttggggttgtagcgtatcggattgcgttaccaccaactttgccgaatcttcata 23817903  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||| ||||||| ||| |||||||| ||||||||||| |||| |||||| ||||||||||||||||||||    
T  23817904 atgtgtttcatgtgtctcagttgaggaagtatgtatatgatgcgtctcatgtgatccaagtggatgagttggtagtaagagataatttgaccgttgagac 23818003  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaag 253  Q
     ||||| ||||||||||||||||| |||||||||    
T  23818004 gtggccgattaggattgaggatcgcgaagtgaag 23818037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 24570379 - 24570641
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  || ||||||||||||||||||||||| || ||||| ||| |||||| ||||||||||||||||||     
T  24570379 aagttgactcctcgttttgttggaccgtttgatgttgttgagaaggttggggttgtagcgtattggattgcgttaccaccatctttgtcgaatcttcata 24570478  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||| ||| | |||| ||| ||||||||  ||||||| || ||||||||||| ||||||||||||||||| ||    
T  24570479 atgtgtttcatgtgtctcagttgaggaagtacgtgcacgatgcgtctcatgtgatcgaagtggacgagttggaagtaagagataatttgaccgttgaaac 24570578  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||| |  ||||||||||||| | |||| ||||||||||||| ||||| ||||| ||||||||    
T  24570579 ttggtcggttaggattgaggaccttgaattgaagcgtttgcgtggcaaggagattgttttggt 24570641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 28141465 - 28141610
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacctt 397  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  28141465 gagagatagtgcccttttttaaactctaaaacccgtcttgctctctaagtaacctgagtgcattttgtggcctttttcaaactgttttcgtcaaaacctt 28141564  T
Q  398 tgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  28141565 tgcacaacatgtcctgaaatttttggttcgatcccacttgtaataa 28141610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 298 - 437
Target Start/End: Original strand, 27861173 - 27861310
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttc-aaactgtttttgtcaaaacct 396  Q
    |||||| ||||||||||||   ||||||||||  || ||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||    
T  27861173 gagagacagtgcccttttt---actctaaaacctgtcttgctctctaagtaacctgagtgcatttcgtggcctttttttaaactgttttcctcaaaacct 27861269  T
Q  397 ttgcacaacatgtcctggaatttttggttcggtcccgcttg 437  Q
    |||||||||||||||||| |||| | |||||||||||||||    
T  27861270 ttgcacaacatgtcctgggatttctagttcggtcccgcttg 27861310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 107 - 285
Target Start/End: Original strand, 21909096 - 21909274
Alignment:
Q  107 tcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatt 206  Q
    ||||||||| ||||||| |||||||| ||| | ||  |||||||||| |||||| |||| ||| ||||||||||||||||| | || ||||| |||||||    
T  21909096 tcgaatcttaatgatgtttttcatgtatcttaattgaggaagtatgtatatgatatgtctcatatgattcaagtggatgatattgaggtaagagataatt 21909195  T
Q  207 tgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| ||| ||||||||||| |||||||||| ||||| || || |||||  |  |||| ||||||||  ||||||||||    
T  21909196 tgactgttaagacttggccagttaggattgaagatcgggaggttaagcgcataagaggaaaagagatatttttggtgaa 21909274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 320 - 443
Target Start/End: Complemental strand, 23780583 - 23780459
Alignment:
Q  320 actctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatt 418  Q
    ||||||||||||||  | |||||||||||| |||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||||||  |||    
T  23780583 actctaaaactcgtcctactctctaagtaatctgagtgcattttgtggcctttttcaaaccgttttcgatcaaaacctttgcacaacatgtcctgagatt 23780484  T
Q  419 tttggttcggtcccgcttgtcataa 443  Q
    |   |||||||| ||||||| ||||    
T  23780483 tccagttcggtctcgcttgtaataa 23780459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 25576584 - 25576476
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggttcggtcccgc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| | |||||||||||||||| |||||||||  |||| | |||||||| |||    
T  25576584 tgctctctaagtaacctgagtgcatctcgtggcctttttcaaaccgttttcgatcaaaacctttgcacagcatgtcctgagatttctagttcggtctcgc 25576485  T
Q  435 ttgtcataa 443  Q
    |||| ||||    
T  25576484 ttgtaataa 25576476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 22801495 - 22801418
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttt-tgtcaaaacctttgcacaacatgtcct 412  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||| |||||  |||||||||||||||||| |||||||    
T  22801495 tgctctctatgtaacctgagtgcatcttgtggcatttttcaaaccgttttcggtcaaaacctttgcacaatatgtcct 22801418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 25597436 - 25597364
Alignment:
Q  339 tctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtc 410  Q
    |||||||||||  ||||||||| |||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  25597436 tctctaagtaaaatgagtgcatctcgtggcccttttcaaactgttttcgatcaaaacctttgcacaatatgtc 25597364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 875 - 983
Target Start/End: Original strand, 5787764 - 5787872
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    ||||||| |||||| ||||| || ||||||||   |||| || |||||||||||||||||| ||| ||||||||||| ||||||||  |||||||  |||    
T  5787764 cacataaatttaaaatgtcgtttcgtcaactccttaaaacacatgcattttttcattgttatatctcaccaaaaagcgaaagtgaatgtatttta-ataa 5787862  T
Q  974 tagaggttgg 983  Q
    ||||||||||    
T  5787863 tagaggttgg 5787872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 14708677 - 14708580
Alignment:
Q  167 catgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgagg 264  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||  |||||  | || | |||||||| ||||| ||||| ||||| ||| ||||    
T  14708677 catgtgattcgagtgaatgatttgcaagtaagggataatttgaccgtgaagactgtgtcattgaggattgaagatcgagaagttaagcggttgagagg 14708580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 13821843 - 13821802
Alignment:
Q  337 gctctctaagtaacctgagtgcatttcgtggcctttttcaaa 378  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  13821843 gctctctaagtaacctgagtgcatctcgtgacctttttcaaa 13821802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 11323625 - 11323577
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||  ||||||||||| ||||||||||||||||||| |||||||    
T  11323625 aaactcgtcctgctctctaagcaacctgagtgcatttcgtgaccttttt 11323577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 27190241 - 27190331
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcc---tttttcaaactgtttttgtcaaaacctttgcacaacatgtcct 412  Q
    |||||||||  ||||||||| ||||||||||||||| ||||||||   ||||| || |  ||||| ||||||| |||||||||||| ||||    
T  27190241 aaaactcgtcctgctctctatgtaacctgagtgcatctcgtggccctttttttaaaccattttttatcaaaacatttgcacaacatatcct 27190331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 27840055 - 27840145
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcc---tttttcaaactgtttttgtcaaaacctttgcacaacatgtcct 412  Q
    |||||||||  ||||||||| ||||||||||||||| ||||||||   ||||| || |  ||||| ||||||| |||||||||||| ||||    
T  27840055 aaaactcgtcctgctctctatgtaacctgagtgcatctcgtggccctttttttaaaccattttttatcaaaacatttgcacaacatatcct 27840145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 20478503 - 20478576
Alignment:
Q  339 tctctaagtaacctgagtgcatttcgtgg-cctttttcaaactgttttt---gtcaaaacctttgcacaacatg 408  Q
    |||||||||||||||||||||| ||||||  |||||||||||  |||||    |||||||||||||||||||||    
T  20478503 tctctaagtaacctgagtgcatctcgtggatctttttcaaacccttttttcgatcaaaacctttgcacaacatg 20478576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 795 - 829
Target Start/End: Complemental strand, 6467586 - 6467552
Alignment:
Q  795 agttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||||||||||||| ||||||||||||||    
T  6467586 agttattggtaattttatgggttagttgaaggagt 6467552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 25568699 - 25568771
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttt-tcaaactgttttt--gtcaaaacctttgcacaac 405  Q
    |||||| |||| ||||||||||||||| |||||||||| ||||||| |||||   | ||||||||||||||||    
T  25568699 tgctctgtaagcaacctgagtgcattttgtggccttttctcaaactctttttcgataaaaacctttgcacaac 25568771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 23140851 - 23141087
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23140851 taaacatatactcttacattgatcatcacatttacatgtgtctcaacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 23140950  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23140951 atcttttttaagtatgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 23141050  T
Q  641 gattttatggagaagggtttatgattctaactttcac 677  Q
    |||||||||||||||||||||||||||||||||||||    
T  23141051 gattttatggagaagggtttatgattctaactttcac 23141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 37364405 - 37364640
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37364405 taaacatctactcttatattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 37364504  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37364505 atcttttttaagtgtgagactttttgcgtatctgatttggtgacataatcaaataaggtaaaacacaggcataacatggttaaataggtggattgatggt 37364604  T
Q  641 gattttatggagaagggtttatgattctaactttcac 677  Q
    ||||||||||||||||||||||| |||||||||||||    
T  37364605 gattttatggagaagggtttatg-ttctaactttcac 37364640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 755 - 982
Target Start/End: Complemental strand, 13757278 - 13757054
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaata 854  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13757278 tagtgattgttttgtccgtggaaacattgaaaatagagcgagttattggttattttatggtttagttgaaggagtattcattctacccaaaaaataaata 13757179  T
Q  855 aactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaa 954  Q
    ||||||||         |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  13757178 aactcaat---aaaaaatgacacatgattttaaagtgtcgctttgtcaactcagcaaaaacatacattttttcattgttagatcccaccaaaaagcaaaa 13757082  T
Q  955 gtgaagatattttacgtaatagaggttg 982  Q
    |||||| |||||||| ||||||||||||    
T  13757081 gtgaaggtattttacataatagaggttg 13757054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 20652947 - 20653209
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||||||||||||  |  ||||||||||||||||||||||| |||||||| | | |||||| || ||||||||||||||||    
T  20652947 aagttgactcctcgtttcgttggaccgtttgatgtggttgagaaggttggggttgtagcgtatcggattgcattaccaccatcgttgtcgaatcttcatg 20653046  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||||||||||  || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  20653047 atgtgtttcatgtatctcagttgaggaagtatgtgtatgatgcatctcatgtgatccaagtggatgatttggaagtaagagataatttgaccgttgagac 20653146  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  20653147 ttggccggttaggattgaggatagtgaagtgaagcgtttgcgtggcaaagagattgttttggt 20653209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 16877709 - 16877971
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  16877709 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 16877808  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||| ||||  ||||||||||| ||||||  || |||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  16877809 atgtgtttcatgtgtcttagttgaggaagtatgtgcatgatgcttctcatgtgattcaagtggatgagttggaagtcagagataatttgaccgttgagac 16877908  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  16877909 tttgccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaagagattgttttggt 16877971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 755 - 983
Target Start/End: Original strand, 37364719 - 37364945
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaata 854  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  37364719 tagtgattgttttgtccgtggaaacattgaaaataaagcgagttattggtaattttatggtttaattgaaggagtattctttctacccaaaaaataaata 37364818  T
Q  855 aactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaa 954  Q
    ||||||||         |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  37364819 aactcaat--aaaaagatgacacaagattttaaagtgtcgctttgtcaactcagcaaaaacatgcattttttcattgttagatcacaccaaaaagcaaaa 37364916  T
Q  955 gtgaagatattttacgtaatagaggttgg 983  Q
    |||||| |||||||| |||||||||||||    
T  37364917 gtgaaggtattttacataatagaggttgg 37364945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 21197116 - 21197378
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  || |||||| |||||||||||||||| |||||||| ||| |||| |||||||||||||||||||||    
T  21197116 aagttgactcctcgttttgttgggccgtttgatgttgttgagacggttggggttgtagcgtatcggattgcgttaccatcgtctttgtcgaatcttcatg 21197215  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||| |||||||| |||| ||| ||||||||||||||||| || ||||||||||| |||||||||| |||||||||    
T  21197216 atgtgtttcatgtgtctcagttgaggaaatatgtgtacgatgcgtctcatgtgattcaagtggacgaattggaagtaagagataatttgatcgttgagac 21197315  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  ||||||||||||| | |||||||||||||||||| ||||| ||||| ||||||||    
T  21197316 ttggccggttaggattgaggaccatgaagtgaagcgtttgcgtggcaaggagattgttttggt 21197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 755 - 975
Target Start/End: Original strand, 23141167 - 23141386
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctaccc-aaaaaataaat 853  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23141167 tagtgattgttttgtccgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattgattctacccaaaaaaataaat 23141266  T
Q  854 aaactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaa 953  Q
    |||||||||         |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  23141267 aaactcaat--aaaaaaatgacacatgattttaaagtgtcgctttgtcaactcagcaaaaacatgcattttttcattgttagatcctaccaaaaagcaaa 23141364  T
Q  954 agtgaagatattttacgtaata 975  Q
    ||||||| |||||||| |||||    
T  23141365 agtgaaggtattttacataata 23141386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 23151109 - 23150850
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    ||||||| ||||||||| || |||||  || ||||||||||||||||||||||| ||| || | ||| |||| ||||||||||||||||||||||| |||    
T  23151109 actcctcattttgttggtccttttgatgttgttgagaaggttggggttgtagcgtatcagaatgcgttaccatcgtctttgtcgaatcttcatgatatgt 23151010  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||||||| ||||| || ||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23151009 ttcatgtgtctcaattgcggaagtatgtgtatgatgcgtctcatgcgatccaagtggatgaattggaagtaagggataatttgaccgttgagacttggcc 23150910  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    | || ||||||||||||||||||||||||| ||||  | ||||||||| |||||||||||    
T  23150909 agtttggattgaggatcgtgaagtgaagcggttgcatgacaaagagattgttttggtgaa 23150850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 21850951 - 21851213
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||     
T  21850951 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcagattgcgttaccaccgtctttgtcgaatcttcata 21851050  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  21851051 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgatccaagtggatgagttggaagtaagagataatttgacggttgagac 21851150  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||| | ||||||||  ||||||| ||||| ||||| ||||| ||||||||    
T  21851151 ttggccggttaggattaaagatcgtgagttgaagcggttgcgtggcaaggagattgttttggt 21851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 22315358 - 22315102
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| ||| |||||| || ||||||||| | ||||    
T  22315358 aagttgactcctcgttttgttggaccatttgagattattgagaaggttggggttgtagcatatcggattgcgttaccaccatcgttgtcgaatttacatg 22315259  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||         ||| || ||||| || ||||||| ||  |||||||||||||||||||||||||||||||| || |||||||||||||| ||    
T  22315258 atgtgtttca---------gttgcgaaagtacgtatatgatgcgttgcatgtgattcaagtggatgatttggaagtaagagacaatttgaccgttgaaac 22315168  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  22315167 ttggccagttaggattgaggatcgtgaagtgaagcgtttgcgtggcaaggagattgttttggtgaa 22315102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 33 - 293
Target Start/End: Complemental strand, 25282285 - 25282024
Alignment:
Q  33 gttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtc-tttgtcgaatcttcatgatgtgtttcatg 131  Q
    |||||||||| | ||||||| |||||||||| ||||| | ||||||  ||| |||| |||   | ||||| ||| |||||| ||||||||||||||||||    
T  25282285 gttttgttgggctgtttgagtttattgagaatgttggagatgtagcatatcagattgcgttttcgccgtcgtttttcgaattttcatgatgtgtttcatg 25282186  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    | ||||| ||  |||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||  ||||||||||| ||| ||||    
T  25282185 tatctcaattgaggaagtatgtgtatgatgtgtctcacgtgattcaagtggatgatttagaagtaagggataatttgattgttgagacttgaccagttag 25282086  T
Q  232 gattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  25282085 gattgaggatcgggaagtgaagcgtttgagaggcaaagagatcgttttggtgatggtgattt 25282024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 22982603 - 22982341
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||| |||||||||||  || ||||| |  |||||||||||||| |||||||| |||  ||||| |||||| ||||||||||||    
T  22982603 aagttgactcctcgttttgtcggaccgtttgatgttgttgaggaaattggggttgtagcgtatcggattgcgttgccaccatctttgccgaatcttcatg 22982504  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||| | ||| ||||||||||||||||||||  | |||||||| |||||||||||||||||||     
T  22982503 atgtgtttcatgtgtctcagttgaggaagtatgtgtatgacgcgtctcatgtgattcaagtggatgaactagaagtaagagataatttgaccgttgagat 22982404  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  ||||||||||||| || |||||||| |||||||| ||||| || || ||||||||    
T  22982403 ttggccggttaggattgaggaccgagaagtgaaacgtttgcgtggcaaggaaattgttttggt 22982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 468 - 602
Target Start/End: Complemental strand, 13757543 - 13757409
Alignment:
Q  468 acatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  13757543 acatttacatgtgtctcgacatatacaattgtatctaatatggaattttaaataacaattgacacattaacatatcttttttatgtgtgagactttttgc 13757444  T
Q  568 gtctgtgatttggtgacataatcaaataaggtaaa 602  Q
    |||||||||||||||||||||||||||||||||||    
T  13757443 gtctgtgatttggtgacataatcaaataaggtaaa 13757409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 134 - 293
Target Start/End: Original strand, 26135833 - 26135992
Alignment:
Q  134 tctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattagga 233  Q
    |||| ||| ||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  26135833 tctcggttgcggaagtatgtgtatgatgcgtctcacgtgattcaagtggatgattttgaagtaagggataatttgaccgttgaaacttggccagttagga 26135932  T
Q  234 ttgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||||||||| || ||||||| |||| |||||||| |||| |||||||| ||||| ||||    
T  26135933 ttgaggatcgggaggtgaagcatttgagaggcaaaaagatagttttggtaaaggtgattt 26135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 46 - 285
Target Start/End: Complemental strand, 24094283 - 24094043
Alignment:
Q  46 gtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat-gatgtgtttcatgtttctcagttacg 144  Q
    |||| |||||||  |||||||||| |||||| || |||||||||| |  |  ||||| ||||||||||||||| | | | |||||||| |||||    ||    
T  24094283 gtttaagattatcaagaaggttggagttgtaccgtatcggatttcattgcttccgtcgttgtcgaatcttcatagttttttttcatgtgtctcaacatcg 24094184  T
Q  145 gaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgt 244  Q
    ||||||||| |||||    ||| | |||||||||||||| ||||||||||||||||||||||||||| |||||||||| || || || ||||| |||||     
T  24094183 gaagtatgtttatgacccatcataggtgattcaagtggaggatttggaagtaagggataatttgaccattgagacttgaccgatcagtattgaagatcga 24094084  T
Q  245 gaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||| ||| | ||  |||| ||||||||||||||||||||    
T  24094083 gaagttaagagcttaagaggaaaagagatcgttttggtgaa 24094043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 449 - 677
Target Start/End: Original strand, 10900001 - 10900226
Alignment:
Q  449 tactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacatatcttttt 548  Q
    ||||||||||||| ||||| |||||  ||||||||| |||| ||| |||||||||||| ||||||||||||| |||| |||||  ||||||||||||  |    
T  10900001 tactcttacattggtcatctcatttgtatgtgtctcaacatctactattgtatctaatgtggaactttaaatgacaactgacattttaacatatcttcct 10900100  T
Q  549 gaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggtgattttat 648  Q
     ||| |||||||| | ||| |||  |||   ||||||||| |||||||||| | |  ||||||| ||||||||||| | ||| |||||| ||||||| ||    
T  10900101 taagagtgagactgtctgcatctccgat---gtgacataaccaaataaggtcagaaggaggcatgacatggttaaacaagtgaattgattgtgatttcat 10900197  T
Q  649 ggagaagggtttatgattctaactttcac 677  Q
    ||||   ||||||| ||| ||||||||||    
