View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6914_low_41 (Length: 264)

Name: NF6914_low_41
Description: NF6914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6914_low_41
NF6914_low_41
[»] chr1 (39 HSPs)
chr1 (121-246)||(15435074-15435199)
chr1 (134-240)||(34878486-34878592)
chr1 (141-239)||(35484600-35484698)
chr1 (134-226)||(31983965-31984057)
chr1 (134-227)||(10776675-10776768)
chr1 (121-239)||(7337865-7337983)
chr1 (134-212)||(7836981-7837059)
chr1 (141-227)||(14872423-14872509)
chr1 (121-227)||(45415343-45415449)
chr1 (121-224)||(29738838-29738941)
chr1 (134-224)||(18939109-18939199)
chr1 (146-216)||(41176977-41177047)
chr1 (143-232)||(3228049-3228138)
chr1 (134-244)||(1742048-1742158)
chr1 (142-231)||(44915425-44915515)
chr1 (134-226)||(5983621-5983713)
chr1 (134-230)||(21686654-21686750)
chr1 (151-227)||(26535184-26535260)
chr1 (141-237)||(51916874-51916970)
chr1 (141-227)||(49626694-49626780)
chr1 (141-232)||(32679321-32679412)
chr1 (134-203)||(15836001-15836070)
chr1 (154-227)||(27456324-27456397)
chr1 (141-190)||(32394820-32394869)
chr1 (134-227)||(45789349-45789442)
chr1 (134-218)||(11462663-11462747)
chr1 (143-227)||(35462262-35462346)
chr1 (145-232)||(12634946-12635033)
chr1 (137-187)||(8212128-8212178)
chr1 (141-227)||(44543057-44543143)
chr1 (147-224)||(4413091-4413168)
chr1 (143-227)||(940149-940233)
chr1 (144-227)||(21947843-21947925)
chr1 (134-232)||(6218042-6218140)
chr1 (20-50)||(15434974-15435004)
chr1 (141-189)||(31692685-31692733)
chr1 (134-230)||(34413306-34413402)
chr1 (200-232)||(47132694-47132726)
chr1 (134-190)||(50377149-50377204)
[»] chr3 (47 HSPs)
chr3 (134-232)||(45568659-45568757)
chr3 (121-232)||(10232846-10232957)
chr3 (134-232)||(40487101-40487199)
chr3 (121-232)||(47895927-47896038)
chr3 (143-232)||(9998242-9998331)
chr3 (134-239)||(40556480-40556585)
chr3 (144-232)||(21431401-21431489)
chr3 (121-224)||(12050850-12050953)
chr3 (141-232)||(48650957-48651048)
chr3 (134-227)||(38545616-38545709)
chr3 (143-232)||(47042276-47042365)
chr3 (121-237)||(32701269-32701385)
chr3 (144-232)||(35865158-35865246)
chr3 (145-232)||(10108014-10108101)
chr3 (121-239)||(6954898-6955016)
chr3 (143-232)||(10229250-10229339)
chr3 (171-239)||(43488849-43488917)
chr3 (141-235)||(7449124-7449217)
chr3 (141-235)||(7457266-7457359)
chr3 (121-227)||(33579649-33579755)
chr3 (141-239)||(36461653-36461751)
chr3 (121-222)||(9797732-9797830)
chr3 (121-227)||(21534012-21534116)
chr3 (134-232)||(31272021-31272120)
chr3 (141-242)||(50194505-50194606)
chr3 (144-232)||(52923340-52923428)
chr3 (149-232)||(43016631-43016714)
chr3 (141-227)||(629128-629214)
chr3 (143-227)||(953631-953715)
chr3 (192-239)||(20988028-20988075)
chr3 (141-220)||(26276015-26276094)
chr3 (144-190)||(20465192-20465238)
chr3 (141-203)||(54148793-54148855)
chr3 (173-226)||(9688488-9688541)
chr3 (141-239)||(29921820-29921920)
chr3 (141-239)||(29970973-29971073)
chr3 (155-215)||(37040575-37040635)
chr3 (197-232)||(1803246-1803281)
chr3 (134-221)||(7546397-7546484)
chr3 (134-232)||(21290034-21290132)
chr3 (197-227)||(53808140-53808170)
chr3 (141-190)||(4821625-4821674)
chr3 (198-239)||(36910934-36910975)
chr3 (141-237)||(23800131-23800230)
chr3 (134-162)||(29239184-29239212)
chr3 (171-227)||(29249024-29249080)
chr3 (144-227)||(46220459-46220543)
[»] chr8 (34 HSPs)
chr8 (121-232)||(31013771-31013882)
chr8 (133-232)||(10377475-10377574)
chr8 (137-227)||(27110680-27110770)
chr8 (134-227)||(25191279-25191372)
chr8 (144-227)||(17693836-17693919)
chr8 (143-236)||(8412571-8412664)
chr8 (141-234)||(45446031-45446124)
chr8 (121-219)||(37971086-37971181)
chr8 (141-227)||(8980980-8981066)
chr8 (141-224)||(23230430-23230512)
chr8 (124-226)||(15344090-15344192)
chr8 (124-226)||(15433155-15433257)
chr8 (124-226)||(15524459-15524561)
chr8 (144-220)||(3673236-3673312)
chr8 (121-220)||(7677480-7677579)
chr8 (121-227)||(20559944-20560050)
chr8 (121-227)||(20571506-20571612)
chr8 (137-227)||(28897494-28897584)
chr8 (144-225)||(7883463-7883544)
chr8 (134-227)||(20553458-20553551)
chr8 (143-220)||(33214853-33214930)
chr8 (141-232)||(14545123-14545215)
chr8 (141-233)||(29617677-29617769)
chr8 (143-227)||(40211528-40211612)
chr8 (141-227)||(1236913-1236999)
chr8 (134-236)||(8867603-8867705)
chr8 (144-228)||(24099484-24099567)
chr8 (144-220)||(29937905-29937981)
chr8 (143-190)||(8443743-8443789)
chr8 (134-185)||(8826033-8826084)
chr8 (143-222)||(41684221-41684300)
chr8 (151-221)||(27498565-27498635)
chr8 (172-226)||(36948688-36948742)
chr8 (178-230)||(41060482-41060534)
[»] chr6 (21 HSPs)
chr6 (121-239)||(12170265-12170383)
chr6 (121-232)||(33053370-33053481)
chr6 (134-232)||(3913789-3913886)
chr6 (144-239)||(68225-68320)
chr6 (143-231)||(24227936-24228024)
chr6 (136-227)||(605986-606077)
chr6 (137-232)||(29255660-29255755)
chr6 (121-227)||(29320064-29320173)
chr6 (141-232)||(32328805-32328896)
chr6 (121-239)||(23128388-23128506)
chr6 (143-227)||(9723602-9723687)
chr6 (121-219)||(30894427-30894524)
chr6 (170-239)||(9721761-9721830)
chr6 (137-190)||(32191950-32192003)
chr6 (134-230)||(32059688-32059784)
chr6 (143-226)||(7515426-7515509)
chr6 (170-220)||(9719643-9719693)
chr6 (134-226)||(4010715-4010807)
chr6 (121-221)||(34018348-34018448)
chr6 (134-232)||(1523185-1523283)
chr6 (143-227)||(27097834-27097918)
[»] chr5 (26 HSPs)
chr5 (141-239)||(7035996-7036094)
chr5 (121-239)||(13006997-13007115)
chr5 (121-239)||(38597566-38597684)
chr5 (141-227)||(6012360-6012446)
chr5 (141-222)||(38007143-38007224)
chr5 (141-232)||(25979933-25980024)
chr5 (134-221)||(26878294-26878380)
chr5 (121-227)||(31391959-31392065)
chr5 (143-232)||(26825204-26825293)
chr5 (134-225)||(34945204-34945295)
chr5 (143-232)||(15571261-15571350)
chr5 (134-227)||(7929979-7930068)
chr5 (121-216)||(9113927-9114022)
chr5 (153-232)||(11977171-11977250)
chr5 (141-225)||(6216676-6216761)
chr5 (151-239)||(24230018-24230107)
chr5 (144-218)||(11074124-11074199)
chr5 (134-232)||(14211009-14211106)
chr5 (134-232)||(39567071-39567169)
chr5 (172-239)||(13421711-13421779)
chr5 (134-218)||(35850574-35850657)
chr5 (176-232)||(41630286-41630342)
chr5 (197-239)||(8985215-8985257)
chr5 (153-218)||(4770927-4770992)
chr5 (20-49)||(9113824-9113853)
chr5 (135-232)||(28541122-28541219)
[»] chr4 (38 HSPs)
chr4 (121-227)||(2520578-2520684)
chr4 (134-228)||(26091128-26091222)
chr4 (134-239)||(26633885-26633990)
chr4 (144-240)||(22610972-22611068)
chr4 (121-232)||(4142956-4143067)
chr4 (134-227)||(10496143-10496236)
chr4 (144-232)||(19853736-19853824)
chr4 (141-226)||(22558687-22558772)
chr4 (144-232)||(13633910-13633998)
chr4 (148-236)||(56156782-56156870)
chr4 (141-232)||(53810824-53810915)
chr4 (134-220)||(9178165-9178251)
chr4 (141-227)||(54021662-54021748)
chr4 (141-237)||(22300636-22300732)
chr4 (143-246)||(5119120-5119223)
chr4 (134-232)||(48257664-48257762)
chr4 (143-220)||(9165267-9165344)
chr4 (143-227)||(33920853-33920937)
chr4 (144-239)||(21686465-21686560)
chr4 (134-232)||(35348102-35348200)
chr4 (141-237)||(21662276-21662371)
chr4 (141-237)||(21671040-21671135)
chr4 (171-239)||(51024713-51024781)
chr4 (134-217)||(43510010-43510093)
chr4 (121-238)||(45418319-45418433)
chr4 (141-232)||(51888438-51888529)
chr4 (143-228)||(36204604-36204689)
chr4 (141-236)||(29961151-29961246)
chr4 (144-226)||(53443928-53444010)
chr4 (143-232)||(24099295-24099384)
chr4 (134-226)||(22039013-22039105)
chr4 (136-232)||(27651744-27651840)
chr4 (121-232)||(32766309-32766421)
chr4 (153-239)||(1621719-1621805)
chr4 (197-227)||(9643178-9643208)
chr4 (141-227)||(47320623-47320709)
chr4 (143-232)||(9713697-9713786)
chr4 (134-239)||(18935576-18935681)
[»] chr2 (34 HSPs)
chr2 (121-239)||(4778532-4778650)
chr2 (121-232)||(7646258-7646369)
chr2 (121-239)||(12677498-12677616)
chr2 (121-222)||(7678080-7678181)
chr2 (134-239)||(27097620-27097725)
chr2 (143-227)||(1421462-1421546)
chr2 (121-232)||(7448034-7448145)
chr2 (121-232)||(31788242-31788353)
chr2 (134-239)||(35220110-35220212)
chr2 (134-232)||(4098889-4098987)
chr2 (134-232)||(36943339-36943437)
chr2 (134-239)||(43397334-43397439)
chr2 (121-221)||(18763265-18763365)
chr2 (135-224)||(5428084-5428173)
chr2 (144-228)||(9169482-9169566)
chr2 (121-232)||(11985432-11985543)
chr2 (145-227)||(31128974-31129056)
chr2 (134-214)||(37876813-37876893)
chr2 (142-232)||(29279794-29279883)
chr2 (172-231)||(42698928-42698987)
chr2 (140-226)||(41694407-41694493)
chr2 (134-219)||(24461238-24461323)
chr2 (144-227)||(8809073-8809156)
chr2 (153-227)||(36691657-36691732)
chr2 (141-227)||(4904358-4904444)
chr2 (197-239)||(23933869-23933911)
chr2 (141-227)||(32448843-32448929)
chr2 (144-190)||(36175666-36175712)
chr2 (121-203)||(38444982-38445063)
chr2 (143-227)||(28871987-28872069)
chr2 (144-227)||(37416493-37416576)
chr2 (134-227)||(18107951-18108044)
chr2 (143-232)||(25509291-25509379)
chr2 (172-220)||(4042230-4042278)
[»] scaffold0127 (1 HSPs)
scaffold0127 (121-239)||(15261-15379)
[»] chr7 (27 HSPs)
chr7 (121-227)||(19404956-19405062)
chr7 (134-227)||(42978391-42978484)
chr7 (134-232)||(9450352-9450450)
chr7 (141-226)||(12141530-12141615)
chr7 (121-232)||(8013667-8013778)
chr7 (121-219)||(37837660-37837758)
chr7 (121-234)||(30757021-30757134)
chr7 (141-226)||(48061206-48061291)
chr7 (121-227)||(34899809-34899912)
chr7 (121-221)||(48317014-48317114)
chr7 (141-232)||(4529857-4529948)
chr7 (121-232)||(19296656-19296767)
chr7 (121-232)||(39171794-39171905)
chr7 (144-239)||(47590085-47590180)
chr7 (121-239)||(13797133-13797251)
chr7 (143-239)||(39329017-39329113)
chr7 (141-236)||(25287403-25287498)
chr7 (134-228)||(5078608-5078702)
chr7 (141-232)||(40992960-40993050)
chr7 (144-227)||(3224642-3224725)
chr7 (172-227)||(45350445-45350500)
chr7 (143-213)||(9915941-9916011)
chr7 (143-213)||(9923853-9923923)
chr7 (198-239)||(24350695-24350737)
chr7 (21-50)||(19404857-19404886)
chr7 (145-210)||(24770055-24770120)
chr7 (134-190)||(22087137-22087193)
[»] scaffold0884 (1 HSPs)
scaffold0884 (121-226)||(2174-2279)
[»] scaffold0026 (1 HSPs)
scaffold0026 (134-239)||(72079-72184)
[»] scaffold0445 (1 HSPs)
scaffold0445 (134-232)||(1120-1218)
[»] scaffold0219 (1 HSPs)
scaffold0219 (134-222)||(15053-15141)
[»] scaffold0017 (1 HSPs)
scaffold0017 (141-232)||(32970-33061)
[»] scaffold0088 (1 HSPs)
scaffold0088 (121-239)||(50555-50673)
[»] scaffold0262 (1 HSPs)
scaffold0262 (143-223)||(2041-2121)
[»] scaffold0064 (1 HSPs)
scaffold0064 (144-232)||(19261-19348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (141-227)||(58301-58387)
[»] scaffold0603 (1 HSPs)
scaffold0603 (134-226)||(7500-7591)
[»] scaffold0554 (1 HSPs)
scaffold0554 (145-215)||(10672-10742)
[»] scaffold0087 (1 HSPs)
scaffold0087 (141-239)||(25551-25649)
[»] scaffold0492 (1 HSPs)
scaffold0492 (134-203)||(12721-12790)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 15435074 - 15435199
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15435074 tgtagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaatgaagaagaaagaaggttttgagagaagttggagtttctctcaa 15435173  T
Q  221 taaaaaattaggaccggctcaagatt 246  Q
    ||||||| |||  |||||||||||||    
T  15435174 taaaaaactagagccggctcaagatt 15435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 34878486 - 34878592
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  34878486 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 34878585  T
Q  234 ccggctc 240  Q
    |||||||    
T  34878586 ccggctc 34878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 35484600 - 35484698
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||||||||||||| |||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  35484600 tcaaaaaatgacctacaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggccggct 35484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 31984057 - 31983965
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||| ||||||||||||||||||||||  ||||||||||||  ||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  31984057 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaacaaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaa 31983965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 10776675 - 10776768
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||| |||||||||| | |||| |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  10776675 ttctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctccctaaaaaa 10776768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 7337865 - 7337983
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||||||||||||||||| || |||||  |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||| ||||    
