View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6914_low_51 (Length: 250)

Name: NF6914_low_51
Description: NF6914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6914_low_51
NF6914_low_51
[»] chr2 (13 HSPs)
chr2 (1-240)||(19243518-19243757)
chr2 (108-169)||(15370240-15370301)
chr2 (95-153)||(32615997-32616055)
chr2 (55-120)||(14209240-14209305)
chr2 (99-163)||(22878181-22878245)
chr2 (55-93)||(2416276-2416314)
chr2 (99-173)||(15120266-15120340)
chr2 (110-163)||(13866972-13867025)
chr2 (99-176)||(30331835-30331911)
chr2 (108-153)||(43199927-43199972)
chr2 (109-153)||(17443541-17443585)
chr2 (101-161)||(25800594-25800654)
chr2 (109-153)||(42852635-42852679)
[»] chr1 (17 HSPs)
chr1 (95-163)||(4549464-4549532)
chr1 (110-177)||(24460310-24460377)
chr1 (95-176)||(5157151-5157232)
chr1 (95-175)||(23373224-23373304)
chr1 (99-160)||(27807198-27807259)
chr1 (108-163)||(6292584-6292639)
chr1 (99-169)||(32515358-32515428)
chr1 (115-153)||(44815236-44815274)
chr1 (24-92)||(46499924-46499991)
chr1 (111-162)||(5924108-5924159)
chr1 (108-171)||(33723297-33723360)
chr1 (99-153)||(9507314-9507368)
chr1 (141-178)||(19605215-19605252)
chr1 (95-168)||(33976257-33976330)
chr1 (109-173)||(3597194-3597258)
chr1 (100-160)||(12564425-12564485)
chr1 (99-143)||(41638251-41638295)
[»] chr8 (15 HSPs)
chr8 (114-176)||(43368610-43368672)
chr8 (101-176)||(14926892-14926967)
chr8 (99-152)||(24326114-24326167)
chr8 (109-168)||(37353090-37353149)
chr8 (98-169)||(38602410-38602480)
chr8 (110-165)||(43208077-43208132)
chr8 (35-93)||(4558742-4558799)
chr8 (55-93)||(42237491-42237529)
chr8 (110-171)||(778483-778544)
chr8 (99-152)||(8535989-8536042)
chr8 (99-144)||(26410363-26410408)
chr8 (56-93)||(35374442-35374479)
chr8 (109-153)||(2364393-2364437)
chr8 (99-163)||(2487931-2487995)
chr8 (86-163)||(12361262-12361341)
[»] chr7 (16 HSPs)
chr7 (95-175)||(1418498-1418578)
chr7 (95-163)||(30751598-30751666)
chr7 (111-174)||(29363603-29363666)
chr7 (95-153)||(48157053-48157111)
chr7 (84-163)||(5620075-5620154)
chr7 (108-163)||(9210914-9210968)
chr7 (85-159)||(31002808-31002882)
chr7 (99-153)||(36598289-36598343)
chr7 (99-153)||(43854974-43855028)
chr7 (126-163)||(2727281-2727318)
chr7 (44-93)||(48157189-48157237)
chr7 (103-163)||(8427100-8427160)
chr7 (99-163)||(22387819-22387883)
chr7 (112-168)||(28691754-28691810)
chr7 (111-163)||(31751682-31751734)
chr7 (101-153)||(37064147-37064199)
[»] chr4 (16 HSPs)
chr4 (99-161)||(18628478-18628540)
chr4 (108-172)||(15173217-15173280)
chr4 (55-93)||(51630074-51630112)
chr4 (95-163)||(1017107-1017175)
chr4 (96-160)||(2811551-2811615)
chr4 (99-163)||(46860001-46860065)
chr4 (109-168)||(50298608-50298667)
chr4 (86-161)||(54277248-54277323)
chr4 (99-153)||(2996656-2996710)
chr4 (110-163)||(1312935-1312988)
chr4 (86-163)||(25896854-25896931)
chr4 (110-153)||(2236915-2236956)
chr4 (99-143)||(22471357-22471401)
chr4 (128-168)||(27043748-27043788)
chr4 (95-163)||(41097180-41097247)
chr4 (99-169)||(53943689-53943756)
[»] chr6 (13 HSPs)
chr6 (100-153)||(32171551-32171604)
chr6 (86-153)||(32848529-32848596)
chr6 (99-165)||(33067241-33067307)
chr6 (86-153)||(8420130-8420197)
chr6 (28-82)||(31624195-31624248)
chr6 (126-168)||(33068520-33068562)
chr6 (44-81)||(2112153-2112190)
chr6 (110-159)||(3180996-3181045)
chr6 (36-93)||(9093625-9093681)
chr6 (99-168)||(24333021-24333090)
chr6 (99-144)||(26177246-26177291)
chr6 (97-153)||(24973960-24974016)
chr6 (108-176)||(35070377-35070445)
[»] chr5 (11 HSPs)
chr5 (35-93)||(41819556-41819613)
chr5 (123-168)||(34205348-34205393)
chr5 (129-169)||(17369316-17369356)
chr5 (97-176)||(4855776-4855855)
chr5 (24-91)||(9202819-9202885)
chr5 (86-169)||(28586683-28586766)
chr5 (33-91)||(7674590-7674647)
chr5 (99-161)||(10303879-10303941)
chr5 (99-153)||(15015927-15015980)
chr5 (87-168)||(42181003-42181084)
chr5 (108-168)||(31208564-31208624)
[»] chr3 (12 HSPs)
chr3 (109-163)||(21872218-21872272)
chr3 (35-92)||(42808923-42808979)
chr3 (99-160)||(45590734-45590795)
chr3 (128-175)||(16072952-16072999)
chr3 (110-153)||(22667497-22667540)
chr3 (110-153)||(22724136-22724179)
chr3 (35-93)||(32703082-32703139)
chr3 (36-89)||(15304420-15304472)
chr3 (35-92)||(42809245-42809301)
chr3 (127-163)||(2081006-2081042)
chr3 (99-163)||(20194956-20195020)
chr3 (90-162)||(33965412-33965484)
[»] scaffold0024 (1 HSPs)
scaffold0024 (86-151)||(27646-27711)


Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19243518 - 19243757
Alignment:
Q  1 ctgtttggataaggagcttaatgaagtgcttgtatataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagctacttctat 100  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  19243518 ctgtttggatacggagcttaattaagtgcttgtatataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagctgtttctat 19243617  T