T  10900198 ggagtgaggtttataattataactttcac 10900226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 34 - 285
Target Start/End: Original strand, 24818244 - 24818495
Alignment:
Q  34 ttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtt 133  Q
    |||| |||| || |||||||| |||||||| || || |  |||||| |||||||| |||  || ||||  |||||||||||||||  ||| ||||||||     
T  24818244 ttttattggtccatttgagatcattgagaaagtgggagcagtagcgtatcggattgcgttgccgccgttgttgtcgaatcttcatagtgtatttcatgta 24818343  T
Q  134 tctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattagga 233  Q
    ||| |  |    ||||||||||||||   |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |  | ||||    
T  24818344 tctaaactcaaaaagtatgtgtatgacccgtcacatgtgattcaagtggatgatttggaagtaattgataatttgaccgttgagacttggtcggtgagga 24818443  T
Q  234 ttgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||  |||| ||||||| | | |   |||| ||| ||||||||||||||||    
T  24818444 ttgaacatcgagaagtgaggaggtcaagaggaaaatagatcgttttggtgaa 24818495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 12149499 - 12149605
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttgg 423  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||| ||||| | |    
T  12149499 aaaacccgtcttgctctctaagtaacctgagtgcatctcgtggcctttttcaaaccgctttcgatcaaaacctttgcacaacatgtcctgaaatttatag 12149598  T
Q  424 ttcggtc 430  Q
    |||||||    
T  12149599 ttcggtc 12149605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 443
Target Start/End: Original strand, 21301548 - 21301656
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactg-tttttgtcaaaacctttgcacaacatgtcctggaatttttggttcggtcccgc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||| |||||||||||||  |||| | |||||||| |||    
T  21301548 tgctctctaagtaacctgagtgcatctcgtggcctttttcaaaccgttttttatcaaaacctttgtacaacatgtcctgagatttctagttcggtctcgc 21301647  T
Q  435 ttgtcataa 443  Q
    |||| ||||    
T  21301648 ttgtaataa 21301656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 298 - 410
Target Start/End: Original strand, 24093400 - 24093510
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacct 396  Q
    |||||||||||||||||||   ||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||  |||| | |||||||||    
T  24093400 gagagatagtgcccttttt---actctaaaactcgtcctgatctctaagtaacctgagtgcatttcgtgacctttttcaaaccattttcgatcaaaacct 24093496  T
Q  397 ttgcacaacatgtc 410  Q
    || |||||||||||    
T  24093497 tttcacaacatgtc 24093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 23242219 - 23242100
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttgg 423  Q
    |||||||||  |||||| |||||||||||||||||| ||| |||||||||||||| ||||| | ||||||||||||||||||||||||||  |||| | |    
T  23242219 aaaactcgtcctgctctttaagtaacctgagtgcatctcgaggcctttttcaaaccgttttcgatcaaaacctttgcacaacatgtcctgagatttctag 23242120  T
Q  424 ttcggtcccgcttgtcataa 443  Q
    |||||||  |||||| ||||    
T  23242119 ttcggtcttgcttgtaataa 23242100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 17983257 - 17983179
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctg 413  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  17983257 tgctctctaagtaacttgagtgcatctcgtggcctttttcaaaccgttttcgatcaaaacctttgcacaacatgtcctg 17983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 924 - 983
Target Start/End: Original strand, 42796825 - 42796884
Alignment:
Q  924 tttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaatagaggttgg 983  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  42796825 tttcattgttagatcacaccaaaaagcaaaagtgaaggtattttacataatagaggttgg 42796884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 621 - 677
Target Start/End: Complemental strand, 13757412 - 13757357
Alignment:
Q  621 taaataggtggattgatggtgattttatggagaagggtttatgattctaactttcac 677  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  13757412 taaataggtg-attgatggtgattttatggagaagagtttatgattctaactttcac 13757357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 441 - 599
Target Start/End: Original strand, 21587007 - 21587161
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||||||||  || |||| ||||| |||||| | ||||||| |||| |||  ||| ||||||| || || ||||||| |||||||||||| ||||||    
T  21587007 taaacatctact--tatattggtcatctcatttataagtgtctcaacatctactcttgcatctaatgtgaaaatttaaattacaattgacacaataacat 21587104  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    |||| | | || ||||||||  | ||||||| |||| ||||||||||| ||||||||||    
T  21587105 atctctcttaattgtgagac--tatgcgtctatgatctggtgacataaccaaataaggt 21587161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 780 - 829
Target Start/End: Original strand, 21587637 - 21587686
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  21587637 attgaaaataaagtgagttattggtaattttatggtttagttgaaggagt 21587686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 771 - 822
Target Start/End: Original strand, 10900322 - 10900373
Alignment:
Q  771 cgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttg 822  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  10900322 cgtggaagtattgaaaatagatcgagttattggtaattttatggtttagttg 10900373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 9006839 - 9006755
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttt-tcaaactgtttttg-tcaaaacctttgcacaacatg 408  Q
    ||||||||  ||||||||||| ||||||||||||| |||||||||||| | ||||  |||| | |||||||||||||||||||||    
T  9006839 aaactcgtcctgctctctaagcaacctgagtgcatctcgtggccttttctaaaacctttttcgttcaaaacctttgcacaacatg 9006755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 23818068 - 23817984
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtgg-cctttttcaaactgtttttg-tcaaaacctttgcacaacatg 408  Q
    ||||||||  ||||||||||||||||||||||||| ||||||  |||||| || || ||| || |||||||||||||||||||||    
T  23818068 aaactcgtcctgctctctaagtaacctgagtgcatctcgtggttctttttaaacctttttgtgatcaaaacctttgcacaacatg 23817984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 22815038 - 22815000
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22815038 tgctctctaagcaacctgagtgcatttcgtggccttttt 22815000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 676
Target Start/End: Original strand, 21587463 - 21587528
Alignment:
Q  611 ataacatggttaaataggtggattgatggtgattttatggagaagggtttatgattctaactttca 676  Q
    |||||||| ||||| ||||||||| |||||||||| || ||||  ||||||||||||||| |||||    
T  21587463 ataacatgattaaaaaggtggattcatggtgatttcatcgagagaggtttatgattctaaatttca 21587528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 982
Target Start/End: Original strand, 21587748 - 21587850
Alignment:
Q  879 taattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaataga 977  Q
    |||||||||| | ||| ||||||||| | |||||| || ||||||||||||| |||||||||  ||||| ||||||||||||   ||||||  |||||||    
T  21587748 taattttaaaatatcgttttgtcaacacggcaaaacacatgcattttttcatcgttagatcc--ccaaagagcaaaagtgaaagaattttaaataataga 21587845  T
Q  978 ggttg 982  Q
    |||||    
T  21587846 ggttg 21587850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 645
Target Start/End: Original strand, 19223766 - 19223831
Alignment:
Q  580 gtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggtgattt 645  Q
    |||||||||||| |||| || |||||||| ||||||||| | ||| |||||  |||||||||||||    
T  19223766 gtgacataatcatataaagtcaaacagagacataacatgttcaaaaaggtgagttgatggtgattt 19223831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 22263886 - 22263837
Alignment:
Q  338 ctctctaagtaacctgagtgcatttcgtggcct-ttttcaaactgttttt 386  Q
    ||||||||| |||||||||||| |||||||||| |||||||||| |||||    
T  22263886 ctctctaagaaacctgagtgcacttcgtggccttttttcaaactcttttt 22263837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 217; Significance: 1e-118; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 441 - 677
Target Start/End: Complemental strand, 1600710 - 1600474
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1600710 taaatatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatataatatggaactttaaatcacaattgacacattaacat 1600611  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1600610 atattttttaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaatagaggcataacatggttaaataggtggattgatggt 1600511  T
Q  641 gattttatggagaagggtttatgattctaactttcac 677  Q
    |||||||||||||||||||||||||||||||||||||    
T  1600510 gattttatggagaagggtttatgattctaactttcac 1600474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 441 - 677
Target Start/End: Complemental strand, 4851477 - 4851240
Alignment:
Q  441 taaacatctactcttacattgatcatcacat-ttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaaca 539  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4851477 taaacatctactcttacattgatcatcacatattacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaaca 4851378  T
Q  540 tatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatgg 639  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4851377 tatcttttttaagtgtgagactttttgcgtctatgatttggtgacataaacaaataaggtaaaacagaggcataccatggttaaataggtgcattgatgg 4851278  T
Q  640 tgattttatggagaagggtttatgattctaactttcac 677  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4851277 tgattttatggagaatggtttatgattctaactttcac 4851240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 19 - 285
Target Start/End: Complemental strand, 14129426 - 14129160
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||    
T  14129426 aaagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgttgaatcttcat 14129327  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14129326 gatgtgtttcatgtgtctcagttgaggaagtatgtgtatgatgtgtctcatgtaattcaagtggatgatttggaagtaagggataatttgaccgttgaga 14129227  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||||||  |||| ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||    
T  14129226 cttggccggttagaattgaggatcgcgaagtgaagcgattgcgtggcaaagagattgttttggtgaa 14129160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 25655448 - 25655183
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||    
T  25655448 aagttaactccccgttttgttggaccatttgagattattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgttgaatcttcatg 25655349  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||||| ||| |||||||||||||||| |||||||||| |||| |||||||||| |||||||||    
T  25655348 atgtgtttcatgtgtctcagttgaggaagtatgtgtatgatgcgtctcatgtgattcaagtgggtgatttggaaataagagataatttgatcgttgagac 25655249  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||| | |||||||||||| ||||||||||||| ||||| ||||| ||||| |||||||||||    
T  25655248 ttggccagtaaggattgaggatagtgaagtgaagcggttgcgtggcaaggagattgttttggtgaa 25655183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 755 - 983
Target Start/End: Complemental strand, 1600394 - 1600169
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaata 854  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1600394 tagtgattgttttgtccgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcattctacccaaaaaataaata 1600295  T
Q  855 aactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaa 954  Q
    ||||||||         |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  1600294 aactcaat---aaaaaatgacacatgattttaaagtgtcgctttgtcaactcagcaaaaacatgcattttttaattgtgagatcccaccaaaaagcaaaa 1600198  T
Q  955 gtgaagatattttacgtaatagaggttgg 983  Q
    |||||| |||||||| |||||||||||||    
T  1600197 gtgaaggtattttacataatagaggttgg 1600169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 20 - 279
Target Start/End: Original strand, 15078680 - 15078939
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||| ||||||||||    
T  15078680 aagttgactcctcgttttgttggaccgtttgatgttgttgagaaggttggggttgtagcgtatcagattgcgttaccaccgtctttgtcaaatcttcatg 15078779  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||||| ||| |||||||| |||||| |||| ||||||||||| ||||||||||||||||||||    
T  15078780 atgtgtttcatgtatctcagttgaggaagtatgtgtatgatgcgtctcatgtgatccaagtgaatgaattggaagtaagagataatttgaccgttgagac 15078879  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgtttt 279  Q
    ||||||  |||||||||||||| |||||| |||||||||||| ||||||||||| |||||    
T  15078880 ttggccggttaggattgaggatagtgaagagaagcgtttgcgtggcaaagagattgtttt 15078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 18838224 - 18838486
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  18838224 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 18838323  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||||||||||||  || ||||  ||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  18838324 atgtgtttcatgtgcctaagttgaggaagtatgtgcatgatgcgtctcatgtgattcgagtggatgatttggaagtaagagataatttgacggttgagac 18838423  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  18838424 ttggccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 18838486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 23996213 - 23995951
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  23996213 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 23996114  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23996113 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatatgattcaagtggatgaattggaagtaagggataatttgacggttgagac 23996014  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||||||  ||||||||||||| |||||| |||| ||||||||    
T  23996013 tttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaatagattgttttggt 23995951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 16233174 - 16232912
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| || |||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  16233174 aagttgacacctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 16233075  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  16233074 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 16232975  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  16232974 tttgccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaagagattgttttggt 16232912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 157; E-Value: 7e-83
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 18571610 - 18571354
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||| |||| |    
T  18571610 actcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtagaatcttcataatgtat 18571511  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    || |||| ||||||||  ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  18571510 ttaatgtgtctcagttgaggaagtatgtgcatgatgtgtctcatgtgattcaagtggatgaattggaagtaagagataatctgaccgttgagacttggcc 18571411  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      |||||||||||||||||||  ||||||| ||||| || |||||||| ||||||||    
T  18571410 ggttaggattgaggatcgtgagatgaagcggttgcgtgggaaagagattgttttggt 18571354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 1649100 - 1649362
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  1649100 aagttgactcctcgttttgttgggccgtttgatgtgattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 1649199  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  1649200 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtggttcaagtggatgaattggaagtaagggataatttgacggttgagac 1649299  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  1649300 tttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 1649362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 16382689 - 16382962
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  16382689 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 16382788  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  16382789 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 16382888  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || ||| ||||||||||||||||| ||  ||||||||||||| ||||| ||||| | |||||| ||||| ||||    
T  16382889 tttgccgattaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgctttggtcaaggtgattt 16382962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 25743403 - 25743665
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||||| ||| |||||  |||||||||||||||||||||||||  |||||||| ||| |||||| ||||||||||||||||||     
T  25743403 aagttgactcctcgttttgttgcaccatttgatgttattgagaaggttggggttgtagcatatcggattgcgttaccaccatctttgtcgaatcttcatc 25743502  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    || |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  25743503 atatgtttcatgtgtctcagttgaggaagtatgtacatgatgcgtctcatgtgattcaagtggatgaattggaagtaagaaataatttgaccgttgagac 25743602  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||||| ||||||||||||||||| ||  ||||||||||| | ||||| ||||| ||||||||    
T  25743603 ttggccgattaggattgaggatcgagagatgaagcgtttgtgtggcaaggagattgttttggt 25743665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 755 - 983
Target Start/End: Complemental strand, 4851171 - 4850945
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaata 854  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  4851171 tagtgattgttttatccgtggaaacattgaaaatagagggagttattggtaattttatgatttagttgaaggactattcattctacccaaaaaataaata 4851072  T
Q  855 aactcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaa 954  Q
    ||||||||         |||||||  |||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  4851071 aactcaat--aaaaaaatgacacacgattttaaagtgtcgttttgtcaaatcaacaaaaacatgcattttttcattgttagatcccaccaaaaagcaaaa 4850974  T
Q  955 gtgaagatattttacgtaatagaggttgg 983  Q
    || ||| |||||||  ||||| |||||||    
T  4850973 gtaaaggtattttatataataaaggttgg 4850945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 21413330 - 21413570
Alignment:
Q  31 tcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcat 130  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||||| |||| ||| |||  ||||| | ||||||||||||||||||||||||||||    
T  21413330 tcgttttgttagaccgtttgatgttgttgagaaggttggggttgtagcgtatcgcattgcgttgccaccatatttgtcgaatcttcatgatgtgtttcat 21413429  T
Q  131 gtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaatta 230  Q
    ||  |||||||  |||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||   |||    
T  21413430 gt--ctcagttgaggaagtatgtgtatgatgcgtctcatgcgattcaagtggatgagttggaagtaagagataatatgatcgttgagacttggctggtta 21413527  T
Q  231 ggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagat 273  Q
    |||||||||| |||||||||||||||||||| ||||| |||||    
T  21413528 ggattgaggaccgtgaagtgaagcgtttgcgtggcaaggagat 21413570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 32 - 285
Target Start/End: Complemental strand, 23124140 - 23123887
Alignment:
Q  32 cgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatg 131  Q
    |||||||||||||||||||||||  | |||||||| || ||||||||| ||||||||   | ||| ||||| || |||||||| ||||||||||||||||    
T  23124140 cgttttgttggaccgtttgagatagtagagaaggtgggagttgtagcgtatcggattgtattacctccgtcgttatcgaatctccatgatgtgtttcatg 23124041  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    | ||||||||  |||||||||| ||||||  ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||| || | ||    
T  23124040 tatctcagttgaggaagtatgtctatgatccgtctcacgtgattcaagtggatgatttggaagtaagagataatttgatcattgagacttggtcagtgag 23123941  T
Q  232 gattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||| |||||||  ||||| ||||| ||  |||| ||||||||||||||||||||    
T  23123940 gatcgaggatcaggaagttaagcgcttaagaggaaaagagatcgttttggtgaa 23123887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 123 - 293
Target Start/End: Complemental strand, 16087193 - 16087023
Alignment:
Q  123 tgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttg 222  Q
    |||||||||| ||||||||  | ||||||||| |||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16087193 tgtttcatgtgtctcagttgagaaagtatgtgcatgatgcgtctcatgtgatccaagtggatgatttggaagtaagagataatttgaccgttgagacttg 16087094  T
Q  223 gccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||||    
T  16087093 gccagttaggattgaggaccgtgaagtgaaacgtttgcgtggcaaggagattgttttggtcaaggtgattt 16087023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 17813661 - 17813490
Alignment:
Q  47 tttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacgga 146  Q
    ||||| ||| ||||||||||||| || |||||| |||||||| | | || |||||| ||||||||||||||||||||||||||||| ||  ||| | |||    
T  17813661 tttgaaattgttgagaaggttggagtggtagcgtatcggattgcattactaccgtcgttgtcgaatcttcatgatgtgtttcatgtgtcgtagtcatgga 17813562  T
Q  147 agtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    ||||||||||||||| ||| || || ||||||||||||||||||||| |||||||||||||||| |||||||    
T  17813561 agtatgtgtatgatgcgtctcacgtaattcaagtggatgatttggaaataagggataatttgactgttgaga 17813490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 19968716 - 19968904