T  7337865 tgtagaggggtgattctagatcaaaaaatgacatagaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctttcac 7337964  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  7337965 tagaaaactagggccggct 7337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 7836981 - 7837059
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtt 212  Q
    ||||||||||||||||||||||||||||| | |||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  7836981 ttctagatcaaaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaaggtttagagagaagttggagtt 7837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 14872509 - 14872423
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||||||||| |||||||||||| || ||||||||||| |||||||| |||  || ||||||||||||||||||||||||||||    
T  14872509 tcaaaaaatgaccgaaaaccacaccttctcgatgaatgaagaagaaagaaagttcagaaagaagttggagtttctctcactaaaaaa 14872423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 45415449 - 45415343
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||| ||| || |||| |||||||| ||||  |||||||||| ||||||||||||    
T  45415449 tgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaacgaagaagaaagaaagtttaaagagaagttgaagtttctctcac 45415350  T
Q  221 taaaaaa 227  Q
    || ||||    
T  45415349 tagaaaa 45415343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 29738838 - 29738941
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| | ||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| |||||| ||||||||||||||| |    
T  29738838 tgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagatgttggagtttctctctc 29738937  T
Q  221 taaa 224  Q
    ||||    
T  29738938 taaa 29738941  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 18939199 - 18939109
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 224  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||   || |||||||| || ||||||||||||||||    
T  18939199 ttctagatcaaaaaatgacctaaaaccacctctcctcgattaatgaaggagaaagaaaacttagagagaaggtgaagtttctctcactaaa 18939109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 41177047 - 41176977
Alignment:
Q  146 aaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 216  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  41177047 aaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 41176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 3228138 - 3228049
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||  ||| | ||||||||||||||| ||| |||| |||| ||||    
T  3228138 aaaaaatgacctaaaaccacccctccttgatgaatgaaggagaaataaaatttagggagaagttggagtttttctaactagaaaactagg 3228049  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 1742158 - 1742048
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| ||||||||||||||||||||||   ||||||||||| ||| ||||||| | |||| || ||||||| ||||||||||||||| |||| || |     
T  1742158 ttctaggtcaaaaaatgacctaaaaccaccattccttgatgaacgaaagagaaaggaagtttagaaagaagtttgagtttctctcactagaaaactaagg 1742059  T
Q  234 ccggctcaaga 244  Q
    |||||| ||||    
T  1742058 ccggctgaaga 1742048  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 44915515 - 44915425
Alignment:
Q  142 caaaaaatgacctaaaacca-cacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 231  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||||||| |||| ||||||||||| | ||| |||||||| ||||||||    
T  44915515 caaaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaagtttagagagaagttgaaatttttctcactagaaaattag 44915425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 5983713 - 5983621
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||| ||||||||||| |||||||||  |||||| |||||| |||||||||| || |||| ||||||||||  |||||||||| |||||||    
T  5983713 ttctaggtcaaaaaatgatctaaaaccatccctcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctctctaaaaa 5983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 21686750 - 21686654
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 230  Q
    ||||||||||||||||||||||||| ||   ||||| |||||| ||| |||||||||  ||| || | |||||| ||||||||||||||||||||||    
T  21686750 ttctagatcaaaaaatgacctaaaatcatctctcctcgatgaacgaaagagaaagaaaatttagaaaaaagttgcagtttctctcactaaaaaatta 21686654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 26535260 - 26535184
Alignment:
Q  151 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||| | ||||||||||| |||||||| |||| |||| |||||||||| ||||||||||||||| ||||    
T  26535260 acctaaaaccactcatccttgatgaacgaaggagagagaaagtttagagagaagttagagtttctctcactagaaaa 26535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 51916874 - 51916970
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 237  Q
    |||||||||  ||||||||||| ||||||  ||||| ||||||||||||| |||| |||| || ||| ||||||||||||||||||| |||| ||||    
T  51916874 tcaaaaaatagcctaaaaccacccctcctctatgaacgaaggagaaagaaagtttagagaaaaattgaagtttctctcactaaaaaactagggccgg 51916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 49626780 - 49626694
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||||||||| |||||| ||||| |||| ||||| |||   || |||||||||||||||||||||||| ||||||    
T  49626780 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaaggaacacttagagagaagttggagtttctctcacaaaaaaa 49626694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 32679321 - 32679412
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||| ||||||||| |||||| || || |||| |||||||||   || |||| |||||||| ||||||||||||||||| ||||    
T  32679321 tcaaaaaatgacataaaaccacccctcctcgacgagtgaaagagaaagaaaacttagagaaaagttggaatttctctcactaaaaaactagg 32679412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 15836070 - 15836001
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 203  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  15836070 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 15836001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 27456397 - 27456324
Alignment:
Q  154 taaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||||  |||||| || ||||||||||||||||| |||| || |||||||| ||||| |||||||||||||    
T  27456397 taaaaccatccctcctcgacgaatgaaggagaaagaaagtttagaaagaagttgaagtttttctcactaaaaaa 27456324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 32394869 - 32394820
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  32394869 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaa 32394820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 45789442 - 45789349
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| |||||||||||||||||||||    |||| ||||||||||| ||||| ||  ||| |||||||  | ||||||||||||||||||||    
T  45789442 ttctaggtcaaaaaatgacctaaaaccatcaatcctcgatgaatgaagtagaaataaaatttagagagaacgtagagtttctctcactaaaaaa 45789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 11462663 - 11462747
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 218  Q
    |||||| ||||||||| |||||||| ||| |||| |  ||||| ||||||||||||| |||| ||||||| ||| ||||||||||    
T  11462663 ttctaggtcaaaaaataacctaaaatcacccctcgtcaatgaacgaaggagaaagaaagtttagagagaaattgaagtttctctc 11462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 35462262 - 35462346
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||| | | ||  || || ||||||||||||| |||| |||| ||||| ||||||||| ||||||||||    
T  35462262 aaaaaatgacctaaaaccacccattctcaataaacgaaggagaaagaaagtttagagataagttagagtttctcccactaaaaaa 35462346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 12635033 - 12634946
Alignment:
Q  145 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||| |||| || || |||| |||||| ||    | |||||||||| |||||||||||||||||||| ||||    
T  12635033 aaaatgacctaaaaccacacatcctcgacgagtgaaagagaaaaaaaacatagagagaagtttgagtttctctcactaaaaaactagg 12634946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 8212128 - 8212178
Alignment:
Q  137 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaa 187  Q
    ||||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  8212128 tagatcaaaaaataatctaaaagcacccctccttgatgaatgaaggagaaa 8212178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 44543143 - 44543057
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| ||| |||||||| ||| | |||| ||||| |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  44543143 tcaaagaataacctaaaagcacccttcctcgatgagtgaaagagaaggaaaacttagagagaagttggagtttctctcactaaaaaa 44543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 4413168 - 4413091
Alignment:
Q  147 aatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 224  Q
    ||||||||||||| || |||||| ||| || |||| |||||||| |||| |||| ||||| ||||||||||| |||||    
T  4413168 aatgacctaaaactactcctcctcgataaacgaagaagaaagaaagtttagagaaaagttagagtttctctctctaaa 4413091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 940233 - 940149
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||| ||||||||| | |||| ||||||  || |||||||||  ||| ||||||| || |||||| |||||||||||||    
T  940233 aaaaaatgacttaaaaccactcatcctcgatgaagaaaagagaaagaaaatttagagagaatttagagtttttctcactaaaaaa 940149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 21947843 - 21947925
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| |||||||||||| | |||| |||||| |||| |||||||| |||| |||| || ||| |||||||||||||| ||||    
T  21947843 aaaaataacctaaaaccacccatcctcgatgaacgaag-agaaagaaagtttagagaaaaattgaagtttctctcactagaaaa 21947925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 6218042 - 6218140
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||||||| |||||| ||   ||||||||||| | || || |||||   ||  ||||||||||||| |||| |||||||||||||||||    
T  6218042 ttctaggtcaaaaaatgaactaaaatcatctctccttgatgagttaatgaaaaagataattaagagagaagttggaatttccctcactaaaaaattagg 6218140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 15434974 - 15435004
Alignment:
Q  20 cagaacgccgcacttagacgacgaaatcact 50  Q
    |||||||||||||||||||||||||||||||    
T  15434974 cagaacgccgcacttagacgacgaaatcact 15435004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 31692685 - 31692733
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaaga 189  Q
    |||||||||||||||||| ||||| |||| ||||| |||| ||||||||    
T  31692685 tcaaaaaatgacctaaaatcacacatcctcgatgagtgaaagagaaaga 31692733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 34413306 - 34413402
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 230  Q
    |||||||| ||||| |||||||||| ||| ||| || ||| | |||| |||||| ||   || ||||||||   |||||||||||||||||||||||    
T  34413306 ttctagataaaaaattgacctaaaatcacccctactcgataagtgaaagagaaaaaaaacttagagagaaggcagagtttctctcactaaaaaatta 34413402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 47132726 - 47132694
Alignment:
Q  200 agaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||||||||||| ||||    
T  47132726 agaagttggagtttctctcactaaaaaactagg 47132694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 50377204 - 50377149
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||| |||||||||||||||||||||  |||| | |||||| |||||||||||||    
T  50377204 ttctaggtcaaaaaatgacctaaaacca-tcctcttcgatgaacgaaggagaaagaa 50377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 45568659 - 45568757
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  45568659 ttctagatcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 45568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 10232957 - 10232846
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  10232957 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 10232858  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  10232857 tagaaaactagg 10232846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 40487199 - 40487101
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  40487199 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaattagg 40487101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 47896038 - 47895927
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||| ||| |||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  47896038 tgtagaggggtgattctaggtcaaaaaatgatctataaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 47895939  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  47895938 tagaaaactagg 47895927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 9998331 - 9998242
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  9998331 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 9998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 40556585 - 40556480
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| |||| || ||||||||||||||||| ||||| |||| ||||     
T  40556585 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagtttctcccactagaaaactaggg 40556486  T
Q  234 ccggct 239  Q
    ||||||    
T  40556485 ccggct 40556480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 21431489 - 21431401