Q  101 aagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaaatcaaaactaaactgttaggttag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19243618 aagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggccctaaaatcaaaactaaactgttaggttag 19243717  T
Q  201 gtctacgcgcctgcttgttgacatgcttacgatttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19243718 gtctacgcgcctgcttgttgacatgcttacgatttctctg 19243757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 15370301 - 15370240
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  15370301 cccaaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacagg 15370240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 32615997 - 32616055
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||| | |||||||||||| |||||||||||||||  ||||||||||||||    
T  32615997 ttctataagctcccacaaacagtctcacaaatgcttatgtcagctgataagttcaaata 32616055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 14209240 - 14209305
Alignment:
Q  55 aaaagataaaataaatttaaattgttttgatataagctacttctataagctcgcccaaacagtctc 120  Q
    ||||||||||||||||| ||| |||||| |||||||||| ||| |||||||| ||||| |||||||    
T  14209240 aaaagataaaataaattcaaactgttttcatataagctatttccataagctctcccaagcagtctc 14209305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 22878181 - 22878245
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||| || |||||||||||||| || ||||||||||||| |||||| ||||||| |||||||||    
T  22878181 ataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatcca 22878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 2416276 - 2416314
Alignment:
Q  55 aaaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||||||| || |||||||||||||||||||||||    
T  2416276 aaaagataaaatgaagttaaattgttttgatataagcta 2416314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 15120266 - 15120340
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcct 173  Q
    |||||||| |||||||||  ||| || || |||||  |||||||||||||||||| ||||||||| |||| ||||    
T  15120266 ataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataagtcaatccaaacagatcct 15120340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 13866972 - 13867025
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||||||| || || ||||| ||||||||||| ||||||| |||||||||    
T  13866972 caaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatcca 13867025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 30331835 - 30331911
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    ||||| || |||||||||||||| |||  |||||||||||||||||| | ||||| ||||||||| ||| | ||||||    
T  30331835 ataagttctcccaaacagtctcacaaaa-cttatgtcagtagataagctgaaataagtcaatccaaacaagccctaaa 30331911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 43199927 - 43199972
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||||| || ||||||| | ||||||||||||||||||    
T  43199927 cccaaacagtctcacaagtgcttatatgagtagataagttcaaata 43199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 17443585 - 17443541
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||||||||| || ||||||| |||||| |||||||||||||    
T  17443585 ccaaacagtctcacaagtgcttatatcagtatataagttcaaata 17443541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 25800654 - 25800594
Alignment:
Q  101 aagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatc 161  Q
    |||||| ||||||||||||||  | |||| | || |||||||||||||||||| |||||||    
T  25800654 aagctctcccaaacagtctcacgagtgctcacgttagtagataagttcaaataagtcaatc 25800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 42852679 - 42852635
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||||||||| || |||||||| ||| |||||||||||||||    
T  42852679 ccaaacagtctcacaagtgcttatgccagcagataagttcaaata 42852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 4549532 - 4549464
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||| | |||||||    
T  4549532 ttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatcca 4549464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 24460377 - 24460310
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaaa 177  Q
    |||||||||||| || |||| ||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  24460377 caaacagtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaacaggccctaaaa 24460310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 5157151 - 5157232
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    |||||||||||| |||||||||| ||| || || ||||||| ||||||||||||||||| ||||||||| | || |||||||    