Alignment:
Q  107 tcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatt 206  Q
    |||||||||||| ||||||||||||| ||||||||   |||||||||||| |||||||   |  |||||||||||||||||||||||||||  || ||||    
T  19968716 tcgaatcttcataatgtgtttcatgtatctcagttgaagaagtatgtgtacgatgtgtatgacctgattcaagtggatgatttggaagtaaatgacaatt 19968815  T
Q  207 tgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgagg--caaagagatcgttttggtgaaggtaattt 293  Q
    ||||||||||||| |||| | | |||||||||||||| |||||||| | |||  ||||   ||||||||||||||||||||||| ||||    
T  19968816 tgaccgttgagacctggctagtcaggattgaggatcgagaagtgaatcatttaagaggaaaaaagagatcgttttggtgaaggtgattt 19968904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 20194713 - 20194592
Alignment:
Q  320 actctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcc--tttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaa 416  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||||  |    
T  20194713 actctaaaactcatcttgctctctaagtaacctaagtgcatttcgtggcccttttttcaaactgttttcgatcaaaacctttgcacaacatgtcctgaga 20194614  T
Q  417 tttttggttcggtcccgcttgt 438  Q
    ||||| |||||||| |||||||    
T  20194613 tttttagttcggtctcgcttgt 20194592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 22088736 - 22088615
Alignment:
Q  320 actctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcc--tttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaa 416  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||||  |    
T  22088736 actctaaaactcatcttgctctctaagtaacctaagtgcatttcgtggcccttttttcaaactgttttcgatcaaaacctttgcacaacatgtcctgaga 22088637  T
Q  417 tttttggttcggtcccgcttgt 438  Q
    ||||| |||||||| |||||||    
T  22088636 tttttagttcggtctcgcttgt 22088615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 16098015 - 16097909
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||| ||||||  | |||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||    
T  16098015 aagttgactcctcgttttgttggac-gtttgatgtgattgagaaggttggggttgtagcgtatcggattgtgttaccaccgtctttgtcgaatcttcatg 16097917  T
Q  120 atgtgttt 127  Q
    ||||||||    
T  16097916 atgtgttt 16097909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 12410461 - 12410341
Alignment:
Q  324 taaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttg 422  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| ||  ||||||     
T  12410461 taaaactcgtcctgctctctaagtaacctcagtgcatttcgtgacctttttcaaactgttttcgatcaaaacctttgcacaacatgtcgtgagattttta 12410362  T
Q  423 gttcggtcccgcttgtcataa 443  Q
     |||||||  |||||| ||||    
T  12410361 attcggtcttgcttgtaataa 12410341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 26276811 - 26276695
Alignment:
Q  104 ttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggata 203  Q
    ||||||||||| |||  |||||||||||| |||||| | | ||||||||| || ||  |||| |||||||||||||||||| ||||||||||||||||||    
T  26276811 ttgtcgaatctacatagtgtgtttcatgtgtctcagcttcagaagtatgtctacgacttgtcgcatgtgattcaagtggataatttggaagtaagggata 26276712  T
Q  204 atttgaccgttgagact 220  Q
    || ||||| ||||||||    
T  26276711 atatgaccattgagact 26276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 16449923 - 16449835
Alignment:
Q  121 tgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttga 209  Q
    |||||||||||| |||||||| || ||||||||||||||   |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  16449923 tgtgtttcatgtgtctcagttgcgaaagtatgtgtatgacccgtcacatgtgattcaagtggatgattaggaattaaggaataatttga 16449835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 336 - 443
Target Start/End: Original strand, 17863472 - 17863580
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggttcggtcccgc 434  Q
    |||||||||||||||||||||||||||| |||||||||||||||  |||| | |||||||||||||| |||||||||||  |||| | |||||||  |||    
T  17863472 tgctctctaagtaacctgagtgcatttcatggcctttttcaaaccattttcgatcaaaacctttgcaaaacatgtcctgagatttctagttcggtatcgc 17863571  T
Q  435 ttgtcataa 443  Q
    |||| ||||    
T  17863572 ttgtaataa 17863580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 14625292 - 14625376
Alignment:
Q  209 accgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||||||||| |||  |||||||||||||||||||  ||||||||||||| ||||| ||||| |||||||| ||||| ||||    
T  14625292 accgttgagactttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaggagattgttttggtcaaggtgattt 14625376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 325 - 413
Target Start/End: Original strand, 7391316 - 7391406
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtgg-cctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctg 413  Q
    |||||||||  ||||||||||||||||| |||||||  ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||    
T  7391316 aaaactcgtcctgctctctaagtaacctaagtgcatcccgtggccctttttcaaaccgttttcgatcaaaacctttgcgcaacatgtcctg 7391406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 21375978 - 21375901
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcc--tttttcaaac-tgtttttgtcaaaacctttgcacaacatgtc 410  Q
    ||||||||||||||||||||||||| || |||||  |||||||||| | ||| | |||||||||||||||||||||||    
T  21375978 tgctctctaagtaacctgagtgcatctcatggcccttttttcaaacatttttctatcaaaacctttgcacaacatgtc 21375901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 508 - 587
Target Start/End: Original strand, 24360186 - 24360265
Alignment:
Q  508 tggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacata 587  Q
    ||||||||||| ||| ||||||||||||||||||| |  ||  ||||||||||||  ||| | |||||||||||||||||    
T  24360186 tggaactttaagtcaaaattgacacattaacatatttcctttcagtgtgagacttgatgcatttgtgatttggtgacata 24360265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 18560475 - 18560565
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcc--tttttcaaactgtttttg-tcaaaacctttgcacaacatgtcct 412  Q
    |||||||||  |||||||||| |||  ||||||||| || |||||  |||||||||| ||| | | |||||||||||||||||||||||||    
T  18560475 aaaactcgtcatgctctctaaataatttgagtgcatctcatggcccttttttcaaaccgttatcgatcaaaacctttgcacaacatgtcct 18560565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 34501122 - 34501075
Alignment:
Q  338 ctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttt 385  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||| ||||    
T  34501122 ctctctaagcaacctgagtgcctttcgtggccttttttaaactctttt 34501075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 20191900 - 20191958
Alignment:
Q  348 aacctgagtgcatttcgtggcc-tttttcaaactgtttttg-tcaaaacctttgcacaa 404  Q
    |||||||||||||||||||||| ||||||||||| |||| | | |||||||||||||||    
T  20191900 aacctgagtgcatttcgtggccttttttcaaactcttttcgataaaaacctttgcacaa 20191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 22144091 - 22144033
Alignment:
Q  348 aacctgagtgcatttcgtggcct-ttttcaaactgtttttg-tcaaaacctttgcacaa 404  Q
    ||||||||||||||||||||||| |||||||||| |||| | | |||||||||||||||    
T  22144091 aacctgagtgcatttcgtggccttttttcaaactcttttcgataaaaacctttgcacaa 22144033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 23010694 - 23010732
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  23010694 tgctctctaagcaacctgagtgcacttcgtggccttttt 23010732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-105; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 19 - 285
Target Start/End: Complemental strand, 45146647 - 45146382
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | | |||||||||||||||||||||||||    
T  45146647 aaagttgactcctcattttgttggaccgtttgagattattgagaaggttggggttttagcgtatcggattacattaccaccgtctttgtcgaatcttcat 45146548  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  45146547 gatgtgtttcatgtgtctcagttgcggaagtatgtgtatgatgcgtctcatgtgattcaagtggatgatttggaagtaagagataatttga-cgttgaga 45146449  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  45146448 cttggccagttaggattgaggatcgtgaagtgaagcgtttgcgtggcaaggagattgttttggtgaa 45146382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 26 - 285
Target Start/End: Original strand, 21674719 - 21674978
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  21674719 actcctcgttttgttggaccttttgagattattgagaaggttggggttgcagcgtatcggattgcgttaccaccgtctttgtcgaatcttcatgatgtgt 21674818  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21674819 ttcatgtgtctcagttgcggaagtatgtgtatgatgcgtctcatgtgattcaagtggatgatttggaagtaagggatagtttgaccgttgagacttggcc 21674918  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    | ||||||||||||||||  |||||||||||||||  ||||| ||||| |||||||||||    
T  21674919 agttaggattgaggatcgcaaagtgaagcgtttgcatggcaaggagattgttttggtgaa 21674978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 14936437 - 14936172
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||    
T  14936437 aagttgactccttgttttgtgggaccgtttgaggttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttatcgaatcttcatg 14936338  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||     
T  14936337 atgtgtttcatgtgtctcagttgaggaagtatgtgtatgatgcgtcacatgtgatccaagtagatgatttggatgtaagggataatttgaccgttgagat 14936238  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  14936237 ttggccagttagaattgaggatcgtgaagtgaagcgtttgcgtggcaaggagattgttttagtgaa 14936172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 15364030 - 15363765
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||||| | |||||||||||    
T  15364030 aagttgactccttgttttgtgggaccgtttgaggttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttatagaatcttcatg 15363931  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  15363930 atgtgtttcatgtgtctcagttgaggaagtatgtgtatgatgcgtcacatgtgatccaagtagatgatttggatgtaagggataatttgaccgttgagac 15363831  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  15363830 ttggccagttagaattgaggatcgtgaagtgaagcgtttgcgtggcaaggagattgttttagtgaa 15363765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 5e-93
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 12193646 - 12193373
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| ||| |||||  | |||||||||||||||||    
T  12193646 aagttgactcctcgttttgttggaccgtttgagattgttgagaaggttggggttgtagcatatcggattacgttaccacgatatttgtcgaatcttcatg 12193547  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12193546 atgtgtttcatgtgtctcagttgcggaaatatgtgtatgatgcgtctcatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 12193447  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||| || |||| ||||||||| | || ||||||| |||  |||||||| ||||||||||||||||||| ||||    
T  12193446 ttggtcagttagaattgaggattgagaggtgaagcatttaagaggcaaatagatcgttttggtgaaggttattt 12193373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 17923764 - 17923505
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||| ||||||||||| | ||||||||||    
T  17923764 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgcagcgtatcggattgcgttaccaccgcctttgtcgaatttacatgatgtgt 17923665  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||||||| ||||||||  |||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||| |||||||||     
T  17923664 ttcatgtgtctcagttgaggaagtatgtgtatgatgcgtctaatgtgattcaagcggatgatttggaagtaagagataatttaaccgttcagacttggct 17923565  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    | ||| |||||  ||||||||||||||||||||||| | |||||||||||||||||||||    
T  17923564 agttacgattgcagatcgtgaagtgaagcgtttgcgtgacaaagagatcgttttggtgaa 17923505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 13353242 - 13352968
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| |||||||||||||||||||| ||| || |||||||||||||||||||||||| | |||||||| ||| |||||||||||||| |||  | |||    
T  13353242 aaagttgactcctcgttttgttggaccatttaagcttattgagaaggttggggttgtagtgtatcggattgcgttaccaccgtctttgttgaacttacat 13353143  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    || |||||||| || ||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  13353142 gacgtgtttcacgtgtctcagttgaggaagtatgtgtatgatgcgtcccatgtgattcaagtggatgatttggatgtaagagataatttaaccgttgaga 13353043  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||| ||| || ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||| ||||    
T  13353042 cttgaccagttgggattgaggatcgcgaagtgaagcgtttgcgtggcaaagagatcattttggtgagggtgattt 13352968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 4440018 - 4439753
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||| ||| |||| ||| ||||||||||||||| ||| | ||||    
T  4440018 aagttgactcctcgttttattggaccatttgagattattgagaaggttgcagttgtagcgtatcagattgcgttaccaccgtctttgtcaaatttacatg 4439919  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  4439918 atgtgtttcatgtgtctgagttgaggaagtatgtgtatgatgtgtctcatgtgattcaagtggatgatttggaagtaagagataatttgactgtttagac 4439819  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| |  |||||||| |||||| ||||||||||||||| || ||||| ||||| |||||||||||    
T  4439818 ttgggctgttaggatttaggatcatgaagtgaagcgtttacgtggcaaggagattgttttggtgaa 4439753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 7823990 - 7823717
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  7823990 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 7823891  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  7823890 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 7823791  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || ||| ||||||||||||||||| ||  ||||||||||||| ||||| ||||| | |||||| ||||| ||||    
T  7823790 tttgccgattaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgctttggtcaaggtgattt 7823717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 13378788 - 13378535
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||| |||||||||||||||||||  || |||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  13378788 aagttgactccttgttttgttggaccgtttgatgttgttgagacggttggggttgtagtgtatcggatttcgttaccaccgtctttgtcgaatcttcatg 13378689  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||| ||  |||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  13378688 atgtgtttcatgtgtctcaattgaggaagtatgtttatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgaccgttgagac 13378589  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagat 273  Q
    |||||| || ||||||||||| | ||||||||| ||| |||| ||||| |||||    
T  13378588 ttggcccatgaggattgaggaccatgaagtgaaacgtctgcgtggcaaggagat 13378535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 27107954 - 27108227
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  27107954 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 27108053  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  27108054 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 27108153  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || ||| ||||||||||||||||| ||  ||||||||||||| ||||| ||||| | |||||| ||||| ||||    
T  27108154 tttgccgattaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgctttggtcaaggtgattt 27108227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 757 - 983
Target Start/End: Complemental strand, 12978342 - 12978117
Alignment:
Q  757 gtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaa-taaataa 855  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  12978342 gtgattgttttatccgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggactattcattctacccaaaaaaataaataa 12978243  T
Q  856 actcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaag 955  Q
    |||||||         |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  12978242 actcaataaaaaaa--tgacacatgattttaaagtgtcgctttgtcaactcagcaaaaacacgcattttttcattgttagatcccaccaaaaaacaaaag 12978145  T
Q  956 tgaagatattttacgtaatagaggttgg 983  Q
    |||||||||||||  ||||| |||||||    
T  12978144 tgaagatattttatataataaaggttgg 12978117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 12368756 - 12369017
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| |||||||||||||||||| |||||||| | |  |||||||||||||| ||||||||||    
T  12368756 aagttgactcctcgttt-gttggaccgtttgatgttattgataaggttggggttgtagcgtatcggattacattgccaccgtctttgtcaaatcttcatg 12368854  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||| ||||  ||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  12368855 atgtgtttcatgtgtcttagttgaggaagtatgtgcatgatgcgtctcatgtgatccaagtggatgaattggaagtaagagataatttgaccgttgagac 12368954  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||| |||||||||| |||||| |||||||  |||||||||| ||||||||    
T  12368955 ttggccggttaggatttaggatcgtgaggtgaagtgtttgcgttgcaaagagattgttttggt 12369017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 32 - 285
Target Start/End: Complemental strand, 23641595 - 23641344
Alignment:
Q  32 cgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatg 131  Q
    |||||| ||||||||||||||||||| ||||||||||| | ||||||| |||||||| |||  || || || |||||||||||||||||| | ||||||     
T  23641595 cgttttattggaccgtttgagattatagagaaggttggagctgtagcgtatcggattgcgttgccgccatcattgtcgaatcttcatgatttatttcata 23641496  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    |  || ||||  ||||||||||||||||| |||| |  |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | | ||||    
T  23641495 t--cttagttgaggaagtatgtgtatgatttgtctcccgtgattcaagtggatgattttgaagtaagggataatttgactgttgagacttgactagttag 23641398  T
Q  232 gattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||||| ||||| ||||| ||||| ||| |||| |||||||| |||||||||||    
T  23641397 gattgaagatcgggaagtcaagcgcttgagaggaaaagagattgttttggtgaa 23641344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 17115095 - 17115240
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacctt 397  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||| ||||||||||||  ||||||||||    
T  17115095 gagagacagtgcccttttttaaactctaaaacccgtcttgctctctaggtaacctgagtgcatttcatggcctttctcaaactgttttcctcaaaacctt 17115194  T
Q  398 tgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    ||||||||| | ||||| |||| |  |||||| |||||||| ||||    
T  17115195 tgcacaacaagacctgggatttctatttcggttccgcttgtaataa 17115240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 20466869 - 20466673
Alignment:
Q  23 ttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatg 122  Q
    ||||| ||| ||||||||||| | | ||| ||||| ||||  ||||| |  |||||  ||| |||| ||| |||||  || |||||||||||||||  ||    
T  20466869 ttaacgcctagttttgttggatcatatgaaattatagagagagttggagcagtagcatatcagattgcgttaccactatcgttgtcgaatcttcatagtg 20466770  T
Q  123 tgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||| |||||| ||||| || ||||||||||||| |||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20466769 tgtatcatgtgtctcaattgcggaagtatgtgtttgacccgtcacatgtgattcaagtggatgatttggaaggaagggataatttgaccgttgagac 20466673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 443
Target Start/End: Original strand, 17881305 - 17881415
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactg---tttttgtcaaaacctttgcacaacatgtcctggaatttttggttcggtccc 432  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||   ||||| ||||||||||||||||||||||||||  |||| | |||||||| |    
T  17881305 tgctctctaagtaacctgagtgcatttcgtaacctttttcaaactgttttttttatcaaaacctttgcacaacatgtcctgagatttctagttcggtctc 17881404  T
Q  433 gcttgtcataa 443  Q
    |||||| ||||    
T  17881405 gcttgtaataa 17881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 17148251 - 17148384
Alignment:
Q  153 tgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgacc-gttgagacttggccaattaggattgaggatcgtgaagtga 251  Q
    |||||||| | || ||| ||||||||||| ||||||||||| |||||||||||||||||  |||||||||| ||| |||||||||||||||| ||||  |    
T  17148251 tgtatgatttctctcatttgattcaagtgaatgatttggaaataagggataatttgaccatttgagacttgaccagttaggattgaggatcgggaagata 17148350  T
Q  252 agcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| ||  |||| ||| ||||||||||||||||    
T  17148351 agcgcttaagagggaaaaagatcgttttggtgaa 17148384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 336 - 413
Target Start/End: Original strand, 10310233 - 10310311
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctg 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||| ||||||||||||||    
T  10310233 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaaccattttcgatcaaaaccttttcacaacatgtcctg 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 17145451 - 17145550
Alignment:
Q  33 gttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgt 132  Q
    ||||| |||||||||||||||||||| |||| ||||| ||||||||| ||||||||  || ||| || || ||||| |||||||||||||||||||||||    
T  17145451 gttttattggaccgtttgagattatttagaatgttggagttgtagcgtatcggattgtgttaccgccatcgttgtcaaatcttcatgatgtgtttcatgt 17145550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 11229234 - 11229299