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  21431489 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 21431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 12050850 - 12050953
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||| |||||||||| || ||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||||||||||| |    
T  12050850 tgtagaggggtgattctaaatcaaaaaataacttaaaaccacacatccttgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctc 12050949  T
Q  221 taaa 224  Q
    ||||    
T  12050950 taaa 12050953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 48650957 - 48651048
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| ||||||||||||||||||| |||||| |||| ||||    
T  48650957 tcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttggagtttctttcactagaaaactagg 48651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 38545709 - 38545616
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||||||||||||||  |||||  ||||| ||||||||||||| |||| ||||||||||| |||||||||||||| ||||    
T  38545709 ttctaggtcaaaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaa 38545616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 47042276 - 47042365
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||| |||||| |||||| |||||| ||| || |||| ||||||||||||||||||| |||||| |||||||||    
T  47042276 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggataaataaagtttagagagaagttggagtttctttcactagaaaattagg 47042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 32701385 - 32701269
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| || ||| |||||| ||||||||||||| ||||  ||||||||||||||||||  |||    
T  32701385 tgtagagggatgattctaggtcaaaaaatgacctaaaaccaccccacctcgatgaacgaaggagaaagaaagtttaaagagaagttggagtttcttccac 32701286  T
Q  221 taaaaaattaggaccgg 237  Q
    || |||| |||| ||||    
T  32701285 tagaaaactagggccgg 32701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 35865158 - 35865246
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||    
T  35865158 aaaaatgacctaaaaccacccctcctcgaggaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaactagg 35865246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 10108101 - 10108014
Alignment:
Q  145 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10108101 aaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 6954898 - 6955016
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||| ||| ||||||   |||| ||||||||||||| |||| |||||||||||||||||||  |||    
T  6954898 tgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaacgaaggagaaagaaagtttagagagaagttggagtttcttccac 6954997  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  6954998 tagaaaactagggccggct 6955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 10229339 - 10229250
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  10229339 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 10229250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 43488849 - 43488917
Alignment:
Q  171 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||    
T  43488849 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactaaaaaactagggccggct 43488917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 7449124 - 7449217
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 235  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7449124 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7449217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 7457266 - 7457359
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 235  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7457266 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 33579755 - 33579649
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||| ||||||||| | || | |||||| |||||| |||||| |||| ||||||||||| ||||||||||||    
T  33579755 tgtagaggggtgattctaggtcaaaaaatgacttaaaaccacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctcac 33579656  T
Q  221 taaaaaa 227  Q
    || ||||    
T  33579655 tagaaaa 33579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 36461653 - 36461751
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||||||||||||||||| | |||| |||||| ||||||||||||| |||| |||||||  || |||||||| ||||| |||| |||| ||||||    
T  36461653 tcaaaaaatgacctaaaaccactcatcctcgatgaacgaaggagaaagaaagtttagagagaatatgaagtttctcacactagaaaactagggccggct 36461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 9797732 - 9797830
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  |||    ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  9797732 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctca---atgaacgaaggagaaataaagtttagagagaagttggagtttctctcac 9797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 21534012 - 21534116
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||  ||||||||||||| | |||| ||| || ||||||||||||| |||| ||||||| || |||||||||||||    
T  21534012 tgtagaggggtgattctaggtcaaaaa--gacctaaaaccacccatcctcgattaacgaaggagaaagaaagtttagagagaaattagagtttctctcac 21534109  T
Q  221 taaaaaa 227  Q
    |||||||    
T  21534110 taaaaaa 21534116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 31272021 - 31272120
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| | ||||||| |||||||| |||||| |||| |||||| |||||| ||||||   || |||||||||||||||||||||||||| |||||||||    
T  31272021 ttctaggttaaaaaataacctaaaatcacaccctcctcgatgaacgaaggaaaaagaaaacttagagagaagttggagtttctctcactagaaaattagg 31272120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 50194505 - 50194606
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 240  Q
    ||||||||||| |||||||||| ||| || || || |||| ||||| |||   || ||||||||||||||||||||||||||||||| ||||  ||||||    
T  50194505 tcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaagttggagtttctctcactaaaaaactagggtcggctc 50194604  T
Q  241 aa 242  Q
    ||    
T  50194605 aa 50194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 52923340 - 52923428
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||| |||||| ||  |||||  ||||| ||||||||||||| |||| |||||||||||||||||||  |||||||||| ||||    
T  52923340 aaaaatgacttaaaactacctctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactaaaaaaatagg 52923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 43016714 - 43016631
Alignment:
Q  149 tgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||| | |||| |||||| ||| |||||||||  ||| |||||||||| ||||||||||||||| |||| ||||    
T  43016714 tgacctaaaaccacccttcctcgatgaacgaaagagaaagaaaatttagagagaagttagagtttctctcactagaaaactagg 43016631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 629128 - 629214
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||||||||| |||||| ||||| |||| | ||| |||   || |||||||||| ||||||||||||||||||||    
T  629128 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaacttagagagaagttagagtttctctcactaaaaaa 629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 953631 - 953715
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||   || |||||||  ||||||||||||||||| ||||    
T  953631 aaaaaaagacctaaaaccacttctcctcaatgaatgaaggagaaagaaaacttagagagaatgtggagtttctctcactataaaa 953715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 20988028 - 20988075
Alignment:
Q  192 gttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  20988028 gtttagagagaagttggagtttctctcactaaaaaactagggccggct 20988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 26276015 - 26276094
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| ||||||||||||  |||||  |||||| |||||||||||| ||||  |||||| || |||||||||||||    
T  26276015 tcaaaaaattacctaaaaccacctctcctcaatgaataaaggagaaagaaagtttacagagaaattagagtttctctcac 26276094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 20465192 - 20465238
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  20465192 aaaaatgacataaaaccacccctacttgatgaatgaaggagaaagaa 20465238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 54148855 - 54148793
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 203  Q
    |||||||||||||||||||||| |||||| |||  | ||||||||||||| |||| |||||||    
T  54148855 tcaaaaaatgacctaaaaccacccctcctcgattgacgaaggagaaagaaagtttagagagaa 54148793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 9688488 - 9688541
Alignment:
Q  173 tgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    ||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||||    
T  9688488 tgaatgaagaagaaagaaaatttagagagaagttgaagtttctctcactaaaaa 9688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 29921920 - 29921820
Alignment:
Q  141 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 238  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29921920 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29921821  T
Q  239 t 239  Q
    |    
T  29921820 t 29921820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 29971073 - 29970973
Alignment:
Q  141 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 238  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29971073 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29970974  T
Q  239 t 239  Q
    |    
T  29970973 t 29970973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 37040635 - 37040575
Alignment:
Q  155 aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 215  Q
    |||||||| ||||||||||||| ||| ||||||||| |||| || ||||||| ||||||||    
T  37040635 aaaaccacccctccttgatgaacgaaagagaaagaaagtttagaaagaagtttgagtttct 37040575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 1803246 - 1803281
Alignment:
Q  197 gagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1803246 gagagaagttggagtttctttcactaaaaaattagg 1803281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 7546484 - 7546397
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 221  Q
    |||||||||||||| |||||||||| ||| |||||| ||||| |||  |||||||||   || |||||||| | || |||||||||||    
T  7546484 ttctagatcaaaaattgacctaaaatcacccctcctcgatgagtgagagagaaagaaaacttagagagaagattgaatttctctcact 7546397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 21290034 - 21290132
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||| |||||||||| |||  |||||  |||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  21290034 ttctaggtcaaaaattgacctaaaatcacctctcctccatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 21290132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 53808140 - 53808170
Alignment:
Q  197 gagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  53808140 gagagaagttggagtttctctcactaaaaaa 53808170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 4821674 - 4821625
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||||||||||||||||||| ||| || || ||||||| |||||||||    
T  4821674 tcaaaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaagaa 4821625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 36910934 - 36910975
Alignment:
Q  198 agagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||||||||||||||||||||||| |||| |||| ||||||    
T  36910934 agagaagttggagtttctctcactagaaaactagggccggct 36910975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 23800131 - 23800230
Alignment:
Q  141 tcaaaaaatgacctaaaacca--cacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaattaggaccgg 237  Q
    ||||||||| |||||||||||  | |||| | ||||||||||||||||| ||  ||| ||||| || ||| |||||||||||||| |||| |||| ||||    
T  23800131 tcaaaaaataacctaaaaccacccccctcttcgatgaatgaaggagaaaaaaaatttagagagaaatttgaagtttctctcactagaaaactagggccgg 23800230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 29239212 - 29239184
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccac 162  Q
    |||||||||||||||||||||||||||||    
T  29239212 ttctagatcaaaaaatgacctaaaaccac 29239184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 29249080 - 29249024
Alignment:
Q  171 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| ||||||||||||||   ||  ||||||||| ||||||||||||||||||||    
T  29249080 gatgagtgaaggagaaagaaaaattaaagagaagttagagtttctctcactaaaaaa 29249024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 46220543 - 46220459
Alignment:
Q  144 aaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||||||||||||||| || ||||  || ||| || ||||||||| |||| ||||||||||  ||||||| |||||| ||||    
T  46220543 aaaaatgacctaaaaccaccccttcctcaataaataaaagagaaagaaagtttagagagaagttatagtttctatcactagaaaa 46220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 31013771 - 31013882
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  31013771 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 31013870  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  31013871 tagaaaactagg 31013882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 10377574 - 10377475
Alignment:
Q  133 gttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10377574 gttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 27110680 - 27110770
Alignment:
Q  137 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||||||| | || | |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  27110680 tagatcaaaaaatgacctaaaaccacccatcttcgatgaatgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaa 27110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 25191279 - 25191372
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| |||||||||||||||||| |||  ||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25191279 ttctaggtcaaaaaatgacctaaaatcacctctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 25191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 17693836 - 17693919
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||| || ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17693836 aaaaatgacctaaaacaacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 17693919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 8412571 - 8412664
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 236  Q
    |||||||||||||||||||| ||| || |||||| ||| ||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||||    
T  8412571 aaaaaatgacctaaaaccacccctactcgatgaacgaatgagaaagaaagtttagagagaagttagagtttctctcactagaaaactaggaccg 8412664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 45446031 - 45446124
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggac 234  Q
    |||||||||||| |||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||    
T  45446031 tcaaaaaatgacataaaactacccttcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactaggac 45446124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 37971181 - 37971086
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||   ||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  37971181 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcctc---gatgaatgaagaagaaagaaaatttagagagaagttggagtttctctca 37971086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 8981066 - 8980980
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||| |||||| || || |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  8981066 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaacgaaaacttagagagaagttggagtttctctcactaaaaaa 8980980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 23230512 - 23230430
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 224  Q
    ||||||| ||||||||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||    
T  23230512 tcaaaaattgacctaaaac-acccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaa 23230430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 15344192 - 15344090
Alignment:
Q  124 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 223  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15344192 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15344093  T
Q  224 aaa 226  Q
    |||    
T  15344092 aaa 15344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 15433257 - 15433155
Alignment:
Q  124 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 223  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15433257 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15433158  T
Q  224 aaa 226  Q
    |||    
T  15433157 aaa 15433155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 15524561 - 15524459
Alignment:
Q  124 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 223  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15524561 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15524462  T
Q  224 aaa 226  Q
    |||    
T  15524461 aaa 15524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 3673312 - 3673236
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||||||||||||  |||| | ||||||| |||||||||||| |||| ||||||||||| ||||||| ||||    
T  3673312 aaaaatgacctaaaaccaaccctcttcgatgaataaaggagaaagaaagtttagagagaagttgaagtttctttcac 3673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 7677480 - 7677579
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||| ||||||||  ||| ||||||| || |||||| ||||||    
T  7677480 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaatttagagagaaattagagtttatctcac 7677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 20559944 - 20560050
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20559944 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20560043  T
Q  221 taaaaaa 227  Q
    || ||||    
T  20560044 tagaaaa 20560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 20571506 - 20571612
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20571506 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20571605  T
Q  221 taaaaaa 227  Q
    || ||||    
T  20571606 tagaaaa 20571612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 28897584 - 28897494
Alignment:
Q  137 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||| ||||||||| |||||| || |||||||| |||| ||  ||||  | |||||||| ||||||||||| |||||||    
T  28897584 tagatcaaaaaatgacttaaaaccacccctcctcgacgaatgaagaagaacgagagtttaaaaagaagttgaagtttctctcattaaaaaa 28897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 7883463 - 7883544
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 225  Q
    ||||||||||||||||||| | || | |||||| ||| |||||||||  ||| || |||||||| |||||||||||||||||    
T  7883463 aaaaatgacctaaaaccactcatcatcgatgaacgaatgagaaagaaaatttagaaagaagttgaagtttctctcactaaaa 7883544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 20553458 - 20553551
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| || |||||||| |||||||||| |||||| |||||| |||| ||||| || ||||  ||||||||||| ||||||||| ||| ||||    
T  20553458 ttctaggtccaaaaatgatctaaaaccacccctcctcgatgaacgaagaagaaaaaaagtttaaagagaagttggtgtttctctccctagaaaa 20553551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 33214853 - 33214930
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    |||||| ||||||||||||| | |||| |||||| ||||||||||||| |||| ||||||| ||| ||||| ||||||    
T  33214853 aaaaaaagacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaaattgaagtttgtctcac 33214930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 14545123 - 14545215
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac-taaaaaattagg 232  Q
    |||||||||||||||||||||| | ||||| | ||||||||||||||     ||| ||||||||||||||||||||  || ||||||||||||    
T  14545123 tcaaaaaatgacctaaaaccactcatccttaacgaatgaaggagaaattttttttagagagaagttggagtttctcgaacttaaaaaattagg 14545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 29617677 - 29617769
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    ||||||||||||||||||| ||| ||| | ||| | |||| |||||| ||  ||| ||||||||||| | ||||||||||||||||| |||||    
T  29617677 tcaaaaaatgacctaaaacaacatctcttcgataagtgaaagagaaacaaaatttagagagaagttgaaatttctctcactaaaaaactagga 29617769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 40211528 - 40211612
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||| ||||||| |||| |||||| ||| || |||||||||||||  |||  |||||| |||||||||||||||||| ||||    
T  40211528 aaaaaattacctaaagccacccctcctcgattaacgaaggagaaagaaattttaaagagaaattggagtttctctcactagaaaa 40211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 1236913 - 1236999
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||||||||| ||||||  ||||  ||| ||||| |||   || ||||||||||| |||||||||||||||||||    
T  1236913 tcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaacttagagagaagttgaagtttctctcactaaaaaa 1236999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 8867705 - 8867603
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    ||||||||||||||||||| ||||| ||| | | || |||| ||||| |||||||||   || |||||||  || ||||||||| ||||||||| |||||    
T  8867705 ttctagatcaaaaaatgacttaaaatcactcatactcgatggatgaaagagaaagaaaacttagagagaatgtgtagtttctctaactaaaaaactagga 8867606  T
Q  234 ccg 236  Q
    |||    
T  8867605 ccg 8867603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 24099484 - 24099567
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 228  Q
    |||||||||||||| |||| ||| || ||||| |||| |||||||||    | ||||||||||| ||||||||||||||||||||    
T  24099484 aaaaatgacctaaagccac-cctactcgatgattgaaagagaaagaaaacctagagagaagttgaagtttctctcactaaaaaat 24099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 29937981 - 29937905
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    |||||||| |||||||||| | ||||  ||||| |||| |||||||| ||||  |||||| ||||||||||||||||    
T  29937981 aaaaatgatctaaaaccacccatcctcaatgaacgaagtagaaagaaagtttaaagagaaattggagtttctctcac 29937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 8443743 - 8443789
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  8443743 aaaaaatgacctaaaaccacccct-cttgatgaatgaaagagaaagaa 8443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 8826084 - 8826033
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggaga 185  Q
    ||||||||||||||||||||||||||||| | |||| ||||| |||| ||||    
T  8826084 ttctagatcaaaaaatgacctaaaaccacccatcctcgatgagtgaaagaga 8826033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 41684300 - 41684221
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 222  Q
    ||||| ||||||||||||||    |||| ||||||||||||||||||| |  |  || ||||||||||||||||||||||    
T  41684300 aaaaactgacctaaaaccacttaccctttatgaatgaaggagaaagaaagcctaaagggaagttggagtttctctcacta 41684221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 27498565 - 27498635
Alignment:
Q  151 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 221  Q
    |||||||||| | |||| | |||||||||||||||||||| | ||  ||| |||||| |||||||||||||    
T  27498565 acctaaaaccgcccctcatcgatgaatgaaggagaaagaaagcttaaagataagttgaagtttctctcact 27498635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 36948688 - 36948742
Alignment:
Q  172 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||| |||||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  36948688 atgaataaaggagaaagaaagtttaaagagaagttgaagtttgtctcactaaaaa 36948742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 41060482 - 41060534
Alignment:
Q  178 gaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 230  Q
    |||||||||||||  ||| |||||| | || ||||||||||||||||||||||    
T  41060482 gaaggagaaagaaattttagagagatgatgaagtttctctcactaaaaaatta 41060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 12170383 - 12170265
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtctagagagaagttggagtttctctcac 12170284  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  12170283 tagaaaactagggccggct 12170265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 33053370 - 33053481
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  33053370 tgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 33053469  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  33053470 tagaaaactagg 33053481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 3913789 - 3913886
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  3913789 ttctaggtcaaaaaatgacctaaaaccac-cctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 3913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 68225 - 68320
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||| |||||||||||  |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||  ||||||||| |||| ||||||    
T  68225 aaaaattacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcctactaaaaaactagggccggct 68320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 24227936 - 24228024
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 231  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| || | || |||| ||||||||||||| | || |||||||||||    
T  24227936 aaaaaatgacctaaaaccactcctccttgatgaatgaagaagaaataaagcttggagaaaagttggagtttcgcccattaaaaaattag 24228024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 606077 - 605986
Alignment:
Q  136 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||| |||||||||||| ||||| ||| |||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||| ||||    
T  606077 ctaggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagaaaagttggagtttctcccactagaaaa 605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 29255660 - 29255755
Alignment:
Q  137 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||| |||||| |||||||||| ||| | |||||| ||||||||||||  |||| ||||||||||||| |||||||||||| ||| |||||    
T  29255660 tagatcaaagaatgacataaaaccacatctcttcgatgaacgaaggagaaagagagtttggagagaagttggaatttctctcactagaaagttagg 29255755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 29320064 - 29320173
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagtt---ggagtttctct 217  Q
    ||||||||| |  ||||||||||||| ||||||||||||||| | |||| |||||| ||||||||||||| ||||  |||||||||   |||||||||||    