T  5157151 ttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaatagatcctaaa 5157232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 23373304 - 23373224
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaa 175  Q
    |||||||||||| |||||||| ||||| || ||||||| |||||||| ||||||||||| |||||| || ||||| |||||    
T  23373304 ttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaacaggccctaa 23373224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 27807198 - 27807259
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaat 160  Q
    |||||||| | |||||||||| | ||||||||||||||||||| ||||||||||| ||||||    
T  27807198 ataagctctctcaaacagtcttacaaatgcttatgtcagtagaaaagttcaaataagtcaat 27807259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 6292584 - 6292639
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| ||||| || |||||||||||||||||||| ||||||| |||||||||    
T  6292584 cccaaacaatctcaaaagtgcttatgtcagtagataagctcaaataagtcaatcca 6292639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 32515428 - 32515358
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    |||||||| |||||||||||||| || ||||||||| |||||||||  |||||||||  |||||| |||||    
T  32515428 ataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacagg 32515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 44815274 - 44815236
Alignment:
Q  115 agtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  44815274 agtctcacaaatgcttatgtcagtagataagttcaaata 44815236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 46499991 - 46499924
Alignment:
Q  24 aagtgcttgtatataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagct 92  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||| | |||||||||| || ||||||    
T  46499991 aagtgcttatctataagctatttctataa-gaaaagataaaataaagtcaaattgtttttatttaagct 46499924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 5924108 - 5924159
Alignment:
Q  111 aaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcc 162  Q
    ||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  5924108 aaacagtcttacaaatgcgtatgtcagtaaataagttcaaataagtcaatcc 5924159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 33723360 - 33723297
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtc 171  Q
    ||||| |||||||| || || |||||  |||||||||||||||||| ||||||||| |||||||    
T  33723360 cccaagcagtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacaggtc 33723297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 9507314 - 9507368
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| |||||||||||||| |||||| ||||  |||||||||| |||||||    
T  9507314 ataagctctcccaaacagtctcacaaatgcctatgctagtagataagctcaaata 9507368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 19605215 - 19605252
Alignment:
Q  141 ataagttcaaatatgtcaatccatacaggtcctaaaat 178  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  19605215 ataagctcaaataagtcaatccatacaggtcctaaaat 19605252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 33976257 - 33976330
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||||||  |||||| |||||| || |||| |||||| || ||||| ||||||| ||||||||| ||||    
T  33976257 ttctataagctcaaccaaactgtctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaacag 33976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 3597258 - 3597194
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcct 173  Q
    ||||||||||||| || || |||| ||| |||||||  ||||||| ||||||||| |||||||||    
T  3597258 ccaaacagtctcacaagtggttatatcattagataacctcaaataagtcaatccaaacaggtcct 3597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 12564485 - 12564425
Alignment:
Q  100 taagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaat 160  Q
    ||||||| ||||||||||| || || ||||||| |||||| ||||| ||||||| ||||||    
T  12564485 taagctctcccaaacagtcacacaagtgcttatatcagtatataagctcaaataagtcaat 12564425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 41638295 - 41638251
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagata 143  Q
    |||| ||| |||||||||||||| ||||||||||| |||||||||    
T  41638295 ataatctctcccaaacagtctcacaaatgcttatgccagtagata 41638251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 43368672 - 43368610
Alignment:
Q  114 cagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  43368672 cagtctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacaggtcctaaa 43368610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 14926967 - 14926892
Alignment:
Q  101 aagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    |||||| | |||||||||||| || |||||||| ||||| ||||||||||||| ||||||||| ||| | ||||||    
T  14926967 aagctctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaacaagccctaaa 14926892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 24326114 - 24326167