Alignment:
Q  144 ggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttga 209  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  11229234 ggaagtatgtgtatgacatgtcacatgtgattcaggtggatgatttggaagtaagggttaatttga 11229299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 636 - 677
Target Start/End: Complemental strand, 12978454 - 12978413
Alignment:
Q  636 atggtgattttatggagaagggtttatgattctaactttcac 677  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12978454 atggtgattttatggagaagggtttatgattctaactttcac 12978413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 20923273 - 20923155
Alignment:
Q  327 aactcgtattgctctctaagtaacctgagtgcatttcgtggcct-ttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggt 424  Q
    |||||||  ||||||||||||||||||| ||||| ||||||||| |||||||||| | || | | |||||||||||||  ||| |||||  |||||| ||    
T  20923273 aactcgtcatgctctctaagtaacctgactgcatctcgtggccttttttcaaactatcttcgattaaaacctttgcacgtcatttcctgagatttttagt 20923174  T
Q  425 tcggtcccgcttgtcataa 443  Q
    |||||| ||||||| ||||    
T  20923173 tcggtctcgcttgtaataa 20923155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 408
Target Start/End: Original strand, 9560668 - 9560738
Alignment:
Q  340 ctctaagtaacctgagtgcatttcgtggcctttttcaaactgttttt--gtcaaaacctttgcacaacatg 408  Q
    ||||||||||||||||||||| |  |||||||||||||||  |||||   |||||||||||||||||||||    
T  9560668 ctctaagtaacctgagtgcatctgctggcctttttcaaaccttttttcgatcaaaacctttgcacaacatg 9560738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 12330859 - 12330787
Alignment:
Q  338 ctctctaagtaacctgagtgcatttcgtggcctttttcaaa-ctgtttttg-tcaaaacctttgcacaacatg 408  Q
    ||||||||||||||||||||||| || ||||| |||||||| || |||| | |||||| ||||||||||||||    
T  12330859 ctctctaagtaacctgagtgcatctcatggcccttttcaaacctcttttcgatcaaaatctttgcacaacatg 12330787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 15125050 - 15125002
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||  ||||| ||||| |||||||||||||||||||||||||||    
T  15125050 aaactcgtcctgctcactaagcaacctgagtgcatttcgtggccttttt 15125002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 17132433 - 17132395
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  17132433 tgctctctaagcaacctgagtgcatttcgtggcattttt 17132395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 14961081 - 14961016
Alignment:
Q  322 tctaaaactcgtattgctctctaagtaacctgagtgcatttcgtgg-cctttttcaaactgttttt 386  Q
    |||||||| |||  ||||||||||| ||||||||||||| | |||| ||||||||||||| |||||    
T  14961081 tctaaaacccgtcctgctctctaagcaacctgagtgcatcttgtggccctttttcaaactcttttt 14961016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 15390553 - 15390488
Alignment:
Q  322 tctaaaactcgtattgctctctaagtaacctgagtgcatttcgtgg-cctttttcaaactgttttt 386  Q
    |||||||| |||  ||||||||||| ||||||||||||| | |||| ||||||||||||| |||||    
T  15390553 tctaaaacccgtcctgctctctaagcaacctgagtgcatcttgtggccctttttcaaactcttttt 15390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-104; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 50331058 - 50331294
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  50331058 taaacatctactcttacattgatcatcacatttacatgtgtcttgacatatacaattgtatctaatatgaaactttaaatcacgattgacacattaacat 50331157  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  50331158 atcttttttaagtgtgaggctttttgcgtctgttatttggtgacataatcgaataaagtaaaacagatgcataacatggttaaatatgtggattgatggt 50331257  T
Q  641 gattttatggagaagggtttatgattctaactttcac 677  Q
    ||||||||||||||| |||||||||||||||||||||    
T  50331258 gattttatggagaagtgtttatgattctaactttcac 50331294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 285
Target Start/End: Original strand, 6712810 - 6713075
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||||||||||||||    
T  6712810 aagttgactcctcgttttgttggtccgtttgagattattgagaaggttggggttgtagcgtatcagattgtgttaccaccgtctttgtcgaatcttcatg 6712909  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||||||||||||  ||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  6712910 atgtgtttcatgtgactcagttgcggaagtatgtgtatgatacgtctcatgtgattcaagtggatgatttggaagtaaaagataatttgaccgttgagac 6713009  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  6713010 ttggccagttaggattgaagatcgcgaagtgaagcgtttgcgtggcaaagagattgttttggtgaa 6713075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 18748396 - 18748127
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||     ||||||| ||| | ||||||||||||||||||| |||    
T  18748396 aaagttgactcctcgttttgttggaccgtttgagattattaagaaggttagggttgta-----tcggattgcgttagcaccgtctttgtcgaatctgcat 18748302  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    | |||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  18748301 ggtgtgtttcatgtgtctcagttgcgaaagtatgtgtatgatgtgtctcatgtgattcaagtgaatgagttggaagtaagggataatttaaccgttgaga 18748202  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| || || ||||||||||| |||||||    
T  18748201 cttggccagttaggattgaggatcgtgaagtgaagcgtttgcgtggcaaggaaattgttttggtgaaagtaattt 18748127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 8274809 - 8275071
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  8274809 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 8274908  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||  || |||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  8274909 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcttctcatgtgattcaagtggatgagttggaagtcagagataatttgaccgttgagac 8275008  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  8275009 ttggccagttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 8275071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 15576480 - 15576218
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| | ||||||  | |||||||||||||||||||||||  | |||||| |||  ||||||||||||||||||||||||     
T  15576480 aagttgactcctcgttttgttgggctgtttgatgtgattgagaaggttggggttgtagcataccggattgcgttgccaccgtctttgtcgaatcttcata 15576381  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  15576380 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagggataatttgacggttgagac 15576281  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  15576280 tttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 15576218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 17192824 - 17192562
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| || |||||  || ||||||||||||||||||||||| | |||||| ||  ||||| ||||||||| ||||||||||    
T  17192824 aagttgactcctcgttttgttgggccttttgatgttgttgagaaggttggggttgtagcgtaccggattgcgctaccactgtctttgtcaaatcttcatg 17192725  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||| ||  ||||||||||||||| |||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  17192724 atgtgtttcatgtgtctcaattgaggaagtatgtgtatgttgtgtctcacgtgattcaagtggatgatttggaagtatgagataatttgaccgttgagac 17192625  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  ||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  17192624 ttggccggttaggattgaggaccgtgaagtgaagcgtttgcgtggcaaggagattgttttggt 17192562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 16743113 - 16743375
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| || |||||  || ||||| ||||||||| |||||||||     
T  16743113 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtattggattgtgttaccactgtctttgtccaatcttcata 16743212  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||| |||||||| ||| ||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  16743213 atgtttttcatgtgtcttagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 16743312  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||| ||| |||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  16743313 tttgccagttatgattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 16743375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 756 - 983
Target Start/End: Original strand, 50331374 - 50331592
Alignment:
Q  756 agtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagtattcagtctacccaaaaaataaataa 855  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  50331374 agtgattgttttgtccgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaagaagtattcattctacccaaaaattaaataa 50331473  T
Q  856 actcaatnnnnnnnnntgacacataattttaaagtgtcgctttgtcaactcagcaaaaacctgcattttttcattgttagatcccaccaaaaagcaaaag 955  Q
    |||||||         |||||||| ||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50331474 actcaat--aaaaaaatgacacatgattt-------tcgctttgtcaactcagcaaaaacatgcattttttcattgttagatcccaccaaaaagcaaaag 50331564  T
Q  956 tgaagatattttacgtaatagaggttgg 983  Q
    ||||| |||||||| ||||||| |||||    
T  50331565 tgaaggtattttacataatagaagttgg 50331592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 6153248 - 6153511
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||||| | |||||||||| |||||||| | |  ||||| ||||| ||||||||||||    
T  6153248 aaagttgactcctcgttttgtcggaccgtttgatgttattgagaaggtcgaggttgtagcgtatcggattgcattgccaccatctttttcgaatcttcat 6153347  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
     ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  6153348 aatgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgatccaagtggatgagttggaagtaagagataatttgaccgttgaga 6153447  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||||||  |||||||||| ||||||||  ||||| ||||||  |||||||||||  |||||||    
T  6153448 cttggccggttaggattgaagatcgtgagatgaagtgtttgcatggcaaagagatttttttggt 6153511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 13975455 - 13975656
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||| ||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  13975455 aagttgactcctcgtttcgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 13975554  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  13975555 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtcattcaagtggatgagttggaagtaagagataatttgacggttgagac 13975654  T
Q  220 tt 221  Q
    ||    
T  13975655 tt 13975656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 33 - 293
Target Start/End: Original strand, 267681 - 267940
Alignment:
Q  33 gttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgt 132  Q
    ||||||||||||||||||||||||||||||||||| |    |||||| |||||||| ||  ||| ||||| ||| ||||||||||| || ||||||||||    
T  267681 gttttgttggaccgtttgagattattgagaaggttagatcagtagcgtatcggattgcgctaccgccgtcgttgccgaatcttcattatttgtttcatgt 267780  T
Q  133 ttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattagg 232  Q
     ||| || |  |||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||| ||| |||||| ||||||| |||||    
T  267781 gtctaagctgaggaagtatgtgtatgattcgtcgcatgtgattcaagtggatgatttggtagtaggggataattttaccattgagaattggccagttagg 267880  T
Q  233 attgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||| ||| | ||||| ||| ||||   ||| ||| |||| |||||||||||||| ||||    
T  267881 attgaagattgggaagttaagtgttt-aaaggaaaatagattgttttggtgaaggtgattt 267940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 299 - 443
Target Start/End: Original strand, 16226867 - 16227009
Alignment:
Q  299 agagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactg-tttttgtcaaaacctt 397  Q
    ||||||| ||||||||||   ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||    
T  16226867 agagatattgcccttttt---actctaaaacatgtcctgctctctaagtaacctgagtgcatttcgtggcctttttcaaaccgttttttatcaaaacatt 16226963  T
Q  398 tgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    ||||||||||||||||  |||| | |||||||| || |||| ||||    
T  16226964 tgcacaacatgtcctgagatttctagttcggtctcgtttgtaataa 16227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 441 - 599
Target Start/End: Original strand, 12744530 - 12744686
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    |||||||||||||||| |||| ||||| |||||| | ||||||| || | |||  ||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  12744530 taaacatctactcttatattggtcatctcatttataagtgtctcaacgtctactcttgcatctaatgtggaactttaaattacaattgatacattaacat 12744629  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    |||| | | || ||||||||  | ||||||| |||| ||||||||||| ||||||||||    
T  12744630 atctctcttaattgtgagac--tatgcgtctatgatgtggtgacataaccaaataaggt 12744686  T

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Target: chr3; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 13908628 - 13908509
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttgg 423  Q
    |||||||||  |||||| |||||||||||||||||| | |||||||||||||||||||||| | |||||||||| |||| ||||||||||  |||| | |    
T  13908628 aaaactcgtcctgctctgtaagtaacctgagtgcatgttgtggcctttttcaaactgttttcgatcaaaaccttcgcactacatgtcctgagatttctag 13908529  T
Q  424 ttcggtcccgcttgtcataa 443  Q
    ||||||||||||||| ||||    
T  13908528 ttcggtcccgcttgtaataa 13908509  T

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Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 21686626 - 21686471
Alignment:
Q  99 cgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaag 198  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||||| |      ||| ||| |||||||| ||||||| |||||||||||    
T  21686626 cgtcgttgtctaatcttcatgatgtgtttcatgtatctcagttgaggaagtatgtgcacagcccgtctcatatgattcaattggatgaattggaagtaag 21686527  T
Q  199 ggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagc 254  Q
    ||||||||||||  |||| ||||||| | ||| |||||| ||||| ||||| ||||    
T  21686526 ggataatttgactattgaaacttggctagttaagattgaagatcgggaagttaagc 21686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 325 - 443
Target Start/End: Original strand, 16224291 - 16224410
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttgg 423  Q
    |||||||||  || |||||||||||| ||||||| | |||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||| | |    
T  16224291 aaaactcgtcctggtctctaagtaacatgagtgcctctcgtggcctttttcaaaccgttttcgatcaaaacctttgcacaacatgtcttgaaatttctag 16224390  T
Q  424 ttcggtcccgcttgtcataa 443  Q
    ||||||  ||||||| ||||    
T  16224391 ttcggtatcgcttgtaataa 16224410  T

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Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 22928408 - 22928287
Alignment:
Q  322 tctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgt-caaaacctttgcacaacatgtcctggaatttt 420  Q
    ||||||||||||  ||||||||||||||| ||||| | |||||||||||||||||||| ||||| |  |||||||||||||||||||||||||  ||||     
T  22928408 tctaaaactcgtcctgctctctaagtaac-tgagtacgtttcgtggcctttttcaaaccgttttcgaacaaaacctttgcacaacatgtcctgagatttc 22928310  T
Q  421 tggttcggtcccgcttgtcataa 443  Q
    | ||||| || ||||||| ||||    
T  22928309 tagttcgttctcgcttgtaataa 22928287  T

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Target: chr3; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 441 - 599
Target Start/End: Complemental strand, 36098033 - 36097879
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||||||||  || |||| ||||| |||||| | ||||||| |||| |||  ||| ||||||| || || ||||||| |||||||||||| ||||||    
T  36098033 taaacatctact--tatattggtcatctcatttataagtgtctcaacatctacttttgcatctaatgtgaaaatttaaattacaattgacacaataacat 36097936  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    |||| | | || ||||||||  | ||||||| |||||||||||||||| ||||||||||    
T  36097935 atctctcttaattgtgagac--tatgcgtctatgatttggtgacataaccaaataaggt 36097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 875 - 983
Target Start/End: Original strand, 12745441 - 12745550
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| | ||| |||||||||||||||||| || ||  |||||| |||| |||||||| | ||| |||||||| |||| ||||||| ||||    
T  12745441 cacataattttaaaatatcgttttgtcaactcagcaaaacacatgattttttttattgctagatccccctaaagagcaaaagggaaggtattttaagtaa 12745540  T
Q  974 tagaggttgg 983  Q
    ||||||||||    
T  12745541 tagaggttgg 12745550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 875 - 982
Target Start/End: Complemental strand, 36097283 - 36097176
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| | ||| ||||||||||| |||||| || |||||||||||||||||||||||| ||||| || ||||||||||  ||||||  |||    
T  36097283 cacataattttaaaatatcgttttgtcaactcggcaaaacacatgcattttttcattgttagatccc-ccaaagagtaaaagtgaaggaattttaaataa 36097185  T
Q  974 tagaggttg 982  Q
     ||||||||    
T  36097184 cagaggttg 36097176  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 780 - 829
Target Start/End: Complemental strand, 36097389 - 36097340
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  36097389 attgaaaataaagtgagttattggtaattttatggtttagttgaaggagt 36097340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 878 - 948
Target Start/End: Complemental strand, 29196048 - 29195977
Alignment:
Q  878 ataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaa 948  Q
    ||||||||||| |||  |||||||||||||  |||| || ||||||||||||||||||||||||||||||||    
T  29196048 ataattttaaaatgttcctttgtcaactcattaaaacacatgcattttttcattgttagatcccaccaaaaa 29195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 486 - 567
Target Start/End: Complemental strand, 14044346 - 14044265
Alignment:
Q  486 acatatacaattgtatctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgc 567  Q
    |||| ||| |||| ||| ||||||||||||||||||||| ||||||||||||||| | | | | |||| |||||||||||||    
T  14044346 acatttactattgcatccaatatggaactttaaatcacacttgacacattaacatctttctctcaagtatgagactttttgc 14044265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 508 - 618
Target Start/End: Original strand, 14249315 - 14249424
Alignment:
Q  508 tggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacaga 607  Q
    ||||||||||| ||||||||||||| |||||||||||     ||||||||||| | |||||| || | | ||||||||||  |||||||||| || ||||    
T  14249315 tggaactttaagtcacaattgacactttaacatatctcccataagtgtgagac-tcttgcgtatgagttctggtgacatagccaaataaggtcaaccaga 14249413  T
Q  608 ggcataacatg 618  Q
    |||| ||||||    
T  14249414 ggcacaacatg 14249424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 16925368 - 16925330
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  16925368 tgctctctaagcaacctgagtgcatttcgtggccttttt 16925330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 829
Target Start/End: Original strand, 12745325 - 12745374
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| || || |||||||||||||||||| ||||||||||||||    
T  12745325 attgaaaataaagtgaattattggtaattttatggcttagttgaaggagt 12745374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 611 - 676
Target Start/End: Complemental strand, 36097572 - 36097507
Alignment:
Q  611 ataacatggttaaataggtggattgatggtgattttatggagaagggtttatgattctaactttca 676  Q
    |||||||| || || ||||||||| |||||||||| ||||| |  ||||||||||||||| |||||    
T  36097572 ataacatgattgaaaaggtggattcatggtgatttcatggaaagaggtttatgattctaaatttca 36097507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 12132579 - 12132845
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||    
T  12132579 aaagttgactcctcgttttgttggaccgttggagattatggagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcctcat 12132678  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12132679 gatgtgtttcatgtgtctcagttgcggaagtatgtgtataatgtgtctcatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 12132778  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| ||| ||| |||||||||| |||||||||||| |||||| ||||| ||||| |||||||||||    
T  12132779 cttgaccagttaagattgaggattgtgaagtgaagcatttgcgtggcaaggagattgttttggtgaa 12132845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 13247746 - 13247484
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  13247746 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 13247647  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  13247646 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgatacaagtggatgatgtggaagtaagggataatttgaccattgagac 13247547  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||| ||  ||||||||||||| ||||| ||||| ||||||||    
T  13247546 ttggccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgttttggt 13247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 14997417 - 14997149
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||     
T  14997417 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcattaccaccgtctttgtcgaatcttcata 14997318  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||| ||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  14997317 atgtgcttcatgtgtctcagttgaggaagtatgtgaatgatgcgtctcatgtgattcaagtggatgaattggaagtaagagataatttgacggttgagac 14997218  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggt 288  Q