T  29320064 tgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttaaagagaagttggaggagtttctct 29320163  T
Q  218 cactaaaaaa 227  Q
    || |||||||    
T  29320164 cattaaaaaa 29320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 32328805 - 32328896
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||| |||| ||||||||| |||||| |||||| ||||||||||||| || | |||||||||| ||||||||||||||| |||| ||||    
T  32328805 tcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaagtatagagagaagttagagtttctctcactagaaaactagg 32328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 23128506 - 23128388
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||||||||||| |  ||||||  ||||| ||||||||||||| |||| |||||||||| ||||||||| |||    
T  23128506 tgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaagaaagtttagagagaagttagagtttctcccac 23128407  T
Q  221 taaaaaattaggaccggct 239  Q
    || || | ||| |||||||    
T  23128406 tagaatactagaaccggct 23128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 9723602 - 9723687
Alignment:
Q  143 aaaaaatgacctaaaaccacacctcct-tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||||| |||||| ||||||| ||| ||||||||| |||| ||||||||||||||||||| |||||| ||||    
T  9723602 aaaaaaagacctaaaaccacccctcctctgatgaacgaacgagaaagaaagtttagagagaagttggagtttctttcactagaaaa 9723687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 30894524 - 30894427
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 219  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||| || |||||||||| || |||| ||||||||||| |||||||||||    
T  30894524 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgattaacgaaggagaaa-aaagtttagagagaagttgaagtttctctca 30894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 9721761 - 9721830
Alignment:
Q  170 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| | ||||||    
T  9721761 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcactagaaaattatggccggct 9721830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 32191950 - 32192003
Alignment:
Q  137 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  32191950 tagatcaaaaaaggacctaaaaccacccctccttgatgaatgaaagagaaagaa 32192003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 32059784 - 32059688
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 230  Q
    |||||| ||||| |||||| |||||||||   |||| |||||||||| ||||||||| ||||  |||||| ||||| |||||||||||| |||||||    
T  32059784 ttctaggtcaaacaatgacttaaaaccacctatcctcgatgaatgaaagagaaagaatgtttaaagagaacttggaatttctctcactagaaaatta 32059688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 7515426 - 7515509
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    ||||||| | |||||||||| |||||| |||||| ||| ||||||| | |||| |||||||||||||| ||||||| |||||||    
T  7515426 aaaaaataatctaaaaccacccctcctcgatgaacgaaagagaaagcaagtttagagagaagttggagcttctctctctaaaaa 7515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 9719643 - 9719693
Alignment:
Q  170 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  9719643 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcac 9719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 4010715 - 4010807
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||| ||||||||||| |||||  ||| ||||||  || ||| ||||||||||||   || |||||||| || ||||||||||||||||||    
T  4010715 ttctaggtcaaaaaatgatctaaagtcactcctcctcaataaataaaggagaaagaaaacttagagagaagatgaagtttctctcactaaaaa 4010807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 34018448 - 34018348
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||||||||||||   | |||| |||||| ||||||||||||| |||| || | || ||| || |||||||||    
T  34018448 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccttccatcctcgatgaacgaaggagaaagaaagtttagacaaaaattgaagcttctctcac 34018349  T
Q  221 t 221  Q
    |    
T  34018348 t 34018348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 1523283 - 1523185
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||| |||||||||| ||| ||||||| |||  |||| |||||| ||   || |||||||  | ||||||||||||||| |||||||||    
T  1523283 ttctaggtcaaaaattgacctaaaatcacccctccttcatgtgtgaaagagaaataaaacttagagagaatgtagagtttctctcactataaaattagg 1523185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 27097834 - 27097918
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||||| | ||||  |||| |||| |||||||||   || |||||||  || |||||||||||||||||||    
T  27097834 aaaaaaagacctaaaaccactcttcctgaatgagtgaaagagaaagaaaacttagagagaatgtgaagtttctctcactaaaaaa 27097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 7036094 - 7035996
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| |||| ||||||    
T  7036094 tcaaaaaatgacctaaaaccaccccaccttgatgaatgaaggagaaagaaagtttagagagaagtttgagtttctctcactagaaaactagggccggct 7035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 13007115 - 13006997
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  ||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  13007115 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 13007016  T
Q  221 taaaaaattaggaccggct 239  Q
    ||||||| |||| ||||||    
T  13007015 taaaaaactagggccggct 13006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 38597684 - 38597566
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38597684 tgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 38597585  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  38597584 tagaaaactagggccggct 38597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 6012360 - 6012446
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  6012360 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaa 6012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 38007224 - 38007143
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 222  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||| | |||||||||||||||    
T  38007224 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagattgagtttctctcacta 38007143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 25980024 - 25979933
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||| ||||||| | |||| |||||| ||||||||||||| |||| |||||||||||||||||| ||||||| |||| ||||    
T  25980024 tcaaaaaatgacctgaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcgctcactagaaaactagg 25979933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 26878294 - 26878380
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 221  Q
    |||||||||||||| |||| |||||||||  ||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  26878294 ttctagatcaaaaa-tgacataaaaccacctctcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 26878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 31391959 - 31392065
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| |||||||||| || ||| ||||||    
T  31391959 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttagaatttttctcac 31392058  T
Q  221 taaaaaa 227  Q
    || ||||    
T  31392059 tagaaaa 31392065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 26825293 - 26825204
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  26825293 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 26825204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 34945295 - 34945204
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 225  Q
    |||||| |||||||||||||||||||||  | || | |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  34945295 ttctaggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaagaaagtttagagagaatttggagtttctcccactaaaa 34945204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 15571350 - 15571261
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||| ||||||||   ||||| |||||||||||||||||||| | || |||||||||| ||||||||||||||| |||| ||||    
T  15571350 aaaaaatgacataaaaccatttctcctcgatgaatgaaggagaaagaaagcttggagagaagttagagtttctctcactagaaaactagg 15571261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 7930068 - 7929979
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||    |||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  7930068 ttctaggtcaaaaattgacctaaaatcacccctccttgatgaa----ggagaaagaaagtttagagagaatttggagtttctctcactagaaaa 7929979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 9113927 - 9114022
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 216  Q
    ||||||||| |  |||||| | |||||||||||||||| ||| |||||| |||||| ||| ||||||||| |||| |||||||||| |||||||||    
T  9113927 tgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaagaaagtttagagagaagttagagtttctc 9114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 11977171 - 11977250
Alignment:
Q  153 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||| ||| || |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  11977171 ctaaaaccaccccttctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 11977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 6216761 - 6216676
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaag-ttggagtttctctcactaaaa 225  Q
    ||||| |||||||||||||||| | |||| |||||| ||| |||||| || |||| |||||||| || ||||||||||||||||||    
T  6216761 tcaaagaatgacctaaaaccacccatcctcgatgaacgaatgagaaataaagtttagagagaagttttgagtttctctcactaaaa 6216676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 24230018 - 24230107
Alignment:
Q  151 acctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||||| |  ||||| |||||| |||| | |||||| ||||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  24230018 acctaaaacctccactcctcgatgaacgaagaacaaagaaagttttagagagaagttggagtttctctcactagaaaactagggccggct 24230107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 11074124 - 11074199
Alignment:
Q  144 aaaaatgacctaaaaccacac-ctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 218  Q
    |||||| |||||||||||| | ||||| |||||| || |||||||||| |||| |||| |||||||||||||||||    
T  11074124 aaaaataacctaaaaccaccctctcctcgatgaacgagggagaaagaaagtttagagaaaagttggagtttctctc 11074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 14211106 - 14211009
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  14211106 ttctaggtcaaaaattgacctaaaatcac-cctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 14211009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 39567169 - 39567071
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   ||  |||||||  || |||||||||||||||||||||||    
T  39567169 ttctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaagaaaacttaaagagaagacggtgtttctctcactaaaaaattagg 39567071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 13421779 - 13421711
Alignment:
Q  172 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta-aaaaattaggaccggct 239  Q
    |||||||||| |||||||| ||||  |||||||||| |||||||||||||| ||||| ||||| |||||    
T  13421779 atgaatgaagaagaaagaaagtttaaagagaagttgaagtttctctcactagaaaaactaggatcggct 13421711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 35850657 - 35850574
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 218  Q
    |||||| |||||||| ||||||||||||| |||||| ||| || ||| |||||| || |||| ||||||| ||||| ||||||||    
T  35850657 ttctaggtcaaaaaa-gacctaaaaccacccctcctcgataaacgaatgagaaataaagtttagagagaaattggactttctctc 35850574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 41630342 - 41630286
Alignment:
Q  176 atgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||| ||||||||| | || ||||||||||| ||||||||||||| ||||||||||    
T  41630342 atgaatgagaaagaaagcttagagagaagttgaagtttctctcactgaaaaattagg 41630286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 8985215 - 8985257
Alignment:
Q  197 gagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||||||||||||||||||||||||||||  |||| ||||||    
T  8985215 gagagaagttggagtttctctcactaaaaagctagggccggct 8985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 4770992 - 4770927
Alignment:
Q  153 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 218  Q
    |||||| ||| |||||| ||| || |||| |||||||| |||| |||||||||| |||||||||||    
T  4770992 ctaaaatcacccctcctcgattaacgaagaagaaagaaagtttagagagaagttagagtttctctc 4770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 9113824 - 9113853
Alignment:
Q  20 cagaacgccgcacttagacgacgaaatcac 49  Q
    ||||||||||||||||||||||||||||||    
T  9113824 cagaacgccgcacttagacgacgaaatcac 9113853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 28541122 - 28541219
Alignment:
Q  135 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||| ||||||| |||||||||| ||| || ||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||| ||||    
T  28541122 tctaggtcaaaaattgacctaaaatcaccccacctcgatgagtgaaagaggaagaaaacttagagagaagaaagagtttctctcactaaaaaaatagg 28541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 2520684 - 2520578