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaat 152  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||    
T  24326114 ataagctctcccaaacagtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 37353149 - 37353090
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||||||| || |||||||||||||||||| ||||| ||| ||| ||||| ||||    
T  37353149 ccaaacagtctcacaagtgcttatgtcagtagataggttcagataagtcgatccaaacag 37353090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 38602410 - 38602480
Alignment:
Q  98 tataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    |||||| || ||||||||| |||| |||  |||||||||||||||||| ||||||| ||||||||| |||||    
T  38602410 tataagttctcccaaacagcctcacaaaa-cttatgtcagtagataagctcaaataagtcaatccaaacagg 38602480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 43208132 - 43208077
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccata 165  Q
    ||||||||||||| | ||  |||||||||||||||||||||||| |||||| ||||    
T  43208132 caaacagtctcagtagtgtgtatgtcagtagataagttcaaataagtcaattcata 43208077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 4558742 - 4558799
Alignment:
Q  35 tataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||| |||||||||| ||||||||||||||| ||||||| |||| ||||| ||||    
T  4558742 tataagctatttctataat-aaaagataaaataaagttaaattattttcatatatgcta 4558799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 42237529 - 42237491
Alignment:
Q  55 aaaagataaaataaatttaaattgttttgatataagcta 93  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  42237529 aaaagataaaataaagttaaattgttttcatataagcta 42237491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 778483 - 778544
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtc 171  Q
    |||||||||||| || ||||||| |||||| |||||| |||||| ||||| ||| |||||||    
T  778483 caaacagtctcacaagtgcttatttcagtaaataagtacaaataagtcaaaccaaacaggtc 778544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 8536042 - 8535989
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaat 152  Q
    |||| ||| |||||||||||||| || | ||||||||||||||||| |||||||    
T  8536042 ataaactctcccaaacagtctcacaagtacttatgtcagtagataaattcaaat 8535989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 26410363 - 26410408
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataa 144  Q
    |||||||| ||||| ||||||||||| ||||||||||||| |||||    
T  26410363 ataagctctcccaagcagtctcagaagtgcttatgtcagttgataa 26410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 35374479 - 35374442
Alignment:
Q  56 aaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  35374479 aaagataaaataaagttaaattgttttcatataagcta 35374442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 2364437 - 2364393
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||||||||| || | |||||||||| |||||||||||||||    
T  2364437 ccaaacagtctcacaagtacttatgtcagaagataagttcaaata 2364393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 2487995 - 2487931
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||| || |||||||||||||| || ||||||||||||||||| |  ||||||| | |||||||    
T  2487995 ataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatcca 2487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 12361262 - 12361341
Alignment:
Q  86 ataagctacttctataag--ctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| |||||||||  ||| | |||| ||||| | || | ||||| |||||||||||||||||||| |||||||||    
T  12361262 ataagctatttctataagatctctctcaaagagtctaacaagtacttatatcagtagataagttcaaataagtcaatcca 12361341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 1418498 - 1418578
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaa 175  Q
    |||||||||||| | ||||||| |||| || |||||||| ||||||||||| ||||||| ||||||||| ||| |||||||    
T  1418498 ttctataagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataagtcaatccaaacaagtcctaa 1418578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 30751598 - 30751666
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||||||| ||||||||||| || || |||||||||||||||||||||| ||||| || ||||||    
T  30751598 ttctataagctctcccaaacagtcgcacaagtgcttatgtcagtagataagtttaaataagttaatcca 30751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 29363603 - 29363666
Alignment:
Q  111 aaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtccta 174  Q
    ||||||||||| || ||||||||| |||||||||||||||||| | ||||||| |||| |||||    
T  29363603 aaacagtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaacagatccta 29363666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 48157111 - 48157053
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||| |||||||||||||| |||||||||  |||||| ||||| |||||||    