    |||||| ||||||||||||||||||||   |||||||||||| ||||||| ||| |||||||| |||||    
T  14997217 ttggccgattaggattgaggatcgtgagtcgaagcgtttgcgtggcaaagggattgttttggtcaaggt 14997149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 15293328 - 15293601
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  15293328 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 15293427  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  15293428 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 15293527  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||  ||  |||||||||||||||| ||  ||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  15293528 tttaccggttaggattgaggatcgcgagttgaagcgtttgcatggcaaagagattgttttggtcaaggtgattt 15293601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 7e-83
Query Start/End: Original strand, 20 - 280
Target Start/End: Original strand, 55375529 - 55375789
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  55375529 aagttgacttctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 55375628  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||| ||| |||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  55375629 atgtgtttcatgtgtctcagttgaggaagtacgtgcatgatgcgtctcatgtgattcaagtggatgaattggaagtaagaaataatttgaccgttgagac 55375728  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttg 280  Q
    ||||||  |||||||||| ||||||||  ||||||||||||| | ||||||||| ||||||    
T  55375729 ttggccggttaggattgatgatcgtgagatgaagcgtttgcgtgacaaagagattgttttg 55375789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 57 - 282
Target Start/End: Original strand, 37955999 - 37956223
Alignment:
Q  57 ttgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgta 156  Q
    |||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||| ||  |||||||||||||    
T  37955999 ttgagaaggttggg-ttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcatgatgtgttttatgtgtctcaattgaggaagtatgtgta 37956097  T
Q  157 tgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgt 256  Q
    ||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  37956098 tgatgcgtcccatgtgattcaagtggatgatatggaagtaagagataatttgaccgttgagacttggccggttaggattgaggatcgcgaagtgaagcgt 37956197  T
Q  257 ttgcgaggcaaagagatcgttttggt 282  Q
    ||||| ||||| || || ||||||||    
T  37956198 ttgcgtggcaaggaaattgttttggt 37956223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 9290936 - 9290674
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||  ||| ||| |||||| ||||||| ||||||||||     
T  9290936 aagttgactcctcgtttcgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcaaattgcgttaccaccatctttgtagaatcttcata 9290837  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||| ||  | ||||||||  |||||| ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  9290836 atgtgtttcatgtgtctcaattgagaaagtatgtacatgatgcgtctcatgtgattcaagtggatgaattggaagtcagagataatttgaccgttgagac 9290737  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  ||||||| |||||||||||  ||||||||||||| |||||||| || ||||||||    
T  9290736 ttggccggttaggatcgaggatcgtgagttgaagcgtttgcgtggcaaagaaattgttttggt 9290674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 16445383 - 16445584
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  16445383 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 16445482  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  16445483 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 16445582  T
Q  220 tt 221  Q
    ||    
T  16445583 tt 16445584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 74 - 282
Target Start/End: Original strand, 12343061 - 12343269
Alignment:
Q  74 gtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtga 173  Q
    |||||| |||| ||| ||| ||||||||||||||| |||||||| |||||||||||||| ||| || | || |||||||||||  ||||||| || ||||    
T  12343061 gtagcgtatcgaattgcgttaccaccgtctttgtcaaatcttcaagatgtgtttcatgtgtcttagctgcgaaagtatgtgtacaatgtgtctcacgtga 12343160  T
Q  174 ttcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagat 273  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||| || ||||||| ||||||||||||||||||    
T  12343161 ttcaagtggatgattcggaagtaagggataatttgaccgttgagacttggtcagttaggatcgaggatcgcgaggtgaagcttttgcgaggcaaagagat 12343260  T
Q  274 cgttttggt 282  Q
    |||||||||    
T  12343261 cgttttggt 12343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 32 - 285
Target Start/End: Complemental strand, 16685343 - 16685090
Alignment:
Q  32 cgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatg 131  Q
    ||||||||||| |||||||||||||| ||||||||||  | | ||  | ||| || | ||| ||| ||||| | || ||||||||||||||||||| |||    
T  16685343 cgttttgttgggccgtttgagattatagagaaggttgaagctatattgtatcagactgcgttaccgccgtcgtcgttgaatcttcatgatgtgttttatg 16685244  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    | ||||||||  ||||||||||||| |||  ||| || ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||    
T  16685243 tatctcagttgaggaagtatgtgtacgatccgtctcacgtgattcaagtggatgatttggaagtacgggataatttgactattgagacttggccagttag 16685144  T
Q  232 gattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    | |||| ||||| ||||| ||||| ||  |||| ||  |||||||||| |||||    
T  16685143 ggttgaagatcgggaagttaagcgcttaagaggaaacaagatcgttttcgtgaa 16685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 13668152 - 13668388
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| |||||||| |||||||||| ||| || ||| ||||| |||| ||| |||| || |||| ||||||||||||||| |||||||||||||||||    
T  13668152 taaacatatactcttatattgatcatctcatctatatgggtctcaacatctactattgcatgtaatgtggaactttaaatcataattgacacattaacat 13668251  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||| | |||| ||||||| |  || | ||||||||| |||||||| |||||||||| |   |||||||||||||||||||| |  ||||||||||||    
T  13668252 atctttctcaagtttgagactctaagcatatgtgatttgatgacataaccaaataaggtcagttagaggcataacatggttaaaca--tggattgatggt 13668349  T
Q  641 gattttatg--gagaagggtttatgattctaactttcac 677  Q
    ||||| |||  ||||| ||||||| |||| |||||||||    
T  13668350 gatttcatggagagaaaggtttataattccaactttcac 13668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 441 - 677
Target Start/End: Original strand, 13681009 - 13681245
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| |||||||| |||||||||| ||| || ||| ||||| |||| ||| |||| || |||| ||||||||||||||| |||||||||||||||||    
T  13681009 taaacatatactcttatattgatcatctcatctatatgggtctcaacatctactattgcatgtaatgtggaactttaaatcataattgacacattaacat 13681108  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||| | |||| ||||||| |  || | ||||||||| |||||||| |||||||||| |   |||||||||||||||||||| |  ||||||||||||    
T  13681109 atctttctcaagtttgagactctaagcatatgtgatttgatgacataaccaaataaggtcagttagaggcataacatggttaaaca--tggattgatggt 13681206  T
Q  641 gattttatg--gagaagggtttatgattctaactttcac 677  Q
    ||||| |||  ||||| ||||||| |||| |||||||||    
T  13681207 gatttcatggagagaaaggtttataattccaactttcac 13681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 441 - 676
Target Start/End: Complemental strand, 13231007 - 13230773
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| |||||||| |||| ||||| |||||| ||||||||| |||| ||| ||||||||| || || || |||||||||||||| |||  |||||||    
T  13231007 taaacatatactcttatattggtcatctcatttatatgtgtctcaacatctactattgtatcttatgtgaaattttaaatcacaattaacattttaacat 13230908  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||  | |||||||||||| | ||| | | |||| |||||| ||||| ||||||||| | |  ||||||||| ||||||||| | |||||||||| ||    
T  13230907 atcttccttaagtgtgagactgtctgcatttctgatatggtgaaataattaaataaggtcagaaggaggcataatatggttaaaca-gtggattgatagt 13230809  T
Q  641 gattttatggagaagggtttatgattctaactttca 676  Q
    ||||| |||||||  ||||||| |||||||||||||    
T  13230808 gatttcatggagagaggtttataattctaactttca 13230773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 11889695 - 11889790
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggttcggtc 430  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||  |||| | ||||||||    
T  11889695 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaaccgttttcgatcaaaacctttacacaacatgtcctgagatttctagttcggtc 11889790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 336 - 443
Target Start/End: Original strand, 12810192 - 12810301
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcc-tttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggttcggtcccg 433  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||| ||||||  ||||||||||||||||||||||||||  |||||| |||||||| ||    
T  12810192 tgctctctaagtaacctgagtgcatctcgttgccctttttcaaaccgttttttatcaaaacctttgcacaacatgtcctgatatttttagttcggtctcg 12810291  T
Q  434 cttgtcataa 443  Q
    ||||| ||||    
T  12810292 cttgtaataa 12810301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 14632924 - 14633067
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacct 396  Q
    |||||| ||||||||||||   | |||||||| ||| |||||||||||||||||||||| ||| | |||||||||||||||| ||||| | |||||||||    
T  14632924 gagagacagtgcccttttt---attctaaaacccgtcttgctctctaagtaacctgagtacatcttgtggcctttttcaaaccgttttcgatcaaaacct 14633020  T
Q  397 ttgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    |||||||||||||| ||  |||| | ||| |||| ||||||| ||||    
T  14633021 ttgcacaacatgtcatgagatttctagtttggtctcgcttgtaataa 14633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 875 - 983
Target Start/End: Complemental strand, 283107 - 282998
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| | ||| |||||||| || |||||| || ||||||||||||||||||||||||  |||| ||||||||||||| |||||||  |||    
T  283107 cacataattttaaaatatcgttttgtcaattcggcaaaacacatgcattttttcattgttagatccccgcaaagagcaaaagtgaaggtattttaaataa 283008  T
Q  974 tagaggttgg 983  Q
    ||||||||||    
T  283007 tagaggttgg 282998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 755 - 827
Target Start/End: Original strand, 13668468 - 13668540
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaagga 827  Q
    |||||| ||||||||  ||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  13668468 tagtgagtgttttgtgggtggaagtattgaaaatagagggagttattgataattttatggtttagttgaagga 13668540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 755 - 827
Target Start/End: Original strand, 13681325 - 13681397
Alignment:
Q  755 tagtgattgttttgttcgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaagga 827  Q
    |||||| ||||||||  ||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  13681325 tagtgagtgttttgtgggtggaagtattgaaaatagagggagttattgataattttatggtttagttgaagga 13681397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 18558618 - 18558686
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttt-tgtcaaaacctttgcaca 403  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||    
T  18558618 tgctctctaagtaacctgagtgcatttcgtggcatttttcaaacagttttcaatcaaaacctttgcaca 18558686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 780 - 829
Target Start/End: Complemental strand, 283213 - 283164
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  283213 attgaaaataaagcgagttattggtagttttatggtttagttgaaggagt 283164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 780 - 829
Target Start/End: Complemental strand, 39976138 - 39976089
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39976138 attgaaaataaagtgagttattggtaattttatggtttagttgaaggagt 39976089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 875 - 982
Target Start/End: Complemental strand, 39976027 - 39975920
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| | ||| ||||||||||| |||||| || |||||||||| ||||||||||| | ||||| ||||||||||||   ||||||  |||    
T  39976027 cacataattttaaaatatcgttttgtcaactcggcaaaacacatgcatttttttattgttagatctc-ccaaagagcaaaagtgaaagaattttaaataa 39975929  T
Q  974 tagaggttg 982  Q
    |||||||||    
T  39975928 tagaggttg 39975920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 500 - 599
Target Start/End: Complemental strand, 283797 - 283700
Alignment:
Q  500 atctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    ||||||| ||||||||||||| ||||| |||||| |||||||||| | | || ||||||||  | ||||||| ||||  |||||||||| ||||||||||    
T  283797 atctaatgtggaactttaaattacaatcgacacaataacatatctctcttaattgtgagac--tatgcgtctatgatccggtgacataaccaaataaggt 283700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 441 - 599
Target Start/End: Complemental strand, 39976768 - 39976614
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||||||||  || |||| ||||| |||||| | ||||||| |||| |||  ||| ||||||| || || ||||||| |||||||||||| ||||||    
T  39976768 taaacatctact--tatattggtcatctcatttataagtgtctcaacatctactcttgcatctaatgtgaaaatttaaattacaattgacacaataacat 39976671  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    |||| | | || ||||||||  | ||||||| ||||  ||||||| || ||||||||||    
T  39976670 atctctcttaattgtgagac--tatgcgtctatgatccggtgacacaaccaaataaggt 39976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 917 - 983
Target Start/End: Complemental strand, 13230522 - 13230457
Alignment:
Q  917 tgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaatagaggttgg 983  Q
    |||||||||||||||||||||| || |||||||| ||||||||  |||||||  |||||||||||||    
T  13230522 tgcattttttcattgttagatctca-caaaaagcgaaagtgaatgtattttaaataatagaggttgg 13230457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 676
Target Start/End: Complemental strand, 39976311 - 39976246
Alignment:
Q  611 ataacatggttaaataggtggattgatggtgattttatggagaagggtttatgattctaactttca 676  Q
    |||||||| ||||| ||||||||| |||||||||| || ||||  ||||||||||||||| |||||    
T  39976311 ataacatgattaaaaaggtggattcatggtgatttcatcgagagaggtttatgattctaaatttca 39976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 360 - 443
Target Start/End: Complemental strand, 10070461 - 10070377
Alignment:
Q  360 tttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    |||| ||| ||||||||||| ||||| | |||||||||||||||||||||||||   |||| | |||||||| ||||||| ||||    
T  10070461 tttcatggtctttttcaaaccgttttcgatcaaaacctttgcacaacatgtcctaagatttctagttcggtctcgcttgtaataa 10070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 780 - 827
Target Start/End: Complemental strand, 13230668 - 13230621
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaagga 827  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||||    
T  13230668 attgaaaatagtgtgagttactggtaattttatggtttagttgtagga 13230621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 3e-91; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 22142284 - 22142546
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||  || ||||| ||||||||||||||||||||    
T  22142284 aagttgactcctcattttgttggaccatttgaggttattgagaaggttggggttgtagcgtatcagattgtgttaccactgtctttgtcgaatcttcatg 22142383  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  22142384 atgtgtttcatgtgtctcagttgaggaagtatgtgtatgatacgtctcatgtgattcaagtggatgatttggaagtaagggataattttcccgttgagac 22142483  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||    
T  22142484 ttggccagttaggattgaggatcgtgaagtgaagcgtttgcgtggcaaggagactgttttggt 22142546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 20831635 - 20831897
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  20831635 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 20831734  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| |||||  |||| ||||||||||| ||||||||    
T  20831735 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggagataagagataatttgacggttgagac 20831834  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||| ||  ||||||||||||| ||||| ||||| ||||||||    
T  20831835 ttggccggttaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgttttggt 20831897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 20914326 - 20914064
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||| ||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||     
T  20914326 aagttgactcctcgttttgttggaccgtttgatgtcattgtgaaggttggggttgtagcgtatcgaattgcgttaccaccgtctttgtcgaatcttcata 20914227  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||  ||||||||  ||||||||||| |||||| ||| || ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||    
T  20914226 atgtgtttcatgcgtctcagttgaggaagtatgtgcatgatgcgtctcacgtgattcaagtggatgaattggatgtaagagataatttgacagttgagac 20914127  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||| | ||||||||||| |||| ||  ||||||||||||| ||||| |||||  |||||||    
T  20914126 ttggctagttaggattgagtatcgcgagttgaagcgtttgcgtggcaaggagattattttggt 20914064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 21202544 - 21202803
Alignment:
Q  34 ttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtt 133  Q
    ||||||| |||| ||||||||| | ||||| ||||| ||||||||| |||||||| ||| ||| || || ||||||||||||| || ||||||||||||     
T  21202544 ttttgttagaccttttgagattgtcgagaaagttggagttgtagcgtatcggattgcgttaccgccatcgttgtcgaatcttcttgttgtgtttcatgtg 21202643  T
Q  134 tctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattagga 233  Q
    ||||| || ||||||||||||||||||||||| || ||||||||||||||  ||||  |||||| |||||||||||||||||||||||| ||| ||||||    
T  21202644 tctcacttgcggaagtatgtgtatgatgtgtctcacgtgattcaagtggacaatttttaagtaaaggataatttgaccgttgagacttgaccagttagga 21202743  T
Q  234 ttgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    |||||||||| |||||||||| | || ||||||| |||||| ||||||||||||| ||||    
T  21202744 ttgaggatcgggaagtgaagcatctgagaggcaaggagatcattttggtgaaggtgattt 21202803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 441 - 674
Target Start/End: Original strand, 43385706 - 43385939
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    ||||||| ||||||||||||| ||||| |||||| ||||||||| |||| |||  |||||| |||| ||||||||||||||||||||||||  |||||||    
T  43385706 taaacatatactcttacattggtcatctcatttatatgtgtctcaacatctactgttgtatttaatgtggaactttaaatcacaattgacattttaacat 43385805  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    |||||  | |||||||||| | | ||||||| |||| |||| |||| | |||||||||| | |  ||||||||||||||||||| |||||||||||||||    
T  43385806 atcttccttaagtgtgagattgtctgcgtctctgatctggtaacatgaccaaataaggtcagaaggaggcataacatggttaaacaggtggattgatggt 43385905  T
Q  641 gattttatggagaagggtttatgattctaacttt 674  Q
    ||||| || ||||  ||||||| |||||||||||    
T  43385906 gatttcattgagagaggtttataattctaacttt 43385939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 46518837 - 46518715
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  46518837 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 46518738  T
Q  120 atgtgtttcatgtttctcagtta 142  Q
    ||||||||||||| |||||||||    
T  46518737 atgtgtttcatgtgtctcagtta 46518715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 500 - 587
Target Start/End: Original strand, 45920090 - 45920177
Alignment:
Q  500 atctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacata 587  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||||  | |||||| |||||||||| ||||||||| ||||||||||    
T  45920090 atctaatgtggaactttaagtcaaaatggacacattaacatatcttccttaagtgtaagactttttgtgtctgtgatatggtgacata 45920177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 500 - 587
Target Start/End: Complemental strand, 49879915 - 49879828
Alignment:
Q  500 atctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacata 587  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||||  | |||||| ||||| |||| || |||||| ||||||||||    
T  49879915 atctaatgtggaactttaagtcaaaatggacacattaacatatcttccttaagtgtaagactctttgtgtttgtgatatggtgacata 49879828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 25401640 - 25401564
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggc-ctttttcaaactgttttt---gtcaaaacctttgcacaacatg 408  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||  |||||    |||||||||||||||||||||    
T  25401640 tgctctctaagtaacctgagtgcatctcgtggctctttttcaaaccattttttcgatcaaaacctttgcacaacatg 25401564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 771 - 829
Target Start/End: Original strand, 43386037 - 43386095
Alignment:
Q  771 cgtggaaacattgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||  |||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  43386037 cgtggaagtattgaaaatagatccagttattggtaattttatggtttagttgcaggagt 43386095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 336 - 405
Target Start/End: Complemental strand, 4599451 - 4599378
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaac----tgtttttgtcaaaacctttgcacaac 405  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||    | ||||||| ||||||||||||||||    