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  2520684 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 2520585  T
Q  221 taaaaaa 227  Q
    || ||||    
T  2520584 tagaaaa 2520578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 26091128 - 26091222
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 228  Q
    |||||| ||||||||| |||||||| ||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26091128 ttctaggtcaaaaaataacctaaaatcactcatcctcgatgaatgaaggagaaagaaggtttagagagaagttggagtttctctcactaaaaaat 26091222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 26633885 - 26633990
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||| ||||| ||||||  ||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26633885 ttctaggtcaaaaaatgacctaagaccacccctcctcaatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaaactagga 26633984  T
Q  234 ccggct 239  Q
    ||||||    
T  26633985 ccggct 26633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 22611068 - 22610972
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 240  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  22611068 aaaaatgacctaaaaccacccctcctcgacgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagggccggctc 22610972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 4142956 - 4143067
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| ||||  ||||||||||||||||||| |||    
T  4142956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttatagagaagttggagtttctcccac 4143055  T
Q  221 taaaaaattagg 232  Q
    ||||||| ||||    
T  4143056 taaaaaactagg 4143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 10496236 - 10496143
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||||    
T  10496236 ttctaggtcaaaaattgacctaaaaccacacctcctcgatgaacgaaggagtaagaaagtttagaaagaagttggagtttctctcactagaaaa 10496143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 19853736 - 19853824
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  19853736 aaaaatgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 19853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 22558687 - 22558772
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  22558687 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaaattggagtttctctctctaaaaa 22558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 13633998 - 13633910
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||  ||||| |||||  ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  13633998 aaaaatgacctaaaaccaccactcctcgatgagcgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 13633910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 56156782 - 56156870
Alignment:
Q  148 atgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 236  Q
    ||||||||||||||| | ||||||||||| |||  |||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  56156782 atgacctaaaaccacccatccttgatgaacgaataagaaagaaagtttagagagaagttggagtttctctcaataaaaaactaggaccg 56156870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 53810915 - 53810824
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||||| |||||| |||||| ||||||| ||||| |||| |||||||| ||||||||||| ||||| |||| ||||    
T  53810915 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaggaagaaagtttagagagaagctggagtttctcccactagaaaactagg 53810824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 9178251 - 9178165
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||  ||| |||||||  || ||||||||||||    
T  9178251 ttctaggtcaaaaaatgacctaagaccacccctccttgatgaatgaaggagaaagaaattttagagagaaactgaagtttctctcac 9178165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 54021748 - 54021662
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||| |  ||| ||||||||||| |||||||| |||| ||||||| ||| |||||||||||||||||||    
T  54021748 tcaaaaaatgacctaaaaccactctccctcgatgaatgaagaagaaagaaagtttagagagaaattgaagtttctctcactaaaaaa 54021662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 22300732 - 22300636
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 237  Q
    |||||||||||||||||||||| |||||| || || |||| |||||| ||  ||| |||||||||||||||||||||| |||||||| |||| ||||    
T  22300732 tcaaaaaatgacctaaaaccactcctcctcgacgagtgaaagagaaataaaatttagagagaagttggagtttctctctctaaaaaactagggccgg 22300636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 5119223 - 5119120
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctcaa 242  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| || |||| || |||||||| | ||| |||||||| |||| |||| ||| | |||    
T  5119223 aaaaaatgacataaaaccacccctccttgatgaatgaaggagaaataaagtttagaaagaagttgaaatttatctcactagaaaactagggccgacacaa 5119124  T
Q  243 gatt 246  Q
    ||||    
T  5119123 gatt 5119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 48257664 - 48257762
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||| ||||||||| |||||| |||| | ||| ||||||||| ||||  |||||||||||||||| |||||||| |||| ||||    
T  48257664 ttctaggtcaaaaaatgacataaaaccacccctcctcgatgtacgaatgagaaagaaagtttaaagagaagttggagtttttctcactagaaaactagg 48257762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 9165267 - 9165344
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    |||| |||||||||||||||  ||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||||||    
T  9165267 aaaatatgacctaaaaccacctctcctcgatgaatgatggaaaaagaaagtttagagagaagttggagtttctctcac 9165344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 33920937 - 33920853
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||| | | || ||||||||||| |||||||| |||| | || |||||| |||||||||||||||||||    
T  33920937 aaaaaatgacctaaaaccacccattctcgatgaatgaagaagaaagaaagtttagggaaaagttgaagtttctctcactaaaaaa 33920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 21686465 - 21686560
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||| ||||| ||||||| |||||| ||||||  |||||||||||| |||| ||||||||||  |||||||||||||| |||| ||||| |||||    
T  21686465 aaaaaagacctcaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttaaagtttctctcactagaaaactaggatcggct 21686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 35348200 - 35348102
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||||||| ||| |||||  |||||  |||||||||| || ||||  |||||||||||||||||| |||||| |||| ||||    
T  35348200 ttctaggtcaaaaaatgacctaaaatcacccctccacgatgagcgaaggagaaaaaaagtttaaagagaagttggagtttctttcactagaaaactagg 35348102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 21662371 - 21662276
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 237  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21662371 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 21671135 - 21671040
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 237  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21671135 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21671040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 51024713 - 51024781
Alignment:
Q  171 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||  ||||||||| ||||||    
T  51024713 gatgaacgaaggagaaagaaagtatagagagaagttggagtttctctcactggaaaattagggccggct 51024781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 43510093 - 43510010
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctct 217  Q
    |||||| |||||||||||||||||||||| | || | |||||| ||||||||| ||| ||||  |||||||||| |||||||||    
T  43510093 ttctaggtcaaaaaatgacctaaaaccacccttcttcgatgaacgaaggagaatgaaagtttaaagagaagttgaagtttctct 43510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 45418433 - 45418319
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||   ||||| |||||||| |||||||| ||  ||| ||||||||||| ||||| |||| |    
T  45418433 tgtagagggatgattctaggtcaaaaaatgacctaaaacca---ctcctcgatgaatggaggagaaaaaatttttagagagaagttgaagtttttctcgc 45418337  T
Q  221 taaaaaattaggaccggc 238  Q
    || |||| |||| |||||    
T  45418336 tagaaaactagggccggc 45418319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 51888438 - 51888529
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||||| |||||| ||||| |||| |||||||||    | |||| |||||| ||||||||||| ||||||| ||||    
T  51888438 tcaaaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaagaaaacgtagagaaaagttgaagtttctctcaataaaaaactagg 51888529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 36204604 - 36204689
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 228  Q
    |||||||||||||||||||  | |||||||||| |||| |||||||||    | |||||||| ||||||| |||||||||||||||    
T  36204604 aaaaaatgacctaaaaccatccatccttgatgattgaaagagaaagaaaacctagagagaaggtggagttcctctcactaaaaaat 36204689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 29961151 - 29961246
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 236  Q
    ||||||||| |||||||| ||  |||| | ||||||  ||||| |||||| |||| ||||||||||||||||||||||| || ||| |||| ||||    
T  29961151 tcaaaaaataacctaaaatcatccctcttcgatgaacaaaggaaaaagaaagtttagagagaagttggagtttctctcattagaaagttagaaccg 29961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 53444010 - 53443928
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    ||||||||||||||||||   |||||  ||||| ||| |||||| || |||| ||||||||||| ||||| ||||||||||||    
T  53444010 aaaaatgacctaaaaccaacgctcctcaatgaacgaaagagaaaaaaagtttagagagaagttgaagtttatctcactaaaaa 53443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 24099295 - 24099384
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||||  ||||| |||||| | || |||||||| |||| ||||||| ||  ||||||| |||||| |||| ||||    
T  24099295 aaaaaatgacctaaaaccacctctcctcgatgaacgtagaagaaagaaagtttagagagaatttaaagtttctttcactagaaaactagg 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 22039013 - 22039105
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    ||||||||| |||| |||||||||||||| ||| || ||||| |||| |||||||||   ||||| | |||||  |||||||||||| |||||    
T  22039013 ttctagatccaaaattgacctaaaaccacccctgctcgatgagtgaaagagaaagaaaactttgaaaaaagttaaagtttctctcacaaaaaa 22039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 27651840 - 27651744
Alignment:
Q  136 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||| ||||||| |||||||| | ||| |||||| ||||| |||| ||| |||||  ||| ||||||||   || ||||||||||||||||||||||    
T  27651840 ctaggtcaaaaattgacctaacatcacccctcctcgatgagtgaaagaggaagaaaatttagagagaagacagaatttctctcactaaaaaattagg 27651744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 32766421 - 32766309
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctca 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||  ||  ||||| |||||||||| ||  |||| || ||||||||||||||||  ||    
T  32766421 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccctctcaatgaacgaaggagaaaaaattttttagaaagaagttggagtttcttcca 32766322  T
Q  220 ctaaaaaattagg 232  Q
    ||| |||| ||||    
T  32766321 ctagaaaactagg 32766309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 1621719 - 1621805
Alignment:
Q  153 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   ||||||||||||||||||||||||| ||||||    
T  1621719 ctaaaatcacgcctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagggccggct 1621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 9643208 - 9643178
Alignment:
Q  197 gagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  9643208 gagagaagttggagtttctctcactaaaaaa 9643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 47320623 - 47320709
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||||||||| ||| || |||||  ||| ||||| |||   ||  |||||||||| |||||||||||||||||||    
T  47320623 tcaaagaatgacctaaaaccaccccttctcgatgagcgaaagagaaggaaaacttaaagagaagttgaagtttctctcactaaaaaa 47320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 9713786 - 9713697
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||| ||||| ||| |||||| ||||| |||| ||||||||    || |||||||| | |||||||||||||||||||| ||||    
T  9713786 aaaaaaagacataaaatcacccctcctcgatgagtgaaagagaaagagaacttagagagaaggtagagtttctctcactaaaaaactagg 9713697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 18935681 - 18935576
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| ||||||| |||||| ||| ||| |||||| |||||  ||| ||| |||||   || ||||||||   ||||||||||||||||||| |||||     
T  18935681 ttctaggtcaaaaattgaccttaaatcacccctcctcgatgagcgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaacttaggg 18935582  T
Q  234 ccggct 239  Q
    ||||||    
T  18935581 ccggct 18935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 4778650 - 4778532
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  4778650 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 4778551  T
Q  221 taaaaaattaggaccggct 239  Q
    ||||||| |||| ||||||    
T  4778550 taaaaaactagggccggct 4778532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 7646369 - 7646258