T  48157111 ttctataagctctcccaaacagtctcacaaatgcttaaatcagtaaataagctcaaata 48157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 5620154 - 5620075
Alignment:
Q  84 atataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||| ||||||||||| ||| | |||||||| ||| ||   |||||| |||||||| |||||||||| |||||||||    
T  5620154 atataagttacttctataatctctctcaaacagtatcacaagaacttatgccagtagatgagttcaaataagtcaatcca 5620075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 9210914 - 9210968
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||| |||||||||    
T  9210914 cccaaacagtctcagaaaa-cttatatcagtagataagctcaaataagtcaatcca 9210968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 31002882 - 31002808
Alignment:
Q  85 tataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaa 159  Q
    ||||||||  || |||||||||  ||||||||||||| || |||||||| ||||||||||| |||| || |||||    
T  31002882 tataagctgtttttataagctcatccaaacagtctcacaattgcttatgacagtagataagctcaattaagtcaa 31002808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 36598343 - 36598289
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| | |||||| ||||| || ||||||||||||||| ||||||||||||    
T  36598343 ataagctctctcaaacaatctcacaattgcttatgtcagtagttaagttcaaata 36598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 43855028 - 43854974
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| |||||| ||| ||  |||||||||||| ||||||||||||||||||    
T  43855028 ataagctctcccaaatagtgtcgcaaatgcttatgttagtagataagttcaaata 43854974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 2727318 - 2727281
Alignment:
Q  126 tgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  2727318 tgcttatgtcagtagataagttcaaataaatcaatcca 2727281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 48157237 - 48157189
Alignment:
Q  44 tttctataatgaaaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||||| ||||||||||||||| | |||||||||| ||||||||||    
T  48157237 tttctataat-aaaagataaaataaagtgaaattgttttaatataagcta 48157189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 8427100 - 8427160
Alignment:
Q  103 gctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||| |||||||||||||| || | ||||||| |||||||||| |||||||  ||||||||    
T  8427100 gctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatcca 8427160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 22387883 - 22387819
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| |||||||||||||| |  || ||||||||||| |||||||| | || |||||||||    
T  22387883 ataagctctcccaaacagtctcacacgtgtttatgtcagtaaataagttctagtaagtcaatcca 22387819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 28691810 - 28691754
Alignment:
Q  112 aacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    |||||||||| |||||||||||| || ||||||  ||||||| ||||||||| ||||    
T  28691810 aacagtctcacaaatgcttatgttagcagataaactcaaataagtcaatccaaacag 28691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 31751734 - 31751682
Alignment:
Q  111 aaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||||| |||||||||||| | || ||||||| ||||| |||||||||    
T  31751734 aaacagtctcacaaatgcttatgtgactacataagtttaaataagtcaatcca 31751682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 37064199 - 37064147
Alignment:
Q  101 aagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||| | ||||| |||||| || ||||||||||| ||||||||||||||||    
T  37064199 aagctctcacaaaccgtctcacaagtgcttatgtcactagataagttcaaata 37064147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 18628540 - 18628478
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatc 161  Q
    |||||||| |||||||||||||| || || ||||||||||||||||| ||||||| |||||||    
T  18628540 ataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaatacgtcaatc 18628478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 15173280 - 15173217
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcc 172  Q
    |||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| || |||||    
T  15173280 cccaaacagtctcacaaaa-cttatgtcagtagataagttcaaataagtcaatccaaactggtcc 15173217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 51630074 - 51630112
Alignment:
Q  55 aaaagataaaataaatttaaattgttttgatataagcta 93  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  51630074 aaaagataaaataaagttaaattgttttgatataagcta 51630112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 1017107 - 1017175
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||| ||  ||||||||||||| || || |||||||||||||| || ||||||| |||||||||    
T  1017107 ttctataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatcca 1017175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 2811551 - 2811615
Alignment:
Q  96 tctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaat 160  Q
    ||||||| ||| | |||||||||||| ||||||||||| ||||||||||  ||||||| ||||||    
T  2811551 tctataatctctctcaaacagtctcataaatgcttatgccagtagataacctcaaataagtcaat 2811615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 46860001 - 46860065
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| | |||||||| ||| || ||||||||| | |||||||||||||||| |||||||||    
T  46860001 ataagctctctcaaacagtttcacaagtgcttatgtgaatagataagttcaaataagtcaatcca 46860065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 50298608 - 50298667
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||||||| || |||||||||||||||||||| | |||||  ||||| |||||||    
T  50298608 ccaaacagtctcacaagtgcttatgtcagtagataagctaaaataaatcaattcatacag 50298667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 54277323 - 54277248
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatc 161  Q
    |||||||  |||| ||||||| | | |||||||||| || || |||||||| |||||||||||||||| |||||||    
T  54277323 ataagctgtttctgtaagctctcgctaacagtctcataagtgtttatgtcactagataagttcaaataagtcaatc 54277248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 2996656 - 2996710
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| | |||||||||||| || ||||||||||| || |||||||||||||    
T  2996656 ataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttcaaata 2996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 1312935 - 1312988
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||| || | ||||||||| |||||||||||| |||||| |||||||||    
T  1312935 caaacagtcacacacatgcttatgccagtagataagtgcaaataagtcaatcca 1312988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 25896854 - 25896931
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| |||||||||||| || ||||||||||| || |||| |||  |||||||||  ||||||| || ||||||    
T  25896854 ataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcca 25896931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 2236956 - 2236915
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||| |||  ||||||||||||||||||||||||||    
T  2236956 caaacagtctcataaa--cttatgtcagtagataagttcaaata 2236915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 22471357 - 22471401
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagata 143  Q
    ||||| || |||||||||||||| || ||||||||||||||||||    
T  22471357 ataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 27043788 - 27043748
Alignment:
Q  128 cttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    |||||||||||||||||| ||||||| ||||||||| ||||    
T  27043788 cttatgtcagtagataagctcaaataagtcaatccaaacag 27043748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 41097247 - 41097180
Alignment:
Q  95 ttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||||||| ||| |||||||||| || ||||| || || ||||||||||||||||  ||||||||    
T  41097247 ttctataagctctcccgaacagtctcacaagtgcttttgaca-tagataagttcaaataactcaatcca 41097180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 53943689 - 53943756
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    |||||||| |||||| ||| ||| || |||||||   ||||||||||||||||||  ||||||||||||||    
T  53943689 ataagctctcccaaatagtttcataagtgcttat---agtagataagttcaaataattcaatccatacagg 53943756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 32171551 - 32171604
Alignment:
Q  100 taagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||    
T  32171551 taagctctcccaaccagtctcacaaatgcttatgtcagtaaataagttcaaata 32171604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 32848596 - 32848529
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| ||| |||||||| ||| ||| | |||| ||||||||||||||||||||||| |||||||    
T  32848596 ataagctatttccataagctctccccaacggactcacaaatgcttatgtcagtagataagctcaaata 32848529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 33067241 - 33067307
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccata 165  Q
    |||||||| ||||| |||||| | || ||||||||||||||||||| |||| ||| |||||||||||    
T  33067241 ataagctctcccaatcagtcttacaagtgcttatgtcagtagataaattcacataggtcaatccata 33067307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 8420197 - 8420130
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||| |||||||||||| | | |||||||||| || || |||||||| |||||||| |||||||    
T  8420197 ataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaata 8420130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 31624195 - 31624248
Alignment:
Q  28 gcttgtatataagctttttctataatgaaaagataaaataaatttaaattgtttt 82  Q
    |||||| |||||||| |||||||||  |||||||||||||| |||||||||||||    
T  31624195 gcttgtgtataagctatttctataac-aaaagataaaataagtttaaattgtttt 31624248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 33068562 - 33068520