T  4599451 tgctctctaagcaacatgagtgcatctcgtggcctttttcaaactctttttttttgttaaaacctttgcacaac 4599378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 22533931 - 22533973
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaa 378  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  22533931 tgctctctaagtaacctgagtgcatctcgtgacctttttcaaa 22533973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 10159027 - 10159102
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggc-ctttttcaaactgttttt---gtcaaaacctttgcacaacat 407  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||  |||||    | ||||||||||||||||||    
T  10159027 tgctctctaagtaacctgagtgcatctcgtggctctttttcaaacccttttttcgattaaaacctttgcacaacat 10159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 18523172 - 18523245
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatg 408  Q
    |||||||||||||| || ||||||| |||| |||||||||||||  |||| | || ||||||||||||||||||    
T  18523172 tgctctctaagtaaactaagtgcatctcgtcgcctttttcaaacctttttcgatcgaaacctttgcacaacatg 18523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 25400553 - 25400502
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttt-tcaaactgttttt 386  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||| |||||    
T  25400553 tgctctctaagcaacctgagtgcattttgtggccttttctcaaactcttttt 25400502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 21291219 - 21291257
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  21291219 tgctctctaagcaacctgagtgcatttcgtgaccttttt 21291257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 20075398 - 20075435
Alignment:
Q  116 catgatgtgtttcatgtttctcagttacggaagtatgt 153  Q
    |||||||||||||||||||||||| | |||||||||||    
T  20075398 catgatgtgtttcatgtttctcagcttcggaagtatgt 20075435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 33129171 - 33129232
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtggc-ctttttcaaactgttttt 386  Q
    |||||||| |||||||| ||| |||||||||||| ||||||||  ||||||||||| |||||    
T  33129171 aaactcgtcttgctctcgaagcaacctgagtgcacttcgtggcattttttcaaactcttttt 33129232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 170; Significance: 1e-90; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 9065 - 9338
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||    
T  9065 aagttgactcctcgttttgttggaccgtttgaggttattgagaaggttggggttgtagtgtatcggattgcgttaccaccgtctttgtcgaatcttcatg 9164  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||| ||  |||||||||||||||||| ||| ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  9165 atgtgtttcatgtatctcaattgaggaagtatgtgtatgatgcgtctcatgtaatccaagtggatgagttggaagtaagagataatttgaccgttgagac 9264  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  ||||||||||||  |||||||||||||||||||| |||||  |||| |||||||| ||||| ||||    
T  9265 ttggccggttaggattgagggccgtgaagtgaagcgtttgcgtggcaagaagattgttttggtcaaggtgattt 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 166; Significance: 3e-88; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 1084 - 1357
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||     
T  1084 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcata 1183  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||| ||| |||||| ||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  1184 atgtgtttcatgtatctcagttgaggaagtaagtgcatgatgcgtctcatgtgattcaagtggatgaattggaagtaagagataattttaccgttgagac 1283  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  |||||||||||||||||||  ||||||||||||| || |||||||| |||||||| ||||| ||||    
T  1284 ttggccggttaggattgaggatcgtgagttgaagcgtttgcgtggaaaagagattgttttggtcaaggtgattt 1357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 159; Significance: 4e-84; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 44620 - 44882
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  44620 aagttgactcctcgttttgttggaccgtttgatgttattgagcaggttgaggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 44719  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||| ||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  44720 atgtgtttcatgtgtctcaattgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgaattggaagtaagagataatttgaccgttgagac 44819  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||||   |||||||||||||||||||  |||||||| |||| ||||||||||| ||||||||    
T  44820 ttggctggttaggattgaggatcgtgagttgaagcgtatgcgtggcaaagagattgttttggt 44882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 4e-84; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 11211047 - 11211309
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||| ||| |||||| |||||||||||||||||      
T  11211047 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtggcgtatcggattgcgttaccaccatctttgtcgaatcttcaca 11211146  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  11211147 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgaattggaagtaagagataatttgaccgttgagac 11211246  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||| ||  |||||||||||||||||||  ||||||||||||| ||||| ||||| ||||||||    
T  11211247 ttgcccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaggagattgttttggt 11211309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 24581226 - 24580964
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||     
T  24581226 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcagattgcgttaccaccgtctttgtcgaatcttcata 24581127  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||| ||||  ||||||||||| ||||||  || |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  24581126 atgtgtttcatgtgtctgagttgaggaagtatgtgcatgatgcatctcatgtgatccaagtggatgaattggaagtaagggataatttgacggttgagac 24581027  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  24581026 tttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 24580964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 21937541 - 21937814
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| | ||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  21937541 aagttgactcctcgttttgttgggctgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 21937640  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  21937641 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 21937740  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || ||| ||||||||||||||||| ||  ||||||||||||| ||||| ||||| | |||||| ||||| ||||    
T  21937741 tttgccgattaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgctttggtcaaggtgattt 21937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 27011099 - 27010847
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||| |||||||||     
T  27011099 aagttgactcctcgttttgttgg-ccgtttgatgtcattgagaaggttggggttgtagcgtatcagattgcgttaccaccgtctttgtcaaatcttcata 27011001  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  27011000 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 27010901  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagat 273  Q
    ||||||  |||||||||||||||| ||  |||||||||| || ||||| |||||    
T  27010900 ttggccggttaggattgaggatcgagagttgaagcgtttacgtggcaaggagat 27010847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 23503450 - 23503304
Alignment:
Q  28 tcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgttt 127  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  23503450 tcctcgttttgttggaccgtttgatgttattgagaaggttagggttgtagtgtatcggattgcgttaccaccgtctttgtcgaatcttcataatgtgttt 23503351  T
Q  128 catgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgat 174  Q
    ||||| ||||||||  ||||||||||| |||||| ||| ||||||||    
T  23503350 catgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgat 23503304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 36196842 - 36196988
Alignment:
Q  298 gagagatagtgcccttttttaaa-ctctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacct 396  Q
    |||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||  |||||||||    
T  36196842 gagagacagtacccttttttaaaactctaaaactcgtcttgctctttaagtaacctgagtgcatttcgtggcctttttcaagttgttttcctcaaaacct 36196941  T
Q  397 ttgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    |||||||||||||||||  |||| | |||||||||||||||| ||||    
T  36196942 ttgcacaacatgtcctgtgatttctagttcggtcccgcttgtaataa 36196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 313 - 443
Target Start/End: Complemental strand, 25769667 - 25769536
Alignment:
Q  313 tttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgt-ttttgtcaaaacctttgcacaacatgtcc 411  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  25769667 tttttaaactctaaaacccgtcttgctctctaagtaacctgcgtgcatttcgtggcctttttcaaactgttttttctcaaaacctttggacaacatgtcc 25769568  T
Q  412 tggaatttttggttcggtcccgcttgtcataa 443  Q
    ||| |||| | |||||||||| ||||| ||||    
T  25769567 tgggatttctagttcggtccctcttgtaataa 25769536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 22011027 - 22010882
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaa-ctcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacc 395  Q
    |||||||||||||||||||||  |||||||| | |||  ||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22011027 gagagatagtgccctttttta--ctctaaaaacccgtcctgccctctaagtaacctgagtgcattttgtggcctttttcaaaccgtttttgatcaaaacc 22010930  T
Q  396 tttgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    ||||||||||||||||||  |||| | |||||||| ||||||| ||||    
T  22010929 tttgcacaacatgtcctgagatttctagttcggtctcgcttgtaataa 22010882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 34 - 226
Target Start/End: Complemental strand, 24516560 - 24516369
Alignment:
Q  34 ttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtt 133  Q
    ||||||| |||||||||||||| ||||||||||||| |||||| ||  |||| || ||| | | |  || || |||||||||||||||| ||||| |||     
T  24516560 ttttgtttgaccgtttgagattgttgagaaggttggagttgtaacgtgtcgg-ttgcgttatcgctatcgttatcgaatcttcatgatgcgtttcttgtg 24516462  T
Q  134 tctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcca 226  Q
    ||  |||||||||||||||||||||||| ||| || |||||||||||||||||| | |||||||  |||||| ||||| ||||||||||||||    
T  24516461 tcctagttacggaagtatgtgtatgatgcgtctcacgtgattcaagtggatgatcttgaagtaaacgataatctgacctttgagacttggcca 24516369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 875 - 983
Target Start/End: Original strand, 33012824 - 33012933
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| | ||| |||||||| || |||||| || ||||||||||||||||||||||||  |||| ||||||||||||| |||||||  |||    
T  33012824 cacataattttaaaatatcgttttgtcaattcggcaaaacacatgcattttttcattgttagatccccgcaaagagcaaaagtgaaggtattttaaataa 33012923  T
Q  974 tagaggttgg 983  Q
    ||||||||||    
T  33012924 tagaggttgg 33012933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 890 - 981
Target Start/End: Original strand, 38012566 - 38012658
Alignment:
Q  890 tgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaatagaggtt 981  Q
    |||| ||||||||||||| ||||| || ||||||||| ||||||||| |||||||||||||||||||||||  |||||||  |||||||||||    
T  38012566 tgtcactttgtcaactcatcaaaacacatgcatttttccattgttagttcccaccaaaaagcaaaagtgaatgtattttaaataatagaggtt 38012658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 16066183 - 16066263
Alignment:
Q  163 gtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcg 243  Q
    |||||||||||||||| || ||||||||||||| ||||||||| |||| ||||||||||||||  | |||||||| |||||    
T  16066183 gtcacatgtgattcaaatgaatgatttggaagttagggataatatgacagttgagacttggccggtgaggattgaagatcg 16066263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 22969662 - 22969730
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcaca 403  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||    
T  22969662 tgctctctaggtaacctgagtgcacttcgtggcctttttcaaaccgttttcgatcaaaacctttgcaca 22969730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 500 - 599
Target Start/End: Original strand, 33012141 - 33012238
Alignment:
Q  500 atctaatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggt 599  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||| | | || ||||||||  |  |||||| ||||| |||||||||| ||||||||||    
T  33012141 atctaatgtggaactttaaattacaattgacacaataacatatctctcttaattgtgagac--tacgcgtctatgattcggtgacataaccaaataaggt 33012238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 676
Target Start/End: Original strand, 33012544 - 33012609
Alignment:
Q  611 ataacatggttaaataggtggattgatggtgattttatggagaagggtttatgattctaactttca 676  Q
    |||||||| |||||  |||||||||||| |||||| |||||||  ||||||||||||||| |||||    
T  33012544 ataacatgattaaaatggtggattgatgttgatttcatggagagaggtttatgattctaaatttca 33012609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 829
Target Start/End: Original strand, 33012718 - 33012767
Alignment:
Q  780 attgaaaatagagcgagttattggtaattttatggtttagttgaaggagt 829  Q
    |||||||||| || |||||||| ||| |||||||||||||||||||||||    
T  33012718 attgaaaataaagtgagttattagtagttttatggtttagttgaaggagt 33012767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 20547259 - 20547211
Alignment:
Q  326 aaactcgtattgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||  |||| |||||| |||||||||||||||||||||||||||    
T  20547259 aaactcgtcctgctttctaagcaacctgagtgcatttcgtggccttttt 20547211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 25369074 - 25369023
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcc-tttttcaaactgttttt 386  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  25369074 tgctctctaagcaacctaagtgcatttcgtggccgtttttcaaacttttttt 25369023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 495 - 540
Target Start/End: Complemental strand, 20966168 - 20966123
Alignment:
Q  495 attgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    |||| ||| ||| ||||||||||||||||| |||||||||||||||    
T  20966168 attgcatccaatgtggaactttaaatcacacttgacacattaacat 20966123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 158; Significance: 2e-83; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 10788 - 10515
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||  || ||||||||||||||||||||||||||    
T  10788 aagttgacacctcgttttgttgggccgtttgagattgttgagaaggttggagttgtagcgtatcggattgtgttaccaccgtctttgtcgaatcttcatg 10689  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| |||||||| ||||||||||| ||  ||| ||| |  ||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  10688 atgtgtttcatgtgtctcagttgcggaagtatgtatacaatgcgtctcgcgtgattcaagtggatgatttggaggtatgagataatttgaccgttgagac 10589  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||| |||| ||||||||||| || |||||||||||| |||||||||| ||||||||| ||||||| ||||    
T  10588 ttggccagttagaattgaggatcgcgaggtgaagcgtttgtgaggcaaagatatcgttttgatgaaggtgattt 10515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 158; Significance: 2e-83; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 78803 - 79076
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||| |||||||| ||| |||||||||| |||| |||||||||     
T  78803 aagttgactcctcgttttgttggacggtttgatgttatagagaaggttggggttgtagcgtatcggattgcgttaccaccgtctatgtcaaatcttcata 78902  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  78903 atgtgtttcatgtgtctcagttgaggaagtatgtatatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgaccgttgagac 79002  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  ||||||| || ||||||||  ||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  79003 ttggccggttaggatagaagatcgtgagatgaagcgtttgcgtggcaaagagattgttttggtcaaggtgattt 79076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 155; Significance: 1e-81; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 1228 - 1490
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||    
T  1228 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcatg 1327  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||| || |||| ||||||||  |||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  1328 atgtgattaatgtatctcagttgaggaagtatgtgtatgatgcgtctcatgtgatccaagtggatgaattggaagtaagagataatttgaccgttgagac 1427  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||  |  ||||||||||||| | |||||||||||||||||  ||||| ||||| ||||||||    
T  1428 ttgttcggttaggattgaggaccatgaagtgaagcgtttgcatggcaaggagattgttttggt 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 155; Significance: 1e-81; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 46286 - 46024
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||||||     
T  46286 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggctgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 46187  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||| || || ||||||||||| ||||||||||| ||||||||    
T  46186 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtagaggaattggaagtaagagataatttgacggttgagac 46087  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  ||||||||||||| ||||| ||||| ||||||||    
T  46086 ttggccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaggagattgttttggt 46024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 155; Significance: 1e-81; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 19 - 285
Target Start/End: Complemental strand, 14093 - 13828
Alignment:
Q  19 aaagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| |||||||||||||||||||||||||    
T  14093 aaagttgactcctcgttttgttggaccgtttgagattattgaaaaggttggggttatagcgtatcagattgcgttaccaccgtctttgtcgaatcttcat 13994  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
    |||||||||| ||| ||  |||| ||| ||||||||||||||| ||| |||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  13993 gatgtgtttc-tgtgtcctagttgcggcagtatgtgtatgatgcgtctcatgtgattcaagtggataaattggaagtaagagataatttgaccgttgaga 13895  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    |||| | | |||||||||||||||  ||||||||||||||| | || ||| ||||||||||||||||    
T  13894 cttgactagttaggattgaggatcacgaagtgaagcgtttgtgtggtaaatagatcgttttggtgaa 13828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 155; Significance: 1e-81; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 24012 - 23750
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||| |||||||| ||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  24012 aagttgactccttgttttgttagaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 23913  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||  |||||| ||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  23912 atgtgtttcatgtgtctcagttgaggaagtatgttcatgatgcgtctcatgtgattcaagtggatgaattggaagtaagagatattttgaccgttgagac 23813  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  |||||  |||||| ||||||||||| ||||||||    
T  23812 ttggccggttaggattgaggatcgtgagatgaagtatttgcgtggcaaagagattgttttggt 23750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 231690 - 231444
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| || ||||||||||||||||||| ||||||| || | |||||| | || | |||| ||| || | ||| ||||||||||||||||||||||||||    
T  231690 aagttgacacctcgttttgttggaccgtatgagattgttaaaaaggttagagtggcagcgtatcagaatgcgttaccaccgtctttgtcgaatcttcatg 231591  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| | |||||| ||||||||||||||||||| ||| || | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  231590 atgtgtttcatgtgtttcagttgcggaagtatgtgtatgatgcgtctcacgcgattcaattggatgatttggaagtaagggataatttgaccgttgagac 231491  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggca 266  Q
    || |||| |||||||||| ||||  ||||||||||||||||||||||    
T  231490 tttgccagttaggattgaagatcacgaagtgaagcgtttgcgaggca 231444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 151; Significance: 3e-79; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 98147 - 97885
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||     
T  98147 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgttgaatcttcata 98048  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||| |||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  98047 atgtgtttcatgtgtctcagttgaggaattatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 97948  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    || |||  |||||||||||||| ||||  ||||||||||||| ||||||||||| ||||||||    
T  97947 tttgccggttaggattgaggattgtgagttgaagcgtttgcgtggcaaagagattgttttggt 97885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 20 - 279
Target Start/End: Original strand, 23640 - 23899
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||| | |||| |||||||||||||  ||||||||||||||||| |||||||| |||||||| ||| |||||| ||||||||||||||||||     