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  7646369 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 7646270  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  7646269 tagaaaactagg 7646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 12677498 - 12677616
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||| |||| || |||||| ||||||  |||||||||||| |||| ||||||||||||||||||||||||    
T  12677498 tgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcac 12677597  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  12677598 tagaaaactagggccggct 12677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 7678080 - 7678181
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||| | ||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  7678080 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 7678179  T
Q  221 ta 222  Q
    ||    
T  7678180 ta 7678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 27097620 - 27097725
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||  ||||| |||| ||||     
T  27097620 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactagaaaactaggg 27097719  T
Q  234 ccggct 239  Q
    ||||||    
T  27097720 ccggct 27097725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 1421546 - 1421462
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||| ||||    
T  1421546 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagcgagaagttggagtttctctcactagaaaa 1421462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 7448145 - 7448034
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||||  ||||||||||||||||||||| |||||| |||||| |||||| |||||| |||| |||||||||||||||||||| |||    
T  7448145 tgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaaaaagaaagtttagagagaagttggagtttctcccac 7448046  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  7448045 tagaaaactagg 7448034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 31788353 - 31788242
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||| |||||||||| |  ||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  31788353 tgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctctcctcgatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcac 31788254  T
Q  221 taaaaaattagg 232  Q
    || |||||||||    
T  31788253 tagaaaattagg 31788242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 35220212 - 35220110
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| ||||||||| |||||||||||| ||||   |||||||||||||||||||| |||| |||||| ||||||||||||||||||| |||| ||||     
T  35220212 ttctaggtcaaaaaataacctaaaaccacccctc---gatgaatgaaggagaaagaaagtttagagagaggttggagtttctctcactagaaaactaggg 35220116  T
Q  234 ccggct 239  Q
    ||||||    
T  35220115 ccggct 35220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 4098987 - 4098889
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||||||||||||| |||| | |||| |||||| ||| ||||||||| |||| |||||||||||||||||||| |||||||||| ||||    
T  4098987 ttctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagg 4098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 36943339 - 36943437
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||||||||||| |||||| ||| || ||||||||||||| |||| |||| || |||||||||||||||||| |||| ||||    
T  36943339 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatcaacgaaggagaaagaaagtttagagataaattggagtttctctcactagaaaactagg 36943437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 43397334 - 43397439
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||||||||| ||| || |||||| |||| | |||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  43397334 ttctaggtcaaaaaatgacctaaaaccaccccttctcgatgaacgaagaaaaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 43397433  T
Q  234 ccggct 239  Q
    ||||||    
T  43397434 ccggct 43397439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 18763365 - 18763265
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||| |||||||||  ||||| |||| ||||||| ||||||| |||| ||||||||||||||||||||||||    
T  18763365 tgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgatggatgaaggtgaaagaaagtttagagagaagttggagtttctctcac 18763266  T
Q  221 t 221  Q
    |    
T  18763265 t 18763265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 5428084 - 5428173
Alignment:
Q  135 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 224  Q
    ||||| ||||||| | |||||||||||| |||||| |||||| |||||||||||||  ||| |||||||||||||||||||||| |||||    
T  5428084 tctaggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctctaaa 5428173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 9169482 - 9169566
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 228  Q
    ||||||||||||||||||| |||||| ||| || ||| ||||||||| |||| |||||||||||||||||||| ||||| |||||    
T  9169482 aaaaatgacctaaaaccacccctcctcgataaacgaatgagaaagaaagtttagagagaagttggagtttctcccactagaaaat 9169566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 11985432 - 11985543
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| | |||||||||| |||||||||  ||||| || ||||||| ||||||||| |||| |||||||||||||||||||||||     
T  11985432 tgtagaggggtgattctaggttaaaaaatgacttaaaaccaccactcctcgaagaatgaaagagaaagaaagtttagagagaagttggagtttctctcat 11985531  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  11985532 tagaaaactagg 11985543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 31128974 - 31129056
Alignment:
Q  145 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||| ||| |||||| ||| || ||||||||||||| |||| ||||||||||| ||||| |||||||||||||    
T  31128974 aaaatgacctaaaatcacccctcctcgatcaacgaaggagaaagaaagtttagagagaagttgaagtttttctcactaaaaaa 31129056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 37876813 - 37876893
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttc 214  Q
    |||||| ||||||| |||||||||||||| |||||| |||||| |||| |||||||| |||| ||||||||||||| ||||    
T  37876813 ttctaggtcaaaaattgacctaaaaccacccctcctcgatgaacgaagaagaaagaaagtttagagagaagttggaatttc 37876893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 29279794 - 29279883
Alignment:
Q  142 caaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||| | | | |||| ||||||||||| |||||||| | || |||||||||||||||||||||||| | |||||||||    
T  29279794 caaaaaatgacctaaaatcgctcatcctcgatgaatgaag-agaaagaaaggttagagagaagttggagtttctctcacaagaaaattagg 29279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 42698928 - 42698987
Alignment:
Q  172 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 231  Q
    |||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  42698928 atgaataaaggagaaagaaagtttagaaagaagttgaagtttctctcactaaaaaattag 42698987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 41694493 - 41694407
Alignment:
Q  140 atcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||||||||||||||||| ||| || || ||||| ||||||||| |||| | || |||||||| || ||||||||| ||||||||    
T  41694493 atcaaaaaatgacctaaaactacatcttctcgatgagtgaaggagagagaaagcttagagagaaggtgaagtttctcttactaaaaa 41694407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 24461323 - 24461238
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 219  Q
    |||||| |||||||||||||||||||||| ||||||| |||| |||| |||||  ||   || |||||||||||||||||| ||||    
T  24461323 ttctaggtcaaaaaatgacctaaaaccacccctccttaatgagtgaaagagaataaaaacttagagagaagttggagtttcactca 24461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 8809156 - 8809073
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||| ||||||||||   |||| || | ||||||||||||||| |||| |||||||||| |||||||||  |||||||||    
T  8809156 aaaaatgatctaaaaccacctgtcctcgacgtatgaaggagaaagaaagtttagagagaagttagagtttctcctactaaaaaa 8809073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 36691732 - 36691657
Alignment:
Q  153 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaa 227  Q
    |||||||||| ||||||  || || |||||||||||||||||| || || ||||||||||||||||||||| ||||    
T  36691732 ctaaaaccacccctcctcaattaaggaaggagaaagaaggtttagaaagaaagttggagtttctctcactagaaaa 36691657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 4904358 - 4904444
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||| |||||||||  ||| |  || || ||| ||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  4904358 tcaaaaaatgacataaaaccaccactcttcaataaacgaatgagaaagaaagtttagagagaagttgaagtttctcttactaaaaaa 4904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 23933869 - 23933911
Alignment:
Q  197 gagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  23933869 gagagaaggtggagttactctcactaaaaaattaggaccggct 23933911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 32448843 - 32448929
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||||||||| |||||| ||||| |||| || ||  ||  |||  ||||||||| ||||||||||||||||||||    
T  32448843 tcaaataatgacctaaaaccacccctcctcgatgagtgaaagaaaagaaaaatttaaagagaagttagagtttctctcactaaaaaa 32448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 36175666 - 36175712
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||||||||||||||||  || |||||||||||||||||||||||    
T  36175666 aaaaatgacctaaaaccacctcttcttgatgaatgaaggagaaagaa 36175712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 38445063 - 38444982
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 203  Q
    ||||||||| |  |||||||||||||| ||||||||||||||  ||| | |||||| ||||||||||||| |||| |||||||    
T  38445063 tgtagaggggtgattctagatcaaaaa-tgacctaaaaccacctctcatcgatgaacgaaggagaaagaaagtttagagagaa 38444982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 28871987 - 28872069
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||||| | |||| |||||||||| |||||| ||   || |||||||  ||||||||||||||||||||||    
T  28871987 aaaaaaagacctaaaaccactcatcctcgatgaatgaatgagaaaaaa--attagagagaatgtggagtttctctcactaaaaaa 28872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 37416576 - 37416493
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||||||||||| ||| |||| | || ||||||| || ||| ||  ||| ||||||||||| ||||||||||| |||||||    
T  37416576 aaaaatgacctaaaatcacccctcatcgacgaatgaaagataaaaaaaatttagagagaagttgaagtttctctcattaaaaaa 37416493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 18107951 - 18108044
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| ||||||||||||||||||||||   ||||  ||||||||| |||||||||   || |||||||  |||| ||||||| ||| |||||    
T  18107951 ttctaggtcaaaaaatgacctaaaaccaccattcctcaatgaatgaaagagaaagaaaacttagagagaaagtggactttctcttacttaaaaa 18108044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 25509291 - 25509379
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||   |||| |||||| |||| |||||||| | || |||| ||||| |||||| |||||||| |||||||||    
T  25509291 aaaaaaagacctaaaaccaccattcctcgatgaacgaagaagaaagaaag-ttagagaaaagtttgagtttttctcactagaaaattagg 25509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 4042230 - 4042278
Alignment:
Q  172 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||| ||| |||||| || |||| ||||||||||||||||||||||||    
T  4042230 atgaaggaatgagaaaaaaagtttagagagaagttggagtttctctcac 4042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 15379 - 15261
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| ||||||||||||    
T  15379 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacgaaggagaaagaaagtttagagagaagttgaagtttctctcac 15280  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  15279 tagaaaactagggccggct 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 19404956 - 19405062
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||| ||  |||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  19404956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagatttagagagaagttggagtttctctcac 19405055  T
Q  221 taaaaaa 227  Q
    |||||||    
T  19405056 taaaaaa 19405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 42978484 - 42978391
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| ||||    
T  42978484 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaa 42978391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 9450352 - 9450450
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| |||||||||||||||||||||  |||||| |||||| ||||||||||||| ||||  | ||||||||||||||||||||||| |||||||||    
T  9450352 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttaaaaagaagttggagtttctctcactagaaaattagg 9450450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 12141530 - 12141615
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||||||||||||||||||| |||| | |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  12141530 tcaaaaaatgacctaaaaccacccctcttcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaaaa 12141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 8013667 - 8013778
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||||||  ||| |||||||| |||| ||||||||||| ||||||||||||    