Alignment:
Q  126 tgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    |||||||||||||||||||||||||||| | ||||||| ||||    
T  33068562 tgcttatgtcagtagataagttcaaataagccaatccaaacag 33068520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 2112153 - 2112190
Alignment:
Q  44 tttctataatgaaaagataaaataaatttaaattgttt 81  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  2112153 tttctataataaaaagataaaataaagttaaattgttt 2112190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 3181045 - 3180996
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaa 159  Q
    |||| ||||||| || |||||||||| ||||||||||||||||| |||||    
T  3181045 caaatagtctcacaagtgcttatgtctgtagataagttcaaataagtcaa 3180996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 9093681 - 9093625
Alignment:
Q  36 ataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagcta 93  Q
    ||||||| |||||||| | ||||||||||||||| ||||||||||||  |||||||||    
T  9093681 ataagctatttctata-tcaaaagataaaataaagttaaattgttttcgtataagcta 9093625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 24333021 - 24333090
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||  ||||||||| | | ||||||||||||||||| ||||  | ||||||||||||||| ||||    
T  24333021 ataagctccaccaaacagtatgacaaatgcttatgtcagtacataaactgaaatatgtcaatccaaacag 24333090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 26177246 - 26177291
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataa 144  Q
    |||||||| |||||||||||| ||||||| ||||||| ||||||||    
T  26177246 ataagctctcccaaacagtctgagaaatgtttatgtcggtagataa 26177291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 24974016 - 24973960
Alignment:
Q  97 ctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||||||||  ||||||| ||| | || |||||||||||| |||||||||||||||    
T  24974016 ctataagctctaccaaacaatcttacaagtgcttatgtcagcagataagttcaaata 24973960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 35070445 - 35070377
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    ||||||||||| || || ||||||||| |||||||||| ||||||| |  |||||| ||| ||||||||    
T  35070445 cccaaacagtcccacaagtgcttatgttagtagataagctcaaataagaaaatccaaacaagtcctaaa 35070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 41819556 - 41819613
Alignment:
Q  35 tataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||  |||||||||    
T  41819556 tataagctatttctataatggaa-gataaaataaatttaaattgtttttgtataagcta 41819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 34205348 - 34205393
Alignment:
Q  123 aaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  34205348 aaatgcttatgtcagtaaataagttcaaataagtcaatccaaacag 34205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 17369316 - 17369356
Alignment:
Q  129 ttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  17369316 ttatgtcagtagataagttcaaataagtcaatccaaacagg 17369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 4855776 - 4855855
Alignment:
Q  97 ctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaaa 176  Q
    |||||||||| | |||||||||||| || || ||| |||| || ||||| ||||||| ||||||| ||||||||| ||||    
T  4855776 ctataagctctctcaaacagtctcacaagtgtttaagtcattatataagctcaaataagtcaatcaatacaggtcttaaa 4855855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 9202885 - 9202819
Alignment:
Q  24 aagtgcttgtatataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagc 91  Q
    |||||||| |||||||||| ||||| ||   ||||||||||||||| |||||||||||| ||||||||    
T  9202885 aagtgcttatatataagctatttctgtagc-aaaagataaaataaagttaaattgttttcatataagc 9202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 28586766 - 28586683
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacagg 169  Q
    |||||||| ||| |||||||| |||||||||| ||| |||||||||||  | ||||  |||||||||  ||||||||| |||||    
T  28586766 ataagctatttccataagctctcccaaacagtttcacaaatgcttatgctattagactagttcaaattagtcaatccaaacagg 28586683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 7674590 - 7674647
Alignment:
Q  33 tatataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagc 91  Q
    |||||||||| ||||||||   ||||||||||||||||||||||||||||  |||||||    
T  7674590 tatataagctatttctatacc-aaaagataaaataaatttaaattgttttcttataagc 7674647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 10303879 - 10303941
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatc 161  Q
    |||||||| | |||| | ||||| ||||||||||||| ||||||||| ||||||||| |||||    
T  10303879 ataagctctctcaaataatctcacaaatgcttatgtccgtagataagctcaaatatgccaatc 10303941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 15015927 - 15015980