T  23640 aagttgactccccattttattggaccgtttgatgttattgagaaggttgggattgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcata 23739  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  |||||| |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  23740 atgtgtttcatgtgtctcagttgaggaagtttgtgcatgatgtgtctcatgtgattcaagtggatgagttggaagtaagagataatatgaccgttgagac 23839  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgtttt 279  Q
    ||||||  |||| ||||| ||||||||  |||||||||||||||||||| |||| |||||    
T  23840 ttggccggttagaattgacgatcgtgagatgaagcgtttgcgaggcaaaaagattgtttt 23899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 150; Significance: 1e-78; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 40390 - 40117
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||     
T  40390 aagttgactcctcgttttgttgggccgtttgatgtcattgagaaggttggggttgtagcgtaccggattgcgttgccaccgtctttgtcgaatcttcata 40291  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  40290 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgacggttgagac 40191  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    || ||| ||||||||||||||||| ||  ||||||||||||| ||||| ||||| | |||||| ||||| ||||    
T  40190 tttgccgattaggattgaggatcgcgagttgaagcgtttgcgtggcaaggagattgctttggtcaaggtgattt 40117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 147; Significance: 6e-77; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 560 - 822
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||||||| |||||||  | |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  560 aagttgactcctcgttttgttggaacgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 659  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||| |||||||| ||||||||| ||||||||||  |||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  660 atgtatttcatgtgtctcagttaaggaagtatgttcatgatgtgtctcatgtggttcaagtggatgaattggaagtaagagataatttgacggttgagac 759  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
     | |||  ||||||| |||||||||||  ||||||||||||| ||||| ||||| ||||||||    
T  760 cttgccggttaggatcgaggatcgtgagttgaagcgtttgcgtggcaaggagattgttttggt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 147; Significance: 6e-77; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 23526 - 23264
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||| ||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||     
T  23526 aagttgactgctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtagcgtatcggattgcgttaccaccttctttgtcgaatcttcata 23427  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  23426 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagttgatgaattggaaataagggataatttgacagttgagac 23327  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||| | ||  ||||||||||||| ||||||| ||| ||||||||    
T  23326 ttggccggttaggattgaggatggagagttgaagcgtttgcgtggcaaagggattgttttggt 23264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 507 - 779
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||| ||||||||||||||||||||  || |||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||    
T  507 aagttgactccccgttttgttggaccgtttgatgttgttgagaaggttggggtcgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcatg 606  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||| |||||||| | ||||||  |||||||||||||||||| ||| ||||||||||||||||| || ||| ||||||| ||||||||||||||||||||    
T  607 atgtatttcatgtgtttcagttgaggaagtatgtgtatgatgcgtctcatgtgattcaagtggacgaattgaaagtaagagataatttgaccgttgagac 706  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  |||||||||||||||||||| |||||||   ||| ||||| ||||| |||||||| || |||||||    
T  707 ttggccggttaggattgaggatcgtgaactgaagcg-ccgcgtggcaaggagattgttttggtcaaagtaattt 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 13040 - 12767
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||| |||| || ||| |  | ||||||| |||| | ||||||||| |||||||||||| |||||||||||||||||||||||||     
T  13040 aagttgactcctcgtttttttggtcctttttatgtcattgagatggtttgtgttgtagcgtatcggatttcgttaccaccgtctttgtcgaatcttcata 12941  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12940 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgagttggaagtaagagataatttgaccgttgagac 12841  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  |||||||||||||||||||  ||||||||||  | ||||||||||| |||||||| ||||| ||||    
T  12840 ttggccggttaggattgaggatcgtgagatgaagcgtttctgtggcaaagagattgttttggtcaaggtgattt 12767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 106747 - 107020
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||| ||| |||||||||||||| ||||||||||     
T  106747 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcagattgcgttaccaccgtctttgttgaatcttcata 106846  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| ||| || ||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  106847 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgttgcgtctcatgtgattcaagtggatgaattggaagtaagagataacttgaccgttgagac 106946  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  ||| ||||||||||| |||  |||| ||||| || ||||| ||||| |||||||| ||||| ||||    
T  106947 ttggccggttatgattgaggatcatgagatgaatcgtttacgtggcaaggagattgttttggtcaaggtgattt 107020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 143; Significance: 1e-74; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 14789 - 14527
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||| | |||||||||||||||||||    
T  14789 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccatcatctttgtcgaatcttcatg 14690  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| |||||||| ||||||||||| |||||||| || |||||||||| |||||||||    
T  14689 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgatacaagtggatgaattggaagtgagagataatttgatcgttgagac 14590  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    |||||   ||||||| |||||||||||  ||||| || |||| ||||| ||||| ||||||||    
T  14589 ttggcaggttaggatcgaggatcgtgagttgaagtgtatgcgtggcaaggagattgttttggt 14527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 43664 - 43408
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||||||||||||||||| |||||  |||||||||||||| ||||||||| | |||||||| ||| |||||| |||||||||||||||||| ||||||    
T  43664 actcctcgttttgttggaccatttgatgttattgagaaggttagggttgtagtgtatcggattgcgttaccaccatctttgtcgaatcttcataatgtgt 43565  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||||||| ||||||||  ||||||| ||| |||||| | | |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||    
T  43564 ttcatgtgtctcagttgaggaagtacgtgcatgatgcgcctcatgtgattcaagtggatgaattggaagtaagagataatttgacggttgagactttgcc 43465  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      |||||||||||||||||||  |||||| |||||| ||||||||||| ||||||||    
T  43464 ggttaggattgaggatcgtgagttgaagcatttgcgtggcaaagagattgttttggt 43408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 143; Significance: 1e-74; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 13383 - 13121
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||||||||   ||||||  || |||||| |||||||||||||||| ||| ||||  || ||||||||||||||||||||||||||    
T  13383 aagttgactcctcgttttgttgggttgtttgatgttgttgagagggttggggttgtagcgtatcagattgtgttaccaccgtctttgtcgaatcttcatg 13284  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||||||||||  || |||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||    
T  13283 atgtgtttcatgtatctcagttgaggaagtatgtgtatgatgcttctcatgtgatccaagtggatgagttggaagtaagagataatttgactgttgaaac 13184  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  ||||||||||||| |||||||||||||||||||  ||||||||||| ||||||||    
T  13183 ttggccggttaggattgaggaccgtgaagtgaagcgtttgcatggcaaagagattgttttggt 13121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 6442 - 6333
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||||||||| ||||||||||| ||||||||  || |||||| |||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||    
T  6442 aagttaactccacgttttgttgggccgtttgatgttgttgagagggttggggttgtagcgtatcggattgcgttaccactgtctttgtcgaatcttcatg 6343  T
Q  120 atgtgtttca 129  Q
    ||||||||||    
T  6342 atgtgtttca 6333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 141; Significance: 2e-73; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 26 - 282
Target Start/End: Original strand, 4124 - 4380
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||||||||||||||||| |||||  |||||||||||||| ||||||||| |  ||||||| |||  ||||||||||||| |||||||||| ||||||    
T  4124 actcctcgttttgttggaccatttgatgttattgagaaggttagggttgtagagtgtcggattgcgttgccaccgtctttgtagaatcttcataatgtgt 4223  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||||||| ||||||||  ||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  4224 ttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgtgatccaagtggatgaattggaagtaagagataatttgaccgttgagacttggcc 4323  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      |||||||||||||||||||  ||||||||||||| ||||| | ||| ||||||||    
T  4324 ggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaggtgattgttttggt 4380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 135; Significance: 9e-70; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 5867 - 5622
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||||||    
T  5867 actccttgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcatgatgtgt 5768  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||           |||  |||||||||||||||||| ||| |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||     
T  5767 tt-----------gttgaggaagtatgtgtatgatgcgtcccatgtgattcaagtggatgaattcgaagtaagagataatttgaccgttgagacttggcg 5679  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      ||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||    
T  5678 ggttaggattgaggatcgtgaagtgaagcttttgcgtgacaaagagattgttttggt 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 10481 - 10236
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||||||    
T  10481 actccttgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcatgatgtgt 10382  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||           |||  |||||||||||||||||| ||| |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||     
T  10381 tt-----------gttgaggaagtatgtgtatgatgcgtcccatgtgattcaagtggatgaattcgaagtaagagataatttgaccgttgagacttggcg 10293  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      ||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||    
T  10292 ggttaggattgaggatcgtgaagtgaagcttttgcgtgacaaagagattgttttggt 10236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 135; Significance: 9e-70; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 8476 - 8231
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||||||    
T  8476 actccttgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccatctttgtcgaatcttcatgatgtgt 8377  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    ||           |||  |||||||||||||||||| ||| |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||     
T  8376 tt-----------gttgaggaagtatgtgtatgatgcgtcccatgtgattcaagtggatgaattcgaagtaagagataatttgaccgttgagacttggcg 8288  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
      ||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||    
T  8287 ggttaggattgaggatcgtgaagtgaagcttttgcgtgacaaagagattgttttggt 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 135; Significance: 9e-70; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 16345 - 16606
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||||||| |||||||||||||  ||||||| ||||| |||||||||||| |||||| |  || |||||||||||||| |||||||||||    
T  16345 aagttgactcctcgttttattggaccgtttgatgttattgaaaaggt-ggggttgtagcgtatcggagtgtgttaccaccgtctttgttgaatcttcatg 16443  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||| ||| ||| ||||  ||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  16444 atgtgtttcgtgtgtcttagttgaggaagtatgtgcatgatgcgtctcatgtgattcaagtggatgatgtggaagtaagagataatttgaccgttgagac 16543  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  ||| ||||||||  ||||| ||||| ||||||||    
T  16544 ttggccggttaggattgaggatcgtgagttgatgcgtttgcatggcaaggagattgttttggt 16606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 135; Significance: 9e-70; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 10483 - 10745
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| || |||||  |||||||||| ||||||||||||||| |||| ||| ||| |||||| |||||||||||| ||||||    
T  10483 aagttgactcctcgttttgttgggccatttgatgttattgagaaagttggggttgtagcgtatcgaattgcgttaccaccatctttgtcgaatattcatg 10582  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| || ||| | | |||||||| ||||||||||| | |||||| || ||||||||||||||||||||    
T  10583 atgtgtttcatgtgtctcagttgaggaagtatgtgcatcatgcggctcatgtgatccaagtggatgaatcggaagtgagagataatttgaccgttgagac 10682  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||| |||| |||||||| ||||| ||||| ||||||||    
T  10683 ttggccggttaggattgaggatcgtgaactgaaacgtttgcgtggcaaggagattgttttggt 10745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 134; Significance: 4e-69; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 26 - 279
Target Start/End: Complemental strand, 9113 - 8860
Alignment:
Q  26 actcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgt 125  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  9113 actcctcgttttgttggaccgtttgatgtcgtagagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgttgaatcttcatgatgtgt 9014  T
Q  126 ttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggcc 225  Q
    |||| || ||| ||||  ||||||||||||| |||| ||| ||| ||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||    
T  9013 ttcacgtgtcttagttgaggaagtatgtgtacgatgcgtctcatatgattcaagtggatgaactggaagtaagagataatttgaccgctgagacttggcc 8914  T
Q  226 aattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgtttt 279  Q
      ||||||||||||| ||||||||||| ||| |||| ||||| ||||| |||||    
T  8913 ggttaggattgaggaccgtgaagtgaaacgtctgcgtggcaaggagattgtttt 8860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 132; Significance: 5e-68; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 7984 - 8247
Alignment:
Q  20 aagttaactcctcgttttgttgg-accgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcat 118  Q
    ||||| ||||||||||||||||| |||||||||  | ||||| |||||||||||||||||| | || ||| |||  ||||||||||||||||||||||||    
T  7984 aagttgactcctcgttttgttggtaccgtttgatgtgattgaaaaggttggggttgtagcgtaccgaattgcgttgccaccgtctttgtcgaatcttcat 8083  T
Q  119 gatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgaga 218  Q
     ||||||||||||  ||| ||||  ||||||||||| |||||| ||| |||||| ||||||||||||| |||||||||||| |||||||||| |||||||    
T  8084 aatgtgtttcatgggtcttagttgaggaagtatgtgcatgatgcgtctcatgtggttcaagtggatgaattggaagtaaggcataatttgacggttgaga 8183  T
Q  219 cttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||| |||  |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  8184 ctttgccggttaggattgaggatcgtgagttgaagcgtttgcgtggcaaagagattgttttggt 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 131; Significance: 2e-67; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 56 - 282
Target Start/End: Original strand, 5370 - 5595
Alignment:
Q  56 attgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgt 155  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||     
T  5370 attgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcataatgtgtttcatgtgtctcagttgaggaagtatgtgc 5469  T
Q  156 atgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcg 255  Q
    ||||||  || |||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||| | ||||| |    
T  5470 atgatgcctctcatgtgattcaagtggatgaattggaagtaagagataatttgatggttgagacttggccggttaggattgaggatcgtg-actgaagag 5568  T
Q  256 tttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||| ||||||||    
T  5569 tttgcgtagcaaagagattgttttggt 5595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 14911 - 15014
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||||| ||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  14911 aagttgactcctcgttt-gttggactgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 15009  T
Q  120 atgtg 124  Q
    |||||    
T  15010 atgtg 15014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 130; Significance: 9e-67; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 122124 - 122397
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||| |||||||||||| ||| |  | |||||||||||||||| ||||||| || ||||| ||| |||||||||||||||||||||||||     
T  122124 aagttgactcctcattttgttggaccatttaatgtaattgagaaggttggggatgtagcgtataggattgcgttaccaccgtctttgtcgaatcttcata 122223  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| ||||| |||| |||| ||| ||||| |||||| |||||||||| ||||||||||||||||||||    
T  122224 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatttgtctcatgggatacaagtagatgatgtggaagtaagagataatttgaccgttgagac 122323  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  |||||||||||  ||||||   |||||||||||| ||||| ||||| |||||||| ||||| ||||    
T  122324 ttggccggttaggattgagtgtcgtgactggaagcgtttgcgtggcaaggagattgttttggtcaaggtgattt 122397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 126; Significance: 2e-64; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 69 - 282
Target Start/End: Complemental strand, 1269 - 1056
Alignment:
Q  69 gggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcaca 168  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||| |||||| ||| ||    
T  1269 gggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcataatgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctca 1170  T
Q  169 tgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaa 268  Q
    |||||| ||||||||||| ||||||||||| |||||||||||  ||||||||| |||  |||||||||||||||||||  ||||||||||||| ||||||    
T  1169 tgtgatccaagtggatgagttggaagtaagagataatttgacttttgagactttgccggttaggattgaggatcgtgatttgaagcgtttgcgtggcaaa 1070  T
Q  269 gagatcgttttggt 282  Q
    ||||| ||||||||    
T  1069 gagattgttttggt 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 125; Significance: 8e-64; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 14262 - 14030
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| ||||||||  | || ||||||||||||||||||||| ||||| || ||| ||||| ||||||| | ||||||||||    
T  14262 aagttgactcctcgttttgttgggccgtttgatgtcatcgagaaggttggggttgtagcgtatcgggttgcgttaccacagtctttggcaaatcttcatg 14163  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||| ||||   ||||||||||||||||| ||| |||||||||||||  |||||||||||||||||| ||||||| |||||||||||    
T  14162 atgtgtttcatgtgtcttagttgaagaagtatgtgtatgatgcgtctcatgtgattcaagcagatgatttggaagtaaggaataatttaaccgttgagac 14063  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaa 252  Q
    ||||||  |||||||||||||||| ||||||||    
T  14062 ttggccggttaggattgaggatcgcgaagtgaa 14030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 125; Significance: 8e-64; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 20 - 282
Target Start/End: Complemental strand, 22826 - 22571
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||       |||| | | |||||| ||| ||||||||||||||     
T  22826 aagttgactcctcgttttgttggaccgtttgatgtcattgagaaggttggggttgtag-------gattgcattaccaccatctctgtcgaatcttcata 22734  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  22733 atgtgtttcatgtgtctcagttgaggaagtatgtgcatgatgcgtctcatgttattcaagtggatgagttggaagtaagagataatttgactgttgagac 22634  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||| ||||||||  ||||||||||||| ||||| ||||| ||||||||    
T  22633 ttggccggttaggattgaagatcgtgagatgaagcgtttgcgtggcaaggagattgttttggt 22571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 124; Significance: 3e-63; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 98 - 293
Target Start/End: Complemental strand, 78403 - 78208
Alignment:
Q  98 ccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaa 197  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||  |||||||||||||||||||||||||||    
T  78403 ccgtcgttgtcgaatcttcatgatgtgtttcatgtgtctcagttgcggaagtacgtgtatgatgtgtctcacatgattcaagtggatgatttggaagtaa 78304  T
Q  198 gggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||||||||||||| | |||||  || |||||||||||||||| |||||||||||| || ||||||||||||| ||||||| |||||| ||||    
T  78303 gggataatttgaccgtttatacttgagcagttaggattgaggatcgggaagtgaagcgtatgagaggcaaagagattgttttggggaaggtgattt 78208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 120; Significance: 8e-61; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 14655 - 14488