T  8013667 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaagaagaaagaaagtttagagagaagttgaagtttctctcac 8013766  T
Q  221 taaaaaattagg 232  Q
    ||||||| ||||    
T  8013767 taaaaaactagg 8013778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 37837660 - 37837758
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||||||||| || |||| |||||||||||||||||||||||    
T  37837660 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaataaagtttagagagaagttggagtttctctca 37837758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 30757021 - 30757134
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||| |||||||||  ||| ||||||||||| |||||||| |||    
T  30757021 tgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaagaaaatttagagagaagttgaagtttctcccac 30757120  T
Q  221 taaaaaattaggac 234  Q
    ||||||| ||||||    
T  30757121 taaaaaactaggac 30757134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 48061291 - 48061206
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    ||||||||||||||||||||||  ||||| |||||| |||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  48061291 tcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggataaagaaagtttagagagaagttggagtttctctctctaaaaa 48061206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 34899809 - 34899912
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| | ||   | |||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  34899809 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcatc---ggtgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 34899905  T
Q  221 taaaaaa 227  Q
    |||||||    
T  34899906 taaaaaa 34899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 48317014 - 48317114
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| || ||||||||||||||||||| ||||||||||||| ||||||||||| |  ||| |||||||||| |||||||| ||||    
T  48317014 tgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagcaaatttagagagaagttagagtttctttcac 48317113  T
Q  221 t 221  Q
    |    
T  48317114 t 48317114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 4529948 - 4529857
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||||||||  || |||||||| || |||||||||||||| |||| ||||    
T  4529948 tcaaaaaatgacctaaaatcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctcactagaaaactagg 4529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 19296767 - 19296656
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| |||||| ||| ||   || ||| |||||||||||||||| |||    
T  19296767 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggacaaaaaaaaattagagggaagttggagtttctcccac 19296668  T
Q  221 taaaaaattagg 232  Q
    ||||||| ||||    
T  19296667 taaaaaactagg 19296656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 39171794 - 39171905
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||||||||||| |||||| |||||| |||||| |||| |||||||| |||| |||| | |||||||||| ||||||    
T  39171794 tgtagaggggtgattctaggtcaaaaaatgacctacaaccacccctcctcgatgaacgaagaagaaagaaagtttagagatacgttggagtttatctcac 39171893  T
Q  221 taaaaaattagg 232  Q
    || |||| ||||    
T  39171894 tagaaaactagg 39171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 47590180 - 47590085
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    ||||||||||||||| ||| ||||||  ||||| ||| |||||||||  ||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  47590180 aaaaatgacctaaaatcacccctcctctatgaacgaatgagaaagaaaatttagagagaagttggaatttctctcactaaaaaacttggaccggct 47590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 13797133 - 13797251
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| | |||||||||||||||||||  | |||| |||||| ||| |||||||||  |||  |||||||||| ||||||||||||    
T  13797133 tgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagagaagttgaagtttctctcac 13797232  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||||||||||    
T  13797233 tagaaaactaggaccggct 13797251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 39329017 - 39329113
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||| |||||||| |||| |||||| ||||||  |||||||||||| |||| || | ||||| ||||||||||||||| ||||||||| ||||||    
T  39329017 aaaaaaagacctaaacccactcctcctcgatgaacaaaggagaaagaaagtttagaaaaaagtttgagtttctctcactagaaaattagggccggct 39329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 25287403 - 25287498
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 236  Q
    ||||| ||| || |||||||||  ||| | || |||||||||||||||||  |||  |||||||||  ||||||||||||||||||||||||||||    
T  25287403 tcaaataataacttaaaaccacctctcttcgacgaatgaaggagaaagaaaatttatagagaagttatagtttctctcactaaaaaattaggaccg 25287498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 5078608 - 5078702
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 228  Q
    |||||| |||||||||||||||||| ||| | ||||| |||| |||| || |||||    || ||||||||||| ||||||||||||||||||||    
T  5078608 ttctaggtcaaaaaatgacctaaaatcacccttccttaatgagtgaaagataaagagaacttagagagaagttgaagtttctctcactaaaaaat 5078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 40993050 - 40992960
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||||||||||||||||| || | |||| |||||| |||| ||||  || |||| |||||||||||||||||||| ||||| |||| ||||    
T  40993050 tcaaaaaatgacctaaaactac-catcctcgatgaacgaagaagaactaaagtttagagagaagttggagtttctcccactagaaaactagg 40992960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 3224642 - 3224725
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||||||||||||||||| | || | || || |||| |||||||||  ||| || | |||||||| |||||||||||||||||    
T  3224642 aaaaatgacctaaaaccacccatcttcgaagagtgaaagagaaagaaaatttagaaaaaagttggaatttctctcactaaaaaa 3224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 45350445 - 45350500
Alignment:
Q  172 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    ||||| |||||||||| || |||| ||||||||||| |||||||||||||| ||||    
T  45350445 atgaacgaaggagaaaaaaagtttagagagaagttgaagtttctctcactagaaaa 45350500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9916011 - 9915941
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 213  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9916011 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9923923 - 9923853
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 213  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9923923 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 24350737 - 24350695
Alignment:
Q  198 agagaagttggagtttctctcactaa-aaaattaggaccggct 239  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  24350737 agagaagttggagtttctctcactaaaaaaattagggccggct 24350695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 19404857 - 19404886
Alignment:
Q  21 agaacgccgcacttagacgacgaaatcact 50  Q
    ||||||||||||||||||||||||||||||    
T  19404857 agaacgccgcacttagacgacgaaatcact 19404886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 24770120 - 24770055
Alignment:
Q  145 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggag 210  Q
    |||||||||||||| ||| ||  || |||||| ||| ||||||||| |||| ||||||||||||||    
T  24770120 aaaatgacctaaaatcaccccgtctcgatgaacgaatgagaaagaaagtttagagagaagttggag 24770055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 22087193 - 22087137
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 190  Q
    |||||| ||||||||||||| |||||||  |||| | ||| ||||||||||||||||    
T  22087193 ttctaggtcaaaaaatgaccaaaaaccatccctcttcgataaatgaaggagaaagaa 22087137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 2174 - 2279
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| |||||| |||||| |||||||||| || |||| |||||||||||||||||||||| |    
T  2174 tgtagaggggtgattctagatcaaaaaatgacttaaaaccactcctcctcgatgaacgaaggagaaaaaaagtttagagagaagttggagtttctctctc 2273  T
Q  221 taaaaa 226  Q
    ||||||    
T  2274 taaaaa 2279  T

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Target: scaffold0026 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 72079 - 72184
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 233  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||     
T  72079 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctcccactagaaaactaggg 72178  T
Q  234 ccggct 239  Q
    ||||||    
T  72179 ccggct 72184  T

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Target: scaffold0445 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 1218 - 1120
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||| ||||||||||||||||||||||  ||||| |||||| |||||||||||||  ||| ||||||||||| |||||| |||||||||||| ||||    
T  1218 ttctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaaatttagagagaagttgaagtttcactcactaaaaaactagg 1120  T

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Target: scaffold0219 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 15053 - 15141
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 222  Q
    |||||| ||||||||| ||||||  |||||| |||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  15053 ttctaggtcaaaaaataacctaaccccacacatcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctcacta 15141  T

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Target: scaffold0017 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 32970 - 33061
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    |||||||||||||||||||||| |||||| ||| || |||| |||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  32970 tcaaaaaatgacctaaaaccactcctcctcgataaacgaagaagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 33061  T

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Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 50673 - 50555
Alignment:
Q  121 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 220  Q
    ||||||||| |  |||||| ||||||| |||||||||| ||| ||||||  ||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  50673 tgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 50574  T
Q  221 taaaaaattaggaccggct 239  Q
    || |||| |||| ||||||    
T  50573 tagaaaactagggccggct 50555  T

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Target: scaffold0262 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 2041 - 2121
Alignment:
Q  143 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 223  Q
    |||||| ||||||||| |||| |||||  |||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  2041 aaaaaaagacctaaaaacacatctcctcaatgaatgaagaagaaagaaagttttgaaagaagttggagtttctctcactaa 2121  T

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Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 19261 - 19348
Alignment:
Q  144 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 232  Q
    ||||| ||| ||||||||| |||||| ||||| |||| |||||||||  ||  ||||||||||||||||||||||||||||||||||||    
T  19261 aaaaacgacataaaaccacccctcctcgatgagtgaaagagaaagaaaatta-gagagaagttggagtttctctcactaaaaaattagg 19348  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 58301 - 58387
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 227  Q
    |||||||||||||||||||||| |||||| || || |||| || || |||   || |||||||||||||||||||||||||||||||    
T  58301 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaagttggagtttctctcactaaaaaa 58387  T

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Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 7591 - 7500
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 226  Q
    |||||| |||||||||||||||||||||  |||||| ||||||| ||||||||||||   || ||||||||  |||||||| |||||||||||    
T  7591 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaagaaaacttagagagaag-cggagtttccctcactaaaaa 7500  T

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Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 10742 - 10672
Alignment:
Q  145 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 215  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| | |||| |||||||||| ||||||||    
T  10742 aaaatgacctaaaaccacctctcctcgatgaatgaaggaggaagcaagtttagagagaagttagagtttct 10672  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 25551 - 25649
Alignment:
Q  141 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 239  Q
    |||||||||||| ||||||||| |||||| |||||| ||||||||||     ||| |||| |||||| |||||||||||||| |||| |||| ||||||    
T  25551 tcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaaatttttttagagaaaagttgaagtttctctcactagaaaactagggccggct 25649  T

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Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 12790 - 12721
Alignment:
Q  134 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 203  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  12790 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 12721  T

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