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    ||||| || |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  15015927 ataagttctcccaaacagtctcacaaa-gcttatgtcagtagataagctcaaata 15015980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 42181084 - 42181003
Alignment:
Q  87 taagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||| ||| |||||||| ||||||  |||||| |||||| ||||  |||| ||||||||||||  ||||||||| ||||    
T  42181084 taagctatttccataagctctcccaaattgtctcacaaatgcatatgctagtaaataagttcaaattagtcaatccaaacag 42181003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 31208564 - 31208624
Alignment:
Q  108 cccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatccatacag 168  Q
    ||||||||||||||    ||||||||||||||| | |||||||||| ||||||||| ||||    
T  31208564 cccaaacagtctcacgggtgcttatgtcagtagttcagttcaaataagtcaatccaaacag 31208624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 21872272 - 21872218
Alignment:
Q  109 ccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    ||||||||||||| || |||||||||||||||||||| ||||||| || ||||||    
T  21872272 ccaaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatcca 21872218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 42808923 - 42808979
Alignment:
Q  35 tataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagct 92  Q
    |||||||| |||||||||  ||||||||||||||| |||||||||||| |||||||||    
T  42808923 tataagctgtttctataac-aaaagataaaataaagttaaattgtttttatataagct 42808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 45590734 - 45590795
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaat 160  Q
    |||||||| |||||||||||||| || ||||||||  |||||||||||||||| | ||||||    
T  45590734 ataagctctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaat 45590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 16072999 - 16072952
Alignment:
Q  128 cttatgtcagtagataagttcaaatatgtcaatccatacaggtcctaa 175  Q
    ||||||||| |||||||| ||||||| ||||||||| |||||||||||    
T  16072999 cttatgtcattagataagctcaaataagtcaatccaaacaggtcctaa 16072952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 22667497 - 22667540
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||| || |||||||||||||||||||| |||||||    
T  22667497 caaacagtctcacaagtgcttatgtcagtagataagctcaaata 22667540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 22724136 - 22724179
Alignment:
Q  110 caaacagtctcagaaatgcttatgtcagtagataagttcaaata 153  Q
    |||||||||||| || |||||||||||||||||||| |||||||    
T  22724136 caaacagtctcacaagtgcttatgtcagtagataagctcaaata 22724179  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 32703082 - 32703139
Alignment:
Q  35 tataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagcta 93  Q
    |||||||| ||||||| || ||||||||||||||| | |||||||||| ||||||||||    
T  32703082 tataagctatttctattat-aaaagataaaataaactcaaattgttttcatataagcta 32703139  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  36 ataagctttttctataatgaaaagataaaataaatttaaattgttttgatataa 89  Q
    ||||||| |||||||||  ||||||||||||||| |||||||||||| ||||||    
T  15304472 ataagctatttctataac-aaaagataaaataaagttaaattgttttcatataa 15304420  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 42809245 - 42809301
Alignment:
Q  35 tataagctttttctataatgaaaagataaaataaatttaaattgttttgatataagct 92  Q
    |||||||| |||||||||  ||||||||||||| | |||||||||||| |||||||||    
T  42809245 tataagctatttctataac-aaaagataaaatatagttaaattgttttcatataagct 42809301  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 2081042 - 2081006
Alignment:
Q  127 gcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||||| |||||||||||||||| |||||||||    
T  2081042 gcttatgtcaatagataagttcaaataagtcaatcca 2081006  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 20195020 - 20194956
Alignment:
Q  99 ataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 163  Q
    |||||||| | |||||||||||| || ||||||||  || |||||||||||||||  ||||||||    
T  20195020 ataagctctcacaaacagtctcacaactgcttatgcaagaagataagttcaaataaatcaatcca 20194956  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 33965484 - 33965412
Alignment:
Q  90 gctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcc 162  Q
    |||| ||| ||||| || || ||||||||||| |  || ||| ||||||||||||| ||||||||||||||||    
T  33965484 gctatttccataaggtctcctaaacagtctcacatgtgtttaagtcagtagataagctcaaatatgtcaatcc 33965412  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 27646 - 27711
Alignment:
Q  86 ataagctacttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaa 151  Q
    |||||||| ||| |||||||| ||||||||||||||||| | | ||||||||||||| || |||||    
T  27646 ataagctatttccataagctctcccaaacagtctcagaagtacatatgtcagtagatcagctcaaa 27711  T

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