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  14655 aagttgactcctcgttttgttggaccgtttgaggttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcatg 14556  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgat 187  Q
    ||||||||||||| ||||||||  |||||||| ||||||||| | | |||||||||||||||||||||    
T  14555 atgtgtttcatgtgtctcagttgaggaagtatatgtatgatgcgactcatgtgattcaagtggatgat 14488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 7510 - 7411
Alignment:
Q  182 gatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttgg 281  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||    
T  7510 gatgattttgaagcaagggataatttgacagttgagacttggccagttaggattgaggaacgtgaagtgaagcgtttgcgtggcaaggagattgttttgg 7411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 118; Significance: 1e-59; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 4049 - 4295
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||     
T  4049 aagttgactcctcgtttagttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcattaccaccgtctttgtcgaatcttcata 4148  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    ||||||||||||| |||||||||                ||| ||| |||||| ||||||||||| | ||||||||||| ||||||||||||||||||||    
T  4149 atgtgtttcatgtgtctcagtta----------------atgcgtctcatgtggttcaagtggataaattggaagtaagagataatttgaccgttgagac 4232  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||  |||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||    
T  4233 ttggccggttaggattgaggatcgtgagatgaagcggttgcgtggcaaagagattgttttggt 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 118; Significance: 1e-59; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 33169 - 33441
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||  ||||||  | | |||||||||||||||||||||  ||| |||| ||| |||||||||||||||||||||||||     
T  33169 aagttgactcctcgttttgttggattgtttgatgtaactgagaaggttggggttgtagct-atcagattgcgttaccaccgtctttgtcgaatcttcata 33267  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagac 219  Q
    |||||| |||||| ||||||||  ||||||||||  | |||| ||| |||||| ||||||||||||| ||||||||||| |||||||||||  |||||||    
T  33268 atgtgtatcatgtgtctcagttgaggaagtatgtacacgatgcgtctcatgtggttcaagtggatgaattggaagtaagagataatttgacgattgagac 33367  T
Q  220 ttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggtaattt 293  Q
    ||||||  ||||||||||| |||| ||  ||||||||||||| ||||| ||||| |||||||| ||||| ||||    
T  33368 ttggccggttaggattgagaatcgagagttgaagcgtttgcgtggcaaggagattgttttggtcaaggtgattt 33441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 115; Significance: 8e-58; HSPs: 2)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 116 - 282
Target Start/End: Complemental strand, 3152 - 2986
Alignment:
Q  116 catgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttg 215  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  3152 catgatgtgtttcatgtgtctcagttgaggaagtatgtgtatgatgcgtctcatgtgattcaagtggatgatttggaagtaagagataatttggccgttg 3053  T
Q  216 agacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||| || |||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  3052 agattttgccagttaggattgaggaccgtgaagtgaagcgtttgcgtggcaaagagattgttttggt 2986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 3291 - 3170
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |  ||||||||||||||||||||||| |||||||| | | |||||| |||||||||||||||||||    
T  3291 aagttgactcctcgttttgttggaccgtttgatgtcgttgagaaggttggggttgtagcgtatcggattgcattaccaccatctttgtcgaatcttcatg 3192  T
Q  120 atgtgtttcatgtttctcagtt 141  Q
    ||||||||||||| ||||||||    
T  3191 atgtgtttcatgtgtctcagtt 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 101; Significance: 2e-49; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 441 - 676
Target Start/End: Original strand, 48666 - 48899
Alignment:
Q  441 taaacatctactcttacattgatcatcacatttacatgtgtctcgacatatacaattgtatctaatatggaactttaaatcacaattgacacattaacat 540  Q
    |||| ||||||||||| | || ||||| |||||| ||||  ||| |||| |||  ||| ||||||  |||||||| | |||||||||||||||| |||||    
T  48666 taaatatctactcttatactggtcatctcatttatatgt--ctcaacatctactcttgcatctaaagtggaacttaagatcacaattgacacataaacat 48763  T
Q  541 atctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggt 640  Q
    || ||| | || ||||||||| | ||||| |||||||||||| ||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||    
T  48764 atttttcttaaatgtgagactctctgcgtttgtgatttggtggcataatcaaataaggtaagtcggaggcataacatggttaaatagatggattgatggt 48863  T
Q  641 gattttatggagaagggtttatgattctaactttca 676  Q
    ||||| |||||||  |||||||||||||||||||||    
T  48864 gatttcatggagagaggtttatgattctaactttca 48899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 875 - 983
Target Start/End: Original strand, 49115 - 49224
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    |||||||||||||| ||||||| |||||||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||  |||||||  |||    
T  49115 cacataattttaaaatgtcgctatgtcaactcagcaaaacacatgcactttttcattgttagattccaccaaaaagcaaaagtgaatgtattttaaataa 49214  T
Q  974 tagaggttgg 983  Q
    ||||| ||||    
T  49215 tagagtttgg 49224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 99; Significance: 3e-48; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 28440 - 28606
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||||     
T  28440 aagttgactcctcgatttgttggaccgtttgatgttattgagaaggttggggttgtagcgtataggattgcgttaccaccgtctttgtcgaatcttcata 28539  T
Q  120 atgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatga 186  Q
    ||||||||||||| ||||||||  ||||||| ||  |||||| ||| ||||||||||||||||||||    
T  28540 atgtgtttcatgtgtctcagttgaggaagtaagtacatgatgcgtctcatgtgattcaagtggatga 28606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 36049 - 36143
Alignment:
Q  188 ttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||| ||||| ||||||||||| ||||||||||||||  |||||||||||||||| ||  |||||||||| || ||||| ||||| ||||||||    
T  36049 ttggatgtaagagataatttgacggttgagacttggccggttaggattgaggatcgagagttgaagcgtttacgtggcaaggagattgttttggt 36143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 99; Significance: 3e-48; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 135 - 285
Target Start/End: Original strand, 202903 - 203053
Alignment:
Q  135 ctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggat 234  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||  || |||||||    
T  202903 ctcagttgcggaagtatgtgtatgatgtgtctcttgtgattcaagtggatgatttggaagtaagagataatttgaccgttgagacttgatcagttaggat 203002  T
Q  235 tgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaa 285  Q
    ||||||||| || ||||||||||| || ||||| || ||||||||||||||    
T  203003 tgaggatcgcgaggtgaagcgttttcgtggcaaggaaatcgttttggtgaa 203053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 97; Significance: 4e-47; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 74020 - 73765
Alignment:
Q  32 cgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatg 131  Q
    |||||||||||||||||||||||   | | |||||||| | ||||||  |||||||| ||| |   | ||| |||  ||||||||||||||||||| |||    
T  74020 cgttttgttggaccgtttgagataggttataaggttggagatgtagcatatcggattgcgttattgctgtcgttgcagaatcttcatgatgtgttt-atg 73922  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    | ||||||||  |||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||||| ||||||||||||| | ||||    
T  73921 tgtctcagttgaggaagtatgtgtatgatgtgtctcacgtgattcaagtttatgatttggaagtaagggataatttgacagttgagacttggctagttag 73822  T
Q  232 gattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggtgaaggt 288  Q
    || ||||||||   |||||||||| ||  |||  ||||||| |||||||||||||||    
T  73821 gagtgaggatcagaaagtgaagcgcttaagagaaaaagagaacgttttggtgaaggt 73765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 1e-44; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 32 - 240
Target Start/End: Original strand, 370326 - 370533
Alignment:
Q  32 cgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatg 131  Q
    |||||||||||||| ||||||||| |||| |||||||| ||||||||| || |||||  || ||| ||||| |||||||||||||||||||||||||||     
T  370326 cgttttgttggaccatttgagattgttgataaggttggagttgtagcgtattggattgtgttacc-ccgtcattgtcgaatcttcatgatgtgtttcatt 370424  T
Q  132 tttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattag 231  Q
    | |||||||| | ||||||||| | | |||  |  |  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || ||||    
T  370425 tgtctcagttgcagaagtatgtattttatgcatttcgcgtgattcaagtggatgatttggaagtatgggataatttgaccgtagagacttggacagttag 370524  T
Q  232 gattgagga 240  Q
    |||||||||    
T  370525 gattgagga 370533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 298 - 438
Target Start/End: Complemental strand, 376926 - 376785
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaac---tgtttttgtcaaaac 394  Q
    |||||||||||||||||||||  |||||||||||||  | |||||||||||||||  |||||||||||||||||||||||||   | ||||| || ||||    
T  376926 gagagatagtgccctttttta--ctctaaaactcgtccttctctctaagtaacctaggtgcatttcgtggcctttttcaaaccgttttttttatcgaaac 376829  T
Q  395 ctttgcacaacatgtcctggaatttttggttcggtcccgcttgt 438  Q
    ||||||||||||||| |||  |||| | |||||||| |||||||    
T  376828 ctttgcacaacatgttctgagatttctagttcggtctcgcttgt 376785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 92; Significance: 4e-44; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 8227 - 8096
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  8227 aagttgactcctcgttttgttggaccgtttgatgttattgagaaggttggggttgtagcgtatcggattgcgttaccaccgtctttgtcgaatcttcata 8128  T
Q  120 atgtgtttcatgtttctcagttacggaagtat 151  Q
    ||||||||||||| ||||||||  ||||||||    
T  8127 atgtgtttcatgtgtctcagttgaggaagtat 8096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 5201 - 5319
Alignment:
Q  20 aagttaactcctcgttttgttggaccgtttgagattattgagaaggttggggttgtagcgcatcggatttcgtaaccaccgtctttgtcgaatcttcatg 119  Q
    ||||| ||||||||||||||||| || |||||  |||||||||||||||||||||||| | |||||||| ||| |||||||||||||| |||||||||||    
T  5201 aagttgactcctcgttttgttgggccatttgatgttattgagaaggttggggttgtagtgtatcggattgcgttaccaccgtctttgtagaatcttcatg 5300  T
Q  120 atgtgtttcatgtttctca 138  Q
    |||||||||||||||||||    
T  5301 atgtgtttcatgtttctca 5319  T

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Target: scaffold0615; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 5301 - 5433
Alignment:
Q  150 atgtgtatgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagt 249  Q
    |||||| | |||| || |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  5301 atgtgtttcatgtttctcatgtgattcaagtggatgagttggaagcaagagataatttgaccgttgagacttggccgattaggattgaggatcgtgagtt 5400  T
Q  250 gaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||||| || | ||||||||| ||||||||    
T  5401 gaagcgttttcgtgacaaagagattgttttggt 5433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 78; Significance: 9e-36; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 18198 - 18054
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacctt 397  Q
    |||||| ||||||||||||||| | |||||||  || |||| |||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  18198 gagagacagtgcccttttttaacc-ctaaaacctgtcttgcgctctaagtaacctgagtgcatttcatggcatttttcaaactgttttcctcaaaacctt 18100  T
Q  398 tgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    ||||||||||||| |||||||| | ||||| |||||||||| ||||    
T  18099 tgcacaacatgtcgtggaatttctagttcgatcccgcttgtaataa 18054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 26090 - 25946
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttgtcaaaacctt 397  Q
    |||||| ||||||||||||||| | |||||||  || |||| |||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  26090 gagagacagtgcccttttttaacc-ctaaaacctgtcttgcgctctaagtaacctgagtgcatttcatggcatttttcaaactgttttcctcaaaacctt 25992  T
Q  398 tgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    ||||||||||||| |||||||| | ||||| |||||||||| ||||    
T  25991 tgcacaacatgtcgtggaatttctagttcgatcccgcttgtaataa 25946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 1002 - 1141
Alignment:
Q  81 atcggatttcgtaaccaccgtctttgtcgaatcttcatgatgtgtttcatgtttctcagttacggaagtatgtgtatgatgtgtcacatgtgattcaagt 180  Q
    |||| ||| ||| ||||||| | |||||||| || ||| ||||||||||||| ||||| || |  ||||||||||||||| |||| |||||| |||||||    
T  1002 atcgaattgcgttaccaccgacgttgtcgaacctgcataatgtgtttcatgtgtctcaattgcataagtatgtgtatgatttgtcccatgtggttcaagt 1101  T
Q  181 ggatgatttggaagtaagggataatttgaccgttgagact 220  Q
    | |||||||||||||||| |||||||||| ||||||||||    
T  1102 gaatgatttggaagtaagtgataatttgatcgttgagact 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 21355 - 21238
Alignment:
Q  156 atgatgtgtcacatgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcg 255  Q
    |||||| ||| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||| ||||||  |||||||||| ||||||||  |||||||    
T  21355 atgatgagtctcatgtgatccaagtagatgaattggaagtaagagataatttgaccgttgagatttggccggttaggattgaagatcgtgagttgaagcg 21256  T
Q  256 tttgcgaggcaaagagat 273  Q
    |||||| ||||| |||||    
T  21255 tttgcgtggcaaggagat 21238  T

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Target: scaffold0483 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 1 - 95
Alignment:
Q  188 ttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggcaaagagatcgttttggt 282  Q
    ||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||  |||||||| |||| ||||||||||| ||||||||    
T  1 ttggaagtaagagataatttgaccgttgagacttggctggttaggattgaggatcgtgagttgaagcgtatgcgtggcaaagagattgttttggt 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 167 - 293
Target Start/End: Original strand, 33900 - 34026
Alignment:
Q  167 catgtgattcaagtggatgatttggaagtaagggataatttgaccgttgagacttggccaattaggattgaggatcgtgaagtgaagcgtttgcgaggca 266  Q
    |||||||||||| ||||||||||| ||||||  |||||||||||||||| |||||| ||| ||||||||||| ||||  | ||||||||||| || ||||    
T  33900 catgtgattcaactggatgatttgaaagtaaaagataatttgaccgttgtgacttgaccagttaggattgagcatcgcaaggtgaagcgtttccgtggca 33999  T
Q  267 aagagatcgttttggtgaaggtaattt 293  Q
    | || || |||||||||||||| ||||    
T  34000 aggaaattgttttggtgaaggtgattt 34026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 184368 - 184225
Alignment:
Q  298 gagagatagtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacct 396  Q
    |||||| ||||||||||||   | |||||||| ||| |||||||||||||||||||||| ||| | |||||||||||||||| ||||| | |||||||||    
T  184368 gagagacagtgcccttttt---attctaaaacccgtcttgctctctaagtaacctgagtacatcttgtggcctttttcaaaccgttttcgatcaaaacct 184272  T
Q  397 ttgcacaacatgtcctggaatttttggttcggtcccgcttgtcataa 443  Q
    |||||||||||||| ||  |||| | ||| |||| ||||||| ||||    
T  184271 ttgcacaacatgtcatgagatttctagtttggtctcgcttgtaataa 184225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 20703 - 20778
Alignment:
Q  338 ctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcct 412  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||| |||||||||||||    
T  20703 ctctctaagtaacctgagtgcatttcgtgtcctttttcaaaccgttttcgatcaaaaccttttcacaacatgtcct 20778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 222556 - 222437
Alignment:
Q  325 aaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcacaacatgtcctggaatttttgg 423  Q
    |||||||||  | ||||||||||||||||||||||| ||||||||||||| |||| ||||| | ||||||| ||||||||||||||| ||  |||| | |    
T  222556 aaaactcgtccttctctctaagtaacctgagtgcatctcgtggcctttttaaaaccgttttcgatcaaaacatttgcacaacatgtcttgagatttctag 222457  T
Q  424 ttcggtcccgcttgtcataa 443  Q
    ||||||| ||||||| ||||    
T  222456 ttcggtctcgcttgtaataa 222437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 50279 - 50168
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggcctttttcaaac----tgtttttgtcaaaacctttgcacaacatgtcctggaatttttggttcggtcc 431  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    | ||||| ||||||||||||||||||||||| ||  |||| | | ||||||     
T  50279 tgctttctaagtaacctgagtgcatttcgtggccttttttaaaccatttttttttatcaaaacctttgcacaacatgtcatgagatttctagctcggtct 50180  T
Q  432 cgcttgtcataa 443  Q
    ||||||| ||||    
T  50179 cgcttgtaataa 50168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 305 - 413
Target Start/End: Complemental strand, 29198 - 29093
Alignment:
Q  305 agtgcccttttttaaactctaaaactcgtattgctctctaagtaacctgagtgcatttcgtggcctttttcaaactgtttttg-tcaaaacctttgcaca 403  Q
    ||||||||||||   |||||||||  ||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| | |||||||||||| |||    
T  29198 agtgcccttttt---actctaaaatccgtcttgctctctaagtaacctgagtgcattttgtggcc-ttttcaaaccgttttcgatcaaaacctttgaaca 29103  T
Q  404 acatgtcctg 413  Q
     |||||||||    
T  29102 tcatgtcctg 29093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 553 - 672
Target Start/End: Complemental strand, 15990 - 15871
Alignment:
Q  553 tgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggcataacatggttaaataggtggattgatggtgattttatggag 652  Q
    ||||||||||| |||||||||||  || ||||||||  ||||||||| | |  |||||||||||| ||||||  |||||||||| |||||||| |||||     
T  15990 tgtgagactttatgcgtctgtgaactgatgacataacaaaataaggtcagatggaggcataacattgttaaaagggtggattgacggtgatttaatggaa 15891  T
Q  653 aagggtttatgattctaact 672  Q
    |  | |||||||||||||||    
T  15890 agagatttatgattctaact 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 921 - 982
Target Start/End: Complemental strand, 15632 - 15571
Alignment:
Q  921 ttttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaatagaggttg 982  Q
    ||||||||||||||||| |||||||||||||||||| ||| | |||||  ||||||||||||    
T  15632 ttttttcattgttagattccaccaaaaagcaaaagtcaaggtgttttaaataatagaggttg 15571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 645
Target Start/End: Complemental strand, 17363 - 17229
Alignment:
Q  511 aactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaacagaggc 610  Q
    ||||||||||||||  |||||||||||||| ||  | | |||||||||| | | |||  |||| |||||||||||||  ||||||||| |||||  || |    
T  17363 aactttaaatcacatatgacacattaacatctcactcttaagtgtgagattctctgcacctgtaatttggtgacatagccaaataaggcaaaactaagtc 17264  T
Q  611 ataacatggttaaataggtggattgatggtgattt 645  Q
    | |||||||| ||| || ||| |||||||||||||    
T  17263 acaacatggtaaaaaagttgggttgatggtgattt 17229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 875 - 983
Target Start/End: Original strand, 32137 - 32245
Alignment:
Q  875 cacataattttaaagtgtcgctttgtcaactcagcaaaa-acctgcattttttcattgttagatcccaccaaaaagcaaaagtgaagatattttacgtaa 973  Q
    ||||||| |||||| ||||| || ||||||||   |||| || |||||||||||||||||| ||| ||||||||||| ||||||||  |||||||  |||    
T  32137 cacataaatttaaaatgtcgtttcgtcaactccttaaaacacatgcattttttcattgttatatctcaccaaaaagcgaaagtgaatgtatttta-ataa 32235  T
Q  974 tagaggttgg 983  Q
    ||||||||||    
T  32236 tagaggttgg 32245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 31686 - 31648
Alignment:
Q  336 tgctctctaagtaacctgagtgcatttcgtggccttttt 374  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  31686 tgctctctaagaaacctgagtgcatttcgtggccttttt 31648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1312 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1312
Description:

Target: scaffold1312; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 504 - 624
Target Start/End: Complemental strand, 769 - 651
Alignment:
Q  504 aatatggaactttaaatcacaattgacacattaacatatctttttgaagtgtgagactttttgcgtctgtgatttggtgacataatcaaataaggtaaaa 603  Q
    |||||| |||||||  | ||||||| ||||| ||||||| | ||| |||||||||||||| || |||||| ||||| ||  ||| ||||| ||||| ||     
T  769 aatatgaaactttatgtaacaattggcacatgaacatatatctttaaagtgtgagactttatgagtctgtaatttgttg--atattcaaacaaggttaag 672  T
Q  604 cagaggcataacatggttaaa 624  Q
    |||| ||| ||||||||||||    
T  671 cagacgcacaacatggttaaa 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 17132 - 17058
Alignment:
Q  338 ctctctaagtaacctgagtgcatttcgtggc-ctttttcaaactgttttt---gtcaaaacctttgcacaacatg 408  Q
    ||||||||||||||||||||||| ||||||| |||||||||||  |||||    ||||||| |||||||||||||    
T  17132 ctctctaagtaacctgagtgcatctcgtggctctttttcaaaccattttttcaatcaaaacatttgcacaacatg 17058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1804 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold1804
Description:

Target: scaffold1804; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 645
Target Start/End: Complemental strand, 895 - 854
Alignment:
Q  604 cagaggcataacatggttaaataggtggattgatggtgattt 645  Q
    |||||||| |||||||| |||||||||| |||||||||||||    
T  895 cagaggcacaacatggtaaaataggtgggttgatggtgattt 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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